core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote	cenote	CDS	53824	54324	GCA_001054475.1	JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475.1_JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475_1_25	GCA_001054475_1_25@C5	1	501	GCA_001054475_1_25_55	GCA_001054475_1_25_55	-	62530	.	PRK10304	non-heme ferritin. 	MLSANVIKLLNDQMNLEFYSSNLYLQMSAWCEQNGFEGAAKFLSEHAAEEMQHMRKLFTYLNETGALAVITAIEAPAHEYKSLKEIIELTYEHEKLITSKINELVGKTFEEKDYSAFNFLQWYVAEQHEEEKLFSGILDKLNLLGEDGKGLFLIDKDLANLAGQTA*	mmseqs_cdd	nonviral_gene	C5	8707	53824	62531	GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote_CDS_0001	persistent	direct	high	500	0.998	GCA_001054475.1_01016
GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote	cenote	CDS	54345	54830	GCA_001054475.1	JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475.1_JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475_1_25	GCA_001054475_1_25@C5	522	1007	GCA_001054475_1_25_56	GCA_001054475_1_25_56	-	62530	.	PRK10304	non-heme ferritin. 	MLNKAIADKLNEQINLEFYSSNVYLQMSSWCSKHGYEGAAAFLLRHADEELEHMQKLFKYVSETSGMPLLGKIDAPKNDYKSLKEVFETTLEHEKLVTSKINELVEVTFANKDYSTFNFLQWYVAEQHEEEKLFNSIIDKFNLLGEDGRSLYFIDRDLATL*	mmseqs_cdd	nonviral_gene	C5	8707	53824	62531	GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote_CDS_0002	persistent	direct	high	485	0.998	GCA_001054475.1_01017
GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote	cenote	CDS	55753	56889	GCA_001054475.1	JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475.1_JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475_1_25	GCA_001054475_1_25@C5	1930	3066	GCA_001054475_1_25_57	GCA_001054475_1_25_57	-	62530	.	PDB:5WQ8_J	Type-II-secretion-system-protein	MKLQRNILCFFSCFLFGVAQAKNVDFKLEAVPLPKAVGMIYDEVLEKPYMLDPKLAADTRLISFHTKEDQDFNQFITRYFENMNIKTYEKNGVVYLAHIEPKPPKIIKHSFVYNPVHRDTEYLAQFLQGEGQVSASGDKLVYYGTAEDIARIKSVLKSVDTPSREVVVTGYVFEVQDIAKEGSGINLLAKLLSGKLGINIGYKQNYENFITVNAGNLDAMIELFRTDERFQVVSSPTLRVKSGSKGNFSVGSDVPVLSNVTYQDGRPIQSIEYRSSGVIFDIQPTIKSNAIDLKINQQLSNFVKTDTGVNQSPTLIKRDIVTDVTLKSGDIVVLGGLAENKLTEGETGFSFLPKGFLTGKSKSNTKTDIVILLQVKMI*	common_virus_hmm	common_virus	C5	8707	53824	62531	GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote_CDS_0003	shell	direct	high	1136	0.999	GCA_001054475.1_01019
GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote	cenote	CDS	56886	57929	GCA_001054475.1	JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475.1_JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475_1_25	GCA_001054475_1_25@C5	3063	4106	GCA_001054475_1_25_58	GCA_001054475_1_25_58	-	62530	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MAISAYVGLPGHGKSYEVVKSVIIPAIASGRRVVSNIYGLNKQLIEEYCLSKDKKLSPDNLGELVIVDNDLCLGVDFYPYKNAIDNNIETFCKAGDLIIIDEAWRFFPKKEKINDNHFSFLSEHRHFTDSNGISCDFVILNQDLTNLQRELVERIETTFKMTKLVAAGLKSRYRVDVFSGNKCWKTAKTASYQEKYDKAIFPLYKSYETDNGRELVTDKRQNALNKSSIKYFAVFAVLIVGFSLYKLISFFTPPEQDTPKVEQTLSENKEIEAITLNNQPQLQVTLPLSTQWRITGELQKSGKAFVILADNQGNLRLEPRSNFNFTGRMLEGIIDNQRVNYYSGVKQ*	hallmark_hmm	common_virus	C5	8707	53824	62531	GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote_CDS_0004	shell	direct	high	1043	0.999	GCA_001054475.1_01020
GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote	cenote	CDS	57938	58231	GCA_001054475.1	JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475.1_JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475_1_25	GCA_001054475_1_25@C5	4115	4408	GCA_001054475_1_25_59	GCA_001054475_1_25_59	-	62530	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MGSLILRLFSGFLGFAFKGIVAKFFVFFALFFITTEFIPVVIELFLPKEIPNLNALFSGLPDSIWYFLSILQIPTGITLVISAMLARFIIRRLPIIG*	hallmark_hmm	common_virus	C5	8707	53824	62531	GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote_CDS_0005	shell	direct	high	293	0.997	GCA_001054475.1_01021
GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote	cenote	CDS	58241	59899	GCA_001054475.1	JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475.1_JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475_1_25	GCA_001054475_1_25@C5	4418	6076	GCA_001054475_1_25_60	GCA_001054475_1_25_60	-	62530	.	.	hypothetical protein	MGFCLFSFGYGMRFSRGAWLKWIVIFSFIFNVVLSYKANANPLLARVVLAEVFEGIVARRAAVSVVGRAAANDAAYLAANEAAIGLRAAQTYRALGTVAANDATFAVGATSTLRNAKDISWVALALTSGAITLKDLNVESNSKIGVAFEPTAVPLADGRYAINVNGETKVVNAMPSPKDPIIYQYSKEKKQISENSQDIYKSDVLDKHYKYFNTLRTGEYAQSNSIEKLAEYIAQEEWGGKGEENYSEVDIEGKKYRYLRSQTTVENRYLRHQKIGNMIYPEVRQIFTEKQLNYDFEPILEGNTGSQIVYSFNPPKPSDYEVSTRVNNLTYIRFEENQHWVGDFPTTSSDKQLNSVADLDLNLYTKPLTATQLALLYNALLMSAASQPGYIGVPFSASDPITSAEVQAQLNKLGKTATFADLFAKAGVGNQLSIGTSNQPQPIPQPTPNPGTRPGEEKDDKDIDDEPKYPELESPTARQILEPFNQFFPQLKNFHLADRAVQCPTWEGHIDYLNIDVRLDKHCQYVEQNKAVITSLMLLIWGIVALRILLSA*	.	hypothetical_protein	C5	8707	53824	62531	GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote_CDS_0006	shell	direct	high	1658	0.999	GCA_001054475.1_01022
GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote	cenote	CDS	59951	60181	GCA_001054475.1	JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475.1_JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475_1_25	GCA_001054475_1_25@C5	6128	6358	GCA_001054475_1_25_61	GCA_001054475_1_25_61	-	62530	.	PFAM:PF10389.8	virion-structural-protein	MSNLKKYLIAAVVLGSSVGAFAGSESAQKVQIDVSGMLNQVDFSTVIAGIIAAGGVLIGPRIAKMGIRFILGLFGK*	phrogs_hmm	hypothetical_protein	C5	8707	53824	62531	GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote_CDS_0007	shell	direct	high	230	0.996	GCA_001054475.1_01023
GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote	cenote	CDS	60216	60482	GCA_001054475.1	JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475.1_JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475_1_25	GCA_001054475_1_25@C5	6393	6659	GCA_001054475_1_25_62	GCA_001054475_1_25_62	-	62530	.	.	hypothetical protein	MNEEIEITTKFCHPYMSFGGDGCSDVVLKVPRTEAVKLQSVAHSGNENQGFSVGDFFHHTDSFGFSFGLVLIFYLIAKSVGTFLALFK*	.	hypothetical_protein	C5	8707	53824	62531	GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote_CDS_0008	shell	direct	high	266	0.996	GCA_001054475.1_01024
GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote	cenote	CDS	60482	60778	GCA_001054475.1	JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475.1_JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475_1_25	GCA_001054475_1_25@C5	6659	6955	GCA_001054475_1_25_63	GCA_001054475_1_25_63	-	62530	.	PDB:1GVP_A	Rep-protein	MSNQNIEQYLLKVQIFSTSRIDERSGVSEKTGKDWFIRTQEAYIELGGQFPVQIKVPLKKDQVPYSPGNYYVHPTSFKVSGYFDLKVSDIVLVPAIDK*	rep_hall_hmm	common_virus	C5	8707	53824	62531	GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote_CDS_0009	shell	direct	high	296	0.997	GCA_001054475.1_01025
GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote	cenote	CDS	60803	62071	GCA_001054475.1	JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475.1_JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475_1_25	GCA_001054475_1_25@C5	6980	8248	GCA_001054475_1_25_64	GCA_001054475_1_25_64	-	62530	.	PFAM:PF05144.13	Phage-replication-protein	MIDFLKLSIPFKTEHILVCKDGETSFLKETLIEIAKRTGLKLRAGNVTFEIDGDLDVAELSHPYEAIPSHFGSLAMKVFNGSDRMKTPPYIELKASPAKLLQGHNVFGSTNLDVCCFVMLKTFCEALPELYEMTDTENTMIDWIDVTYSAHIPSEMMQKQVISFLQNVRAGQTKKTRYNREYETTAEWNSGSEHRVLKVYLKGAELQKRLSEIQSELKRTPNKQNLLNVLNVLSNPNLIEFSKQCVRFEARLKQRYLDKYRIPRKLCDLIQYQRQYEKQGKSLIKDLWQDAFNDIIQAVGESKMNVYNRDNIQKLLKKQYYTVTPKGNISYAKADRLFGFYKNLLTYGYLETQSEMDRKTFWRHEKDLLAVGLTKAQLQNLKAHERHNIIPLMKLVEIDFSCQRPDWYVEPTLDFVQMQLAA*	rep_hall_hmm	common_virus	C5	8707	53824	62531	GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote_CDS_0010	shell	direct	high	1268	0.999	GCA_001054475.1_01026
GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote	cenote	CDS	62213	62419	GCA_001054475.1	JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475.1_JVSB01000040.1	GCA_001054475.1|JVSB01000040.1	GCA_001054475_1_25	GCA_001054475_1_25@C5	8390	8596	GCA_001054475_1_25_65	GCA_001054475_1_25_65	+	62530	.	.	hypothetical protein	MRKDTSVRVNEMRRNKLEMLAIEISHKSGKLTKMSDIVNHLLDNYLQEAKQDLLHNAENSGKDKTKST*	.	hypothetical_protein	C5	8707	53824	62531	GCA_001054475.1|JVSB01000040.1@region_53825_62531@tool_cenote_CDS_0011	shell	direct	high	206	0.995	GCA_001054475.1_01027
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	52415	52669	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	1	255	GCA_001054475_1_34_48	GCA_001054475_1_34_48	-	95665	.	PFAM:PF10078.8	transcriptional-regulator	MTKLRLSIHSDEYIWLRELLLNRRKELGLSQRAFGEKLGVVHSFIGKVETGDRRLDVFEFIEYCKGLDLDPIQVLREIEEKFRV*	phrogs_hmm	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0001	shell	direct	high	254	0.996	GCA_001054475.1_01486
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	52733	53134	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	319	720	GCA_001054475_1_34_49	GCA_001054475_1_34_49	+	95665	.	PF17500.2	Colicin-K	MSFLSKTLGGLSKAYYIRQFLFGLIFFAFMVVMGYDSYSRTGNPSIFLTNIILGLVCLFLYPYSRFVYESIIEYILGNNAFFVNAVLMLIIKFITMMLCFMFAIFIAPIGLTYLYFYHSKQEKLQNQTQNEKQ*	hhsuite_tools	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0002	shell	direct	high	401	0.998	GCA_001054475.1_01487
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	53195	54166	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	781	1752	GCA_001054475_1_34_50	GCA_001054475_1_34_50	-	95665	.	PRK12681	HTH-type transcriptional regulator CysB. 	MKMQQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERNGKHIKSITPAGKKIVAIARELLVKAQSIKSVANEYTCPNHGVLRIATTNTQARYMLPAVVERFSKQYPDVSLHIHQGSPTQIHDALISGEVDLAITTEAPYLFDDLIQLPCYLWNRSVIVKPDHPLAKVKNLTVEELGKYPLVTYTFGFTGVSDLDYAFNRAGILPNIVFTATDADVIKTYVRLGLGVGIMASMAHTPADKDLVAIDAGHLFRASMTQIAFKHSTFLRNYMYDFIEFFSPHLTRPMVEKAEKLRDNSAVKKLFDNVELDVK*	mmseqs_cdd	nonviral_gene	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0003	persistent	direct	high	971	0.999	GCA_001054475.1_01488
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	54179	55189	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	1765	2775	GCA_001054475_1_34_51	GCA_001054475_1_34_51	-	95665	.	PRK10700	23S rRNA pseudouridine(2605) synthase RluB. 	MKPIQKPVRQEREKQAGKQPHFERKERKNAVNSDIKSPPKAKVAKPSRQSTVEGEKLQKVLARAGQGSRREIEAMIAENRVSVDGKMATLGDRIDVHSGVKVRIDGRIINLQQAQKEVCRVLMYYKPEGELCTRSDPEGRATVFDRLPRLNGARWIAVGRLDINTSGLLLFTTDGELANRLMHPSREVEREYSVRVFGQVDDAMLARLRKGVQLEDGPANFKEIKFAGGVGINQWYDVTLMEGRNREVRRLWESQGIQVSRLIRIRYGNIKLMKGLPRGGWEEMDLENVNYLRELVGLPPETETKLDVTKPRRRPKSGQIRKAVKRYTELSKRYKK*	mmseqs_cdd	nonviral_gene	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0004	persistent	direct	high	1010	0.999	GCA_001054475.1_01489
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	55229	55852	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	2815	3438	GCA_001054475_1_34_52	GCA_001054475_1_34_52	-	95665	.	PRK11630	threonylcarbamoyl-AMP synthase. 	MSQFFYIHPENPQARLINQAVEILRQGGVIVYPTDSGYALGCMIGDKHAMDRIVAIRKLPEGHNFTLVCSDLSELSTYATVSNSAYRLIKNNTPGRYTFILTATKELPRRLMTSKRKTIGLRVPDNQIALDLLNALGEPILSCSLMLPDNEHMTYSDPEEIREYLERQVDLIIHGGYLGQEPTTVVDLTEESPVILREGSGRTAPFI*	mmseqs_cdd	nonviral_gene	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0005	persistent	direct	high	623	0.998	GCA_001054475.1_01490
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	56182	56508	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	3768	4094	GCA_001054475_1_34_53	GCA_001054475_1_34_53	-	95665	.	.	hypothetical protein	MKYISKQIEDIRTGAMSEHHAVTGLQVDYVNNSTFVTIASYVSKAKKDEGKESLSVNTFTIQAVPGWEKIPYEWALGELVKAQPEDFSPETYIGYVNPYMFAGGKVEQ*	.	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0006	shell	direct	high	326	0.997	GCA_001054475.1_01491
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	56670	57455	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	4256	5041	GCA_001054475_1_34_54	GCA_001054475_1_34_54	-	95665	.	.	hypothetical protein	MLKISSEDAINIIDDTYKNYHLRKSGVLYDKDFEINGMTKDCYIPCVGFNSPIIVIHPRGHDYNSKVTYVPVSRNMTNKDYINSEYRNTFGFQIYVWWNLHVNEGIEYYIFDDWQPETAKYGLTLWNEKGEIIYHSDWYRLKLLGMHQLGRAGPSISNDLKIDISKFSNLSNKVGILMPFVRRCMMGGLPGQYLPPAGGHNTFNNYELGEGFFFKDKNTIQYSWVCLSGIDGWWFSWDQIITPPSSFILTVDLDGMPLNYN*	.	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0007	cloud	direct	high	785	0.999	GCA_001054475.1_01492
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	57448	57891	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	5034	5477	GCA_001054475_1_34_55	GCA_001054475_1_34_55	-	95665	.	.	hypothetical protein	MANYGFEVCNADGIIRDKVTSKFARIIAKLHVPLIVAYDYAYQKAGSGSFIVNELLNIPKGYIPFYFISPAELNGCFYPNVKISGNLISWDFYIYDRELFPRNYDKKNGVSDLFGDNPVGFDSTDVAPKRTAIFGGCYINVGICPDA*	.	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0008	cloud	direct	high	443	0.998	GCA_001054475.1_01493
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	57891	61754	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	5477	9340	GCA_001054475_1_34_56	GCA_001054475_1_34_56	-	95665	.	PFAM:PF13550.5	tail-protein	MGGSSKGGGGHTPHEAPDSLRSAQKLRAIGLISLGPIKGPANKWKDTYFDNTPIQNANGVDDNDAASFNFKNTEIQYNLGYQDQKPLEGFEASEREVSVGAEVKQQHPITRSVIDPDVTRLRLTIGINALISQNDQGDTNGTSVDFQILINNTPRGTYQIEGKSSSRFYRSYVIDDLPPRPFTVTVKRVTADSKSQRLQNGTHWVSYTEIIDTKLSYPNMAIVGIKTDSRYNPNFPNINFLLYGRIIKIPTTYDPEARTYAPGLWRGDFKLGWTNNPAWIFYDLITDKLAGLGERIGDFGIDKFMLYEIAKYCDELVDDGYGGKEPRMVSNLWITEQRDAYNVISDMASVFRAIAVWDGTQFTAIQDRPTDPVCLYSQSNVVDGKFSRQYTAGKAIFTAVEVEYADERNLYQKAIEYVADDSMIARYGYNVKKMTAYGCTSRGQAHRYGKWVLETSRLEQCTITFAVGRQGLMHLPGDIIEVADNNYAGKVLGGRVVAISGKKVTLDQPVEIKGESYLNYITTDGLTKIKIKSVDKVNPAIVELDSVPQGLSIFDNWVLKSGVVSTQLYRALGITENDDGSYTITALQHEPQKQAIVDGSASFVPSVTTAHGAGVNKPANADISFGDGGVKLTWTTPTNQGAVKYDIKLYRNGNLYSTHLDLDSPEISFDNLPSGSYTVEIRGKNGLGQLSDPVTRTFEINLNIPRFVTKSLLFAIELDWDLPKTATVGNYTEVWRGATNDISKAVKVATLPYPQNNYVMSGVPLSAEYYFWLRCGDKNDNKGEFTAAVFGEADHNPDNLLNALEGKITKSQLGQELINSIKADINNAVGEEAKTRQTAVAGALAQIAAQAQSSGTAIKNLEKTDQAQAETIKTVTAKAESALSGITAVRQAQAQSDKANAQQINALTAKVGKAESTVSQVSSAVAGLNGKVSSMHTIKTQAIAGGRTAVAGIALGANQDESSVIVMADKFGIVANANDGNVKPVFSVANGQVGIRGDLFVAGSVTRDKLSAGSGGNLLYNPIFANVKNDGLPHGCSWWGSSTARNLRADSKQANDAWGLTYYLPGENQLIFNIDGDSSASGTVAMQSAPVLGNKWYILSAYIGAHRSKAKLTARCHLKEGGYKDFSSEDIIGYSFSGGLSGYTKRAFVKFKAPSDVERITPIFWVISNSNESNKHLRVARPMLEECTEYTTEPSPWNNAGLTEVHGGSIIADTIRGNHIMANQEIRAPRITGGEIDISGNDGILRVGRTGNFLVRASSQNRGLVMNNDQIIVYDDRGNVRVKMGRL*	hallmark_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0009	shell	direct	high	3863	1.0	GCA_001054475.1_01494
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	61814	62401	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	9400	9987	GCA_001054475_1_34_57	GCA_001054475_1_34_57	-	95665	.	PFAM:PF06805.11	tail-assembly-protein-I	MVQVKFYGDLKRFADSPIELEVSNFKELMSGLFTQIKGLRQHIRKGYYKIRVGSKYLSEEQLKTTPIIDLKDGCTVHLTPVVAGAGKGGNVLQIVAGVVLMVIAWYAPPAWGMAATMMGAMGASLTLSGVVGLLTKPPSMSDYSKEGEKKQSTSFSNIKNLTPQGRPIPLLYGKMLTSLVLISQGVETFDDMPTK*	hallmark_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0010	cloud	direct	high	587	0.998	GCA_001054475.1_01495
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	62347	63105	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	9933	10691	GCA_001054475_1_34_58	GCA_001054475_1_34_58	-	95665	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MIDDKLKQEILAHAEQCKPQESCGFVVFDGKQNIYIPCVNISPDPINYFEIAPEEFIDAEEIGKIIALVHSHPSFNDERGLPYLSTADRECQVRLDLDFWLVVDGDIKCFRNVPPLIGRQFENNKQDCRNIVLDSYMLSGIDLDDKSIYPFDWFKSSNLYEEGLQRCGFYKLMQEDDVQLGDIILIQVGADVANHAGVYLGNQMMIHHSEDRLSARVPYNGFWLKHTHSIWRFRDWYKLNFTVILNDLQIAR*	mmseqs_cdd	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0011	cloud	direct	high	758	0.999	GCA_001054475.1_01496
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	63108	63845	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	10694	11431	GCA_001054475_1_34_59	GCA_001054475_1_34_59	-	95665	.	PFAM:PF05100.11	minor-tail-protein-	MPKKLPDKMTALLPELEQGALIELWEIDLRHISSSAEPSTKGELLRFHNGLNQSQVNLWWQGNEYQAYPIKADGFEISGQGPSNRPTLTVSNLYGLVTGIVAHFGQGVGAKVTRRLVYAEHLDAKNFPGGVNPNADPNQEVRSYYIIEQLKSLDDQQATFELASPAETDNAKIPLLMITSDTCIWQYRSAQCGYTGGAVADEFDKPTSDIKKDKCSHCIRGCKLRFGDNAILPFGGFPSTTQYGN*	hallmark_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0012	shell	direct	high	737	0.999	GCA_001054475.1_01497
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	63905	64804	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	11491	12390	GCA_001054475_1_34_60	GCA_001054475_1_34_60	-	95665	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MANQISTQTISFNHQSLVTFKQNGTYYTAMKPICENIGLDWKSQYSRMKRDDVLNSTMVIITIVAEDGKKREMICLPIEYLNGWLFGIDINRCKPEIRDTLIKYKKECYQALHDYWFNGKAERKTTVDDRTGLRNAVNMLVSKKGLIYSDAYHLIHQRFNVESIEDLTLEQLPQAVEYVHKIILEGELITDPELPSSEKKFSFEFTEYELQTVAWACFAFRRNNNLLHELYSPLAAIGSKFAVEARDNAVEYRNTLRRFNEVVKRITVDIEADPETNWRVLKHIRSFNEKIFGKVETTI*	common_virus_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0013	cloud	direct	high	899	0.999	GCA_001054475.1_01498
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	65100	65297	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	12686	12883	GCA_001054475_1_34_61	GCA_001054475_1_34_61	-	95665	.	PFAM:PF07927.11	toxin	MGSGYYDQLIKILKQYGCTFLRQGKGSHEIWNSPITQKPFPVAYTITNRHTANGILKQAGIDSKI*	phrogs_hmm	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0014	cloud	direct	high	197	0.995	GCA_001054475.1_01500
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	65300	65986	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	12886	13572	GCA_001054475_1_34_62	GCA_001054475_1_34_62	-	95665	.	.	hypothetical protein	MSNKKCNVFTSNFGTLPLRFTLKDGELFVSKSDLTKIFYEFYPSDYRYIVEELMNKGITQIIGDKSDVVSVVIGESKIGAAIHFHAVGNLLHFCSELIDVDDEIMRSAAFQASTFTTWYIGTLSNANSYFGITIEDTLMSVKKRLDKINPPYIVEVMYDVEDNIPAWIGTCDKLHLVTEGRTYEELQQRVWEIAPEMHELQGYGSESDNIRLAFIQTESHADFQRLEM*	.	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0015	cloud	direct	high	686	0.999	GCA_001054475.1_01501
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	66227	66430	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	13813	14016	GCA_001054475_1_34_63	GCA_001054475_1_34_63	-	95665	.	.	hypothetical protein	MCVFYLSDIQRVFDIRSGKDVGDIAEYFSQLNQSEDKKKSNNPPIGKILVVAFILFFIAYIFLFTKN*	.	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0016	.	unmatched_CDS	none	0	0	.
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	66462	66833	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	14048	14419	GCA_001054475_1_34_64	GCA_001054475_1_34_64	-	95665	.	7TXX_A	Bam complex, outer membrane biogenesis	MKKLLSITLFSVILSGCVYSSNYESGARIDETKVQEIVKGKTSEQQIVQWFGEPQFKTVLNDKDTKYVYTHTESSASAQAFTMNTTMSSKQTTLDVLIRDGVVLNFALQKSDMAPKMTHNTKL*	hhsuite_tools	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0017	cloud	direct	high	371	0.997	GCA_001054475.1_01502
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	66904	67230	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	14490	14816	GCA_001054475_1_34_65	GCA_001054475_1_34_65	-	95665	.	PFAM:PF05939.12	minor-tail-protein	MEKFTFKVNLNSPVSYEPNIKSIKFGNGYEQVIQDGINHNLRKYQGLTIAVNKDKGREILAFLNRHGGYKKFQWECPTGETIFVRCKTWTHTPHWAVDEFSLNFEEVL*	hallmark_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0018	cloud	direct	high	326	0.997	GCA_001054475.1_01503
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	67230	69581	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	14816	17167	GCA_001054475_1_34_66	GCA_001054475_1_34_66	-	95665	.	PFAM:PF06791.12	tail-length-tape-measure-protein	MQVGEIHFEVDMDTSKLMEATGKVDQAMESVEKSTKKAEKGFKNVENQVNKTTQAIRNSTGDMGKFGSVLKRLGIAVADGNLDVKELATAIGGLGFAFGGLAGVAVAAGSAIVANFISRLSSSKSEVDNLKSALNDLDKVIKFSESGVAGLSNEYAFLAKSNSTLAQNLKQAAINEFTFKVRNAKDAITEIAKEQSSWFTGAAGGQVSVENMGKSLANLKITTDDYNTALKQTGYASDEMGRMISSNITATVTHLSKEFAISADEAFKFGKKLAEAGENPTPERVNELITYLNTLKGSTSEGEKALGEFRNKLIDSATTIAKVTEYLKELKGEMGALASAAQNSNFESMKRSLEQQKIALTQGAAAAKQYAIEHANLNDEQKEILVAMSNENAKLEEQKKAREKAAKAAESEGKKSESAHRQVAEQLVRLEEQYKVAQARQQGFNIEAVKMEARMRLGAAATEAQKKKVEELAVAMYSLSTVAKNFAALQAQQSPVIALEQQYQQQMQQLEEYKTLYPQHIEEAEAVRSSIEDQYRKQRLDAQWDEWKQSSDGAKMFGDAVEAMAQGATGALAGIMSGTMSAREAFQSLANVVLNSVIGSIVEMGMAQVKSMIMGQAAAKAAVASQMAEAAVLTAAFTPAATMVSLATQGANAVGAQAAITSTAAVAKAAAITGRKNGGAVSANQMYRVAENGQPELYQAKNGMQYMIPGSSGRVYSNKDMRNSTSGPQGGVTVIVNQTNHFSESESAVGNEQNLAKQLGDQIKSAVRTELTAQMRSGGMLSR*	hallmark_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0019	cloud	direct	high	2351	1.0	GCA_001054475.1_01504
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	69584	70255	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	17170	17841	GCA_001054475_1_34_67	GCA_001054475_1_34_67	-	95665	.	pfam19759	Family of unknown function (DUF6246). This family of proteins found in bacteria and viruses is functionally uncharacterized. Proteins in this family are typically between 205 and 235 amino acids in length.	MQPITEIGEMMITTKQKSYFLKPSFKNIYHLGNSREIVRIYAELHGQEIKDAAQKILTSKSPVFQNYALKKLNSPIFGRKILANAMNVIACCCDDDTDPLIGYWVAGKGGVKYRKGALSIEQIILLAQSLMEHGIIGRAKLDLPPPSESKNNYSDEFNIIEYISLARTHFCMTREEAENLTMTELQELLKSQMPKKKESLFTEEEYNAIMDEYEREKAKAIGD*	mmseqs_cdd	nonviral_gene	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0020	cloud	direct	high	671	0.999	GCA_001054475.1_01505
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	70308	70787	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	17894	18373	GCA_001054475_1_34_68	GCA_001054475_1_34_68	-	95665	.	PDB:5A21_H	major-tail-protein	MGQAQTIDTSKMVGRSVVLEYANQDAKPQDAEWKAAGAMKTKSWDFSPNTVTSEADDAGGFPESLVTNSDFSISGEGEWRQRDKEGELGINALVALYVKAIKERKQPFVWVRLKYGTMTIIGKMIITALSSEAATNDLVTFSIEFKVGDASTLEITTTA*	common_virus_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0021	cloud	direct	high	479	0.998	GCA_001054475.1_01506
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	70790	71164	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	18376	18750	GCA_001054475_1_34_69	GCA_001054475_1_34_69	-	95665	.	PDB:5A21_G	tail-completion-protein	MISFVKALKAWIEKSGLFQGYDIQLYQWEDKKGGPYVVIQSNGGGSQISTLGSEHYLLVSLIASKAMGFTIEAKAIELINYALSNPVSNFGYIENTGGIPQPIFTTDNRMILRLQFRIIYTKEE*	hallmark_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0022	cloud	direct	high	374	0.997	GCA_001054475.1_01507
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	71161	71529	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	18747	19115	GCA_001054475_1_34_70	GCA_001054475_1_34_70	-	95665	.	PFAM:PF11114.7	Minor-capsid-protein	MGITINGIAQAKRQLAEVIGETASVKANRAMFRILHIVAPLAAKYTPIDTSTLINSQYSEVMVNGAILTGRIGYSANYAIYVHDPNVKQIFRKPGAKKEFLSSAFKESESAFEGIIKEEMGL*	hallmark_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0023	cloud	direct	high	368	0.997	GCA_001054475.1_01508
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	71529	71876	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	19115	19462	GCA_001054475_1_34_71	GCA_001054475_1_34_71	-	95665	.	PFAM:PF10665.8	Minor-capsid-protein	MSSTANWSYTAQATIWRCLGRNEDGILTFDRPVVIKCDYGMNARKGSLDIGRERVIKNTIWTEYGKASVGDYLLIGKSSEADPISAGAEEIIHIQRFADTFERNADDYALFTGGD*	hallmark_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0024	cloud	direct	high	347	0.997	GCA_001054475.1_01509
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	71879	72250	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	19465	19836	GCA_001054475_1_34_72	GCA_001054475_1_34_72	-	95665	.	CDD:cd08053	head-to-tail-adaptor	MAVQIEIEDAESMLSSLGFAPPDTLLELYLAQANSLSEKFANADYMEATQKLIMLYLVAIFAISSGARRIASESSASGASRSFNYADDVAKLKAAIKGLDPLGIADDLLPQDKKTGLFVVVEG*	hallmark_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0025	cloud	direct	high	371	0.997	GCA_001054475.1_01510
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	72254	72451	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	19840	20037	GCA_001054475_1_34_73	GCA_001054475_1_34_73	-	95665	.	.	hypothetical protein	MKLIKVIKRGLYGVVDGELLALPLGMELKVDEVPEAYIGRVEVLNEADGELEVATGKINKKSKGE*	.	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0026	cloud	direct	high	197	0.995	GCA_001054475.1_01511
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	72493	73551	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	20079	21137	GCA_001054475_1_34_74	GCA_001054475_1_34_74	-	95665	.	PDB:5WK1_D	Major-Capsid-Protein	MNRIVFNKELVTNSAQVKQAWEQLLLQRQVFNVNQQNLANTYQNSLAVNQAALVDKEYWREVDSITTRVFRDDQGNPILNDLLSLGSSISIGKTVAMYRVSSDAGVVSRSMSGQVPESMDKVIYDQYGDPIPIFSTGYGREWREWQGMQTENIDAMSDDQEAATAALRANMAQYVLLGDENLKVANFSAKGITNHENTNQINLGSSGGLNIDLSTADGDKLIAFFTGDFAKVLDDNLVGEKVKVWVSPEINRNLDRPYSNANGFKEGTVKDYILRYGRVDSIEPTFALKGNHFVAYVRNQQYIKTRIAAPVGTFLIPRQNPFDNYNSVVWSAFGLQIKRDFNGKSKVFNAKG*	hallmark_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0027	cloud	direct	high	1058	0.999	GCA_001054475.1_01512
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	73561	73998	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	21147	21584	GCA_001054475_1_34_75	GCA_001054475_1_34_75	-	95665	.	PDB:5WK1_L	Capsid-Stabilizing-Protein	MAKLRYHTIIAGPARKNDPQTIDAPTAEAIQPGALVFLDAGKLKKHATAGKSTQALVMQTNYIAGGDIRNDVPLGATGVAVICEQDVDYYVRVKQGESLKVGDKLTSNGDGTLKKAGASDEAIFIARETYTVASDGVELVKVRKA*	hallmark_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0028	cloud	direct	high	437	0.998	GCA_001054475.1_01513
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	73998	75359	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	21584	22945	GCA_001054475_1_34_76	GCA_001054475_1_34_76	-	95665	.	PFAM:PF09979.8	head-maturation-protease	MKKNNINVLSVLNSRNITEETIDGEVHIVIKGVVPLVDDVVMNGGLYPAAEIDKSYATLDGNAMPLGHPVIDGKYVSASDVRAVNKHHIGAWARNARKENGKVLVDMCINKRFAESTDGGKRLLERLDDLTNNAEAKPIHVSTGLILNKKDDSGTSKGKKYNWVATNMFFDHIAILLDQPGAATPDDGVGIFVNSDGANLDVENVDLGTAADCRKEGWLNKVKFYLSVNSDLAFEEISRALYELVNKQSGGNYKAWIESVYPKYFIYEYDGKKYKQPYFIGDDNQIELTGERVEVVRRVGYEEVKTNGEQNSMKEKIIAALNAAGVKVDGLNDDELLTAYNELQAKPKDEKKPKDGKPEEKPKDDELEEKIKKAVNAALAPITAKLEANQAEELAKKRAAVKAHFGLDDSAVNALEGEALNGLYAKTINPNGINGAMGALNADDDLLNMEAPE*	phrogs_hmm	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0029	cloud	direct	high	1361	0.999	GCA_001054475.1_01514
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	75346	76218	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	22932	23804	GCA_001054475_1_34_77	GCA_001054475_1_34_77	-	95665	.	PFAM:PF06152.10	minor-capsid-protein	MGQEIAKSFKRIDQIFKQIKIEVRQLLDSSLTPRFKTNALEEITSTDLAELLETIQRILDRNLLSGAEDGGQLWIDAFIDTATKKGTQSAVTDLTLQSETYRNSRNLGSILFNPQYMKTLSIAHTANYATWKGVSAAVRKELAEIITEAIFNGDNVKVTARSIKDRLNVSNRRAKLIAQTEQLAAYRRAEWAEAEEARKELGLNTKLLHFSALKPTTRLTHAARHGKCFDVDEVKEWYSKDGNRFNCYCKQSVIVLNKDGKSDIEPLLKSLSDERENWVGALRKKRNEEK*	hallmark_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0030	cloud	direct	high	872	0.999	GCA_001054475.1_01515
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	76235	77626	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	23821	25212	GCA_001054475_1_34_78	GCA_001054475_1_34_78	-	95665	.	PDB:4ZJN_A	Portal-protein	MNIEKQRQDFLATIYGLGNQKRRTLWAECGYPQNLSFRHYYKAYTRNSVGFAAVTRLSDGCWVDVPTIVEGAKGNESNKTSAWEKRADKLFKKLWKSIKEADKRNLVGQYSALIIHVREEGGAKWESELLPGSLAKLEELALVKLIPVWQEQLTVAEYQTDLNKEDYGEPVYYQFNESAVGKSKKGRSIKIHKSRIILLNEGGDDNQPETGVPLLEPGYNKLLDLEKTSGGSAEGFLKNASRQLSIKMSDNVDLRELKRQAEAMGYNDVVGAINDQIQRLNNGIDSALITQEGDASVLSVAAVDPTSTWTVAANEFAASIQIPFTILFGQQTGRLASDEDKSDWANRCNGRRNGFLSEVITQILERFWTVGIIPPPKSGEVTISWSDLLAPSERDKIANAKELATVATTSQSAYGMSVIKPNEIREVLGYEPLKDDEMPPTVKEEIDPLDYQQEDKTPTDTEK*	hallmark_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0031	cloud	direct	high	1391	0.999	GCA_001054475.1_01516
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	77627	78850	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	25213	26436	GCA_001054475_1_34_79	GCA_001054475_1_34_79	-	95665	.	PDB:5OE8_A	Large-Terminase	MELEIQTPRWFLPFIQPCRYKGVKGGRGSGKSHTVAEAQVERAIIDPNYRLVCIREIQKSLKFSSKALIESKIRQFGVSHLFDITMNEIKRVDGEGIMIFQGMQDHTADSIKSLEGFDCAWVEEAQNLSYRSLQLLRPTIRKSGSEIWFTWNPDQESDAVDEFFNSAIANQADGFTLAHVNFDQNPFLPDELLKEMEYDRKYNPATFGHVWLGEYNIKSDAQIFAGKFTIDEFSPKEDWHGPYQGLDFGFAQDPTAAVRCWVHNDELYVEHEAGKIGLELDDTAPFLMKNIPDFEKYVERADSARPESISFLRRHGLGRIEAVSKWSGSVEDGIEHIKSYKRVVIHPRCENTAREFRLYSYKVDKKSGDILPVVLDQNNHYIDALRYALNPLIQTKNAAGLLFSSRG*	hallmark_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0032	cloud	direct	high	1223	0.999	GCA_001054475.1_01517
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	78825	79232	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	26411	26818	GCA_001054475_1_34_80	GCA_001054475_1_34_80	-	95665	.	PFAM:PF07141.10	terminase-small-subunit	MTEQKEKNKGGRPQKNLTGEQLVQVEALAAFLTIEQIADYFEITKPTFHAICERQPEVFLRYKKGRSNAVESIAKSLIQQAREGNLSAQIFYLKTQGGWRETNNVDLTSSDGSMTPKTIIRKVVDPKDGTGDSNA*	phrogs_hmm	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0033	cloud	direct	high	407	0.998	GCA_001054475.1_01518
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	79614	80132	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	27200	27718	GCA_001054475_1_34_81	GCA_001054475_1_34_81	-	95665	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MQILKAPFFGTEIVVVEYDNKPYVPMKPICENIGLAWHAQFERLKRKEVLSSGIRIIRTPSNGGEQESVCLPLHYLNGWLFGIDTNRVKPELKEKLIRYQKECYEVLWDYWTTGTTRRDEIQERLNRLLEDEGKSRANGSIAGKLLNQRKQEKAHFEAELAKLKQMDLFLDI*	common_virus_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0034	cloud	direct	high	518	0.998	GCA_001054475.1_01519
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	80258	80482	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	27844	28068	GCA_001054475_1_34_82	GCA_001054475_1_34_82	-	95665	.	.	hypothetical protein	MTMLLSGCTNKITTKTEYIYPPQAFLTPCIKTPFTGSTYGEAVEHLIIVQGERDMCASQITNINKWINRTKNDK*	.	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0035	cloud	ambiguous	low	28	0.124	GCA_001054475.1_01520
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	80454	80774	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	28040	28360	GCA_001054475_1_34_83	GCA_001054475_1_34_83	-	95665	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MVNKSTLIYLAVLASLCGWIWYQHGAINDLRAKNQAQASLIAEQEKVNQSLKDTIEVERQAVEQQRAINDEIKQATQDKVQIVRKIIKSQPCYNTRIYDDAIERLH*	mmseqs_cdd	nonviral_gene	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0036	cloud	direct	high	320	0.997	GCA_001054475.1_01520
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	80788	81381	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	28374	28967	GCA_001054475_1_34_84	GCA_001054475_1_34_84	-	95665	.	PDB:3WH1_A	Chitinase-	MTMIIPETTFNKVFPKAIKGVYQAISKHIDLAGCFNKQQQAMFLAQCGHETAGFTTFSENLNYSADGLMRVFRKYFPNLNIARQYERKPEKIASRVYASRMGNGPEETMDGWNYRGRGLIQITGKDNYIRFAHWLGDTISPKEVSSNLDLAVKAAVWYWIFNDLASIDSVQKVTLRINGGTNGLDDRCRLFRALMVD*	common_virus_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0037	cloud	direct	high	593	0.998	GCA_001054475.1_01521
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	81347	81706	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	28933	29292	GCA_001054475_1_34_85	GCA_001054475_1_34_85	-	95665	.	TIGR01594	phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]	MPMKDPDVWALIWAWLQINFGNGSIQSAGAAVFMSLLRMGFMRKKPAFRYVFIDAMICASIAGVAVPVCTHIFGHADFSAFFGTMIGFIGTEKIREFLFKFINRRIDKDDNDYSRNDIQ*	mmseqs_cdd	nonviral_gene	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0038	cloud	direct	high	359	0.997	GCA_001054475.1_01522
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	81954	82475	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	29540	30061	GCA_001054475_1_34_86	GCA_001054475_1_34_86	-	95665	.	PFAM:PF06576.10	anti-termination-protein-Q-like	MNKFSEIPELDYDQVQFVDNRMYSWGGWINSGRLDKPELNILYKLMKSVEPRDEPSSAICDDELGMMISEQVEMFFKKYDERMHFILFSYYVHKSTPNKIAVKLREREEPQYMQPCNGKRDIRIPCLKTCKRRVEKDLALMKAIIYDILIKIEVKLAIESEKRKNIKKIRFIY*	phrogs_hmm	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0039	cloud	direct	high	521	0.998	GCA_001054475.1_01524
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	82468	83052	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	30054	30638	GCA_001054475_1_34_87	GCA_001054475_1_34_87	-	95665	.	PFAM:PF05766.11	NinG-recombination-protein	MVVAMNKPKEHKCKVCGCYFVKTISSTQKVCSPKCAIVLSKEQARKKREKQDKQEKAQLKERKKKLLENDRGHWLKALQKEVNKFIRLRDKGQPCIACGAAWKPRFQASHFIPQGRSSFLRFDERNINSGCIRCNLFVGGGNIHGYRPRLVEKIGEKEVEWLEENQHRIKKWEISELKELIKVYRAKIKELENE*	common_virus_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0040	cloud	direct	moderate	573	0.979	GCA_001054475.1_01525
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	83205	83429	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	30791	31015	GCA_001054475_1_34_88	GCA_001054475_1_34_88	-	95665	.	.	hypothetical protein	MRMLIFILIIAGCFAIGYLSRSSVVFIALVLSFLSFALGINVYSDYVYEKALNGELLDVKKKYYELKYVKDKVE*	.	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0041	cloud	direct	high	224	0.996	GCA_001054475.1_01526
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	83433	83846	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	31019	31432	GCA_001054475_1_34_89	GCA_001054475_1_34_89	-	95665	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MDKKQFFLRSNQVRLNCIEFIKELPTDDKKPLVVKIQPMTRSLEQNSKLHALLSDISKQCEFNGKKRDIETWKMIFVSAHKIATGGQAEMVIGIEGEVINLRESTAQMSVKRLASLIEYVQAWGVENGVKFNDKWEF*	mmseqs_cdd	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0042	cloud	direct	high	413	0.998	GCA_001054475.1_01527
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	83846	85231	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	31432	32817	GCA_001054475_1_34_90	GCA_001054475_1_34_90	-	95665	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MINTTDNTTYNLEYGLISSMLATGLTAQAREVISWLEPEMFATYNLGALYANIRKQARKHDLIDFLLLSQDYGENLATLAEMANKATYGGNLLGYAKKIHSSWVNRSAQQTMLKLAGEMSQVRNESQVNELTQKALNQIQKLLVSKTEIKPVAMGELMDSYIDVLEKRSQSDFKERLLYTGIEAVDNILGGINSTDIVVVAGRPGTGKTEFSLTLTRNIAKNNGSVLFFSLEMGNFQLIDRLLSAVGGVGVKKLRNPQELDDLDYNRLTNAITDIREQKVYFVDRGGLSADEICAITERHLSDVGSLSAIVIDYLGLMDHKQGNNINLTQAIANSMSKLKTFSKNFNIPIILLCQLNREVDSRAVKRPANSDLRDSGSIEQDASQIIMLYREGAYKANTDNPYSEAIITKNRFGELGTAYMKFEKGHFLDCDQAKAYQDLNEKPQQAPKSYAKSYGKGAIQ*	rep_hall_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0043	shell	direct	high	1385	0.999	GCA_001054475.1_01528
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	85228	86007	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	32814	33593	GCA_001054475_1_34_91	GCA_001054475_1_34_91	-	95665	.	pfam13730	Helix-turn-helix domain. 	MSMRLMVQAMNCEVGNPARKLVLLKLADNANDDGVCFPSYQYIADKCEMSKRSAISHIDDLIKMGFVTKKARKNKDGSSANLYLLHLEQGSEKSALGGEKSALGGEKSALGGGEKSAPITSHSFNLSINRISDDEISANAEHADEKTKTSKRGKISVDYQGVMNAWNEVFNGSPIHLLKTLSPERKKAILKVAKTMLETEDVGSCSVEVFKEYFKDFLNQANSRANKFFFGGLDGNGWVAKFKYIMRPETFLNTFEDSL*	mmseqs_cdd	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0044	cloud	direct	high	779	0.999	GCA_001054475.1_01529
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	86004	86162	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	33590	33748	GCA_001054475_1_34_92	GCA_001054475_1_34_92	-	95665	.	.	hypothetical protein	MKRLFSPEFVASLDDRERILAYEAVKRELRERNASQKEYDRVTDQAIEELEI*	.	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0045	cloud	direct	high	158	0.994	GCA_001054475.1_01530
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	86164	86394	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	33750	33980	GCA_001054475_1_34_93	GCA_001054475_1_34_93	-	95665	.	pfam14090	Helix-turn-helix domain. This helix-turn-helix domain is often found in phage proteins and is likely to be DNA-binding.	MENINPNETTSQTQSAQILKALKNGERLTHLDAEKRFNCLRLGARIYDLKKRGHNIISKMITVPSGKRVAQYWLEA*	mmseqs_cdd	nonviral_gene	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0046	cloud	direct	high	230	0.996	GCA_001054475.1_01531
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	86443	86883	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	34029	34469	GCA_001054475_1_34_94	GCA_001054475_1_34_94	-	95665	.	PFAM:PF06892.10	CII-like-transcriptional-activator	MAMKQTIIEMIEKVPGGKSAVAGFLGFSEAELNNRLYQTKGQRFKNEELIALQLEYGCTDFIDELCRLAGGRFVPDVAEDELDKVELANLQLHELSARGLLFAVLETALEDGEITSKEEDKILQALSKHLAATQHSIECAIVLHKK*	phrogs_hmm	nonviral_gene	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0047	shell	direct	high	440	0.998	GCA_001054475.1_01532
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	86938	87120	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	34524	34706	GCA_001054475_1_34_95	GCA_001054475_1_34_95	-	95665	.	pfam14549	DNA-binding transcriptional regulator Cro. Bacteriophage P22 Cro protein represses genes normally expressed in early phage development and is necessary for the late stage of lytic growth. It does this by binding to the OL and OR operator-regions normally used by the repressor protein for lysogenic maintenance.	MLKNDVIAHFGKLENVAKALSISVAAVSQWKDVIPEKNAYRLQEITNGKLKIDRELYQKS*	mmseqs_cdd	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0048	cloud	direct	high	182	0.995	GCA_001054475.1_01533
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	87224	87883	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	34810	35469	GCA_001054475_1_34_96	GCA_001054475_1_34_96	+	95665	.	PDB:2FJR_A	Repressor-protein-CI	MKSETIGKRIRQRRTELKLTQKDVANAIKGVSHVAISQWESDTTKPNSENLVDLSTVLECDLLWLLRGEGSSSNVIPASIGANKVPLISYVQAGTWTGIDDLKESTGDFNYIYTFIDTSDDAFALEIKGDSMEPDFKAGDVIIIDPHIEPRAGEFVAAINGDYEATFKKYRPIGDIDELGRHHFELVPLNSDYPTLSSLKQEIRIIGTMVEHRIYRRKR*	common_virus_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0049	cloud	direct	high	659	0.998	GCA_001054475.1_01534
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	87929	88366	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	35515	35952	GCA_001054475_1_34_97	GCA_001054475_1_34_97	+	95665	.	.	hypothetical protein	MTKKDVFYRISGDEFAEFLNHKGASLNTFRCPVCGNESHSLLDCEDVINGETDKPLTPQRIVYQPTLSGTQYPGLVELRTMIEQGNVPRAQYSSLASEFGIIIGTQHYSAPVIHLICDNCSYVRTFRKNKILEYLNSKEDNPNEI*	.	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0050	cloud	direct	high	437	0.998	GCA_001054475.1_01535
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	88356	88877	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	35942	36463	GCA_001054475_1_34_98	GCA_001054475_1_34_98	+	95665	.	PFAM:PF10779.8	hemolysin	MKSKFKDENISSAPYDQFYQGGNIPSSNIKGETLYMRDEAIFTDYTFRMSELEKSVFRIDKDLGEIKSNYASKEYLSEKLNSNFKWLLAIILGVAAGGYALHWDTQKETNQRFLQVDNRFQQMDEKLHSTDVRLTKVEVKLDSIDTRLAMVEKKVDSIDDKLDILIQQKQAKR*	phrogs_hmm	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0051	cloud	direct	high	521	0.998	GCA_001054475.1_01536
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	89868	90353	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	37454	37939	GCA_001054475_1_34_99	GCA_001054475_1_34_99	-	95665	.	.	hypothetical protein	MTNDSEFSLFYAHNLTKIYGTFNSRIANIITFIQILFGSSLALDVTKTFPLLSDYHWTFWTGAIVTATAILSFVYKFDEKALLSNQLYRQYGSIISKYRHNPTLDIDHEMLNLPIDEIKIVGAFEDIAYKRTAIQLSRGDYTKLDYYQCFIAYFSGDSFND*	.	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0052	cloud	direct	high	485	0.998	GCA_001054475.1_01538
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	90639	91436	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	38225	39022	GCA_001054475_1_34_100	GCA_001054475_1_34_100	+	95665	.	.	hypothetical protein	MVAETHYTIDKNMKLLIEIDNSEPLQLSTFCQSMEGIAAEYRQFIQDNKIDIEPCEQHIYVEKITQGCFLVELAALVSSTYPLIEQANAILEFGGHLKMIFDWAMNKGERPERLTPAMLKNASNILEPIAIDPKAQFNLQVTDNKGDVHIYLQGDNALAGLAQNNINRELRLLKERDDNTLHNTPLYWSSTADAQSKAQDRAIIPAVSSKPVRVKFEDKTLKEKMILNEEYPYHKIFLVDVLVEYIDEEPVIYKILRLNSSMNKI*	.	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0053	cloud	direct	high	797	0.999	GCA_001054475.1_01539
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	91686	92342	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	39272	39928	GCA_001054475_1_34_101	GCA_001054475_1_34_101	+	95665	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MSALTIFNFENTPIQTIVENNEIFFRATQLAELLQYKNPHKAIKDHVDPDDLTKREIVNTINKRAQVLFVNESGMYSLVLSSKLEQAKKVKRWVTSEVLPAIRKTGKYQLHPQQLALPEPQKFTFEFTEYELQQLAWLWFAFKRGVGTFQHIEKAFNVLGSNMSGQIYGQAYEYLSVLRSTNKILNRITSDFNIDPMTNWRVLKHLRGFNPKAVKIDF*	common_virus_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0054	cloud	direct	high	656	0.998	GCA_001054475.1_01541
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	92434	92733	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	40020	40319	GCA_001054475_1_34_102	GCA_001054475_1_34_102	+	95665	.	.	hypothetical protein	MQKFTDVFAETIPFLCKTAIAFTLAFLIGGIAYCFADEPTDWHDNTLSEQIQQEARAKAKAQWREENGIYQANLTPQVNADMYRYVEQKQAEINRTWSK*	.	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0055	cloud	direct	high	299	0.997	GCA_001054475.1_01542
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	92687	93268	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	40273	40854	GCA_001054475_1_34_103	GCA_001054475_1_34_103	+	95665	.	.	hypothetical protein	MSNKSKPKLTALGVNNETDLQNLRRICSKSGSYFGELWVNNKLYQKTAYFANEAIATLRLNKRIENFNAMENTKIPPYQKDAETNQFPAAPKKSAVEKEVVITKPQGLTLTQPKINVKTKNKPTTPRRKPFTPYGLNGYFMDKQGNIRLHLDRKAHAHTIVLNPEMFSMLANMVQATQEQSNETHNTISLAMR*	.	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0056	cloud	direct	high	581	0.998	GCA_001054475.1_01543
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	93231	93395	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	40817	40981	GCA_001054475_1_34_104	GCA_001054475_1_34_104	+	95665	.	.	hypothetical protein	MKRTTLSPWQCDNPYDYYAQFETESIERDEPEEDWREPEDADCEYWQSNCYGRG*	.	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0057	shell	direct	high	164	0.994	GCA_001054475.1_01544
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	93398	93541	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	40984	41127	GCA_001054475_1_34_105	GCA_001054475_1_34_105	+	95665	.	.	hypothetical protein	MEETPRERLESKAELLNAIRNWLWQERITPEELQAEIEYIQQNPLPF*	.	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0058	shell	direct	high	143	0.993	GCA_001054475.1_01545
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	93551	94051	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	41137	41637	GCA_001054475_1_34_106	GCA_001054475_1_34_106	+	95665	.	PFAM:PF05565.10	resistance-protein	MKLYEITEQLENIKELLENPEFADNADIAKALDAVQQDFDKKAENVVYVIKNTEGDIEVIDAEIKRLQAMKKQRQNGIEQIKNYLKHNMEATGTAKINCPLFTISYRESKQSAVQLDEDLFLANNCDETLVNVKITANKTEIKARLKAGEEIPGAKLVDSQVLTIR*	common_virus_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0059	shell	direct	high	500	0.998	GCA_001054475.1_01546
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	94062	94718	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	41648	42304	GCA_001054475_1_34_107	GCA_001054475_1_34_107	+	95665	.	pfam04404	ERF superfamily. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to ERF.	MELQSANLSELMPELIQAISQLGNLSKDKQGYGYKYAELSKVLDTCRPILAEHNLVITQLVTVLNDEPTLVTTLFHKSGQFLRSCYPLVKAGVKQANDAQQVGAAITYARRYALTAMLFMAQEDDDAASVGKREQPSSPKSERPNNSNKSTQQNVNSTPSEHYHDDVENLRKRLLGKTKEQIESEQLYDKSINWLKENNPDLIDEYNLMFNDFLGNLL*	mmseqs_cdd	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0060	shell	direct	high	656	0.998	GCA_001054475.1_01547
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	94728	95141	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	42314	42727	GCA_001054475_1_34_108	GCA_001054475_1_34_108	+	95665	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MSVNKCLFIGNLTAGPEIRTMPNGEQVANFSIALNERYKAKDGNVVENVEYVRIVLYRRLAEIAGQYLHKGSQVYIEGRLKTRKWQDNNGQDRYTTEIQGDNLQMLGGRQDWPKQSKPEPLSAMAEQDDGFSDGIPF*	common_virus_hmm	common_virus	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0061	cloud	direct	high	413	0.998	GCA_001054475.1_01548
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	95151	95333	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	42737	42919	GCA_001054475_1_34_109	GCA_001054475_1_34_109	+	95665	.	PF06289.11	Flagellar and Swarming motility proteins	MGKEITLTLLEGLKKAQVCADSIFYIKPVGDNSFVSTTDGKSLFVKESKSRILKMIETAK*	hhsuite_tools	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0062	cloud	direct	high	182	0.995	GCA_001054475.1_01549
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	CDS	95375	95662	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	42961	43248	GCA_001054475_1_34_110	GCA_001054475_1_34_110	+	95665	.	2PIG_B	Putative transferase	MKEQQKKYELTDEFIEHWSGKKLYRIRALVAFGFVMAGQLGGFVESEKNLDQSLSGNAWVYGDAQVYGNAQVSGDAQVYGNAQVSGNAQVSGNAWV	hhsuite_tools	hypothetical_protein	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_CDS_0063	.	unmatched_CDS	none	0	0	.
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	26082	27488	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	1	1407	GCA_001054475_1_39_28	GCA_001054475_1_39_28	-	113650	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MASQRQIQSSDQKTEQVSIPPHSTEAEQAVLGGIMLSNQHWDGIAERVIAEDFYTFAHKAIFQTMEELMRNQTPIDLITLDQALKAKGISDSVGGFAYLADLSNNTPNAINILAYAEIVREKAILRELIAVGNRIAENSYSPKGKDIKMVLDEAEREVFAIAEKRSSSTEGPQNVISVLESTIARIDTLSKLENHSGVTGVTTGFVDLDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAAMASDKPVLVFSLEMPAEQIMMRMIASLARVDQTKIRTGQNLDETEWSKIASVFGMFKQKNNLYIDDSSGLTPTELRSRARRVYRENGGLSMIMVDYLQLMRAPAFSDNRTLEIAEISRSLKALAKELEVPVIALSQLNRTLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSEDKGVAEIIIGKQRNGPIGRVRLAFNGQFSRFDNLAEQREYRDDY*	rep_hall_hmm	common_virus	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0001	persistent	direct	high	1406	0.999	GCA_001054475.1_01679
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	27638	29074	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	1557	2993	GCA_001054475_1_39_29	GCA_001054475_1_39_29	-	113650	.	PRK05826	pyruvate kinase; Provisional	MSRKLRRTKIVCTMGPATDRDNNLEKIIAAGANVVRMNFSHGTPDDHIERAERVRAIAKKLGKTVAILGDLQGPKIRVSTFKDGKIFLNVGDKFILDAELPKGEGNQEAVGLDYKTLPQDVVPGDILLLDDGRVQLKVLSTEGAKVFTEVTVGGPLSNNKGINKLGGGLSADALTEKDKADIITAARIGVDYLAVSFPRSSADLNYARELAKQAGLEAKIVAKVERAETVVDDASMDDIILASDVIMVARGDLGVEIGDPELVGVQKKLIRRSRQLNRAVITATQMMESMISNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPAETVATMARVCLGAEKMPSINVSHHRLDREFRDIEESVAMSAMYAANHLSGIAAIITLSHSGRTPLLMSRISSGLPIFALSRVQETLNRCALYRGVTPVHFDGESRSSAGAKAAINLLKEKGYLVSGDLVLLTQGDESEGTTNVCRTLTVE*	mmseqs_cdd	nonviral_gene	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0002	persistent	direct	high	1436	0.999	GCA_001054475.1_01680
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	29570	30787	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	3489	4706	GCA_001054475_1_39_30	GCA_001054475_1_39_30	+	113650	.	PDB:1Z19_B	Integrase	MPRVTKPLTNTEVDKAKTKDKEYNLSDGNGLFLRIKPTGAKAWIFNYYHPVTNKRTSFTIGTYPAITLAQARQKREEYRALLAQSIDPQEYIKEQELIKNGQNENTFYKVALLWKEKRSKEIEPMTMEKNWARLENYLFPTLGNYPIDDISSPLLIKTVRQLNEKGFNDTLHRLLNLANQILNYAVTIGLISFNSCLKASDAYHKEPQKHHPAIKPEELPKLLQDFKNSSRDHLTKVLFRWQLLSMVRPAEAVSVEWSEIDFDKKLWTIPAEKMKKTRQGAFPHIVPLSSLMMDILKELKPITGDDKFVFSHYHKPNQSASKELIANALRKIGYKGIQDAHGLRSIARTFLENQQVDFRIAESCLAHSIGNKTSQAYNRYDYVELRRPVMQLWSDFVEQCEKESV*	common_virus_hmm	common_virus	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0003	shell	direct	high	1217	0.999	GCA_001054475.1_01682
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	30960	32729	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	4879	6648	GCA_001054475_1_39_31	GCA_001054475_1_39_31	-	113650	.	PFAM:PF04735.11	DNA-helicase	MARLINAPHLADQPHEPYSDLFVLAGSKAWKAWDDGKGEEWLLLCSLVEGLESKQKPVILGENQLNNISLTRIAKEDQQLVKIAQYGELKQEEITAICQNLAKNTSAREVKLIDAAAQVKEDLSSYIQRLRTDKKTADLATQLAPPEKLKENDGVNKKARALTKWLNMDLALNPKDRELYRYDGISWQLVDKFEFLDNAVAFFDEQDFNYSARSIESIIDTIKIQSPKMGTQAQELIAFNNGTLNRTTLEFLPHYRENWLMSYIPHEYLNSAQNTPYFDKWLEFVSGGKESKKNAILAALYAVLTNRNDWQLFFEVTGDGGSGKSVFANIATLLAGEQNTESGRLIDLDEPRGRENFVGKTLLICPEQSRYGGDGGGLKSITGGDPVNIDPKHRTKFKAVIPAVVLIVNNEATRFTERSGGIERRRVIFHFDKVVPENERDPNIMDKIEREVGGIIYKLIHTFEQPETAKAALKEQQTSDEALEIKSESDHITEFCGYFYTTPQNDGLYIGNANQVNKSRTHLYPAYLAFAVASGITNTLTLRNFSNSLKQGFAQHKNKFEFSKVKGKYGYRSNVHFKNYEEFQNEFNS*	rep_hall_hmm	common_virus	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0004	shell	direct	high	1769	0.999	GCA_001054475.1_01683
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	32713	33156	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	6632	7075	GCA_001054475_1_39_32	GCA_001054475_1_39_32	-	113650	.	.	hypothetical protein	MNMNEKLDYSNLSAVELKAIMYSQMNCEKKEGEAHYLPLPYLGETIVTLAEIFESYPSEKLYTLRNLHDELLAVNKHLLQLAPNPPSLNPEEIVASLTNDEIIDGLLKSSIVISLVETLTYFQKVVAERIDDIENGVLKGVNNGSIN*	.	hypothetical_protein	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0005	shell	direct	high	443	0.998	GCA_001054475.1_01684
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	33158	33661	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	7077	7580	GCA_001054475_1_39_33	GCA_001054475_1_39_33	-	113650	.	.	hypothetical protein	MKPNNPMEQLKQWKAASDKNLVSSGEKRHQLQKAPPVAKSATGNEEQKTEKRKGKLFFNPLALKYSQISRQFQLIQDSNKRCLEVYPGDFHHKIKFRDEIVDLMNKLAGGGNLLNALAKEGNLSREDTAKLKYFNQANKYLLYKFSEVVEQIGALNSERAEQQKGSK*	.	hypothetical_protein	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0006	shell	direct	high	503	0.998	GCA_001054475.1_01685
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	33648	33854	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	7567	7773	GCA_001054475_1_39_34	GCA_001054475_1_39_34	-	113650	.	.	hypothetical protein	MKAKKIKAFKEPYVPTPEQLEKACKRIKQFLAFAEDYLHTGHYKGLAASIEQIKKAATIRKVARNETK*	.	hypothetical_protein	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0007	shell	direct	high	206	0.995	GCA_001054475.1_01686
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	33844	34041	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	7763	7960	GCA_001054475_1_39_35	GCA_001054475_1_39_35	-	113650	.	.	hypothetical protein	MSNTKFPYTLVFTYDDGDQFIAGEYGTLREALQAKIRCKHEIGQADICGRVLEVITILKGEDNES*	.	hypothetical_protein	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0008	shell	direct	high	197	0.995	GCA_001054475.1_01687
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	34041	34370	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	7960	8289	GCA_001054475_1_39_36	GCA_001054475_1_39_36	-	113650	.	.	hypothetical protein	MLSYGTIQMALQDVVNSNDVSEQTLEKIRTESECLCESIEYGLMELGDMVSRLGHFADSKQDFDNRAMSNDNVKHIGALIQANAYFLNTLRNVSTDATYHLNGGNKGAK*	.	hypothetical_protein	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0009	shell	direct	high	329	0.997	GCA_001054475.1_01688
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	34363	34962	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	8282	8881	GCA_001054475_1_39_37	GCA_001054475_1_39_37	-	113650	.	NF033153	"host cell division inhibitor Icd domain. Icd from temperate phage P1 inhibits cell division in its host. Homologous sequence is found in many other proteins, often as the C-terminal region of what appears to be a much larger protein. Putative phage proteins that contain this domain may be designated ""host cell division inhibitor Icd-like protein"". See PMID: 8491703 for a description of Icd. Many proteins with this domain also have the Ash domain described by pfam10554, which also occurs in phage."	MNLIHKYYINNEIFYNSNPLQSAVKFGIISPQSEKVIASRGKLNYLLLANDSTPLNRAFFVRDIRTPKEYADFVFNLNPIILSMVERNEPSLTGCFPVETVFHLVTFYRPTVESLAVVPENLLLELTQMYQFIFAAIRRTDLSNHLQKIRITADNERNARAKLAREFVLVLAGRINLQSDRTLSANTFRSISFAEVVHA*	mmseqs_cdd	nonviral_gene	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0010	shell	direct	high	599	0.998	GCA_001054475.1_01689
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	35053	35256	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	8972	9175	GCA_001054475_1_39_38	GCA_001054475_1_39_38	-	113650	.	COG3311	Predicted DNA-binding transcriptional regulator AlpA [Transcription, Mobilome: prophages, transposons]. 	MNLNLNPNQKLISGETACHIVGFGRTKLNLLVKAKKFPQPIRFSQNFVRWDLEEVNQWIEEQKAARA*	mmseqs_cdd	nonviral_gene	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0011	shell	direct	high	203	0.995	GCA_001054475.1_01691
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	35444	36442	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	9363	10361	GCA_001054475_1_39_39	GCA_001054475_1_39_39	-	113650	.	.	hypothetical protein	MLNLPPRKEYTLNQALEYLRKFHNEDRIDKEDLLYHAKEGNLKTVVFINGGRDLYNSVRGDYFTISRINRKELTELWLLDNDVKIIENNNLNVEKEIHLSTVYALANEYLGTWFAIPKTKRMTKYPLQNILIGKNVDDDLRKLSPINEFEFGGYFRVDPSDYGQDLQEILDSNVIYKKGYNEFEITEHSNAYFSFMLSPENTYCELPISIDDILILHDDLMDFVGLDSRLTNDPKKEIEKLKKEIEEKQKIIDSLRLINPKGRISSPQKQLFALLVKRCYSDIKSRNKLFDVINADLKSLEIRNDDISADTFYKLIDESNDIIKAIFPPKKS*	.	hypothetical_protein	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0012	cloud	direct	high	998	0.999	GCA_001054475.1_01692
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	36832	37287	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	10751	11206	GCA_001054475_1_39_40	GCA_001054475_1_39_40	-	113650	.	PFAM:PF04883.11	tail-component	MGSFSNAIEQFRIKIENQLMTEQPKAIKKALNAAAQVLKDEIKPIVPTLSKSTDFRKKGTVKNNVRHRTRLFKDKSGGVTIVRIRRTKGRRMASVRDNTKDRTDPFYWFMLDRGTKKMSGAHFMERAWGKGKSRAINTAKKVFISEMKKLN*	hallmark_hmm	common_virus	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0013	cloud	direct	high	455	0.998	GCA_001054475.1_01694
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	37298	38965	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	11217	12884	GCA_001054475_1_39_41	GCA_001054475_1_39_41	-	113650	.	CDD:COG4626	Large-Terminase	MAIWHEYAEKIQSGEIVACKKIKQAVTRYFNDLNNPDYFFDQSAVEKFIAFSKLCPHVKGHLRGEPIILSDWQVFLFANILGFKRKDTGLRKYRSAYVQVARKNAKSTVAAVLANWFLVMEGGQQDIYTAAVSRDQARIVFDDARQMCLLSPLLKKRLNIQQHKLINPKNNSIMRPLAAKSSTIEGTNPSLAIVDEYHLHTDNSVYSALELGQGARPEGLLFAITTAGSNVISACKQHYDYCAQILEGNEQNDSLFVLIFELDEENEIDKQENWIKANPNIGKSIPYLDFENTIKKARGIPSEWVEMLTKRFNVWCQGTTPWLGEGNWAQCERQYTESDLLHQDCYLGLDLSSTNDLTSLCYTFPQGKKVRLVTRHYIPEFQLNNVANKNRAMYRNWVRSGWLIATEGDCIDYDKIRDDILKDAQRFNIKMIGFDVWNATHLRTQLQAAGLEVEPFPQTYQRFSPVAKSAEVLINRQMIEHHGDPVLTWALSNVVMETDANANIKPNKKKAANKIDPAVAFLMSFGTYQLEYDDLIFELSDEHKQALEQFNGIDL*	hallmark_hmm	common_virus	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0014	shell	direct	high	1667	0.999	GCA_001054475.1_01695
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	38973	39347	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	12892	13266	GCA_001054475_1_39_42	GCA_001054475_1_39_42	-	113650	.	CDD:COG3747	Small-Terminase	MTAKKKNLHTPPSFLDPIAKSVWKERIPQLLERGDIQDADLIHLELYCVNYSLFRAAVEDIHKNGFSIVNSQGTQSRNPALSAKADAEKVMVKMSSLLGFDPVSRRKNPVEVDSTDMIDEILTM*	hallmark_hmm	common_virus	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0015	shell	direct	high	374	0.997	GCA_001054475.1_01696
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	39668	40024	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	13587	13943	GCA_001054475_1_39_43	GCA_001054475_1_39_43	-	113650	.	PDB:5H0M_A	HNH-endonuclease	MPYQPLRRCSYPGCRNKVKSGRCEEHKPKDNRPNSSARGYDHKWSKYRAQYLKHHPLCVMCLEKGIYTPATVIDHIKPVENGQAAPLFWVESNHQSLCRDCHSYKTRVIDQRGFGAKK*	common_virus_hmm	common_virus	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0016	.	unmatched_CDS	none	0	0	.
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	40035	40349	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	13954	14268	GCA_001054475_1_39_44	GCA_001054475_1_39_44	-	113650	.	CDD:TIGR01560	uncharacterized-phage-protein-(possible-DNA-packaging)	MANINLTLDEIKAHLNLDHDLDDELLEAYKAATLEVCKKHIGKTFGDEETENTVPFTPSIKVGCLMYIAYLYTNREAITDLANLKQAPMTISALWEVYREPCAY*	hallmark_hmm	common_virus	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0017	shell	direct	high	314	0.997	GCA_001054475.1_01697
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	40336	40686	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	14255	14605	GCA_001054475_1_39_45	GCA_001054475_1_39_45	-	113650	.	PDB:2KZ4_A	Head-tail-adaptor	MAVMLKAGKYNKVITIEARNYPRERETNLHGERKAFWRHIATVRASVEPLQGREYFSGPFQMGENIIRIRYIEGITNKMRIKYGKRLFDIYSVIDSMESHRELQLMCKEGEAYGEY*	hallmark_hmm	common_virus	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0018	cloud	direct	high	350	0.997	GCA_001054475.1_01698
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	40670	41902	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	14589	15821	GCA_001054475_1_39_46	GCA_001054475_1_39_46	-	113650	.	CDD:COG4695	Portal-protein	MWNPFRRKEQRSEPTTIEELLSYMGVNNTGAGEFVSPQTAESLPAVMNAVTVISEAVASMPCYLYALKEDGRERIYRHPVEYLLNEMPNRSQTPYQFKNTMMRHCLLNGNAYAVIEWNNKGEPISLTPYQPSAVNIFRKVTGEYIYQITDLNGVTKNYLQDEILHLRHSSVDGFMGRSPITVCRETVGLGLAQQRHGAAIMKNGLMASGLISTAEWLDDAKAQKAVKALERYKGAKNAGKTPILEGSMEYKQLGMTNQDAEWLASRTFTISDIARIYNISPIFLQDYSNSSYANFSEASRAFLSQTLRPWLTNFEQQLKDALMIDLGSNSKKRHLIEFDTSDLLRTSQNERFNSYDVAIKAGVMSPNEVRRREGLPPYAGGDEFSQAWKQTVEVKRGDEQEQGASNGSDA*	hallmark_hmm	common_virus	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0019	shell	direct	high	1232	0.999	GCA_001054475.1_01699
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	41904	42470	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	15823	16389	GCA_001054475_1_39_47	GCA_001054475_1_39_47	-	113650	.	CDD:COG3740	head-maturation-protease	MKKEFEIRSATISTDEENQKLIGYAVKWNSPSQVLYCDFVESFAPKAFSESLASGEDVRALFEHDYTKLLGRTSAGTLKLEEDSIGLRFELTPPNTTIGKDLLVSVSRGDITGMSFGFRASQEEWDFDVEPCQRTVQKAELFEVTVTSIPAYPESSVEIAKRSMVAAKEKTQEHSTALLKQWLDVMEA*	hallmark_hmm	common_virus	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0020	shell	direct	high	566	0.998	GCA_001054475.1_01700
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	42515	43705	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	16434	17624	GCA_001054475_1_39_48	GCA_001054475_1_39_48	-	113650	.	CDD:COG4653	Major-Capsid-protein	MLKKLIELRQQKAEKVAEMRAMLDKAEKENRSLDETESVDFDKLKDLVKQLSDEISKYETVADEERNLGAQSNPLETRSTKQFSNDELRHYIKTGELRNLTTANGEDGGYSVIPQLDKEVMKRLTDDSVMRQLCNVVRLPIGAKEYKKLVSAGGATVEHGTEGTARNGTATPKLHEVTIALNSIYAYPKTTQEILDFSSIDVLGWLTDEITETFTETEEVDLTSGDGNKKSKGLLTYERTTENDKVRPFGKLQKIEVAGAAKIEADTLIDAFYTLHSKYRKNAVWVMSSTIAAALQKLKNKNGDYIWRDGLTTDAPATLLGRPVYFLETMPTGGANQAVIAFGDFKRGYFIVDHETGVRTRPDNLTEPGFYKVHTDKYLGGGVVDSNAIKVIETTA*	hallmark_hmm	common_virus	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0021	shell	direct	high	1190	0.999	GCA_001054475.1_01701
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	43720	44127	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	17639	18046	GCA_001054475_1_39_49	GCA_001054475_1_39_49	-	113650	.	PFAM:PF06141.10	Minor-tail-protein	MLIHNEVRNEIVTLIKNNIPEIGNVYNGRAFFTSLKQQLPAISVFLDDAECDFKVMGESEWQAELNISIFLPYSEGEPNIDRIAEKVNSLITFTGYRHIQFVRGIQYRYGYDEDNASWMNGTLSYLIEYGRAPIK*	hallmark_hmm	common_virus	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0022	cloud	direct	high	407	0.998	GCA_001054475.1_01702
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	44943	45680	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	18862	19599	GCA_001054475_1_39_50	GCA_001054475_1_39_50	+	113650	.	PF09192.10	Actin-fragmin kinase, catalytic	MDNIVFIKERMEMGITHPFICQTENNEWYIVKTLNMMPISQLLAEVIGSKLVAEIGLPCPPVKFIYIPLQATLYVKPDWKDDLLIGPAFGSNYISYAKVAKTAQAKNTVYLSEQEQKWLYMFDRWILNSDRTASLIGTGNINLLFDEEQKKILVIDHNLAFDENADFSEHIFAPPNRTWRLDWVDKQTFTEKAIDILRNFDDIYKSIPDDWFARDEQFQEIETQINRIRSILNRITEDCYWDNIE*	hhsuite_tools	nonviral_gene	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0023	shell	direct	high	737	0.999	GCA_001054475.1_01703
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	CDS	45677	46492	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	19596	20411	GCA_001054475_1_39_51	GCA_001054475_1_39_51	+	113650	.	pfam11236	Protein of unknown function (DUF3037). This bacterial family of proteins has no known function.	MKQPILYSFVRFRPYVETGEFVNVGLLMCEPEKKKLTYRLVPKNNKRVNDFFYKSKMFETVRETINDELQYIVNRLFTGSAQEMATFFHHYIDIKEGIVQYSNAAVGIVDNPQDYFERLYAQFIQKAGVKEESQEQTILRHYKALFKQENDRVLSQYKQYMVNGDYAKFSLPLALKNQQDKQILKAVKPLVFDQIESPSMIEHCDNWVAKINRAEEEGLIKRDNILFALDTPSTAHKANILDTIKRTFDRFNLQHISWNEDRQILDFAKSI*	mmseqs_cdd	nonviral_gene	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_CDS_0024	shell	direct	high	815	0.999	GCA_001054475.1_01704
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	tRNA	89546	89623	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	37132	37209	tRNA-Met	tRNA-Met	+	95665	.	tRNAscan-SE score: 50.4	Met	NA	tRNAscan-SE	.	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote	cenote	tRNA	81769	81841	GCA_001054475.1	JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475.1_JVSB01000053.1	GCA_001054475.1|JVSB01000053.1	GCA_001054475_1_34	GCA_001054475_1_34@C3	29355	29427	tRNA-Asn	tRNA-Asn	-	95665	.	tRNAscan-SE score: 66.7	Asn	NA	tRNAscan-SE	.	C3	43251	52415	95666	GCA_001054475.1|JVSB01000053.1@region_52416_95666@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote	cenote	tRNA	29302	29378	GCA_001054475.1	JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475.1_JVSB01000060.1	GCA_001054475.1|JVSB01000060.1	GCA_001054475_1_39	GCA_001054475_1_39@C2	3221	3297	tRNA-Val	tRNA-Val	+	113650	.	tRNAscan-SE score: 70.7	Val	NA	tRNAscan-SE	.	C2	20411	26082	46493	GCA_001054475.1|JVSB01000060.1@region_26083_46493@tool_cenote_tRNA_0001	.	.	.	.	.	.