core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	297	590	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	298	591	GCA_001058435_1_33_1	GCA_001058435_1_33_1	+	82041	.	PFAM:PF16082.4	holin	MGFFIALEMGWSMKMFKDPGNQTYVWSGFSGVLAWLGDQNNLMLLSLAIGILTALVNVYSKCAEGRMMRRENERKEEIHKVRMERLKRGLPDEIDED*	phrogs_hmm	hypothetical_protein	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0001	cloud	direct	moderate	251	0.854	GCA_001058435.1_01513
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	571	1125	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	572	1126	GCA_001058435_1_33_2	GCA_001058435_1_33_2	+	82041	.	CDD:cd16901	P1-lysozyme	MKLTRTRTTLGAAGFVCAVSSIITLMYAQFGEELILSPKGAEIIGNAEGCRRDPYKCPADVLTVGIGSTAYSGQPVDPKHRYTDLEIAERWKNDIQVAEKCVLNYGNGRALPQSVFDSAVSITFNAGCVAVRNSTLFKQLRSGNYHQACYEYPKWVYAGGKILPGLVSRREKEKALCLADLKQP*	common_virus_hmm	common_virus	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0002	shell	direct	moderate	482	0.868	GCA_001058435.1_01514
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	1098	1433	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	1099	1434	GCA_001058435_1_33_3	GCA_001058435_1_33_3	+	82041	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MFSRFETALKLTALCLILGLCGWTWYQSQKISSLKAENQAQAQTIQQQEDANKALTIALQQERDAVIAQQQRNDEIERVATENAESVKTIIKTQPCAHTRLPQSALDRLYK*	mmseqs_cdd	nonviral_gene	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0003	cloud	direct	high	335	0.997	GCA_001058435.1_01515
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	1384	1626	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	1385	1627	GCA_001058435_1_33_4	GCA_001058435_1_33_4	+	82041	.	PDB:5CYB_A	Lipoprotein	MLTLVCLSLLLTACTNKVTTKAEYIYPPQAYTAPCVKTAFTGETYGDVVIQLVKVTAERDKCASQVDNLNKWINQTKTAN*	common_virus_hmm	common_virus	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0004	cloud	ambiguous	low	51	0.21	GCA_001058435.1_01515
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	1896	2369	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	1897	2370	GCA_001058435_1_33_5	GCA_001058435_1_33_5	+	82041	.	pfam07278	Protein of unknown function (DUF1441). This family consists of several hypothetical Enterobacterial proteins of around 160 residues in length. The function of this family is unknown. However, it appears to be distantly related to other HTH families so may act as a transcriptional regulator.	MDNLYDLKLNINQIAELVGMHRQTVSQRVAGLTPAIGSNSKLKLYALSDLIKIGLAEKMTADVDSLSPVERRAFWQAENERLKYERDTGELVPSFEVAQEMGFLAKAVVQSLDTLPDILERDCALTPTQLTRVIQVIDDVKLQMSLHIQDGDNKSEE*	mmseqs_cdd	common_virus	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0005	shell	direct	high	473	0.998	GCA_001058435.1_01516
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	2372	4492	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	2373	4493	GCA_001058435_1_33_6	GCA_001058435_1_33_6	+	82041	.	CDD:COG5525	Large-Terminase	MFASAKDIRRDIANLLKPPRRMKVSEAVAEYMRVPVGGGNSVKWDKDTAAYMLDPMDCLNSREYDAVIFVGPARTGKTIGLIDGWITYAIICDPSDFLLVQLTQEKASEHSRKRLDRTFRCSPEIAKRLSPRKNDNNVHDKYFRAGNLLKIGWPSINVLSSSDYKYVALTDYDRWPDDVDGEGDGFSLASKRTTTFMSAGMTLVESSPGKDIVDIKHHPKTTHEAPPTTGILSLYNRGDRRRFYWQCPHCKEWFEPSMANMVGYRNDTDYVKASENARLQCPHCQSLVEPDKKRALNIGGKWLKEGQTIDKDGVIHGEGRNSRIASFWLEGPAAAYQTWAQLTYKLLTAEHEFEMTGSEETLKAVTNTDWGLPYLPRSALEQRRSDELMERREDTEKRTVPYGCRFLLAAVDVQGGRNRRFVVQIVGYGENSERWLIDRYNIKSSMRSNSDGESLPIDPSAYPEDWDLLISDVLNKQYRIEGLDGGFMPILAMAVDSGGEDGVTDNAYKFWRRCKRDGISKRVYLVKGDSTKRQKLISRTYPDNTSRSDRHAKARGDVPLYLLQTDQLKDRISNALSRETIGANYIHFPSWLGEWFFDELTYEERGQDGKWRKPGKGNNEAFDLFCYAHAIAILRGYERIKWGDEDNVPYWAKLPSVNPNVIRRESSAPEEETESAVEIEQVKPQPKPKTKSNWLNGGGSKKSGWL*	hallmark_hmm	common_virus	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0006	shell	direct	high	2120	1.0	GCA_001058435.1_01517
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	4616	5134	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	4617	5135	GCA_001058435_1_33_7	GCA_001058435_1_33_7	+	82041	.	COG3646	Phage regulatory protein Rha [Mobilome: prophages, transposons]. 	MQLANPENFKQFVQNKGSKTITTSETVAKVFGKLHAHVMRDIREILESGDEEFNRSNFGLVEYIDKKGEKRPMFEMTKDGFMLLVMGYKTKKAMAIKIAYIKAFNFMQDQLLSGNMTLLEQYYQALGEHKAEKQLASVCGKALNEWKGKKPLLEATLKIFEDKLQIELPLLN*	mmseqs_cdd	nonviral_gene	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0007	cloud	direct	high	518	0.998	GCA_001058435.1_01518
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	5149	5394	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	5150	5395	GCA_001058435_1_33_8	GCA_001058435_1_33_8	+	82041	.	.	hypothetical protein	MRFFIGAKMAIYDRDELEEKIRTLDEKIENAQSQVSFNGRSVSYQVSEWTKQRDRYQQMLNELLAETRQHVKRHRIKYARF*	.	hypothetical_protein	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0008	.	unmatched_CDS	none	0	0	.
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	5398	6921	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	5399	6922	GCA_001058435_1_33_9	GCA_001058435_1_33_9	+	82041	.	CDD:COG5511	Major-Capsid-protein	MGILDKTIAAISPKWGAQRAKSRYVMNAYEAAMPNRTHKAKRESQGANVSTKQSAVSLREQARALDQNHDIVIGILDKMEERVIGSRGIHIEPQPLKLTGDVDEELAEQIRKKWAEWSVRPEVTGQFTRPELERMLLRTWLRDGEVFIQLVRGSVAGLNHSTKIAFSLEALEPDFVPMNTLDTANVIQGIEINAWRRPVSYRVYMDNPQENNRTFGRVKTVPAENMLHLAFKKRLHQLRGVSMLHGVIVRLADLKDYEESERVAARIAAAFTMYIKKGDAALYGDNEDYSADSPERDFEIAPGAIIDDLKPGEDIGLINSNRPNVNLETFRNGQLRATAAGTRSSYSSIARDYNGTYSSQRQELVESFEGYSVLQDTFVAHISRPIYREWLKMAIVSGEIEVPVDIDPASLYNAVYSGPVMPWIDPTKEAQAWKERIKGGLATESQAVRASGSNPAEVKRRRKVEVDENRELGLKFDTDLTNTGTKDEKTKDDSVAGGDGNERDKDE*	hallmark_hmm	common_virus	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0009	shell	direct	high	1523	0.999	GCA_001058435.1_01519
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	6872	8899	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	6873	8900	GCA_001058435_1_33_10	GCA_001058435_1_33_10	+	82041	.	PDB:6WKK_D	Major-Capsid-Protein	MILSPVAMATSATKTNNQSWYSIKAKANDTAEISIYDEIGYWGITAKSFSKDLKALGNNLKQINLHIHSPGGDVFDGIAIYNLLKNHPANVTVYIDGLAASMASVIAMAGNEVIMPENAMMMIHKPWGIQGGDAEDMRKYADLLDKVENTLIPAYANKTGKTPEELAEMLSAETWLNGKECVEQGFADKLAEPLVAMASIKSRKLEDFENMPKAMKDMLFKPQGNAGASAPQATPTPAQPAPTVPVNQAPTAPVDNTAQVQAELNKRNADIKAVFAPFGTTHNDLLVECLGDLSITPDQAKDKLLAKLGAGTTPSAAPTAYAGNGNIVGDSVKQSLLARAGIDKDKADAKDNAYNAMTLRELARASLVDRGISVAGQNAMSMVGLAFTHSSSDFGQILIDVAHKSLLKGWETAAENFDQFTSRGTLTDFRAAKRVGLGDFGYLPQVGEGEEYTYGTIGDEGASVALATYGQLFSITRQAIINDDMHLLTKIPEKMGQAARATIAKLVFALLTGNAIAQDGKKLFDGSHKNSFDNAALDVANIDKAIQMMNGFVNTRGEPLAIEPDFMLLPTSLYTRAKQVLGSASVEGADINSGIINPIRDIVPTVKSARLQVADPKSWYLINKEAIEVSYLDGIDTPYMEQQQGFTVDGVSTKVRIDAGVNVIDYRGIVKVTNK*	hallmark_hmm	common_virus	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0010	shell	direct	high	2027	1.0	GCA_001058435.1_01520
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	8978	9301	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	8979	9302	GCA_001058435_1_33_11	GCA_001058435_1_33_11	+	82041	.	COG5471	Predicted phage recombinase, RecA/RadA family [Mobilome: prophages, transposons]. 	MSKNYLQDGNTVRFTATADVKSGDVVMLENLAVIAVSHVAQNETGVGLTTGVFTVKAKAEDDIKQGAIVYWSATDGATITAGSNKRLGIAWNASGVSMGTVDVKINA*	mmseqs_cdd	nonviral_gene	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0011	shell	direct	high	323	0.997	GCA_001058435.1_01521
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	9282	9593	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	9283	9594	GCA_001058435_1_33_12	GCA_001058435_1_33_12	+	82041	.	pfam13856	ATP-binding sugar transporter from pro-phage. Members of this short family are putative ATP-binding sugar transporter-like protein.	MSRSTLSPFDDALAQADKVISDVMMSVYVINGKKYKAVLDESPKLMSGNYTDDYLINGTTRTLTLFKASGYKPKLGDIITSSTEEYVVRGFSFEDKKIVLQLE*	mmseqs_cdd	nonviral_gene	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0012	cloud	direct	high	311	0.997	GCA_001058435.1_01522
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	9596	10126	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	9597	10127	GCA_001058435_1_33_13	GCA_001058435_1_33_13	+	82041	.	PFAM:PF06763.10	minor-tail-protein	MAVKIEGMAALQANIQKLANQVAPKAAAKAINKVARSAIKNGTKNVSKEIHVPAKLIRKRARLSQKATANRPVAKIRVDRRNLPLIRLLENPRRTMRASKGQIRIGKYQIQRGFIQTLANDRKHVMQRQGKERYSIDVVKIPLSRPLTTAFHNELKDYSSQIKVELTRELSDIFKK*	hallmark_hmm	common_virus	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0013	cloud	direct	high	530	0.998	GCA_001058435.1_01523
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	10135	10545	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	10136	10546	GCA_001058435_1_33_14	GCA_001058435_1_33_14	+	82041	.	PFAM:PF06141.10	Minor-tail-protein	MLIHKKIRHQVSDMLKSSIKGVENIYSGRPLFIDIDQEKTAIAVFLDEISCEEVDLCHHEYTAALNIAIYLKTALGDDALDDIADKIKERLSVAISHDELSENISEMTLISYEYEQDTTNRTWFVSNLKYQIKYED*	hallmark_hmm	common_virus	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0014	cloud	direct	high	410	0.998	GCA_001058435.1_01524
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	10548	11198	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	10549	11199	GCA_001058435_1_33_15	GCA_001058435_1_33_15	+	82041	.	PFAM:PF06199.10	major-tail-protein	MPTQTTPFQGTKFYLGTGLTEGKAVTAVTVKPNATITSAGHGAKVGDFIKLTGLGALDGYYPVKVVTNDLITLADEVDWTSQDAPASYATAKVAIVKWSSNFCAIKQIEGDGDTLGEEDITTMCSEGTETEAGEIEYGSIKLTFFYAPATAMQADLRKKFYAKETFPWMMILKNGQGSLYGTGFIQTSPNFSGEVKGKFESGVTIKKAKRDYHLPA*	phrogs_hmm	hypothetical_protein	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0015	shell	direct	high	650	0.998	GCA_001058435.1_01525
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	11473	11880	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	11474	11881	GCA_001058435_1_33_16	GCA_001058435_1_33_16	+	82041	.	PFAM:PF16462.4	tail-assembly-chaperone	MNLREKLLANKPKITSIIINGENYYIREFTVGEMNKALYGQQQELVRIAESQGITLDFSDEDTLTEQLAKVYDKHKLTRTIAMRLCDENGVNLFNAEDENDLEQLAQLDKAVIEQLNQAIMDGEPKNSPAEESSK*	phrogs_hmm	hypothetical_protein	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0016	shell	direct	high	407	0.998	GCA_001058435.1_01527
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	11925	12149	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	11926	12150	GCA_001058435_1_33_17	GCA_001058435_1_33_17	+	82041	.	pfam13227	Protein of unknown function (DUF4035). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 67 and 93 amino acids in length.	MPESHLQEYRLFYEEQPFGLWRDDYRSAQISHVLAMVNRDPKGKPPELSDFMPFYKDKKEEEFDDGSAEYLANR*	mmseqs_cdd	common_virus	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0017	cloud	direct	high	224	0.996	GCA_001058435.1_01528
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	12161	15265	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	12162	15266	GCA_001058435_1_33_18	GCA_001058435_1_33_18	+	82041	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MAGSLGHLNIQLELDQVKFQSGINNAQGRVKRFTDTTTKQLNNIERSMNSLNRVSANLFKAGIAGFGVNQLKGFADGYTEIQNKLRLVESASISSSKGLNNVFDIALKTNQSINATSGVYQRFAQNAETLKISQAQIASLTETVSKAVAVSGASAGAADAALTQFGQALGSGILRGDEFNSVMEQTPALAKAIATGLGVTTGELRNMAKEGKLTMDVLVPALERAKESVDDQFNTRILTISAAFENLNTSTVKWIGELDKSTGASEAFAKAINEIANHLTIVASLAAGAGVIWSVGKIRTWIAASIQASAAMSAQAAATRNLTAAQQALTATGKGLGGALGFVGGPLGLLTLGLSAGVGVFLDYQQKTETARQELLSFADSLDVTTGKLANTSAAVLDGMRAKLEQSITAQKDEIKRLEEEYEKLNRIVEQGKQIAQQSGKAEDSAYLEALAKATQDLAIKKAELAKANEKLTKSEDDLKTIIGQVPVAEFNDKLKSLLPTLDMSKVNIDNIGFSLDDLNRIFPSAESGAASITSAVERMGAMAILVASQFDALGFSVQNALSDKATKLIERNNRQIAINKEKDPTKKRRLQAEDNALNSGFEKDSADFSAVVDSNFALLGSQAEAKAAKKAKKSGGSKVDYVKQFTDQLSEMERRLSEIRANAQDISVFGQVSQYQELNKITQDIAANGEKYAHFGADGLAKLKDMAAQIDAAQQVVSINQFTFDNSEKLRAMEFELTLLGKTRQEQELMQYNHQLDLEAARLKNGMSQKNIAKLDEEIAKLKERRGIIQQQTEESRGSAILGFQQGMKTIEDQVSDVAGNISNITVNAFNSMSDALTDFIMTGKTDFNSLAKSIIKDIVQMTTKMMIFASIKAVLEGTSFGKILGFSGGGLVPELKYTGGLVGFDEGGFTGIGGKYTPAGIVHKGEYVITKEATARLGRGFLDHLNYGSVSRGFANGGGVGVPRLPTMAYQPKSSGNIAVKVINNGEPMDATVSQQSKNGQLEITVELVRQIAQAEAGTMLQKNMRPGGLLS*	hallmark_hmm	common_virus	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0018	cloud	direct	high	3104	1.0	GCA_001058435.1_01529
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	15274	15606	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	15275	15607	GCA_001058435_1_33_19	GCA_001058435_1_33_19	+	82041	.	PFAM:PF05939.12	minor-tail-protein	MALKTLPWCPQPKYTVEEEPRRKVINFGDGYQQRMVDGLNPLLRKFNLTYKLNHKSAVEFDRFLTSHGGVTAFFFREYENGDLIKVVCPKWSKTVTKRHTEISCTFEEVV*	hallmark_hmm	common_virus	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0019	cloud	direct	high	332	0.997	GCA_001058435.1_01530
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	16084	16386	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	16085	16387	GCA_001058435_1_33_20	GCA_001058435_1_33_20	+	82041	.	.	hypothetical protein	MKNCVVIVKKSALELLCKNYPQFSLRKWFDVQSQQFLITIEELSRNYSNVICYDGFEKSNEVHFTYSGDYQLTNFFTYYRIEFSFSETEMVALNQPLLGF*	.	hypothetical_protein	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0020	.	unmatched_CDS	none	0	0	.
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	16487	16945	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	16488	16946	GCA_001058435_1_33_21	GCA_001058435_1_33_21	+	82041	.	PF04352.13	ProQ/FINO family	MGRKDNIKANLAKLKERFPNVFFDTKPLVPTIIDDMLAVLGDDELSKVVRSAMRYYLDSPSYLKRFVRRKWIRDVNGSKVRLITAEEKQLARERLNQINEHNSKANAEYRFAIALARETKIEYKKVELLEQKNPEKSKVVVIHRRTPKIKSE*	hhsuite_tools	hypothetical_protein	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0021	cloud	direct	high	458	0.998	GCA_001058435.1_01532
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	17281	18171	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	17282	18172	GCA_001058435_1_33_22	GCA_001058435_1_33_22	+	82041	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MSNQISTQTISFNNQSLITVEQNGNHYVAMKPICENIGIDWRAQRQRIVRDEVLCSTVVIITTVAEDGKNREMLCLPIQYLNGWLFGIDINRCNPEIRDTLIKYKKECYQALHDYWFNGKAERKTTVDDRTGLRNAVNMLVSKKGLIYSDAYHLIHQRFNVESIEDLTLEQLPQAVEYVHKIILEGELITDLELPSSEKKFSFEFTEYELQQLAWLWFAFKRGVGTFQHIERAFNVLGSNMSGQIYGQAYEYLSVLRSTNKILNRITQQFEIDQMTNWRALEHLRKFDQKAVKIDF*	common_virus_hmm	common_virus	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0022	cloud	direct	high	890	0.999	GCA_001058435.1_01534
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	18256	18969	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	18257	18970	GCA_001058435_1_33_23	GCA_001058435_1_33_23	+	82041	.	PFAM:PF05100.11	minor-tail-protein-	MTALLPELEQGALIELWEIDLRHISSSAEPSTKGELLRFHNGLNQSQVNLWWQGNEYQAYPIKADGFEISGQGPSNRPTLTVSNLYGLVTGIVAHFGQGVGAKVTRRLVYAEHLDAKNFPGGVNPNADPNQEVRSYYIIEQLKSLDDQQATFELASPAETDNAKIPLLMITSDTCIWQYRSAQCGYTGGAVADEFDKPTSDIKKDKCSHCIRGCKLRFGDNAILPFGGFPSTTQYGN*	hallmark_hmm	common_virus	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0023	shell	direct	high	714	1.0	GCA_001058435.1_01535
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	18972	19730	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	18973	19731	GCA_001058435_1_33_24	GCA_001058435_1_33_24	+	82041	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MIDDKLKQEILAHAEQCKPQESCGFVVFDGKQNIYIPCVNISPDPINYFEIAPEEFIDAEEIGKIIALVHSHPSFNDERGLPYLSTADRECQVRLDLDFWLVVDGDIKCFRNVPPLIGRQFENNKQDCRNIVLDSYMLSGIDLDDKSIYPFDWFKSSNLYEEGLQRCGFYKLMQEDDVQLGDIILIQVGADVANHAGVYLGNQMMIHHSEDRLSARVPYNGFWLKHTHSIWRFRDWYKLNFTVILNDLQIAR*	mmseqs_cdd	common_virus	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0024	cloud	direct	high	758	0.999	GCA_001058435.1_01536
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	19676	20263	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	19677	20264	GCA_001058435_1_33_25	GCA_001058435_1_33_25	+	82041	.	PFAM:PF06805.11	tail-assembly-protein-I	MVQVKFYGDLKRFADSPIELEVSNFKELMSGLFTQIKGLRQHIRKGYYKIRVGSKYLSEEQLKTTPIIDLKDGCTVHLTPVVAGAGKGGNVLQIVAGVVLMVIAWYAPPAWGMAATMMGAMGASLTLSGVVGLLTKPPSMSDYSKEGEKKQSTSFSNIKNLTPQGRPIPLLYGKMLTSLVLISQGVETFDDMPTK*	hallmark_hmm	common_virus	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0025	cloud	direct	high	587	0.998	GCA_001058435.1_01537
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	20323	24186	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	20324	24187	GCA_001058435_1_33_26	GCA_001058435_1_33_26	+	82041	.	PFAM:PF13550.5	tail-protein	MGGSSKGGGGHTPHEAPDSLRSAQKLRAIGLISLGPIKGPANKWKDTYFDNTPIQNANGVDDNDAASFNFKNTEIQYNLGYQDQKPLEGFEASEREVSVGAEVKQQHPITRSVIDPDVTRLRLTIGINALISQNDQGDTNGTSVDFQILINNTPRGTYQIEGKSSSRFYRSYVIDDLPPRPFTVTVKRVTADSKSQRLQNGTHWVSYTEIIDTKLSYPNMAIVGIKTDSRYNPNFPNINFLLYGRIIKIPTTYDPEARTYAPGLWRGDFKLGWTNNPAWIFYDLITDKLAGLGERIGDFGIDKFMLYEIAKYCDELVDDGYGGKEPRMVSNLWITEQRDAYNVISDMASVFRAIAVWDGTQFTAIQDRPTDPVCLYSQSNVVDGKFSRQYTAGKAIFTAVEVEYADERNLYQKAIEYVADDSMIARYGYNVKKMTAYGCTSRGQAHRYGKWVLETSRLEQCTITFAVGRQGLMHLPGDIIEVADNNYAGKVLGGRVVAISGKKVTLDQPVEIKGESYLNYITTDGLTKIKIKSVDKVNPAIVELDSVPQGLSIFDNWVLKSGVVSTQLYRALGITENDDGSYTITALQHEPQKQAIVDGSASFVPSVTTAHGAGVNKPANADISFGDGGVKLTWTTPTNQGAVKYDIKLYRNGNLYSTHLDLDSPEISFDNLPSGSYTVEIRGKNGLGQLSDPVTRTFEINLNIPRFVTKSLLFAIELDWDLPKTATVGNYTEVWRGATNDISKAVKVATLPYPQNNYVMSGVPLSAEYYFWLRCGDKNDNKGEFTAAVFGEADHNPDNLLNALEGKITKSQLGQELINSIKADINNAVGEEAKTRQTAVAGALAKIAAQAQSSGTAIKNLEKADQAKAETIKTVTAKAESALSGITAVRQAQAQSDKANAQQINALTAKVGNAESTVSQVSSVVAGLNGKVSSMHTIKTQAIAGGRTAVAGIALGANHEESSVIVMADKFGIVANANDGNVKPVFSVADGQVGIRGDLVVAGSVTRDKLSAGSGGNLLYNPIFANVGGDGLPHGCNWWGSSTAINLRADSKQANDAWGLTYYLPGENQLIFNIDGDSSASGTVAMQSAPVLGDKWYILSAYIGAHRSKAKLTARCHFKEGGYKDFSSEDIIGYSFRGGLSGYTKRAFVKIKAPSNAERITPIFWVISNSNESGKHLRVARPMLEECTEYTTEPSPWQNAGVTEVHGGSIIANTIRGNHIMANQEIRAPRITGGEIDISGNDGILRVGRTGNFLVRASSQNRGLVMNNDQIIVYDDRGNVRVKMGRL*	hallmark_hmm	common_virus	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0026	shell	direct	high	3863	1.0	GCA_001058435.1_01538
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	24186	24629	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	24187	24630	GCA_001058435_1_33_27	GCA_001058435_1_33_27	+	82041	.	.	hypothetical protein	MANYGFEVCNADGIIRDKVTSKFARIIAKLHVPLIVAYDYAYQKAGSGSFIVNELLNIPKGYIPFYFISPAELNGCFYPNVKISGNLISWDFYIYDRELFPRNYDKKNGVSDLFGDNPVGFDSTDVAPKRTAIFGGCYINVGICPDA*	.	hypothetical_protein	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0027	cloud	direct	high	443	0.998	GCA_001058435.1_01539
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	24622	25407	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	24623	25408	GCA_001058435_1_33_28	GCA_001058435_1_33_28	+	82041	.	.	hypothetical protein	MLKISSEDAINIIDDTYKNYHLRKSGVLYDKDFEINGMTKDCYIPCVGFNSPIIVIHPRGHDYNSKVTYVPVSRNMTNKDYINSEYRNTFGFQIYVWWNLHVNEGIEYYIFDDWQPETAKYGLTLWNEKGEIIYHSDWYRLKLLGMHQLGRAGPSISNDLKIDISKFSNLSNKVGILMPFVRRCMMGGLPGQYLPPAGGHNTFNNYELGEGFFFKDKNTIQYSWVCLSGIDGWWFSWDQIITPPSSFILTVDLDGMPLNYN*	.	hypothetical_protein	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0028	cloud	direct	high	785	0.999	GCA_001058435.1_01540
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	25530	25895	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	25531	25896	GCA_001058435_1_33_29	GCA_001058435_1_33_29	+	82041	.	.	hypothetical protein	MSNHCAVFYWSKKMKYITKQIEDIRTGAMSEHHAVTGLQVDYVNNSTFVTIASYVSKAKKDEGKDSLSVNTFTIQAVPDWDKIPYEWALGELVKAQPEDFSPETYIGYVNPYMFAGGKVEQ*	.	hypothetical_protein	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0029	shell	direct	moderate	326	0.891	GCA_001058435.1_01541
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	26225	26848	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	26226	26849	GCA_001058435_1_33_30	GCA_001058435_1_33_30	+	82041	.	PRK11630	threonylcarbamoyl-AMP synthase. 	MSQFFYIHPENPQARLINQAVEILRQGGVIVYPTDSGYALGCMIGDKHAMDRIVAIRKLPEGHNFTLVCSDLSELSTYATVSNSAYRLIKNNTPGRYTFILTATKELPRRLMTSKRKTIGLRVPDNQIALDLLNALGEPILSCSLMLPDNEHMTYSDPEEIREYLERQVDLIIHGGYLGQEPTTVVDLTEESPVILREGSGRTAPFI*	mmseqs_cdd	nonviral_gene	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0030	persistent	direct	high	623	0.998	GCA_001058435.1_01542
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	26888	27898	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	26889	27899	GCA_001058435_1_33_31	GCA_001058435_1_33_31	+	82041	.	PRK10700	23S rRNA pseudouridine(2605) synthase RluB. 	MKPIQKPVRQEREKQAGKQPHFERKERKNAVNSDIKSPPKAKVAKPSRQSTVEGEKLQKVLARAGQGSRREIEAMIAENRVSVDGKMATLGDRIDVHSGVKVRIDGRIINLQQAQKEVCRVLMYYKPEGELCTRSDPEGRATVFDRLPRLNGARWIAVGRLDINTSGLLLFTTDGELANRLMHPSREVEREYSVRVFGQVDDAMLARLRKGVQLEDGPANFKEIKFAGGVGINQWYDVTLMEGRNREVRRLWESQGIQVSRLIRIRYGNIKLMKGLPRGGWEEMDLENVNYLRELVGLPPETETKLDVTKPRRRPKSGQIRKAVKRYTELSKRYKK*	mmseqs_cdd	nonviral_gene	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0031	persistent	direct	high	1010	0.999	GCA_001058435.1_01543
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	27911	28882	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	27912	28883	GCA_001058435_1_33_32	GCA_001058435_1_33_32	+	82041	.	PRK12681	HTH-type transcriptional regulator CysB. 	MKMQQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFERNGKHIKSITPAGKKIVAIARELLVKAQSIKSVANEYTCPNHGVLRIATTNTQARYMLPAVVERFSKQYPDVSLHIHQGSPTQIHDALISGEVDLAITTEAPYLFDDLIQLPCYLWNRSVIVKPDHPLAKVKNLTVEELGKYPLVTYTFGFTGVSDLDYAFNRAGILPNIVFTATDADVIKTYVRLGLGVGIMASMAHTPADKDLVAIDAGHLFRASMTQIAFKHSTFLRNYMYDFIEFFSPHLTRPMVEKAEKLRDNSAVKKLFDNVELDVK*	mmseqs_cdd	nonviral_gene	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0032	persistent	direct	high	971	0.999	GCA_001058435.1_01544
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	28943	29344	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	28944	29345	GCA_001058435_1_33_33	GCA_001058435_1_33_33	-	82041	.	PF17500.2	Colicin-K	MSFLSKTLGGLSKAYYIRQFLFGLIFFAFMVVMGYDSYSRTGNPSIFLTNIILGLVCLFLYPYSRFVYESIIEYILGNNAFFVNAVLMLIIKFITMMLCFMFAIFIAPIGLTYLYFYHSKQEKLQNQTQNEKQ*	hhsuite_tools	hypothetical_protein	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0033	shell	direct	high	401	0.998	GCA_001058435.1_01545
GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote	cenote	CDS	29408	29662	GCA_001058435.1	JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435.1_JUTJ01000034.1	GCA_001058435.1|JUTJ01000034.1	GCA_001058435_1_33	GCA_001058435_1_33@C0	29409	29663	GCA_001058435_1_33_34	GCA_001058435_1_33_34	+	82041	.	PFAM:PF10078.8	transcriptional-regulator	MTKLRLSIHSDEYIWLRELLLNRRKELGLSQRAFGEKLGVVHSFIGKVETGDRRLDVFEFIEYCKGLDLDPIQVLREIEEKFRV*	phrogs_hmm	hypothetical_protein	C0	29663.0	0	29663	GCA_001058435.1|JUTJ01000034.1@region_1_29663@tool_cenote_CDS_0034	shell	direct	high	254	0.996	GCA_001058435.1_01546
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	8860	10266	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	1	1407	GCA_001058435_1_35_9	GCA_001058435_1_35_9	-	222275	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MASQRQIQSSDQKTEQVSIPPHSTEAEQAVLGGIMLSNQHWDGIAERVIAEDFYTFAHKAIFQTMEELMRNQTPIDLITLDQALKAKGISDSVGGFAYLADLSNNTPNAINILAYAEIVREKAILRELIAVGNRIAENSYSPKGKDIKMVLDEAEREVFAIAEKRSSSTEGPQNVISVLESTIARIDTLSKLENHSGVTGVTTGFVDLDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAAMASDKPVLVFSLEMPAEQIMMRMIASLARVDQTKIRTGQNLDETEWSKIASVFGMFKQKNNLYIDDSSGLTPTELRSRARRVYRENGGLSMIMVDYLQLMRAPAFSDNRTLEIAEISRSLKALAKELEVPVIALSQLNRTLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSEDKGVAEIIIGKQRNGPIGRVRLAFNGQFSRFDNLAEQREYRDDY*	rep_hall_hmm	common_virus	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0001	persistent	direct	high	1406	0.999	GCA_001058435.1_01809
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	10416	11852	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	1557	2993	GCA_001058435_1_35_10	GCA_001058435_1_35_10	-	222275	.	PRK05826	pyruvate kinase; Provisional	MSRKLRRTKIVCTMGPATDRDNNLEKIIAAGANVVRMNFSHGTPDDHIERAERVRAIAKKLGKTVAILGDLQGPKIRVSTFKDGKIFLNVGDKFILDAELPKGEGNQEAVGLDYKTLPQDVVPGDILLLDDGRVQLKVLSTEGAKVFTEVTVGGPLSNNKGINKLGGGLSADALTEKDKADIITAARIGVDYLAVSFPRSSADLNYARELAKQAGLEAKIVAKVERAETVVDDASMDDIILASDVIMVARGDLGVEIGDPELVGVQKKLIRRSRQLNRAVITATQMMESMISNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPAETVATMARVCLGAEKMPSINVSHHRLDREFRDIEESVAMSAMYAANHLSGIAAIITLSHSGRTPLLMSRISSGLPIFALSRVQETLNRCALYRGVTPVHFDGESRSSAGAKAAINLLKEKGYLVSGDLVLLTQGDESEGTTNVCRTLTVE*	mmseqs_cdd	nonviral_gene	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0002	persistent	direct	high	1436	0.999	GCA_001058435.1_01810
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	12347	13564	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	3488	4705	GCA_001058435_1_35_11	GCA_001058435_1_35_11	+	222275	.	PDB:1Z19_B	Integrase	MPRVTKPLTNTEVDKAKTKDKEYNLSDGNGLFLRIKPTGAKAWIFNYYHPVTNKRTSFTIGTYPAITLAQARQKREEYRALLAQSIDPQEYIKEQELIKNGQNENTFYKVALLWKEKRSKEIEPMTMEKNWARLENYLFPTLGNYPIDDISSPLLIKTVRQLNEKGFNDTLHRLLNLANQILNYAVTIGLISFNSCLKASDAYHKEPQKHHPAIKPEELPKLLQDFKNSSRDHLTKVLFRWQLLSMVRPAEAVSVEWSEIDFDKKLWTIPAEKMKKTRQGAFPHIVPLSSLMMDILKELKPITGDDKFVFSHYHKPNQSASKELIANALRKIGYKGIQDAHGLRSIARTFLENQQVDFRIAESCLAHSIGNKTSQAYNRYDYVELRRPVMQLWSDFVEQCEKESV*	common_virus_hmm	common_virus	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0003	shell	direct	high	1217	0.999	GCA_001058435.1_01812
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	13737	15506	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	4878	6647	GCA_001058435_1_35_12	GCA_001058435_1_35_12	-	222275	.	PFAM:PF04735.11	DNA-helicase	MARLINAPHLADQPHEPYSDLFVLAGSKAWKAWDDGKGEEWLLLCSLVEGLESKQKPVILGENQLNNISLTRIAKEDQQLVKIAQYGELKQEEITAICQNLAKNTSAREVKLIDAAAQVKEDLSSYIQRLRTDKKTADLATQLAPPEKLKENDGVNKKARALTKWLNMDLALNPKDRELYRYDGISWQLVDKFEFLDNAVAFFDEQDFNYSARSIESIIDTIKIQSPKMGTQAQELIAFNNGTLNRTTLEFLPHYRENWLMSYIPHEYLNSAQNTPYFDKWLEFVSGGKESKKNAILAALYAVLTNRNDWQLFFEVTGDGGSGKSVFANIATLLAGEQNTESGRLIDLDEPRGRENFVGKTLLICPEQSRYGGDGGGLKSITGGDPVNIDPKHRTKFKAVIPAVVLIVNNEATRFTERSGGIERRRVIFHFDKVVPENERDPNIMDKIEREVGGIIYKLIHTFEQPETAKAALKEQQTSDEALEIKSESDHITEFCGYFYTTPQNDGLYIGNANQVNKSRTHLYPAYLAFAVASGITNTLTLRNFSNSLKQGFAQHKNKFEFSKVKGKYGYRSNVHFKNYEEFQNEFNS*	rep_hall_hmm	common_virus	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0004	shell	direct	high	1769	0.999	GCA_001058435.1_01813
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	15490	15933	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	6631	7074	GCA_001058435_1_35_13	GCA_001058435_1_35_13	-	222275	.	.	hypothetical protein	MNMNEKLDYSNLSAVELKAIMYSQMNCEKKEGEAHYLPLPYLGETIVTLAEIFESYPSEKLYTLRNLHDELLAVNKHLLQLAPNPPSLNPEEIVASLTNDEIIDGLLKSSIVISLVETLTYFQKVVAERIDDIENGVLKGVNNGSIN*	.	hypothetical_protein	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0005	shell	direct	high	443	0.998	GCA_001058435.1_01814
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	15935	16438	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	7076	7579	GCA_001058435_1_35_14	GCA_001058435_1_35_14	-	222275	.	.	hypothetical protein	MKPNNPMEQLKQWKAASDKNLVSSGEKRHQLQKAPPVAKSATGNEEQKTEKRKGKLFFNPLALKYSQISRQFQLIQDSNKRCLEVYPGDFHHKIKFRDEIVDLMNKLAGGGNLLNALAKEGNLSREDTAKLKYFNQANKYLLYKFSEVVEQIGALNSERAEQQKGSK*	.	hypothetical_protein	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0006	shell	direct	high	503	0.998	GCA_001058435.1_01815
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	16425	16631	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	7566	7772	GCA_001058435_1_35_15	GCA_001058435_1_35_15	-	222275	.	.	hypothetical protein	MKAKKIKAFKEPYVPTPEQLEKACKRIKQFLAFAEDYLHTGHYKGLAASIEQIKKAATIRKVARNETK*	.	hypothetical_protein	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0007	shell	direct	high	206	0.995	GCA_001058435.1_01816
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	16621	16818	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	7762	7959	GCA_001058435_1_35_16	GCA_001058435_1_35_16	-	222275	.	.	hypothetical protein	MSNTKFPYTLVFTYDDGDQFIAGEYGTLREALQAKIRCKHEIGQADICGRVLEVITILKGEDNES*	.	hypothetical_protein	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0008	shell	direct	high	197	0.995	GCA_001058435.1_01817
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	16818	17147	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	7959	8288	GCA_001058435_1_35_17	GCA_001058435_1_35_17	-	222275	.	.	hypothetical protein	MLSYGTIQMALQDVVNSNDVSEQTLEKIRTESECLCESIEYGLMELGDMVSRLGHFADSKQDFDNRAMSNDNVKHIGALIQANAYFLNTLRNVSTDATYHLNGGNKGAK*	.	hypothetical_protein	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0009	shell	direct	high	329	0.997	GCA_001058435.1_01818
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	17140	17739	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	8281	8880	GCA_001058435_1_35_18	GCA_001058435_1_35_18	-	222275	.	NF033153	"host cell division inhibitor Icd domain. Icd from temperate phage P1 inhibits cell division in its host. Homologous sequence is found in many other proteins, often as the C-terminal region of what appears to be a much larger protein. Putative phage proteins that contain this domain may be designated ""host cell division inhibitor Icd-like protein"". See PMID: 8491703 for a description of Icd. Many proteins with this domain also have the Ash domain described by pfam10554, which also occurs in phage."	MNLIHKYYINNEIFYNSNPLQSAVKFGIISPQSEKVIASRGKLNYLLLANDSTPLNCAFFVRDIRTPKEYADFVFNLNPIILSMVERNEPSLTGCFPVETVFHLVTFYRPTVESLAVVPENLLLELTQMYQFIFAAIRRTDLSNHLQKIRITADNERNARAKLAREFVLVLAGRINLQSDRTLSANTFRSISFAEVVHA*	mmseqs_cdd	nonviral_gene	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0010	shell	direct	high	599	0.998	GCA_001058435.1_01819
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	17830	18033	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	8971	9174	GCA_001058435_1_35_19	GCA_001058435_1_35_19	-	222275	.	COG3311	Predicted DNA-binding transcriptional regulator AlpA [Transcription, Mobilome: prophages, transposons]. 	MNLNLNPNQKLISGETACHIVGFGRTKLNLLVKAKKFPQPIRFSQNFVRWDLEEVNQWIEEQKAARA*	mmseqs_cdd	nonviral_gene	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0011	shell	direct	high	203	0.995	GCA_001058435.1_01821
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	18221	19219	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	9362	10360	GCA_001058435_1_35_20	GCA_001058435_1_35_20	-	222275	.	.	hypothetical protein	MLNLPPRKEYTLNQALEYLRKFHNEDRIDKEDLLYHAKEGNLKTVVFINGGRDLYNSVRGDYFTISRINRKELTELWLLDNDVKIIENNNLNVEKEIHLSTVYALANEYLGTWFAIPKTKRMTKYPLQNILIGKNVDDDLRKLSPINEFEFGGYFRVDPSDYGQDLQEILDSNVIYKKGYNEFEITEHSNAYFSFMLSPENTYCELPISIDDILILHDDLMDFVGLDSRLTNDPKKEIEKLKKEIEEKQKIIDSLRLINPKGRISSPQKQLFALLVKRCYSDIKSRNKLFDVINADLKSLEIRNDDISADTFYKLIDESNDIIKAIFPPKKS*	.	hypothetical_protein	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0012	cloud	direct	high	998	0.999	GCA_001058435.1_01822
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	19609	20064	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	10750	11205	GCA_001058435_1_35_21	GCA_001058435_1_35_21	-	222275	.	PFAM:PF04883.11	tail-component	MGSFSNAIEQFRIKIENQLMTEQPKAIKKALNAAAQVLKDEIKPIVPTLSKSTDFRKKGTVKNNVRHRTRLFKDKSGGVTIVRIRRTKGRRMASVRDNTKDRTDPFYWFMLDRGTKKMSGAHFMERAWGKGKSRAINTAKKVFISEMKKLN*	hallmark_hmm	common_virus	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0013	cloud	direct	high	455	0.998	GCA_001058435.1_01824
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	20075	21742	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	11216	12883	GCA_001058435_1_35_22	GCA_001058435_1_35_22	-	222275	.	CDD:COG4626	Large-Terminase	MAIWHEYAEKIQSGEIVACKKIKQAVTRYFNDLNNPDYFFDQSAVEKFIAFSKLCPHVKGHLRGEPIILSDWQVFLFANILGFKRKDTGLRKYRSAYVQVARKNAKSTVAAVLANWFLVMEGGQQDIYTAAVSRDQARIVFDDARQMCLLSPLLKKRLNIQQHKLINPKNNSIMRPLAAKSSTIEGTNPSLAIVDEYHLHTDNSVYSALELGQGARPEGLLFAITTAGSNVISACKQHYDYCAQILEGNEQNDSLFVLIFELDEENEIDKQENWIKANPNIGKSIPYLDFENTIKKARGIPSEWVEMLTKRFNVWCQGTTPWLGEGNWAQCERQYTESDLLHQDCYLGLDLSSTNDLTSLCYTFPQGKKVRLVTRHYIPEFQLNNVANKNRAMYRNWVRSGWLIATEGDCIDYDKIRDDILKDAQRFNIKMIGFDVWNATHLRTQLQAAGLEVEPFPQTYQRFSPVAKSAEVLINRQMIEHHGDPVLTWALSNVVMETDANANIKPNKKKAANKIDPAVAFLMSFGTYQLEYDDLIFELSDEHKQALEQFNGIDL*	hallmark_hmm	common_virus	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0014	shell	direct	high	1667	0.999	GCA_001058435.1_01825
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	21750	22124	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	12891	13265	GCA_001058435_1_35_23	GCA_001058435_1_35_23	-	222275	.	CDD:COG3747	Small-Terminase	MTAKKKNLHTPPSFLDPIAKSVWKERIPQLLERGDIQDADLIHLELYCVNYSLFRAAVEDIHKNGFSIVNSQGTQSRNPALSAKADAEKVMVKMSSLLGFDPVSRRKNPVEVDSTDMIDEILTM*	hallmark_hmm	common_virus	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0015	shell	direct	high	374	0.997	GCA_001058435.1_01826
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	22445	22801	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	13586	13942	GCA_001058435_1_35_24	GCA_001058435_1_35_24	-	222275	.	PDB:5H0M_A	HNH-endonuclease	MPYQPLRRCSYPGCRNKVKSGRCEEHKPKDNRPNSSARGYDHKWSKYRAQYLKHHPLCVMCLEKGIYTPATVIDHIKPVENGQAAPLFWVESNHQSLCRDCHSYKTRVIDQRGFGAKK*	common_virus_hmm	common_virus	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0016	.	unmatched_CDS	none	0	0	.
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	22812	23126	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	13953	14267	GCA_001058435_1_35_25	GCA_001058435_1_35_25	-	222275	.	CDD:TIGR01560	uncharacterized-phage-protein-(possible-DNA-packaging)	MANINLTLDEIKAHLNLDHDLDDELLEAYKAATLEVCKKHIGKTFGDEETENTVPFTPSIKVGCLMYIAYLYTNREAITDLANLKQAPMTISALWEVYREPCAY*	hallmark_hmm	common_virus	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0017	shell	direct	high	314	0.997	GCA_001058435.1_01827
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	23113	23463	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	14254	14604	GCA_001058435_1_35_26	GCA_001058435_1_35_26	-	222275	.	PDB:2KZ4_A	Head-tail-adaptor	MAVMLKAGKYNKVITIEARNYPRERETNLHGERKAFWRHIATVRASVEPLQGREYFSGPFQMGENIIRIRYIEGITNKMRIKYGKRLFDIYSVIDSMESHRELQLMCKEGEAYGEY*	hallmark_hmm	common_virus	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0018	cloud	direct	high	350	0.997	GCA_001058435.1_01828
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	23447	24679	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	14588	15820	GCA_001058435_1_35_27	GCA_001058435_1_35_27	-	222275	.	CDD:COG4695	Portal-protein	MWNPFRRKEQRSEPTTIEELLSYMGVNNTGAGEFVSPQTAESLPAVMNAVTVISEAVASMPCYLYALKEDGRERIYRHPVEYLLNEMPNRSQTPYQFKNTMMRHCLLNGNAYAVIEWNNKGEPISLTPYQPSAVNIFRKVTGEYIYQITDLNGVTKNYLQDEILHLRHSSVDGFMGRSPITVCRETVGLGLAQQRHGAAIMKNGLMASGLISTAEWLDDAKAQKAVKALERYKGAKNAGKTPILEGSMEYKQLGMTNQDAEWLASRTFTISDIARIYNISPIFLQDYSNSSYANFSEASRAFLSQTLRPWLTNFEQQLKDALMIDLGSNSKKRHLIEFDTSDLLRTSQNERFNSYDVAIKAGVMSPNEVRRREGLPPYAGGDEFSQAWKQTVEVKRGDEQEQGASNGSDA*	hallmark_hmm	common_virus	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0019	shell	direct	high	1232	0.999	GCA_001058435.1_01829
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	24681	25247	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	15822	16388	GCA_001058435_1_35_28	GCA_001058435_1_35_28	-	222275	.	CDD:COG3740	head-maturation-protease	MKKEFEIRSATISTDEENQKLIGYAVKWNSPSQVLYCDFVESFAPKAFSESLASGEDVRALFEHDYTKLLGRTSAGTLKLEEDSIGLRFELTPPNTTIGKDLLVSVSRGDITGMSFGFRASQEEWDFDVEPCQRTVQKAELFEVTVTSIPAYPESSVEIAKRSMVAAKEKTQEHSTALLKQWLDVMEA*	hallmark_hmm	common_virus	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0020	shell	direct	high	566	0.998	GCA_001058435.1_01830
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	25292	26482	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	16433	17623	GCA_001058435_1_35_29	GCA_001058435_1_35_29	-	222275	.	CDD:COG4653	Major-Capsid-protein	MLKKLIELRQQKAEKVAEMRAMLDKAEKENRSLDETESVDFDKLKDLVKQLSDEISKYETVADEERNLGAQSNPLETRSTKQFSNDELRHYIKTGELRNLTTANGEDGGYSVIPQLDKEVMKRLTDDSVMRQLCNVVRLPIGAKEYKKLVSAGGATVEHGTEGTARNGTATPKLHEVTIALNSIYAYPKTTQEILDFSSIDVLGWLTDEITETFTETEEVDLTSGDGNKKSKGLLTYERTTENDKVRPFGKLQKIEVAGAAKIEADTLIDAFYTLHSKYRKNAVWVMSSTIAAALQKLKNKNGDYIWRDGLTTDAPATLLGRPVYFLETMPTGGANQAVIAFGDFKRGYFIVDHETGVRTRPDNLTEPGFYKVHTDKYLGGGVVDSNAIKVIETTA*	hallmark_hmm	common_virus	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0021	shell	direct	high	1190	0.999	GCA_001058435.1_01831
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	26497	26904	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	17638	18045	GCA_001058435_1_35_30	GCA_001058435_1_35_30	-	222275	.	PFAM:PF06141.10	Minor-tail-protein	MLIHNEVRNEIVTLIKNNIPEIGNVYNGRAFFTSLKQQLPAISVFLDDAECDFKVMGESEWQAELNISIFLPYSEGEPNIDRIAEKVNSLITFTGYRHIQFVRGIQYRYGYDEDNASWMNGTLSYLIEYGRAPIK*	hallmark_hmm	common_virus	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0022	cloud	direct	high	407	0.998	GCA_001058435.1_01832
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	27720	28457	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	18861	19598	GCA_001058435_1_35_31	GCA_001058435_1_35_31	+	222275	.	PF09192.10	Actin-fragmin kinase, catalytic	MDNIVFIKERMEMGITHPFICQTENNEWYIVKTLNMMPISQLLAEVIGSKLVAEIGLPCPPVKFIYIPLQATLYVKPDWKDDLLIGPAFGSNYISYAKVAKTAQAKNTVYLSEQEQKWLYMFDRWILNSDRTASLIGTGNINLLFDEEQKKILVIDHNLAFDENADFSEHIFAPPNRTWRLDWVDKQTFTEKAIDILRNFDDIYKSIPDDWFARDEQFQEIETQINRIRSILNRITEDCYWDNIE*	hhsuite_tools	nonviral_gene	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0023	shell	direct	high	737	0.999	GCA_001058435.1_01833
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	CDS	28454	29269	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	19595	20410	GCA_001058435_1_35_32	GCA_001058435_1_35_32	+	222275	.	pfam11236	Protein of unknown function (DUF3037). This bacterial family of proteins has no known function.	MKQPILYSFVRFRPYVETGEFVNVGLLMCEPEKKKLTYRLVPKNNKRVNDFFYKSKMFETVRETINDELQYIVNRLFTGSAQEMATFFHHYIDIKEGIVQYSNAAVGIVDNPQDYFERLYAQFIQKAGVKEESQEQTILRHYKALFKQENDRVLSQYKQYMVNGDYAKFSLPLALKNQQDKQILKAVKPLVFDQIESPSMIEHCDNWVAKINRAEEEGLIKRDNILFALDTPSTAHKANILDTIKRTFDRFNLQHISWNEDRQILDFAKSI*	mmseqs_cdd	nonviral_gene	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_CDS_0024	shell	direct	high	815	0.999	GCA_001058435.1_01834
GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote	cenote	CDS	529	1665	GCA_001058435.1	JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435.1_JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435_1_8	GCA_001058435_1_8	530	1666	GCA_001058435_1_8_1	GCA_001058435_1_8_1	-	8259	.	PDB:5WQ8_J	Type-II-secretion-system-protein	MKLQRNILCFFSCFLFGVAQAKNVDFKLEAVPLPKAVGMIYDEVLEKPYMLDPKLAADTRLISFHTKEDQDFNQFITRYFENMNIKTYEKNGVVYLAHIEPKPPKIIKHSFVYNPVHRDTEYLAQFLQGEGQVSASGDKLVYYGTAEDIARIKSVLKSVDTPSREVVVTGYVFEVQDIAKEGSGINLLAKLLSGKLGINIGYKQNYENFITVNAGNLDAMIELFRTDERFQVVSSPTLRVKSGSKGNFSVGSDVPVLSNVTYQDGRPIQSIEYRSSGVIFDIQPTIKSNAIDLKINQQLSNFVKTDTGVNQSPTLIKRDIVTDVTLKSGDIVVLGGLAENKLTEGETGFSFLPKGFLTGKSKSNTKTDIVILLQVKMI*	common_virus_hmm	common_virus	NaN	.	0	8259	GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote_CDS_0001	shell	direct	high	1136	0.999	GCA_001058435.1_00430
GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote	cenote	CDS	1662	2705	GCA_001058435.1	JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435.1_JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435_1_8	GCA_001058435_1_8	1663	2706	GCA_001058435_1_8_2	GCA_001058435_1_8_2	-	8259	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MAISAYVGLPGHGKSYEVVKSVIIPAIASGRRVVSNIYGLNKQLIEEYCLSKDKKLSPDNLGELVIVDNDLCLGVDFYPYKNAIDNNIETFCKAGDLIIIDEAWRFFPKKEKINDNHFSFLSEHRHFTDSNGISCDFVILNQDLTNLQRELVERIETTFKMTKLVAAGLKSRYRVDVFSGNKCWKTAKTASYQEKYDKAIFPLYKSYETDNGRELVTDKRQNALNKSSIKYFAVFAVLIVGFSLYKLISFFTPPEQDTPKVEQTLSENKEIEAITLNNQPQLQVTLPLSTQWRITGELQKSGKAFVILADNQGNLRLEPRSNFNFTGRMLEGIIDNQRVNYYSGVKQ*	hallmark_hmm	common_virus	NaN	.	0	8259	GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote_CDS_0002	shell	direct	high	1043	0.999	GCA_001058435.1_00431
GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote	cenote	CDS	2714	3007	GCA_001058435.1	JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435.1_JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435_1_8	GCA_001058435_1_8	2715	3008	GCA_001058435_1_8_3	GCA_001058435_1_8_3	-	8259	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MGSLILRLFSGFLGFAFKGIVAKFFVFFALFFITTEFIPVVIELFLPKEIPNLNALFSGLPDSIWYFLSILQIPTGITLVISAMLARFIIRRLPIIG*	hallmark_hmm	common_virus	NaN	.	0	8259	GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote_CDS_0003	shell	direct	high	293	0.997	GCA_001058435.1_00432
GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote	cenote	CDS	3017	4675	GCA_001058435.1	JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435.1_JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435_1_8	GCA_001058435_1_8	3018	4676	GCA_001058435_1_8_4	GCA_001058435_1_8_4	-	8259	.	.	hypothetical protein	MGFCLFSFGYGMRFSRGAWLKWIVIFSFIFNVVLSYKANANPLLARVVLAEVFEGIVARRAAVSVVGRAAANDAAYLAANEAAIGLRAAQTYRALGTVAANDATFAVGATSTLRNAKDISWVALALTSGAITLKDLNVESNSKIGVAFEPTAVPLADGRYAINVNGETKVVNAMPSPKDPIIYQYSKEKKQISENSQDIYKSDVLDKHYKYFNTLRTGEYAQSNSIEKLAEYIAQEEWGGKGEENYSEVDIEGKKYRYLRSQTTVENRYLRHQKIGNMIYPEVRQIFTEKQLNYDFEPILEGNTGSQIVYSFNPPKPSDYEVSTRVNNLTYIRFEENQHWVGDFPTTSSDKQLNSVADLDLNLYTKPLTATQLALLYNALLMSAASQPGYIGVPFSASDPITSAEVQAQLNKLGKTATFADLFAKAGVGNQLSIGTSNQPQPIPQPTPNPGTRPGEEKDDKDIDDEPKYPELESPTARQILEPFNQFFPQLKNFHLADRAVQCPTWEGHIDYLNIDVRLDKHCQYVEQNKAVITSLMLLIWGIVALRILLSA*	.	hypothetical_protein	NaN	.	0	8259	GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote_CDS_0004	shell	direct	high	1658	0.999	GCA_001058435.1_00433
GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote	cenote	CDS	4727	4957	GCA_001058435.1	JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435.1_JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435_1_8	GCA_001058435_1_8	4728	4958	GCA_001058435_1_8_5	GCA_001058435_1_8_5	-	8259	.	PFAM:PF10389.8	virion-structural-protein	MSNLKKYLIAAVVLGSSVGAFAGSESAQKVQIDVSGMLNQVDFSTVIAGIIAAGGVLIGPRIAKMGIRFILGLFGK*	phrogs_hmm	hypothetical_protein	NaN	.	0	8259	GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote_CDS_0005	shell	direct	high	230	0.996	GCA_001058435.1_00434
GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote	cenote	CDS	4992	5258	GCA_001058435.1	JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435.1_JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435_1_8	GCA_001058435_1_8	4993	5259	GCA_001058435_1_8_6	GCA_001058435_1_8_6	-	8259	.	.	hypothetical protein	MNEEIEITTKFCHPYMSFGGDGCSDVVLKVPRTEAVKLQSVAHSGNENQGFSVGDFFHHTDSFGFSFGLVLIFYLIAKSVGTFLALFK*	.	hypothetical_protein	NaN	.	0	8259	GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote_CDS_0006	shell	direct	high	266	0.996	GCA_001058435.1_00435
GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote	cenote	CDS	5258	5554	GCA_001058435.1	JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435.1_JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435_1_8	GCA_001058435_1_8	5259	5555	GCA_001058435_1_8_7	GCA_001058435_1_8_7	-	8259	.	PDB:1GVP_A	Rep-protein	MSNQNIEQYLLKVQIFSTSRIDERSGVSEKTGKDWFIRTQEAYIELGGQFPVQIKVPLKKDQVPYSPGNYYVHPTSFKVSGYFDLKVSDIVLVPAIDK*	rep_hall_hmm	common_virus	NaN	.	0	8259	GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote_CDS_0007	shell	direct	high	296	0.997	GCA_001058435.1_00436
GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote	cenote	CDS	5579	6847	GCA_001058435.1	JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435.1_JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435_1_8	GCA_001058435_1_8	5580	6848	GCA_001058435_1_8_8	GCA_001058435_1_8_8	-	8259	.	PFAM:PF05144.13	Phage-replication-protein	MIDFLKLSIPFKTEHILVCKDGETSFLKETLIEIAKRTGLKLRAGNVTFEIDGDLDVAELSHPYEAIPSHFGSLAMKVFNGSDRMKTPPYIELKASPAKLLQGHNVFGSTNLDVCCFVMLKTFCEALPELYEMTDTENTMIDWIDVTYSAHIPSEMMQKQVISFLQNVRAGQTKKTRYNREYETTAEWNSGSEHRVLKVYLKGAELQKRLSEIQSELKRTPNKQNLLNVLNVLSNPNLIEFSKQCVRFEARLKQRYLDKYRIPRKLCDLIQYQRQYEKQGKSLIKDLWQDAFNDIIQAVGESKMNVYNRDNIQKLLKKQYYTVTPKGNISYAKADRLFGFYKNLLTYGYLETQSEMDRKTFWRHEKDLLAVGLTKAQLQNLKAHERHNIIPLMKLVEIDFSCQRPDWYVEPTLDFVQMQLAA*	rep_hall_hmm	common_virus	NaN	.	0	8259	GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote_CDS_0008	shell	direct	high	1268	0.999	GCA_001058435.1_00437
GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote	cenote	CDS	6989	7195	GCA_001058435.1	JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435.1_JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435_1_8	GCA_001058435_1_8	6990	7196	GCA_001058435_1_8_9	GCA_001058435_1_8_9	+	8259	.	.	hypothetical protein	MRKDTSVRVNEMRRNKLEMLAIEISHKSGKLTKMSDIVNHLLDNYLQEAKQDLLHNAENSGKDKTKST*	.	hypothetical_protein	NaN	.	0	8259	GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote_CDS_0009	shell	direct	high	206	0.995	GCA_001058435.1_00438
GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote	cenote	CDS	7401	7592	GCA_001058435.1	JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435.1_JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435_1_8	GCA_001058435_1_8	7402	7593	GCA_001058435_1_8_10	GCA_001058435_1_8_10	+	8259	.	.	hypothetical protein	MPKSDHKHHNQSQEHEQNYQLRKHGLRQTKENRDLLDKITPPYSKNTDMDTLIQKNLKKFEKA*	.	hypothetical_protein	NaN	.	0	8259	GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote_CDS_0010	shell	direct	high	191	0.995	GCA_001058435.1_00439
GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote	cenote	CDS	7601	7840	GCA_001058435.1	JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435.1_JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435_1_8	GCA_001058435_1_8	7602	7841	GCA_001058435_1_8_11	GCA_001058435_1_8_11	+	8259	.	PFAM:PF07383.11	membrane-protein	MKKLLMISFVTLFVAACQQPSFERKVFKSSPTKKLDDTKFCVYEGKEYSKGSVIKAEGVNLKCGTYSSDVFDKTLSWGK*	phrogs_hmm	hypothetical_protein	NaN	.	0	8259	GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote_CDS_0011	shell	direct	high	239	0.996	GCA_001058435.1_00440
GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote	cenote	CDS	7852	8136	GCA_001058435.1	JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435.1_JUTJ01000008.1	GCA_001058435.1|JUTJ01000008.1	GCA_001058435_1_8	GCA_001058435_1_8	7853	8137	GCA_001058435_1_8_12	GCA_001058435_1_8_12	-	8259	.	.	hypothetical protein	MSNITIQHITPRHFYEAVKLLKQTEHNIRFSYDTVEIRFVFDRLETAEQTQARFEKMEHLGEFLKELTNSSVPVDLEEFIRKYRYQPKPKFFRR*	.	hypothetical_protein	NaN	.	0	8259	GCA_001058435.1|JUTJ01000008.1@region_1_8259@tool_cenote_CDS_0012	shell	direct	high	284	0.996	GCA_001058435.1_00441
GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote	cenote	tRNA	12079	12155	GCA_001058435.1	JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435.1_JUTJ01000036.1	GCA_001058435.1|JUTJ01000036.1	GCA_001058435_1_35	GCA_001058435_1_35@C1	3220	3296	tRNA-Val	tRNA-Val	+	222275	.	tRNAscan-SE score: 70.7	Val	NA	tRNAscan-SE	.	C1	20410.0	8860	29270	GCA_001058435.1|JUTJ01000036.1@region_8861_29270@tool_cenote_tRNA_0001	.	.	.	.	.	.