core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote	cenote	CDS	1	194	GCA_001063455.1	JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455.1_JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455_1_113	GCA_001063455_1_113@C0	1	195	GCA_001063455_1_113_1	GCA_001063455_1_113_1	+	23739	.	PFAM:PF04827.13	transposase	KSKHHLLNKQDKEANRRLGKLRTVIEHINRKLKIFKILSLPYRNRRKRFGLRANLIAGLINAMG*	phrogs_hmm	hypothetical_protein	C0	13805	0	13805	GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote_CDS_0001	cloud	ambiguous	low	13	0.067	GCA_001063455.1_02118
GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote	cenote	CDS	181	987	GCA_001063455.1	JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455.1_JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455_1_113	GCA_001063455_1_113@C0	182	988	GCA_001063455_1_113_2	GCA_001063455_1_113_2	+	23739	.	PF16872.5	Putative phage abortive infection protein	MQWDEYFRKRSIIENLVGAKISDLTNTTIDEKFNIDCYIKDNIRQNPLLKQYFIILFQILKFISLSLSKDIEGKTDNKITINDFSHDNQQSREKLSNHYINPQEKIYSNILRSFIPNDILKLLILNCLSLDKDPKEHNIKTFYNFQGLLNRYQFLEHLHLTIPTINNYYDNYDFIYFYLILIKTTNGIRESLGKSNLSNEITSFNISKDNFIKKINEEKESLKSDIQSEIGYDSHRAQFDPNSSSYTSNNILYEKLKILEKHIRLLHN*	hhsuite_tools	hypothetical_protein	C0	13805	0	13805	GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote_CDS_0002	cloud	direct	high	806	0.999	GCA_001063455.1_02118
GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote	cenote	CDS	1161	1610	GCA_001063455.1	JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455.1_JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455_1_113	GCA_001063455_1_113@C0	1162	1611	GCA_001063455_1_113_3	GCA_001063455_1_113_3	+	23739	.	COG4276	Ligand-binding SRPBCC domain  [General function prediction only]. 	MLTYTRSVWLDASLEPIFRYCTSRHGFACQFPFDVQWLSGKEYWARGNILDFRYRVCGIWLRHRAEIISLEPNQSFTDLMLKGIYRSFRHTHEFNFSGGRTCVTDTVEFTFGLGKMIDRLIGLPTLRRTFKKRHRLLKEWADYAEDATS*	mmseqs_cdd	nonviral_gene	C0	13805	0	13805	GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote_CDS_0003	persistent	direct	high	449	0.998	GCA_001063455.1_02119
GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote	cenote	CDS	1683	2417	GCA_001063455.1	JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455.1_JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455_1_113	GCA_001063455_1_113@C0	1684	2418	GCA_001063455_1_113_4	GCA_001063455_1_113_4	-	23739	.	PRK11161	fumarate/nitrate reduction transcriptional regulator Fnr. 	MTTHNAMHQMKTLCSSCSLRELCLPVGLLPNEFAQLDAVIRQSRRLKKGEYLFRTGEPFASLFAIRAGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSHVHSCDAVALEDSEVCELPFSHIEELGHNIPSLRSHFFRLMSREIVRDQGVMLLLGNMRAEERLAAFLLNLSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHHEGLISVEHKHIKILDSQTLKKMVSGCSHAI*	mmseqs_cdd	nonviral_gene	C0	13805	0	13805	GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote_CDS_0004	persistent	direct	high	734	0.999	GCA_001063455.1_02120
GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote	cenote	CDS	2563	3984	GCA_001063455.1	JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455.1_JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455_1_113	GCA_001063455_1_113@C0	2564	3985	GCA_001063455_1_113_5	GCA_001063455_1_113_5	+	23739	.	TIGR00538	oxygen-independent coproporphyrinogen III oxidase. This model represents HemN, the oxygen-independent coproporphyrinogen III oxidase that replaces HemF function under anaerobic conditions. Several species, including E. coli, Helicobacter pylori, and Aquifex aeolicus, have both a member of this family and a member of another, closely related family for which there is no evidence of coproporphyrinogen III oxidase activity. Members of this family have a perfectly conserved motif PYRT[SC]YP in a region N-terminal to the region of homology with the related uncharacterized protein. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]	MKVIPIQNNHNRNNDKPEFDRELIASLPSSGPRYTSYPTADRFHDGFREAEYINALNQRSMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMELLAPHLGGRHQLAQLHFGGGTPTFLSDDQIERVFRMIRKHFQLIPSGEYSIEIDPRKVSRETVLMLGKLGFNRMSVGIQDFDPKVQEAVNRIQSYDETKEVIDAAREAGFKSVSVDLIYGLPHQTAESIKTTIDTVLSLDPDRLALYHYAHLPHIFKPQRRIDTEAVPGSEEKLDMLQYCVQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIGSTYSQNERDINAYYAALDAGHLPIMRGYQLNQDDLLRRNIIQDLMCRFALDYQIYESVFGIPFDRYFKDELADLEQLASLGLVRLKPHGLTVTPKGRFLIRNIAMVFDYHLRHKETKAQYSQTV*	mmseqs_cdd	nonviral_gene	C0	13805	0	13805	GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote_CDS_0005	persistent	direct	high	1421	0.999	GCA_001063455.1_02121
GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote	cenote	CDS	4141	5097	GCA_001063455.1	JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455.1_JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455_1_113	GCA_001063455_1_113@C0	4142	5098	GCA_001063455_1_113_6	GCA_001063455_1_113_6	-	23739	.	PDB:5A21_D	head-to-tail-adaptor	MRNAAGLDISKDTIDAAVVIGDSVQTKKYSNDETGIKQLESWLQTFEDLPVCMEATGNYYEAAADYLAERHTVYVVNPLKISKYAESRFARTKTDKQDAKLIAEYCQTAKEKDLVHRPKPTDDQYRLSRLNAAYAQINQECTAMKNRCEAAKDSEVRDIFKNIIKHLQKQLKTLKTQIQKQTQKPQYQTRIKRLETIPAIGRLTAAVLLQYLTSADFKTPNKFAAFAGLNPQQKQSGTSVKGQEKITRYGNRKLRTALFMPAMVAYRMKAFSAFISRLEAKNKPKKVIITALMRKLAVIAYHVHKKCEDYDPTRYAAV*	hallmark_hmm	common_virus	C0	13805	0	13805	GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote_CDS_0006	cloud	direct	high	956	0.999	GCA_001063455.1_02122
GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote	cenote	CDS	5987	7147	GCA_001063455.1	JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455.1_JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455_1_113	GCA_001063455_1_113@C0	5988	7148	GCA_001063455_1_113_7	GCA_001063455_1_113_7	-	23739	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MIILQTGVPGSGKTSSVVNMLMTDESYTHFTDKDGVKKKRPLFVNGIPELKIEHEELSDEQIKSQPFQDFLPYGSLVIIDEAQRLMGTRSAASKVPPFIEALATHRHHGLDIVLITQHPSFLDSFVRRLVQRHMHVSIKPVGRKLYEWNECVDQPDSSVNIAKAIERTFVVPKKSFGMYKSAEVHTKPKRRIPKSLIFVVLFIPLLIGFTLYTINNMSKRFGADEQQKTSTTSASDVDGAEPKTSPATADIGQNLKPEDFVPTLAEKPESKPIYNNVRQVKTFEYPVGCVDGGKSGCTCYSSQGTPLKEITKAMCKDYAKNGLPFNPYKDEQQTAQQPQAAQQTAYEPENNQVITMGGQTPKNIMYDGYVEAGQQFAQRGGVVGER*	hallmark_hmm	common_virus	C0	13805	0	13805	GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote_CDS_0007	cloud	direct	high	1160	0.999	GCA_001063455.1_02124
GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote	cenote	CDS	7144	7437	GCA_001063455.1	JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455.1_JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455_1_113	GCA_001063455_1_113@C0	7145	7438	GCA_001063455_1_113_8	GCA_001063455_1_113_8	-	23739	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MQAAFFAILQRLLTYIVVKVFIALGISFVTFTGFTVGLGFVKDYISNQFNSMPSDILQIIMMAGFGHALGLIFGAFAFNVAMQSISKLSFIPGGGNK*	hallmark_hmm	common_virus	C0	13805	0	13805	GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote_CDS_0008	cloud	direct	high	293	0.997	GCA_001063455.1_02125
GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote	cenote	CDS	7441	9135	GCA_001063455.1	JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455.1_JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455_1_113	GCA_001063455_1_113@C0	7442	9136	GCA_001063455_1_113_9	GCA_001063455_1_113_9	-	23739	.	PFAM:PF05616.12	attachment-protein	MYHIQERSFLKIILCCSLFISVKAFAEGPVGHFERVEVYDDGRYKGIRGINKSTPYQHGRVWQGVFDSHTGQYASFDGQDLRVRHARTGLTSSSKISATVESRVSKSTVFRNLLSRARLGGKYAVQRAAGKLGAGLLGGPAGWAITAALTAYDLASPIAASEGYYYDDKYQDFVKTKTFVYCVATSGLCTDQRVGETVMNPRAVYADMESNPSDAEINKKLCSQLDVQHFGFEYPDRFSKKDTKFNREKNNCVVEFNVLKAVGSLSPGDTKTSQTRWLERVPKVKEPIPQSVFDKAVQPSADASPSKYVGATANQDGSVPGETQGNPTVTNGTVVTLGPATGPDNKPVQVTITFNTPSGGNTSADVKVTPRPDLTPGSPAAPNYTPAPVPPPATPPTTTPGDNGKPDGQPNKTPDDNPKDNPKPDPDDSPSGKDKPKPDDKPDPDGKDDPKPDDKPKEDDKPKESGGLLCEVFPNILACAEKGDIEEQEEPFKIPHTQNETTFSPDFFLPDNGVCPAPRTATYLGITMEFKYDLICRFAEMIRFLVIGIAAVVAAFIMFSSRKD*	common_virus_hmm	common_virus	C0	13805	0	13805	GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote_CDS_0009	cloud	direct	high	1694	0.999	GCA_001063455.1_02126
GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote	cenote	CDS	9490	9768	GCA_001063455.1	JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455.1_JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455_1_113	GCA_001063455_1_113@C0	9491	9769	GCA_001063455_1_113_10	GCA_001063455_1_113_10	-	23739	.	.	hypothetical protein	MGYQVGNNCYATRQDAENVYFSLVSPKIGEDGKLIQLQASKLGWILNGQVVKAELPECNPIDSMRDGSYIGWSVVAIMAAVWGMKLLWQKLR*	.	hypothetical_protein	C0	13805	0	13805	GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote_CDS_0010	cloud	direct	high	278	0.996	GCA_001063455.1_02127
GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote	cenote	CDS	9768	10223	GCA_001063455.1	JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455.1_JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455_1_113	GCA_001063455_1_113@C0	9769	10224	GCA_001063455_1_113_11	GCA_001063455_1_113_11	-	23739	.	.	hypothetical protein	MSIIETLSKEFRYSLADIKEIGGYVLSAYGGLLGIALIRSVIDGRKAKAAAERKERREEIRERLDEIRLRLAEIRLEKAEAEIKAHEAEESSDEDEECEDRRRTQEEALAVYEELVAEEQELEAQEQEFETIANGIGEDEDDDGVYIYKDC*	.	hypothetical_protein	C0	13805	0	13805	GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote_CDS_0011	cloud	direct	high	455	0.998	GCA_001063455.1_02128
GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote	cenote	CDS	10280	10498	GCA_001063455.1	JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455.1_JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455_1_113	GCA_001063455_1_113@C0	10281	10499	GCA_001063455_1_113_12	GCA_001063455_1_113_12	-	23739	.	PFAM:PF10389.8	coat-protein-B	MKLMNTCRKYGAKLAVVAAAPLALAGQAWAEVPESVKTDLAAAKTDALSVAAIVLGIIASIFAITLIRRVLR*	hallmark_hmm	common_virus	C0	13805	0	13805	GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote_CDS_0012	cloud	direct	high	218	0.995	GCA_001063455.1_02129
GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote	cenote	CDS	10592	10789	GCA_001063455.1	JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455.1_JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455_1_113	GCA_001063455_1_113@C0	10593	10790	GCA_001063455_1_113_13	GCA_001063455_1_113_13	-	23739	.	.	hypothetical protein	MQKVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAVNAGLEEIGNQYEFVVFGFLKD*	.	hypothetical_protein	C0	13805	0	13805	GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote_CDS_0013	cloud	direct	high	197	0.995	GCA_001063455.1_02130
GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote	cenote	CDS	10794	11084	GCA_001063455.1	JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455.1_JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455_1_113	GCA_001063455_1_113@C0	10795	11085	GCA_001063455_1_113_14	GCA_001063455_1_113_14	-	23739	.	PFAM:PF07459.10	RstB-protein	MNIQLQGQIVGVKKFNGQIEGKNFDYCRLIVATPLDSSQGNALGSSTTEYDFGGSANFEQFRNAQFPIEANLNVEIVTTGKTQKLKVIGFQPVKKG*	common_virus_hmm	common_virus	C0	13805	0	13805	GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote_CDS_0014	cloud	direct	high	290	0.997	GCA_001063455.1_02131
GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote	cenote	CDS	11130	12476	GCA_001063455.1	JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455.1_JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455_1_113	GCA_001063455_1_113@C0	11131	12477	GCA_001063455_1_113_15	GCA_001063455_1_113_15	-	23739	.	PFAM:PF02486.18	Replication-initiation-factor	MKDKMEDIKKAFAADMADAPADGKAAADASNLPPLSNRGGTETEDAPVFQEAFECYETYILDGKGNLLGVPLRRGISDSAFIDQITFSIHEDTFFHMYGISMDLFDDEDFIRAASKKAEEIFGFGIIEKAKHTGGRFYDSCWIMGSDNAQYGRVHFGGQNNTMLFEITGVGCNAAKSGWESRLYSFLTNAIRPKITRVDIAKDFFNCEYSPNQAREDRNKGLFTCHHVKPKGECIGSDWEEDDEAKMTKGKTYGIGSRESSKYVRIYQKGKQLGDKSSNWTRFEIEFKSKDIIIPFEVLQNPGEYFGGAYPICERFSKQAQRIEAVKNTLEITFERYVAWMKDQMGRGMNALKSMFPQKSKQDLWEMIEPEHDLLPKRLSLEAYDCRELKVTPVHDMPFVPKIDEYGMYFERFMQRQQRAHLLRSQVEDEAYNGMMYDKFARLPISWA*	rep_hall_hmm	common_virus	C0	13805	0	13805	GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote_CDS_0015	cloud	direct	high	1346	0.999	GCA_001063455.1_02132
GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote	cenote	CDS	12639	12839	GCA_001063455.1	JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455.1_JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455_1_113	GCA_001063455_1_113@C0	12640	12840	GCA_001063455_1_113_16	GCA_001063455_1_113_16	+	23739	.	.	hypothetical protein	MNEQTKQAAQTIGRLKRKASDEERLQGWRETCAEQGLSGEFILTAKLNGAAYTEEEAHMVAELFGK*	.	hypothetical_protein	C0	13805	0	13805	GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote_CDS_0016	persistent	direct	high	200	0.995	GCA_001063455.1_02133
GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote	cenote	CDS	13067	13804	GCA_001063455.1	JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455.1_JVFL01000142.1	GCA_001063455.1|JVFL01000142.1	GCA_001063455_1_113	GCA_001063455_1_113@C0	13068	13805	GCA_001063455_1_113_17	GCA_001063455_1_113_17	+	23739	.	COG1135	ABC-type methionine transport system, ATPase component [Amino acid transport and metabolism]. 	MIILDNVSKHYQTRDKTRFAAVEPTSLEIQDGEIFGLMGYSGAGKSTLLRLINLLERPDSGKVNVCGQELTALDPAALRQARQNIGMVFQQFNLLSNRTVADNVAFPLEIAGWSSEKIKERVKECLEIVGLTERADHYPAQLSGGQKQRVGIARALAPNPQVILADEPTSALDPATTRSVLECLEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKGKVVEIVEVRGNQIHAQSEIGRELIRED*	mmseqs_cdd	nonviral_gene	C0	13805	0	13805	GCA_001063455.1|JVFL01000142.1@region_1_13805@tool_cenote_CDS_0017	persistent	direct	high	737	0.999	GCA_001063455.1_02134
GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote	cenote	CDS	7625	8095	GCA_001063455.1	JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455.1_JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455_1_25	GCA_001063455_1_25@C1	1	471	GCA_001063455_1_25_10	GCA_001063455_1_25_10	+	38538	.	PRK00103	rRNA large subunit methyltransferase; Provisional	MNITVLAVGTKMPRWVDEAVGEYAKRFGRDVAYTLKEIKPEKRGAGVNAAQGMAAEEKRILEAIPQGAFLVVLDERGKAPTSVELAEHLKSWQQNGEHVCFVIGGADGMTDRLKQQARMMMRLSSLTLPHGMVRVLLTEQLYRAVSILHNHPYHRE*	mmseqs_cdd	nonviral_gene	C1	10133	7625	17758	GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote_CDS_0001	persistent	direct	high	470	0.998	GCA_001063455.1_00580
GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote	cenote	CDS	8774	9736	GCA_001063455.1	JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455.1_JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455_1_25	GCA_001063455_1_25@C1	1150	2112	GCA_001063455_1_25_11	GCA_001063455_1_25_11	-	38538	.	PFAM:PF01548.16	Transposase	MRNAVGLDISKTTFDATAIIGGIEKSAKFDNDSKGFEQFKHWLTELGCTDAHICMEATGNYYEGIADYIGSLYKVSVVNPLKISKYAESRFTRTKTDKQDAKLIAEYCQTAKAQDLVIRKPVINDGYKLKRLSALYAQLTADSTAQKNRLEAAKDTFVVKICQSNIKHLQRQIKAVKKELEKLTKQPALKDQTDRLATIPAIGRLTAVMLLNYLSGADFQTSNKFAAFAGLTPQIKDSGTSVRGKPSLTKYGNRRLRAMLFMPAMVAYRIKAFPDFIARLEAKKKPKKVIIAAIMRKLAVIAYHVHKKGEDYDPTRYKAA*	common_virus_hmm	common_virus	C1	10133	7625	17758	GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote_CDS_0002	cloud	direct	high	962	0.999	GCA_001063455.1_00582
GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote	cenote	CDS	10235	10378	GCA_001063455.1	JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455.1_JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455_1_25	GCA_001063455_1_25@C1	2611	2754	GCA_001063455_1_25_12	GCA_001063455_1_25_12	-	38538	.	.	hypothetical protein	MDGISFILGVWAATSYHKKGWKGFFKYFFLPLFLIIVLAELTILYSK*	.	hypothetical_protein	C1	10133	7625	17758	GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote_CDS_0003	.	unmatched_CDS	none	0	0	.
GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote	cenote	CDS	10378	11547	GCA_001063455.1	JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455.1_JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455_1_25	GCA_001063455_1_25@C1	2754	3923	GCA_001063455_1_25_13	GCA_001063455_1_25_13	-	38538	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MLYLYTGVPGAGKTLYAVSNLVKRKDFKDRPIFVDGIKDLDHDKINYFDIPEGESIQTWPKWAPPGAIIVVDECQRIFRPRPSGSKVPDYVAELETHRHRGLDFILITQNPRLIDVHLRGLIEHHTHLGKTNLGLRRKMEWTTGGAKDPESRANIREALISVYRLDKSVYGLYKSAEVHTKIRTKKSKLLMLFPLALCLVGYGIWSFTDFWGKFSGEGEKAKKASTTQTAQAQTQPSAVSASEPVTNGQYPKAETKPEEPKKPHLSEEDYQPRIAERPETAPIYDGMNKAVKVMPWPAACIKAENRCTCYTDQGTKIKDIGKQTCLNYVKDGLPFNPYKAQTAENAKPTQTAYTPDAPQVLTMGGHTPQNLMYDGYNDKALTNTGGKVN*	hallmark_hmm	common_virus	C1	10133	7625	17758	GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote_CDS_0004	cloud	direct	high	1169	0.999	GCA_001063455.1_00583
GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote	cenote	CDS	11551	11835	GCA_001063455.1	JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455.1_JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455_1_25	GCA_001063455_1_25@C1	3927	4211	GCA_001063455_1_25_14	GCA_001063455_1_25_14	-	38538	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MNWGSLITAVLMSVAGRILTAIGLSFVTVAGFRQLQSYFIQQVQNHIGGFPEDALQIVYIMGFGVMLNWIFGAFTFIATIKGFKKLSTIVKSEG*	hallmark_hmm	common_virus	C1	10133	7625	17758	GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote_CDS_0005	cloud	direct	high	284	0.996	GCA_001063455.1_00584
GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote	cenote	CDS	11832	13649	GCA_001063455.1	JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455.1_JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455_1_25	GCA_001063455_1_25@C1	4208	6025	GCA_001063455_1_25_15	GCA_001063455_1_25_15	-	38538	.	PFAM:PF05616.12	attachment-protein	MKNDTRSNVHHRHTALCLAMSATLFAAPVSAEVGLPPPAQHQGAGFPSEQALRQKGYDPKTGVWRVQSQNNGRPTVTKSGDTIKGSQPKTVTVTGNYGEKATIRTTQTQTVNSSKLQTAANTVAVGVGFSNGANQAGDYVNQMGNAVAKGNYGQAAYNAWQGVANFVDGFFGSPAKSSVGLLGQFGEGYLDGKVESTLGLKKAAQQAATAQAQAEQGGDLGGAIAAAAAKKAAEGAAAAKQAEQKAQGAREQAKQGKTIWQLTKFTTFRNGPATEQSLGEYTDKDPEYKRSRAEYDGTGEHNGVVFEVGSFSGYLPKKAPKGVVAITIDYKSVSYDQIGRQNPETVLKDMMLNQQDIKDILSRMLNNQQTNHAELMNQLSRIGDAVEKSTESNQFTPMTADSAPYTPQGSNTPQQTRFTLNADGSVSTSIIPRPDLKPNSTLAPTRSEIIPTPNKGQNTPTTPDSPNTPTTPDSPNAPTTPNQPNTPTTSDTPTGQQNQNQNQENQQQNFCQQNPNAAQCMPGGDASYEEIVLPENTIDLSFSPENVFQTEGVCPQPKSVDLGAFGQVEFSYQPLCDFAAKLRPVLIMMTILTCAWFVYGALEEL*	common_virus_hmm	common_virus	C1	10133	7625	17758	GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote_CDS_0006	cloud	direct	high	1817	0.999	GCA_001063455.1_00585
GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote	cenote	CDS	13639	13944	GCA_001063455.1	JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455.1_JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455_1_25	GCA_001063455_1_25@C1	6015	6320	GCA_001063455_1_25_16	GCA_001063455_1_25_16	-	38538	.	.	hypothetical protein	MGYQVGRVCHFTHEAATNDVMTHVVPTIDKDGVLHHPVFNGSTWQYNEQQVKLTFPDCDPMEYQKLGKEIGLMCVSIVATVFVVNLIYKFILSTREKSNEE*	.	hypothetical_protein	C1	10133	7625	17758	GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote_CDS_0007	cloud	direct	high	305	0.997	GCA_001063455.1_00586
GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote	cenote	CDS	13950	14171	GCA_001063455.1	JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455.1_JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455_1_25	GCA_001063455_1_25@C1	6326	6547	GCA_001063455_1_25_17	GCA_001063455_1_25_17	-	38538	.	CDD:PHA00979	putative-major-coat-protein	MNLKQKLQYAVAGASVAIMSLPAMAEDSALVTAAKAELASAKDGVSSIGAVVIGVAAAMVVVGLIIKAVRKGG*	hallmark_hmm	common_virus	C1	10133	7625	17758	GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote_CDS_0008	cloud	direct	high	221	0.995	GCA_001063455.1_00587
GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote	cenote	CDS	14266	14463	GCA_001063455.1	JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455.1_JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455_1_25	GCA_001063455_1_25@C1	6642	6839	GCA_001063455_1_25_18	GCA_001063455_1_25_18	-	38538	.	.	hypothetical protein	MQKVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAINAGLEEIGNQYEFVVFGFLKD*	.	hypothetical_protein	C1	10133	7625	17758	GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote_CDS_0009	cloud	direct	high	197	0.995	GCA_001063455.1_00588
GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote	cenote	CDS	14468	14758	GCA_001063455.1	JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455.1_JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455_1_25	GCA_001063455_1_25@C1	6844	7134	GCA_001063455_1_25_19	GCA_001063455_1_25_19	-	38538	.	PFAM:PF07459.10	RstB-protein	MNIQLQGHIVGVKKFNGQIEGKNFDYCRLIVATPLDSSQGNALGSSTTEYDFGGSANFEQFRNAQFPIEANLNVEIVTTGKTQKLKVIGFQPVKKG*	common_virus_hmm	common_virus	C1	10133	7625	17758	GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote_CDS_0010	cloud	direct	high	290	0.997	GCA_001063455.1_00589
GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote	cenote	CDS	14802	16148	GCA_001063455.1	JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455.1_JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455_1_25	GCA_001063455_1_25@C1	7178	8524	GCA_001063455_1_25_20	GCA_001063455_1_25_20	-	38538	.	PFAM:PF02486.18	Replication-initiation-factor	MKDKMEDIKKAFATDMVDAPADGRAVANASNLPPLSNRGGTETEDAGAFQEAFECYETYILDGKGNLLGVPLRRGVSDSAFIDQISFSFHEKTFFDKYGVRVSLLEDEDFIRAASMLAEEVFGFGIYKESKGSGGRFYERCWLMGSEDALYGRVHFGGQQNTILFELTGTGCGVAKEGWESRLFAFLTNAIRPKITRVDVAKDFFNGEYSPNQAREDRNKGLFTCHHVKPKGECLGSDWEEDDEAKMTKGKTYGIGSRESSKYVRVYEKGKQLGDKTSTWTRFEIEFKAKDIVIPFEVLQNPGEYFGGAYPICERFAQKATRIHAVKEDKVISADRYLEWVKKQFGRAANGLKFIFPELDKAKLFELIEPNHHKLPKSLAPEAYDCAFLKAQAIHEQQPFKPYKDPYDMYEYYENLEKQLEQQKHVTNEESYNNFVYDKFARQSISWA*	rep_hall_hmm	common_virus	C1	10133	7625	17758	GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote_CDS_0011	cloud	direct	high	1346	0.999	GCA_001063455.1_00590
GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote	cenote	CDS	16308	16583	GCA_001063455.1	JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455.1_JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455_1_25	GCA_001063455_1_25@C1	8684	8959	GCA_001063455_1_25_21	GCA_001063455_1_25_21	-	38538	.	.	hypothetical protein	MIKQFEISASVQKQIGDYLAANQTDLKTAMADETRNGEVAAIIHAGLPMMVRKIYSLEKMKNFFWTKKELMVEFVAMRLAAAEKKNAKKKR*	.	hypothetical_protein	C1	10133	7625	17758	GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote_CDS_0012	persistent	direct	high	275	0.996	GCA_001063455.1_00591
GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote	cenote	CDS	16805	17230	GCA_001063455.1	JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455.1_JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455_1_25	GCA_001063455_1_25@C1	9181	9606	GCA_001063455_1_25_22	GCA_001063455_1_25_22	+	38538	.	COG1981	Uncharacterized membrane protein  [Function unknown]. 	MYLWFKLLHVFFVISWFAGLFYLPRIFVNLAQVEAAEQPVEYERLSAMSRRLYKFMSPLGFGTLVFGILIPFVTGWWGQGWLHVKLLMGLLLLAYQFYCGALLRGFEEKRNTHSHKWYRVFNEVPVLMMVVALYMVVFKPF*	mmseqs_cdd	nonviral_gene	C1	10133	7625	17758	GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote_CDS_0013	persistent	direct	high	425	0.998	GCA_001063455.1_00592
GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote	cenote	CDS	17293	17757	GCA_001063455.1	JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455.1_JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455_1_25	GCA_001063455_1_25@C1	9669	10133	GCA_001063455_1_25_23	GCA_001063455_1_25_23	+	38538	.	cd07891	CYTH-like Clostridium thermocellum TTM-like subgroup 1. This subgroup contains the triphosphate tunnel metalloenzyme (TTM) from Clostridium thermocellum (CthTTM) and similar proteins. These are found primarily in bacteria. CthTTM is a metal dependent tripolyphosphatase, nucleoside triphosphatase, and nucleoside tetraphosphatase. It hydrolyzes the beta-gamma phosphoanhydride linkage of triphosphate-containing substrates including tripolyphosphate, nucleoside triphosphates and nucleoside tetraphosphates. These substrates are hydrolyzed, releasing Pi. Mg++ or Mn++ are required for the enzyme's activity. CthTTM appears to have no adenylate cyclase activity. This subgroup consists chiefly of bacterial sequences. These enzymes are members of the CYTH-like (also known as triphosphate tunnel metalloenzyme (TTM)-like) superfamily, which have a unique active site located within an eight-stranded beta barrel.	MTIEIERRFLLKNDDWKREASAPQVLQQGYLSVEKERTIRVRIIDDKAWLTLKGYISDVSRSEFEYEIPLAHARQMMETMCPFKMEKHRYRVEFKGFVFEIDEYFGDNAPLVVAELELPAEDTPFEKPDWLGAEITSEGKFTNAYLSKHPYSTW*	mmseqs_cdd	nonviral_gene	C1	10133	7625	17758	GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote_CDS_0014	persistent	direct	high	464	0.998	GCA_001063455.1_00593
GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote	cenote	tRNA	8235	8311	GCA_001063455.1	JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455.1_JVFL01000037.1	GCA_001063455.1|JVFL01000037.1	GCA_001063455_1_25	GCA_001063455_1_25@C1	611	687	tRNA-Met	tRNA-Met	+	38538	.	tRNAscan-SE score: 70.8	Met	NA	tRNAscan-SE	.	C1	10133	7625	17758	GCA_001063455.1|JVFL01000037.1@region_7626_17758@tool_cenote_tRNA_0001	.	.	.	.	.	.