core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001071965.1|JVOH01000034.1@region_1_2527@tool_cenote	cenote	CDS	2	148	GCA_001071965.1	JVOH01000034.1	GCA_001071965.1|JVOH01000034.1	GCA_001071965.1_JVOH01000034.1	GCA_001071965.1|JVOH01000034.1	GCA_001071965_1_20	GCA_001071965_1_20	3	149	GCA_001071965_1_20_1	GCA_001071965_1_20_1	-	2527	.	.	hypothetical protein	MIDEEVVIWNGLHAAERVGIILPFDLMLVKNGVDRRIVPSIKLNDDRIF	.	hypothetical_protein	NaN	.	0	2527	GCA_001071965.1|JVOH01000034.1@region_1_2527@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_001071965.1|JVOH01000034.1@region_1_2527@tool_cenote	cenote	CDS	1206	1775	GCA_001071965.1	JVOH01000034.1	GCA_001071965.1|JVOH01000034.1	GCA_001071965.1_JVOH01000034.1	GCA_001071965.1|JVOH01000034.1	GCA_001071965_1_20	GCA_001071965_1_20	1207	1776	GCA_001071965_1_20_2	GCA_001071965_1_20_2	-	2527	.	CDD:COG3728	Small-Terminase	MSTLNPRQEKFVAEYLKTLNVTQSAIKAGYSPHTASEQGSRLLKNKKVAKYIDEQRKRVIDEGVLSANELLHILSNAAVGDESEVREVVVKRGEFQRNPDTDRMNLVYNEHVEMVEVPIKPSDRLRARDMLGKYHKLFIDKKELSTDTPIFINIGEWPEDEEEQQQLIDSVGEEHPNRPILVDNIPTKD*	hallmark_hmm	common_virus	NaN	.	0	2527	GCA_001071965.1|JVOH01000034.1@region_1_2527@tool_cenote_CDS_0002	shell	direct	high	569	0.998	GCA_001071965.1_00379
GCA_001071965.1|JVOH01000034.1@region_1_2527@tool_cenote	cenote	CDS	1787	2119	GCA_001071965.1	JVOH01000034.1	GCA_001071965.1|JVOH01000034.1	GCA_001071965.1_JVOH01000034.1	GCA_001071965.1|JVOH01000034.1	GCA_001071965_1_20	GCA_001071965_1_20	1788	2120	GCA_001071965_1_20_3	GCA_001071965_1_20_3	-	2527	.	PFAM:PF07638.10	RNA-polymerase-sigma-factor	MSYDREAIKQFIRDYSKEHHDTTYNDENINIDDFFTLNEDVESMNIVDVGQQAFFNELDQYIYATCTSREHLLFIMLCEGQSLKRIADILMITKSRVYQIYSDLLDKLEK*	phrogs_hmm	hypothetical_protein	NaN	.	0	2527	GCA_001071965.1|JVOH01000034.1@region_1_2527@tool_cenote_CDS_0003	cloud	direct	high	332	0.997	GCA_001071965.1_00380
GCA_001071965.1|JVOH01000034.1@region_1_2527@tool_cenote	cenote	CDS	2116	2526	GCA_001071965.1	JVOH01000034.1	GCA_001071965.1|JVOH01000034.1	GCA_001071965.1_JVOH01000034.1	GCA_001071965.1|JVOH01000034.1	GCA_001071965_1_20	GCA_001071965_1_20	2117	2527	GCA_001071965_1_20_4	GCA_001071965_1_20_4	-	2527	.	PFAM:PF05263.10	spore-coat-protein	LIYHENKISEYTLLTEYNPKFINTKVKAITMQIEMMYHLNISHMTTSEVHGVITISYPLEKLAITIIEEKEKLKYFKTKSNSNMQQLKQVIKRYTPGEQKEIMYYMQSNGSTIDYDLIERLQRDLYKLRQKVSVKA*	phrogs_hmm	hypothetical_protein	NaN	.	0	2527	GCA_001071965.1|JVOH01000034.1@region_1_2527@tool_cenote_CDS_0004	shell	direct	moderate	375	0.912	GCA_001071965.1_00381
GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote	cenote	CDS	13750	13947	GCA_001071965.1	JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965.1_JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965_1_51	GCA_001071965_1_51@C1	1	198	GCA_001071965_1_51_13	GCA_001071965_1_51_13	+	129974	.	.	hypothetical protein	MIYIVIEKLLNNKEISNYKIKRDTDISYGGISELRNGKSKVKNLTLETAEKLYNYQKELEQSDER*	.	hypothetical_protein	C1	13257.0	13750	27007	GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote_CDS_0001	shell	direct	high	197	0.995	GCA_001071965.1_01104
GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote	cenote	CDS	14063	14458	GCA_001071965.1	JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965.1_JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965_1_51	GCA_001071965_1_51@C1	314	709	GCA_001071965_1_51_14	GCA_001071965_1_51_14	+	129974	.	COG1598	Predicted nuclease of the RNAse H fold, HicB family [Defense mechanisms]. 	MKYHFYALLQKEGSDYNVSFPDLPGALTYGKGIEEAIEMATDALEGHLLVMEDDGDIIPNPSTHKDLYKMIDEDDQLQLISVDTNLVRIKEENKTVNKMVTLPNYLVVIGKKQGINFSQTLQRALKEELNL*	mmseqs_cdd	nonviral_gene	C1	13257.0	13750	27007	GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote_CDS_0002	shell	direct	high	395	0.997	GCA_001071965.1_01105
GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote	cenote	CDS	15003	15665	GCA_001071965.1	JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965.1_JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965_1_51	GCA_001071965_1_51@C1	1254	1916	GCA_001071965_1_51_15	GCA_001071965_1_51_15	+	129974	.	PFAM:PF06152.10	minor-capsid-protein	MRQTNTTTYNFSRLLVTDSASLQTESQKLTYLKELGEDGEYKYVAKIDKKTSKICHSLNGKVFKVKDMIPGINAPPMHPWCRSTTVPHVGNWRDKFYKENTYKYQVEQIERIPKPSGALNDTNDPYQKKRNKHANAYYQSVRRRNKKIEIDIISRNTKLNKNLVKRAYEHLFINKYSLDGGINRFHPDYYITVSWQRLREGKNIKEQDLVLLRHEAFEHY*	hallmark_hmm	common_virus	C1	13257.0	13750	27007	GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote_CDS_0003	shell	direct	high	662	0.998	GCA_001071965.1_01107
GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote	cenote	CDS	15757	16008	GCA_001071965.1	JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965.1_JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965_1_51	GCA_001071965_1_51@C1	2008	2259	GCA_001071965_1_51_16	GCA_001071965_1_51_16	+	129974	.	.	hypothetical protein	MLILRKLYEDEQIIRYEYVPQDDIKNGKGEIAVNKLSSEVKEYSLSKLEIKKNILTYRNKSFLAILDFIEEDKFPIKYLYAWY*	.	hypothetical_protein	C1	13257.0	13750	27007	GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote_CDS_0004	shell	direct	high	251	0.996	GCA_001071965.1_01108
GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote	cenote	CDS	16172	16558	GCA_001071965.1	JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965.1_JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965_1_51	GCA_001071965_1_51@C1	2423	2809	GCA_001071965_1_51_17	GCA_001071965_1_51_17	+	129974	.	PDB:6B0X_d	capsid-scaffolding-protein	MENNQSNITEETKSNTNLENNDEQAQQNEKTFSQEEVSQMIKDRLARERRKSEERMKDAIQEAEKLAKMNKDQKNQYELEKLLKENEELKAEKALSQMKNETRTMLNEFGVQNFDDQIVNVLVKSCQQ*	hallmark_hmm	common_virus	C1	13257.0	13750	27007	GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote_CDS_0005	persistent	direct	high	386	0.997	GCA_001071965.1_01109
GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote	cenote	CDS	16651	16929	GCA_001071965.1	JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965.1_JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965_1_51	GCA_001071965_1_51@C1	2902	3180	GCA_001071965_1_51_18	GCA_001071965_1_51_18	+	129974	.	.	hypothetical protein	MSNITIHIDDQFMHKLVEDKLEKILQNYKRQYASVDIKDLVMITGLSKSTLQNKIVCEPEIVKITRRIGSRVIYLYPQVLEAYQQVITRISN*	.	hypothetical_protein	C1	13257.0	13750	27007	GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote_CDS_0006	persistent	direct	high	278	0.996	GCA_001071965.1_01110
GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote	cenote	CDS	17251	18276	GCA_001071965.1	JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965.1_JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965_1_51	GCA_001071965_1_51@C1	3502	4527	GCA_001071965_1_51_19	GCA_001071965_1_51_19	-	129974	.	COG2008	Threonine aldolase [Amino acid transport and metabolism]. 	MISFENDYLEGAHEQVLKRLVETNRIQAAGYGFDDFSAQAADKIRETIQCPDATIRFLVGGTQTNQVVINSMLKSYEGVISADTGHVAVHEGGAIEFSGHKVLAIPSSEGKISAEGVEAYLDTFYSDFKREHMVFPGMVYISHPTEYGTLYTKDELKSLAKVCKKHEIPLFMDGARLGYGLMSENTDVTIKDVANYCDIFYIGGTKIGALCGEAIVFTKNNEPKNFTTIIKHHGALLAKGRLTGIQFLELFTDDLYFKISKHAIDMAKKVKKGFLDKGYQLYFDSPTNQQFFVISNDKIKELEQKVKFAIWEKYDDNHRVVRFATSWATTEENVEELLKLI*	mmseqs_cdd	nonviral_gene	C1	13257.0	13750	27007	GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote_CDS_0007	persistent	direct	high	1025	0.999	GCA_001071965.1_01111
GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote	cenote	CDS	18589	18795	GCA_001071965.1	JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965.1_JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965_1_51	GCA_001071965_1_51@C1	4840	5046	GCA_001071965_1_51_20	GCA_001071965_1_51_20	+	129974	.	PF10957.8	Sporulation protein Cse60	MNLMQQIKFKTFTEDSLERLEKSVNDFLRSDDGSSYKLLNISIKQVEERKFPNIEEDYNAVLTLVTQE*	hhsuite_tools	hypothetical_protein	C1	13257.0	13750	27007	GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote_CDS_0008	persistent	direct	high	206	0.995	GCA_001071965.1_01112
GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote	cenote	CDS	18856	20328	GCA_001071965.1	JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965.1_JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965_1_51	GCA_001071965_1_51@C1	5107	6579	GCA_001071965_1_51_21	GCA_001071965_1_51_21	+	129974	.	PDB:2ZE9_A	Phospholipase-D	MDFGYLGTILTIILVLGFIINLVLAFVIIFLEKDRRSASSTWAWLFVLFILPIIGFILYLFLGRTVSKKKMEKNNGKELDAFQDLVKAQADSFEKLNFESTNDQVEKHHDLIRMLLMKQDAFLTENNKIDLFTDGHKLYDKVIEDIYNAKDYIHLEYYTFELDGLGKKIIDALETKLKEGLEVKLLYDDVGSKKVNMAKFKQFKSLGGEVEAFFASKFPLVNFRMNNRNHRKIIIIDGQIGYIGGFNIGDDYLGLGKLGYWRDTHLRVQGDSVDALQLRFILDWNSQAHRPQFEYDQKYFPKKTGEKGDKALQIASSGPAFDLHQIEYGYTKMIMSARKSIYLQSPYFIPDQSYINALKMAANSGVEVNLMIPCKPDHPFVYWATFSNAADLLDSGVNVYTYQNGFIHSKILMIDDEVSSIGSANMDFRSFELNFEINAFVYDREIAQQLRQAFEEDIKKSKLLTKEKYDQRPLSIKFKEDLAKLVSPIL*	common_virus_hmm	common_virus	C1	13257.0	13750	27007	GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote_CDS_0009	persistent	direct	high	1472	0.999	GCA_001071965.1_01113
GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote	cenote	CDS	20504	21388	GCA_001071965.1	JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965.1_JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965_1_51	GCA_001071965_1_51@C1	6755	7639	GCA_001071965_1_51_22	GCA_001071965_1_51_22	+	129974	.	COG1131	ABC-type multidrug transport system, ATPase component [Defense mechanisms]. 	MVIKLQNLAKSFNNNKVLNDISLKLKENTCTALIGKNGAGKTTLIDILIGNIQSDVGHIVDESKMIDTNHMGVLYQKTNFPKLFKVKELFHLHQSFYKNPISLPQFINITQFNNKQMNQMTSQLSGGQKRILDFALTLVGQPEFLILDEPTSGMDIETREHFWSIIEKLKQAHVTILYTSHYIEEVERMADQVVLLDQGQIQLDDSPEHIKNTQNNSIIVLPILDEGLFNDLKNAFNIKKLKNHYEIKTNQVEAVIQKLIEYKFDLNKIEIHKLSLLEIVFSGIENQKGVMTEC*	mmseqs_cdd	nonviral_gene	C1	13257.0	13750	27007	GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote_CDS_0010	persistent	direct	high	884	0.999	GCA_001071965.1_01114
GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote	cenote	CDS	21382	22113	GCA_001071965.1	JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965.1_JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965_1_51	GCA_001071965_1_51@C1	7633	8364	GCA_001071965_1_51_23	GCA_001071965_1_51_23	+	129974	.	COG0842	ABC-type multidrug transport system, permease component [Defense mechanisms]. 	MLDTFLKTEIKIMFRKKLYLFMSIFLPVAFYLLFTSLLDLPEEAKKPFYKEYMYSMTVFSLMNFCMMSFPLDMIEERNNGWYKHLMSTPLKPVHYYLAKVLKTMCQFLVAIIIIFMVAHFYKNVNMEFINWILSSVVLWIGASLFLTFGLVIAQFNDIQKASSVANLLNIAMAIVGGLWFPVNTFPNWLQVISKKMPTYHLKQIALDLGKDKGINFTSFGFLILYSIIFLSIALLINKKKDVS*	mmseqs_cdd	nonviral_gene	C1	13257.0	13750	27007	GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote_CDS_0011	persistent	direct	high	731	0.999	GCA_001071965.1_01115
GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote	cenote	CDS	22144	23214	GCA_001071965.1	JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965.1_JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965_1_51	GCA_001071965_1_51@C1	8395	9465	GCA_001071965_1_51_24	GCA_001071965_1_51_24	+	129974	.	COG4585	Signal transduction histidine kinase  [Signal transduction mechanisms]. 	MGEISSLVYLIFPIFGLFDSEHIFNKSIYFIALSIFTVSYLMLVLLHTKLNKNHLYILLLIHYVCIMYFVYAYEPLLSMFFFYSAFALPFIFDVGLKSKEFISYIITMIICVLFIYIMHHDQVYMMIIYYVVILMIMFGNFQVRKDRKVRKELEEKNRYINVLIAEQERNRIGQDLHDTLGHVFASLTLKSELAAKLIDTDKESAKKEMMAINQLSRETLNKVRSIVDDLKVQSFEEEVSSVETILRDANLKFIFKNKGVAKSLNPAKQSILSMILKEAINNVIKHAHATEVIGQLVEEHQQIKLIVQDNGVGIKDKEACHLRSIKERAEYLNGKVAVKSENGTTVVVTIPRGELM*	mmseqs_cdd	nonviral_gene	C1	13257.0	13750	27007	GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote_CDS_0012	persistent	direct	high	1070	0.999	GCA_001071965.1_01116
GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote	cenote	CDS	23211	23813	GCA_001071965.1	JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965.1_JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965_1_51	GCA_001071965_1_51@C1	9462	10064	GCA_001071965_1_51_25	GCA_001071965_1_51_25	+	129974	.	cd19930	phosphoacceptor receiver (REC) domain of DesR and similar proteins. This group is composed of Bacillus subtilis DesR, Streptococcus pneumoniae response regulator spr1814, and similar proteins, all containing an N-terminal REC domain and a C-terminal LuxR family helix-turn-helix (HTH) DNA-binding output domain. DesR is a response regulator that, together with its cognate sensor kinase DesK, comprises a two-component regulatory system that controls membrane fluidity. Phosphorylation of the REC domain of DesR is allosterically coupled to two distinct exposed surfaces of the protein, controlling noncanonical dimerization/tetramerization, cooperative activation, and DesK binding. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	MISLIIAEDQLMLRKAMVQLIELNEEMKVLKDVENGKEALQFIENEKPDVAILDIEIPGMTGLEILAQIRAKGLNTKVIIVTTFKRPGYFEKAVANGVDAYVLKERSVEDLVSTIYNVMNGEKEYSTSLMTSLFKESNPLTHKEQVVLREIGNGLSSKEIAEKLYLSDGTVRNYTSTIIDKLYSDNRFDAWKKATAKGWI*	mmseqs_cdd	nonviral_gene	C1	13257.0	13750	27007	GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote_CDS_0013	persistent	direct	high	602	0.998	GCA_001071965.1_01117
GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote	cenote	CDS	23845	24024	GCA_001071965.1	JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965.1_JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965_1_51	GCA_001071965_1_51@C1	10096	10275	GCA_001071965_1_51_26	GCA_001071965_1_51_26	-	129974	.	PF17412.2	Family of unknown function	MEILDCVIDTNSAIYIVKTTGGNVFHHTLSTDTPTKKVIEILTLLSDHIDKSNQTKLKI*	hhsuite_tools	hypothetical_protein	C1	13257.0	13750	27007	GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote_CDS_0014	persistent	direct	high	179	0.994	GCA_001071965.1_01118
GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote	cenote	CDS	24224	24412	GCA_001071965.1	JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965.1_JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965_1_51	GCA_001071965_1_51@C1	10475	10663	GCA_001071965_1_51_27	GCA_001071965_1_51_27	-	129974	.	.	hypothetical protein	MDSSNESKISLIAIIVAIIVGVILQIVFKLPIIVSVVVAILLGILVGFIVYLIQSTLNKRKK*	.	hypothetical_protein	C1	13257.0	13750	27007	GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote_CDS_0015	persistent	direct	high	188	0.995	GCA_001071965.1_01119
GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote	cenote	CDS	24577	25113	GCA_001071965.1	JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965.1_JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965_1_51	GCA_001071965_1_51@C1	10828	11364	GCA_001071965_1_51_28	GCA_001071965_1_51_28	+	129974	.	PDB:1RKN_A	Thermonuclease	MKSKKSLSLIVLALIAIIVIMFQLINHSGPFSKIGTNQQNQSTDLKGKDKVYVERVVDGDTFVANKDGKEIKVRMIGMDTPETVKPNTPVQPYGKEASNYTKKALTHQNVYLEYDKEKNDRYGRTLAYVWISDKRMFNEELVEKGLAREKYYSPNGKYRDVLIKAQNKAKQNKVNLWS*	common_virus_hmm	common_virus	C1	13257.0	13750	27007	GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote_CDS_0016	persistent	direct	high	536	0.998	GCA_001071965.1_01120
GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote	cenote	CDS	25205	26077	GCA_001071965.1	JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965.1_JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965_1_51	GCA_001071965_1_51@C1	11456	12328	GCA_001071965_1_51_29	GCA_001071965_1_51_29	-	129974	.	.	hypothetical protein	MSVTVILSVIIIILVIALFLNQRYMKDRVETEEYARNQLIAKNSILSEENLSLKNQMLSSNNDVGHHAFKNAKRELQKILDRFIEQGRLKSYTIIPTSNLAIKHPLFEYARSFDFIIITEVGLINVDVKNWNQKTFYHFDVPDKHAEEGSNQYSTDKVVGHYISSRYHSQFNTTRSGVYTFTEILQDNRVIYEFYDHDPYQQAANNAKALKDQIEKDYQFKIQSIGVIYFSDGSVNIIEGSDESDKYVDTVSTRSSLEKVIDEAVQLSKHPLNDNQIEEISNSFKQHMNN*	.	hypothetical_protein	C1	13257.0	13750	27007	GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote_CDS_0017	persistent	direct	high	872	0.999	GCA_001071965.1_01121
GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote	cenote	CDS	26413	27006	GCA_001071965.1	JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965.1_JVOH01000072.1	GCA_001071965.1|JVOH01000072.1	GCA_001071965_1_51	GCA_001071965_1_51@C1	12664	13257	GCA_001071965_1_51_30	GCA_001071965_1_51_30	+	129974	.	.	hypothetical protein	MKLEERNAVDDLVQILMQTSSHSFKFHGVVAMQLFLNDEFKLPSKVDICVERKKLIEIIKVIPKDFSIQYYGKGHSPHQTERPSLSEVAHVEILKDNNIVLNIFVYDVVNDEWIFRLDSSIRLPKNNIYFHSLNWNVDYIKPEIVLMYDLMDNQEYHQFSNYKAVIDALSYYQFYILKLVVGEKRIEEAVINNRKTS*	.	hypothetical_protein	C1	13257.0	13750	27007	GCA_001071965.1|JVOH01000072.1@region_13751_27007@tool_cenote_CDS_0018	persistent	direct	high	593	0.998	GCA_001071965.1_01122
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	35967	36476	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	1	510	GCA_001071965_1_61_35	GCA_001071965_1_61_35	+	97965	.	cd00841	Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins.  This domain family belongs to the metallophosphatase (MPP) superfamily.  MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases).  The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	MSKWIIVSDNHNEAGILYEVFEAHKDADVFLHLGDSQFQYDDTELSLYHRVKGNCDFYPEFPEEEIIENSGIKAFYTHGHFYDVNRTRMKLAEKAKSLACQFAFYGHTHIAKYENIGGIHVINPGSISQSRSNIEETFAELLIDDTNKQAKLNFRNRENKVIDTVKIVI*	mmseqs_cdd	nonviral_gene	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0001	persistent	direct	high	509	0.998	GCA_001071965.1_01468
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	36735	37781	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	769	1815	GCA_001071965_1_61_36	GCA_001071965_1_61_36	-	97965	.	PDB:1Z19_B	Integrase	MATFTVNKRKNKTSSSWQYDVKHPSLKSGKKRKSGFKTKAEATNAAQQLIRDLEDGKKVNNNKKFKTYYLEWLVANGKDKLSIKQQYWYEHSLDLFLDHFGEDIMIKHITRNEYQKFLTNFANGRTSETVRKVNLFLSNCLKDAVYDGYLTKDPTYNVKAKGTKSAKKEDVKFLTIEQYEGLREYFKLKSDKSSIMLFILLITGGRFSEVNRMTYDDLIYQDNAIHLPGTKTVTSDRIVEVSKSDLLYIKSALLHHPRRRDNIIFNLSHNAISKVFRKAKGKFEIDNEVTPYSLRHTHASYLLSKGIPIEYISKRLGHSNIGITLDVYTHLLDEHKKEQGARVRELFS*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0002	shell	direct	high	1046	0.999	GCA_001071965.1_01469
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	37845	38912	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	1879	2946	GCA_001071965_1_61_37	GCA_001071965_1_61_37	-	97965	.	COG4823	Abortive infection bacteriophage resistance protein  [Defense mechanisms]. 	MRDIESIKTLLETSIYNKPHLSCEEQLVLLEHRGVKIENKKFALEQLETISYYSLINAYSPLFKQENGQYEGNVTFNDFYMCYKYDTRLKNIIFKYIILIEQTLKTNLSATVAKNYGVQEPTIKRTFTNKKGKQITGYDIRNSYLDAKNYDRNNSYRSGHLRHLSKYRDYLKNDSIKHYRNKHNHIPPWILIIPLNFGETIKWFSILKPKDKQSVASKVCGLKTDNSLKDVAMPILEILRQYRNVIAHGQRFYSFKSNEDTAHLSLSFVNSLLEYDFIDKTKYKKGIGKNDLYSLIISIMIFTKPSGIRKKFIEELNVLYKEIEKYCKYNLFEVIGVTQYDLEKLYTLNRLLKAL*	mmseqs_cdd	nonviral_gene	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0003	shell	direct	high	1067	0.999	GCA_001071965.1_01470
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	39161	39736	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	3195	3770	GCA_001071965_1_61_38	GCA_001071965_1_61_38	-	97965	.	PFAM:PF16339.4	lipoprotein	MKFKLLGTAILSSALLLTACGQDGDKSNKDDNKKSESKSAKKSNDPKKNKDKKSEDNKKKDSNKDKGQPSEDTQQNEQSNEQQTQQNNTQNNSNQINQQQNNQQAQQSNSKEPTKEEIAEWDRQNVKGGTDYGLIDPKEANESSQSQNEEPDEWVKGQEEWANANQSQKEEIRKQDAEKYGYEYDPKNYEE*	phrogs_hmm	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0004	shell	direct	high	575	0.998	GCA_001071965.1_01471
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	39763	40434	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	3797	4468	GCA_001071965_1_61_39	GCA_001071965_1_61_39	-	97965	.	PDB:3DTE_A	IrrE-protein	MHFVYQNSFLKAARAVSALIETNYIDRFPLPIKEIIENDSNVELFTFEDFCNMTGYTLNELQTYGGSDEAFHIKKGNKFAIIYNDDVYHRRLRFTLAHEYGHYIMEHDGMSYKNTPIFQDAQRTNIEEYEANSFASCLLFPLNVRYKYRNVLNEYDVADLFEISYQAAKVALDIFDEHMDSGLEDHISMFEHRHMETYMSFLEEMLGEQLAEYNHIMRTEYGY*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0005	shell	direct	high	671	0.999	GCA_001071965.1_01472
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	40448	40786	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	4482	4820	GCA_001071965_1_61_40	GCA_001071965_1_61_40	-	97965	.	PDB:1PRA_A	Repressor-protein	MNLVQRIRNLCNSQSLTFAELERILGFSNGQIRRWEKTKPGIDKIQKVADYFDVSVDYLLGREKDEYAGEQEDEEIRIMHRGVKNMTKEDREKALKMFETFFDNWDEYTKDK*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0006	shell	direct	high	338	0.997	GCA_001071965.1_01473
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	41017	41244	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	5051	5278	GCA_001071965_1_61_41	GCA_001071965_1_61_41	+	97965	.	PFAM:PF10078.8	transcriptional-repressor	MLSKKVNGGVIMATTEFGMKVRMELLKRNITNKQLADMLGISSAYLSDILRGRRDAFEQKKRIAKILEIKEEVKS*	phrogs_hmm	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0007	shell	direct	moderate	194	0.851	GCA_001071965.1_01474
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	41244	42035	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	5278	6069	GCA_001071965_1_61_42	GCA_001071965_1_61_42	+	97965	.	COG3561	Phage anti-repressor protein  [Mobilome: prophages, transposons]. 	MNEIQQLFNLKRNEDGTVAVSGRELHKGLEIGTQYDKWMERMIAYGFEENIDYIIQSVKVQSQKRLRTYEQLDHIMTLDMAKEISMIQRSEIGRKIRGYFIKVERQHNELASAYGITSLDDMNQLIEQLVSDKLDYLISTGQVSNQKLEELNNKFEGEYVTPQDIDAIKFAIKSKAEQILGKAGIQVTLDEFLIGDVYEQALANKKAKEEYRHQLGKVKSKLLVKSKKHLGMKGNAPNNHIKRKDVDLAIQFIKDVRPSAIEI*	mmseqs_cdd	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0008	shell	direct	high	791	0.999	GCA_001071965.1_01475
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	42074	42307	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	6108	6341	GCA_001071965_1_61_43	GCA_001071965_1_61_43	+	97965	.	.	hypothetical protein	MEEKKMSRSQVFNVYKLKEQAFEEFYPQEHQELANEILQSIKKKEPTYEEAYAVLNLVHAKLEFESNFVHVLSNVKI*	.	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0009	shell	direct	high	234	1.0	GCA_001071965.1_01476
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	42270	42746	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	6304	6780	GCA_001071965_1_61_44	GCA_001071965_1_61_44	-	97965	.	.	hypothetical protein	MDIKELKNIDVLLKMINSDLQTKHSYKIVCRYKESLVTIDFVLPFQWNDEFYCYEPKTINSRQDDKERVYIELNSQYQATKDISKFKFKQLLDHYKNQQTNHLMLYLLENYDFYNFDMNFSDYAYNIQSLDGKWKLPIIKLDNNLEFISLHLIEHEQN*	.	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0010	shell	direct	high	476	0.998	GCA_001071965.1_01477
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	42835	43044	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	6869	7078	GCA_001071965_1_61_45	GCA_001071965_1_61_45	+	97965	.	.	hypothetical protein	MEYIGFADANEFVKVSGISKNDLEKHVYSNREFQQSCMYRFGKNHKRYIEIKTGIEFIKQNILISETAL*	.	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0011	shell	direct	high	209	0.995	GCA_001071965.1_01478
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	43293	43574	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	7327	7608	GCA_001071965_1_61_46	GCA_001071965_1_61_46	+	97965	.	.	hypothetical protein	MQEFITIRLPKEKYSQLIAKSVQLDFLRSDYDFLNRQYEDMCDRYAELRKDYTEQIQSCIRLDKTIKTMEESISILREGVLNNEQFIHLKRQL*	.	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0012	shell	direct	high	281	0.996	GCA_001071965.1_01480
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	43540	44025	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	7574	8059	GCA_001071965_1_61_47	GCA_001071965_1_61_47	+	97965	.	PFAM:PF05565.10	resistance-protein	MSSLFILKDNYKQIYELIAEQEDEQILKDTLDSINDALEDKADGYVAVIKSLETDNIAIDEEIKRLKQRKTSNENGIKRLKETLQQVMEETGKEKFKTALNSYSIANNPPSLDVTDESLIPKQYYVEQKPKLDKKELLKAIKGGLELKGVELKQSRSLRVR*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0013	shell	direct	high	485	0.998	GCA_001071965.1_01481
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	44026	44802	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	8060	8836	GCA_001071965_1_61_48	GCA_001071965_1_61_48	+	97965	.	PFAM:PF05707.11	DNA-packaging-NTPase	MTEEKQEQDILTQLGVKDISKQNTNKFYKFAIYGKFGTGKTTFLTKDNNALVLDINEDGTTVTEDGAVVQIKNYKHFAYVIKMLPQIIEKLRDNGKKIDVIVIETIQKLRDITIDDIMNGKTKKPTFNDWGECATRIVHMYRYVSKLQEQYQFHLAISGHEGINKDKDDEGSTINPTITIEAQDQIRKAVVSQSDVLARMTIEEHEENGQKSYEYVLNAEPSNLFETKIRHASNITINNKKFANPSITDVVEAIRNGN*	hallmark_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0014	shell	direct	high	776	0.999	GCA_001071965.1_01482
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	44829	45383	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	8863	9417	GCA_001071965_1_61_49	GCA_001071965_1_61_49	+	97965	.	PDB:3EIV_D	Single-stranded-DNA-binding-protein	MKITGQAQYTKETNQEAFMKGGDFLGAGEFTVKVKDVEFNDKEGRYFTIVFENNEGKQYKHNQFVPPFQQDFQERQYIELLSRLGIQLNLPDLTFDTDRLINKMGTIVLKNKFNEEQGRYFVRLSFVKTWNKGDEIVNKPEPKTDEMKQREQQASGQQTPMSQQSNPFGNANGPIDISSEDLPF*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0015	shell	direct	high	554	0.998	GCA_001071965.1_01483
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	45396	45944	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	9430	9978	GCA_001071965_1_61_50	GCA_001071965_1_61_50	+	97965	.	PFAM:PF05551.10	homing-endonuclease	MKEIWKDVVGYEGIYEVSNKGRIRTHKYKTTYTEKHGVRHWKQRYLKDKTPNGRDVRVTLWKSGKCKDFLVHRLVAFAFIPAVVGKECINHIDGNPKNNNVKNLEWCTYKENTNHAFENGLNTSNMAVKLTNHLGIEYEFISMSRASKFLGRNHGYVSGRLKDNCSKLTDTDGNKYKVEKLI*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0016	shell	direct	high	548	0.998	GCA_001071965.1_01484
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	45945	46613	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	9979	10647	GCA_001071965_1_61_51	GCA_001071965_1_61_51	+	97965	.	PFAM:PF16784.4	Putative-HNHc-nuclease	MQRITRYQRDNDGTYSVVATGVELEQSHIDLLENGYSLIAEVEVPDNKKLSIEQRKKIFALCRDIELHWGEPVDSLRKRFQAELEIMNGYNEISLSNCSMRIASELIELIIAFMFHHQIPMRVETSKLLSGDKAMLYWATVNRNCVLCGKSNADLAHHYAIGRGANRKSMDHYGYEVLALCREHHSQQHNIGVETFDKLYHLENSWIKVDDKLNNMLKGVKE*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0017	shell	direct	high	668	0.999	GCA_001071965.1_01485
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	46610	46840	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	10644	10874	GCA_001071965_1_61_52	GCA_001071965_1_61_52	+	97965	.	PRK09706	transcriptional repressor DicA; Reviewed	MKSRMITIDDRIQIAFRISQLRNNNNLTQKGFGKRVGVSELSVNRWENRWQLPPMKTVRRMAEEFKTTPEWILYGE*	mmseqs_cdd	nonviral_gene	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0018	shell	direct	high	230	0.996	GCA_001071965.1_01486
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	46846	47052	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	10880	11086	GCA_001071965_1_61_53	GCA_001071965_1_61_53	+	97965	.	PRK09706	transcriptional repressor DicA; Reviewed	MTSGQRIKEHRLNLGETMEEFGRRFNAHKSIVSKWEKDLTKPNVKRLRIIADDMNITVSELLGSEKDE*	mmseqs_cdd	nonviral_gene	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0019	shell	direct	high	206	0.995	GCA_001071965.1_01487
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	47045	47806	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	11079	11840	GCA_001071965_1_61_54	GCA_001071965_1_61_54	+	97965	.	PFAM:PF05766.11	NinG-recombination-protein	MSKRKNVSNKTRFEVFKRDNFTCQYCGKSAPEVVLNVDHIEPVSKGGSNDISNLITSCFECNNGKGNKKLSDKSELEKQHNELILLNERKKQLEQMMEWKKELINLDNHKVDMLTEYIEETLSTRITEVGKKKLKRWLMKYDFKDLVYATDKAFAAYEESDSNIVFDKIERIAYYEKHPVAEYIKKSSYIRGIFKNRNIFYRDFELKEIMRMWSENFDSFDIPIDVAKQAKTYKVFEEELLYQIDEVIRNGEA*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0020	shell	direct	high	761	0.999	GCA_001071965.1_01488
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	47793	48191	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	11827	12225	GCA_001071965_1_61_55	GCA_001071965_1_61_55	+	97965	.	PFAM:PF09681.9	phage-replisome-organiser	MGKHRFVNVEFWQDAFVLDLTPEEKYFYLYIMTNSKTSQCGIYELPYRVIELETGYNRETVEKLLNRFVEYGKIKYSKNTKELFILNWAKFNWNNSEKVVNRIKQELDNVKEISFIEQYLDYVNSLEKIPLT*	rep_hall_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0021	shell	direct	high	398	0.997	GCA_001071965.1_01489
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	48425	48583	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	12459	12617	GCA_001071965_1_61_56	GCA_001071965_1_61_56	+	97965	.	PFAM:PF06069.10	replication-initiation-protein	MTSQWLNDEKMNQYLRPETLFGTKFEGYLNQELQPSGMDQLERMKYDPSYWD*	phrogs_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0022	shell	direct	high	158	0.994	GCA_001071965.1_01490
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	48594	49364	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	12628	13398	GCA_001071965_1_61_57	GCA_001071965_1_61_57	+	97965	.	PDB:4M4W_K	Replicative-helicase	MQSMESLARNIKPSQNIVEEQRNLKCNKCGNTYDYYKFSNGHEFRHGCDCTMIQAGKEAEKKRKQKYINNIFNQSTVNHSLQGATVNSYKPQNEQQTHAKNTAIEYVKTFSVDKPKSLILQGSYGTGKSHLAYAIAKAIKNEGYSVAFMHIPMLMERIKATYNKNATETTDELVKLLSNIDLLVLDDVGVENTEHTLNKLFSIVDNRVGKNNIFTTNFSDKHLNQDMNWQRINSRMKHNARTVKVLGDDFRERDAW*	rep_hall_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0023	shell	direct	high	770	0.999	GCA_001071965.1_01491
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	49516	49761	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	13550	13795	GCA_001071965_1_61_58	GCA_001071965_1_61_58	+	97965	.	PF11673.8	Protein of unknown function (DUF3269)	MGLREGYKDKYYLYTIDGWKMCSVIPLAEDMFNIGNYAGMHFQKVFNGNVTKEELNKLKRKYKLYRKEELQQQTTIDDYLF*	hhsuite_tools	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0024	shell	direct	high	245	0.996	GCA_001071965.1_01493
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	49770	50177	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	13804	14211	GCA_001071965_1_61_59	GCA_001071965_1_61_59	+	97965	.	PFAM:PF06356.10	Endonuclease	MSKYNAKKTEYNGIVFDSAVECDYYKHLENKMNGVYYNRIELQPRYELIPKFGKQRKTEYIADFALYLDGELVEVIDVKGMATDTAKLKAKLFRYKYPDVKLTWICKAPKYTGLEWIEYDELIKVRRKRKREKND*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0025	shell	direct	high	407	0.998	GCA_001071965.1_01494
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	50170	50364	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	14204	14398	GCA_001071965_1_61_60	GCA_001071965_1_61_60	+	97965	.	.	hypothetical protein	MTEPREETVTVNATVKIKCKFPVWLNKHTTVEDEKEKLLDVIAENPEKELMNENFEFIDLVEVE*	.	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0026	shell	direct	high	194	0.995	GCA_001071965.1_01495
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	50424	50729	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	14458	14763	GCA_001071965_1_61_61	GCA_001071965_1_61_61	+	97965	.	PFAM:PF07768.10	PVL-ORF-50-like-protein	MEENFIDIYVVRQRIKKGWDYNEAIEAPAGMRRKEWDKLKRMERLNEMEEAESLKERIQRRRMEELRRKKPHLFTVPQKHGRGKWCSHLMENDIFPKKVAR*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0027	shell	direct	high	305	0.997	GCA_001071965.1_01496
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	50931	51161	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	14965	15195	GCA_001071965_1_61_62	GCA_001071965_1_61_62	+	97965	.	PFAM:PF11753.7	nucelotide-kinase	MTDMINQPPHYTYGDIEIIDVIEMITKEYPSELAFVIGNATKYISRSPYKNGVEDLKKARWYIDRAIEKWSEDDGR*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0028	shell	direct	high	230	0.996	GCA_001071965.1_01498
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	51151	51339	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	15185	15373	GCA_001071965_1_61_63	GCA_001071965_1_61_63	+	97965	.	PFAM:PF04936.11	host-nuclease-inhibitor	MGVKAKYEYVVYKGDEILSAGTANEIIEKMGITETHKRAYEADKSNRRTIVAIKVPIAELED*	phrogs_hmm	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0029	shell	direct	high	188	0.995	GCA_001071965.1_01499
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	51342	51500	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	15376	15534	GCA_001071965_1_61_64	GCA_001071965_1_61_64	+	97965	.	.	hypothetical protein	MVKIKEIQTDGTYTIYDSNDNTINITKEEFEEIKQYSIDSEYNFLSSEDTQA*	.	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0030	shell	direct	high	158	0.994	GCA_001071965.1_01500
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	51514	51921	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	15548	15955	GCA_001071965_1_61_65	GCA_001071965_1_61_65	+	97965	.	.	hypothetical protein	MPKIKVEKQMNLEELIKYAKETSLKRRVFKCRHKNGEVVFDTEGKFCSHGWISEDDTFTVEDEIEVTENTILPYLVQVVEEETIKPRKHIYQHRYASINEIIQKETPVLTKILSFHILKVDGTMILLWRNGEMVE*	.	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0031	shell	direct	high	407	0.998	GCA_001071965.1_01501
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	51918	52355	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	15952	16389	GCA_001071965_1_61_66	GCA_001071965_1_61_66	+	97965	.	PFAM:PF05869.10	Adenine-specific-DNA-methyltransferase	MSVHFSSKSNEWYTPQYLFDELNEKYQFTLDPCASHENAKCDKYFTIEDDGLTKDWSKDIVFMNPPYGRNIKHWIKKAYEESVKGATVVCLIPARTDTTYWHDYIFNNAYNIKFLKGRIKFGGAVNSAPFPSAIVVFKPKGDGLK*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0032	shell	direct	high	437	0.998	GCA_001071965.1_01502
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	52352	52729	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	16386	16763	GCA_001071965_1_61_67	GCA_001071965_1_61_67	+	97965	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MMPKLRAYVKNGDKWLQIDSDKWGFLLKISPLLDSDVKVSDGMIVLETSKKHLVYSSGLTDFDGVEIFDKDIVKNIDSEELGVVEFDEGQFKVNFRGVSEQLWEIDKDIQIIGNTYRHPHLLERD*	mmseqs_cdd	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0033	shell	direct	moderate	374	0.989	GCA_001071965.1_01503
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	52808	53086	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	16842	17120	GCA_001071965_1_61_68	GCA_001071965_1_61_68	+	97965	.	.	hypothetical protein	MDELVKMTFSDGNGNVLREGYVAVTNEFLEQINVENHSITSPEYVKELKRKARAFDEIVEIYNDVDNFSDSDLIDVIEDKMNDLESDSDVES*	.	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0034	shell	direct	high	278	0.996	GCA_001071965.1_01504
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	53073	53249	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	17107	17283	GCA_001071965_1_61_69	GCA_001071965_1_61_69	+	97965	.	.	hypothetical protein	MWKVKEFEQEATKTDDLVNRFVKENNIKEYQVCGYQSIWVEGYEQHCSHILIKYWEDE*	.	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0035	shell	direct	high	176	0.994	GCA_001071965.1_01505
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	53251	53343	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	17285	17377	GCA_001071965_1_61_70	GCA_001071965_1_61_70	+	97965	.	pfam06260	Protein of unknown function (DUF1024). This family consists of several hypothetical Staphylococcus aureus and Staphylococcus aureus phage phi proteins. The function of this family is unknown.	MSKREQIEQAIISTGAFTGEDTETLLSEIE*	mmseqs_cdd	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0036	shell	direct	moderate	92	0.989	GCA_001071965.1_01506
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	53387	53557	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	17421	17591	GCA_001071965_1_61_71	GCA_001071965_1_61_71	+	97965	.	.	hypothetical protein	MERKVVKPKEYIAKPKGNFIIRNSAEIIIYSAIFGFVINLLNNALLFKILIQLEEE*	.	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0037	shell	direct	high	170	0.994	GCA_001071965.1_01507
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	53557	53982	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	17591	18016	GCA_001071965_1_61_72	GCA_001071965_1_61_72	+	97965	.	PDB:5Y5P_D	dUTPase	MTNQLEIKLLSENATMPTRANECDSGLDLYVSETITIPAHTTTIVKTDIAINLPYGYEAQVRPRSGKSLKTKLRVALGTIDKTYHKEIGIITDNIGDEDITVEKGERLAQLVVVPVVYPTPKEVKEFENESDRGAYGSTGE*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0038	shell	direct	high	425	0.998	GCA_001071965.1_01508
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	54019	54189	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	18053	18223	GCA_001071965_1_61_73	GCA_001071965_1_61_73	+	97965	.	PFAM:PF06116.11	Transcriptional-activator-RinB	MIKRILKIWFTISVYELGKWLGRELYYKLSANDEVDKAPLDFKNYDHIHLNAEVSE*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0039	shell	direct	high	170	0.994	GCA_001071965.1_01509
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	54346	54945	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	18380	18979	GCA_001071965_1_61_74	GCA_001071965_1_61_74	+	97965	.	.	hypothetical protein	MNHELLGGIYTLAGGFALYTVKEIIRFIVDANLNRKQANLINIYPIYSDVYKAAKMFIGSYATPILQPETLKYEDVQVLKKYELEKEIINGYKEYIDFRYLINLSYHLEKMRGLKKEFNNLFSVNQFCFDEQFIKKTISIDSVMSDDLNMLDQEIQSHLEKGSTDVEDKIINQSYKDKLVVYERYLDDFNKEFKKKFKI*	.	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0040	shell	direct	high	599	0.998	GCA_001071965.1_01510
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	54963	55109	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	18997	19143	GCA_001071965_1_61_75	GCA_001071965_1_61_75	+	97965	.	PF07438.11	Protein of unknown function (DUF1514)	MWMITSILLAIVLLISMGVQHEQRKMIKERDYYINALRYYNNHNSKSK*	hhsuite_tools	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0041	shell	direct	high	146	0.993	GCA_001071965.1_01511
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	55122	55556	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	19156	19590	GCA_001071965_1_61_76	GCA_001071965_1_61_76	+	97965	.	PFAM:PF05263.10	transcriptional-regulator	MSTAYDIKPGTFKYIESEIYNLHENKKEINRLRLEILNPTKEVDTNIVYGPLQKGEPVRTTELMATRLLTNKMLRNLEEMVEAVEYVYEQLPEEHKKVIRLKYWNKDHKLKMDQIGEACHMHRNTVTTIRKNYVKAVAMHAGIK*	phrogs_hmm	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0042	shell	direct	high	434	0.998	GCA_001071965.1_01512
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	55691	56026	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	19725	20060	GCA_001071965_1_61_77	GCA_001071965_1_61_77	+	97965	.	PFAM:PF05766.11	NinG-recombination-protein	MALTKEQRRTFYNSMAWRDKRSEVMQRDHFECQRCKRLGKVTIDELEIKKNNRKKIKLVVHHIKELADHPEYALDSDNLETLCVECHNEIHDRNFKTKYKNKIPKWNDEKW*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0043	shell	direct	high	335	0.997	GCA_001071965.1_01513
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	56175	56477	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	20209	20511	GCA_001071965_1_61_78	GCA_001071965_1_61_78	+	97965	.	PFAM:PF05119.11	Small-Terminase	MKNKAKIKNYLLEKIEKDNPVQVEKVERYLNLLTIFYDLDKDIKAKGLMVETVNASQTFLKPNPAIAEKNKVNTSLISIEKSLGLNKQNEDEPSPRRGLV*	hallmark_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0044	shell	direct	high	302	0.997	GCA_001071965.1_01514
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	56474	58114	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	20508	22148	GCA_001071965_1_61_79	GCA_001071965_1_61_79	+	97965	.	PFAM:PF03354.14	Large-Terminase	MIRNKHVDDYINLWKTGKVLLNKERILLIAYLEKHILSRDDLYFDEEQIENFIKFTEKWYFPLQSFQKFIVPFVFLFEKEGNFLFYEQFFITLGRGGGKNGLITALSNYFISYLHGVPNYDISVVANSEDQAKTSFEEAYNMIERNELEDMFYLTKLVITDTETKSRFRFRTSNAGTKDGGREGCVIYDEVHRYEDSETVDVFSSGLGKVKWPREFFIGTDGYVREGFLDKLKERSMSILNGETPDDRLFPFICKLDDPLEVDNPEMWEKANPMFSKPMSDYAQGLFRKVKNQYNEMSFSPTKRQEFMTKRMNLPEVDLEKVVAPWEEIIATNRPFPILERKQCIGGLDYASIKDFAAVGLLFRDGDDYIWKSHSFVRKGFLDSVKLKAPIHDWEEQGLLTIVDEPSIDPLHIVLWFDRMRETYGLEKVIADNFRMDLLRPLFEDYGIEIEVIKNPRAIQSLLAPRIETMFANHHIVFDDNPLMRWYTNNVAVKIKPDGNKEYIKKDEVRRKTDGFQALVHALYRADELLEVDMNDSLDFLNAINF*	hallmark_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0045	shell	direct	high	1640	0.999	GCA_001071965.1_01515
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	58130	59290	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	22164	23324	GCA_001071965_1_61_80	GCA_001071965_1_61_80	+	97965	.	PFAM:PF04860.11	Portal-protein	MGLLDNILRRNKELTWMYDLDMFEDDTKNAYLKRTTLQTCIEFIARTLSQTNFKVTQDHKAIKDDTFYKLNVRPNTDMSAADFWQRVIYKLIYNNEVLIVVNDTKDLLIADSFERVEYALYPDIFKGVTIGEYEFERSFLMDDVIYLTYNNNQLNTFIEDMFGDYGEIFGRMIKAQMRNYQIRGVLKMDTSKIGKKDEQEKVQEYVNKLLKVFEENSVAVAPLTNMFDYTESSNANKGNSAPFSDITNLKKAMIDEVAKILGIPPSLIHGDMADLENAMESYIKFCIKPLLKKIEDELNAKLIPKNKLLKGKRIKAISIDKKDPLEMAEAIDKLVSSSTFTPNQVLILLGEDPSDDPNMDKYFVTKNYTTSNSENALKGGETNDED*	hallmark_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0046	shell	direct	high	1160	0.999	GCA_001071965.1_01516
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	59277	60026	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	23311	24060	GCA_001071965_1_61_81	GCA_001071965_1_61_81	+	97965	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MTKINVKGAIIPNNDKWVYDFLGMDATSPNDVIDALPSDNEDLEVIINSGGGDVYSGSEIYTTLKAYPGKVNVKVVGVAASAASVIAMAGDHVEMSPTAQMMIHNAWTVAIGDSNGMSKASEMLSGTNRGIANAYIAKTGLSEETILNLMNEETWLNAQDAVEKGFADAKMFEENTPQLVANSGQMISEDAKNRISSLKATAPQVNFDADEIAEKLYNLMNKEIDESKKLEKHEEKTPSAKNGFGRFVF*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0047	shell	direct	high	749	0.999	GCA_001071965.1_01517
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	60055	61191	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	24089	25225	GCA_001071965_1_61_82	GCA_001071965_1_61_82	+	97965	.	PFAM:PF06673.10	Major-Capsid-protein	MTINLSEDFKSARQELINSIKNGESEETQAKLYEGMLNELFEESKKQAAQEAEKVASLTTNDKQLNAADRKFYNEINKNVGYKEETLIPEETIDRIFENLTTEHPLLSEIGLKNAGLRLKFLKSETSGTAVWGQIFGEIKGQLDAAFSDETAIQNKLTAFVVLPKDLEDFGPAWIERFVRLQIEEAFAVALEAAFLAGTGKEQPIGLNRQVQDGVSVTGGVYPVKEAFSTLTFKDPDTTVAELTQVFKYHSTDEKGKSVAVKGNVNLVVNPSDAFDIQAQYTHLNAQGVYVTALPFNLNVIESVAQEAGQVLTFVKGRYDAYLGGGINVKKFDQTLALEDLDLYTAKQFAYGKAKDNKAAAVHKLDLANAPKSSATPK*	hallmark_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0048	shell	direct	high	1136	0.999	GCA_001071965.1_01518
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	61260	61559	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	25294	25593	GCA_001071965_1_61_83	GCA_001071965_1_61_83	+	97965	.	CDD:cd08054	Head-Tail-Connector-Protein	MISDEILEQFKSRMHIFHSAEDERLKNDLDMSYSVLKRDYGEFDINTNEEGKELVFERTRYVYNEQLQYFLKNFSTELNNFGIQNIVMKEDYNDGDDDL*	hallmark_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0049	shell	direct	high	299	0.997	GCA_001071965.1_01519
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	61540	61902	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	25574	25936	GCA_001071965_1_61_84	GCA_001071965_1_61_84	+	97965	.	PDB:2KZ4_A	head-closure-knob	MATTIYKRKKLQSGDFRTPVQFFTYVNDGPYPDEVEKDELFKCFAETYAPSMRDSEVLDVANNEVGLTIVIRDPLQTYIPRATHKVKVEDYRLEQDIYNIKDIRLDTPEIGFITMVLGTT*	hallmark_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0050	shell	direct	high	362	0.997	GCA_001071965.1_01520
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	61899	62300	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	25933	26334	GCA_001071965_1_61_85	GCA_001071965_1_61_85	+	97965	.	PFAM:PF04883.11	tail-component	MSVEIKGVSEVLKQIERRYGREAMREKSDKALNEASDYFLNTLKKEFESFKDTGASIDEMTKTKPYSKGSIYDRAILIEWVGPMNRKNIIHLNEHGYTRNGKKYTPRGFAVIAKALQASQYRYREIIKRELTR*	hallmark_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0051	shell	direct	high	401	0.998	GCA_001071965.1_01521
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	62302	62697	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	26336	26731	GCA_001071965_1_61_86	GCA_001071965_1_61_86	+	97965	.	PFAM:PF05657.10	tail-component	MNILNILRELIVSDAQLKEIIGSRVYYYEVPETSDTSKPFVVLTPINDDPSSFVSDKYLSESYFVQVDVETYKHQTTIDVTKRIRYLLFQMNMYQTSSQLDDYFKETKRYVMSRRYRGIPKNQFYKGERIF*	hallmark_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0052	shell	direct	high	395	0.997	GCA_001071965.1_01522
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	62739	63395	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	26773	27429	GCA_001071965_1_61_87	GCA_001071965_1_61_87	+	97965	.	PFAM:PF06488.10	tail-tube-protein	MGSYVAGFKRLHVGVFNDKADKVISKHIWEDENGGTVNMNVTGLAPDMVDMFASNKRVWMKKQGTNEVKSDIELFNIPSEELNAVLGRSKDKNGTAWVGEETRAPYVTVIGESADGMTGEPVYCALMKGTFSLDSMEFKTKGEKEEQPETTKLTGDWMNRNIEVDGDTKGIVYGYHEGKQGADEFMKKVFVGFDGSVSAPSNVSATGNTNSATVTSEQ*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0053	shell	direct	high	656	0.998	GCA_001071965.1_01523
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	63407	63634	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	27441	27668	GCA_001071965_1_61_88	GCA_001071965_1_61_88	+	97965	.	PFAM:PF16323.4	major-tail-protein	MSTKLQVFDKEGNVVGEAELNKDGTTKVSIHDLEPDTTYPKGTFKVAHVENNAQSELIDVPEFKTKPSKSKSKAQ*	phrogs_hmm	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0054	shell	direct	high	227	0.996	GCA_001071965.1_01524
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	63676	64017	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	27710	28051	GCA_001071965_1_61_89	GCA_001071965_1_61_89	+	97965	.	.	hypothetical protein	MIKFEIKDAKTGKTESYKKDFVTMGEAEKFWDFMAKVEKENEKSNPDTKKVRGMERQLVVDFFADQGLTEESILENMSTKTYSKVVNDLFREVQGEDESDSEDASEEVGKTEE*	.	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0055	shell	direct	high	341	0.997	GCA_001071965.1_01525
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	64068	64226	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	28102	28260	GCA_001071965_1_61_90	GCA_001071965_1_61_90	+	97965	.	.	hypothetical protein	MEQYGWTLTEVKEQPYFQLLEVLQDEGNKEEEKSEAEQKVYTGTDLKYLFGG*	.	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0056	shell	direct	high	158	0.994	GCA_001071965.1_01526
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	64241	70417	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	28275	34451	GCA_001071965_1_61_91	GCA_001071965_1_61_91	+	97965	.	PFAM:PF10145.8	minor-tail-protein	MEEKLQGLTLEMKLDSLGVQEGMKGLKRQLGVVNSEMKANLSAFGKSEKSMAKYEAQIKGLSNRLEVQKQMFNQAESELKKLNSDYKTAQTRIKGVEKAYLNLAEANKKDKVALDKSNQALKENNSELKKAENQYKRTNQRRNEAWQKLKQLRQAEKDLKNNTEATTSQLKRANDAVQKQATKHKELVQRYKEEGAQVQKLRSQNKELSNSNDKVKSTYDKTNTELKQAENEYKQLNNTIKNHSANLAKAEKAVNSERTSLNNLERSLGKVKADMSAFNKEQLISNSHFTKTANQADNVSKKFGVMGQKMTSAGRSMTVGVTTPLTLGLGAAVKKSADFEEQMSKVGAVSQASGRQLKAMSDEAVMLGAKTSKSASEVAKGMNELAQLGFNANQVMKAMPGVISAAEASGADMATTAQVMASSINSFNLKAENSGHVADVLATAANDSAADINYMGDALKYAGTPAHSLGISLEDTSAAIEVMSNAGLEGSQAGTALRASFIRLSNPTKKSQKAMDELGVSLTNSKGKFVGMPKLIEQFRDGMKGMTKEQKLANVAQIVGTEAASGFLALIDAGPNKINKYSKSLQNSDGASAKAAKRMRDNLKGALEQLGGAFESLGIKIGSDLTPAIRGAAGFVQKFTEGFTALPGWVRKSAIALTILTATIGPMLVAGGLLAGAVSKAAQGYASLNRQMAINTVETKLNAKANTQTAGSLALSGKASKGASGWFGRLGGSLLTTIDRFGGLGRAISVGIKFLGKLTIPLTIATTIFGVAYEKMDWFRRGFSDMGKLVNQVGESIDFSWIPNMGKAWDDFKNDMAKGLQDGLLFKGIHKLFNGIHSAASKASDKVNVLGKGVSKETKSALGTYVKYSDQSDKIFEQIRYNHGQITKKQANELISINKKMSSELISQLEKRKAKELKLDHDVLDGSKALSEKRKQAILQKATEEGNIRIRKAKELNKRIEALEEKAAKNGKLSKSETKELQRLYEQRNNLAVKSLSKGEKEQQRIMSRMSANRRAMSIKEASETIQESIKARKQAIKDAKKKYDAKVDEINQMVGLSKKEKNKLLNEAQDQYNKDVKKANAHHRTTLNNVKKSNKNVEKEINLSNGKVMSGMQKWFHGLTVDSKKAWDKMGKNAQHFGKLMSGAGKWFKGLGSSASKAWGNVNATIAKHSKSSYNSAKNWLGKTTKNAVSNFKDARNSAGKHWGNISSTISSKTKTAYGHAKSWLGKTTSNAISNFKSAKNSAGKHWGSMSSTIASKSKHIFGSVKTWFGKTSGNARGNLSNMLGNARKYWNRISDTSSSNSKSVFRSTSKWFGNAFKSLKGNMGNMLSNARSRWNKISDTAWSNSKSVYKGTSKWFGNAYSSLKSWTGSMYDKAHDRFDRISSDAWSNAKSVYKGFKTWLSNTLSWIRSVGKDMGDAAADLGKSVANKAIAGLNGMIGGINKISKAITDKNLIKPIPTLSTGTYSGASVATDSNGGVSSPTLAVVNDRGSGNAAGGGVQEVIHRADGSLEAPQGRNTIVHLNKGDGVINARDTKKMQNMGMIPRFAGGSKKKNWLENITDSAKDVAQSMLKGASKGTSHAKDVAKDKTKNVIDKAKEIGTDALESAEDAAMGIWGGIKGVTKDVGEFLEHPGKLVDKVMDFMKVNFGQGANTTVTMAKLSYEKLKKSLVDKVKQWFEDYGGDGDGGYIKYLDNITTPYSPNGPPPGYAFHWAHPGIDLPYHYEKVQSTTSGIARTKDTGNVGFGHHIVVEGKPYDVIYGHLSKWLVKNGEHVHPGTVLGISGSTGSSTGPHLHYEMNKHGFGSMTGHSIDPVKWLKTHNGSKGGGSRAASAWRPEVIKALKMNGLPASSAYVNAWIRQIQSESGGNAGAHQGVIDINSGGNEAQGLVQVVPSTFRANKFPGHGNILNGLDNLLAGIRYAKRTYGGRMLSVIGHGHGYENGGLVTKHQIAEIGEGNKPEMVVPLTKRNRAVQLIEQAMRYVGMDSKSTNVTVNNDNSLIEKLLSQMVAMSDRNNRLTEAIVGLLKQPSKSTDPRTAEQLLSQLQGDRYSKTAFNMGL*	hallmark_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0057	shell	direct	high	6176	1.0	GCA_001071965.1_01527
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	70432	71268	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	34466	35302	GCA_001071965_1_61_92	GCA_001071965_1_61_92	+	97965	.	PDB:2X8K_A	Distal-Tail-Protein	MNENRWLKIITDEGTVNINDILPNFLFLEAKASFPTSNNDNITIKGVDGELPGSVSFAPFSLVVKCGYDGLDLIDAALAENKLRSIFNKRKPYYVITSDNPNIKYAVKNPDISPDYGDYMAVKFELTFSVYKGYSESLYATDNFSLSNGKWQFESGLVVDDSIKYNHTTSGFKIYNGSDDVINPIMRHHLNIYLNVDAPKGFKLTNTTTGDVFEYTKPITSKQTLILQGVHPILNGQRVGIDTNFNFLTLAPGYNEIEITGSNLGKTNSKWVFNYIYR*	hallmark_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0058	shell	direct	high	836	0.999	GCA_001071965.1_01528
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	71277	72848	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	35311	36882	GCA_001071965_1_61_93	GCA_001071965_1_61_93	+	97965	.	PDB:3GS9_A	tail-protein-	MDHVVLKNKEGTYAEILNDIDYSTFKYDYEKNNERSLTFTIYKTNLNEDIFNNVKNEMYVVYQTQTYVIKSTAIKYDGVMISNEVTAKHIFMEFQNHYIDKDVDDEQMNSDNEDSNNDEAKPTYTLQQYLDFGFKGNKLGFTFVIKGTFKERVAVDELGNKNGMEYLTEGAELFGYIYYADNKTIYIHDDASFYEMSDEPFIYHYNTDEVSATISTLDTKTVIKGYGKKKEKSDTKNYNPIKPKDLTYSGTFDKSGTWSTTTVGASYSKQFECKWGNETLVWTLKKMAKGGLVDVYLDDKKVGSYECYSKSAQSEQITISKNLAKGTHTFKVVFTGKKSGVDYKKSKPCMYVGTEKSTVLNLTAVLSGKDMYYAYQEYKSPNYDIFGEMVAPTVFDDTALDNDMLLKSLKAQLNDQPTVELATNYLGLEQIKDNNMIRFIHKPLGFNTDLKVVKLSAPHAYVNESVQVEFSNASKDIVQIQNQINRNIKNVNSLVKSGALSKGATISMPKNYSDIVGVVLSDD*	hallmark_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0059	shell	direct	high	1571	0.999	GCA_001071965.1_01529
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	72841	73284	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	36875	37318	GCA_001071965_1_61_94	GCA_001071965_1_61_94	+	97965	.	PFAM:PF10651.8	minor-tail-protein	MTEINIRYLQDNDGDRYYPVTHVDAIAGTSVDDWTKFNLDKPATQNTAFKDETPQGFDCSYKTLELFDLKVKSIRINASNVKDGQLLTTLSDDFDLPLTPQSFYVRTPSTRQAGIVTLRPDGTLYFYNKDSNWTTTDYIYSQYTWIE*	phrogs_hmm	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0060	shell	direct	high	443	0.998	GCA_001071965.1_01530
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	73296	75959	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	37330	39993	GCA_001071965_1_61_95	GCA_001071965_1_61_95	+	97965	.	PFAM:PF11962.7	Peptidase_G2	MKFNFPIELGEVFRRYTIENFRELKYYFDEAKQKLIDHQKTDKHAHNANQIDYVTDYSNTIDEAIKKLKAEHDNMVIGANGDGIAEVKNSRVTTDGVAKDLLSQRLDADFSKLSNKIEENYNLLNTKIERIVNVNDFGGDPTGQTDSTQAFVKAFGKGNVHVHMTAGTYVIKGLKLPNNTILSGEGKGITFLRIADDAPAETIGITNLYMDGTAENIGVEDFTIDGNKFRQNKSLQPAGGSRSSNIRFAGVKGGFMRRIKSYDSLLHSFDVTYASDDYYYAGDGVRVKEALESKYIHIDNCEATGFGDDGITTHHSRYLLLTNNYSHDPTPDSGNHNGMEIDDGSQHVFGANNKTENCFGGLEIKAHEPTSAASDVVFNNHLDIRSIRSYNIRHIGHHKATDAKSKTAYNVTLNNCVALYPQYNGAYEGATPRALVVCAYRNVNINNFTAIGDGNFMAGMPVIVVQYRAENVNLNNINIRGFSNAMADIKIFGGANRPKKVTISNVNIVESSKNIGIAGGGGVYDTKIIGGNLQGTGTGNAIEMYNNTAEIIGVNAENYNRAAVISGKEYFYVPSVHKGGFTGGATGSAAIAQRSAVMATTGNSFATSNRSWLLGVGANSTASGSRSGIMNSLESMTNPSNYVQTIVNSRGVKSLGNYHFQMGYNADGTPKESATTIDMVSTSGNIRTKGTVQSGQNFGDYAEYFESQSGQPIPTGTIVTLDGRYVRKAQTNDIPLGVVSGTAGVVLGDQMFHHKDKYLKDEFGVTLTQSEEHTWEDDEGNVYSEEVERPIPNPDFNENYDEEEYLSRSERPEWNIIGLIGQVFIRVDETVSANDYIKPNNGVGTKDNVNGFYRVMQVTTPYSQEKGYGVAVCYVHPISLFNKGSVG*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0061	shell	direct	high	2663	1.0	GCA_001071965.1_01531
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	75959	77677	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	39993	41711	GCA_001071965_1_61_96	GCA_001071965_1_61_96	+	97965	.	PDB:4DIV_C	Distal-Tail-protein	MQDEIKKVGRLTLYDEPYEKTVSDSGIVFYNLDINTAVLEFTISKNNFPLQISDENVDTYVYLEGTDQNGNSYGRQLDVEYVDPFKGLVRLTVPDDYLKAVNNSTVTGQMYIGVHKGNRVPETKADTAVLNEFKFTVKDALINSVSAVTKIEYIRMFDKLKDEIKQRVKDIEDAIANGSDYVAQMKNVLADGLKQINTTVTQAKKDVNDTATNANNSITTTSNNAVNTVTQARDDVLNAIKNNQVVKTADLPNQFNALKWQKFQLTNDDGSIVTVKDVVDMNTLNNISNTGPYYCSNLINTPDGRSKFGYINVYNQGSSAGWAIYREYNSNVLYINMKYLSTWQGWSLVNPDYSKTLNWQKYKLTNDDGTLTSVSGLDLSSTTVLNSLKPGMYYGNNFINAPVPAGFLEVVSRADNTIKRIELKPYNTKDTYVMTYTNSTWSSWQLMNAQPTFSDTGWLPLVLSNGVQPYSTGYTPQYKLVNNNGDVTLKFKGAVKNITTSGVAIATLPSNIASQVTMNSAFVQNSSVKSGNATIARWSVTTSGDLRLDGVSFSNSLMTADDFYPINAVIPL*	hallmark_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0062	shell	direct	high	1718	0.999	GCA_001071965.1_01532
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	77692	78048	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	41726	42082	GCA_001071965_1_61_97	GCA_001071965_1_61_97	+	97965	.	PFAM:PF09693.9	tail-fiber-protein	MDFKQVYLTNGQPYLAFKGEDGEYQYPKDEWTETPPPAGGYQPMHFDGNKWVCATREEWLKSQKPVEVKPDATSETIAQLLMNDLEHNARLEMLEQAIAGLTNQLLQQQEEITNVRNS*	phrogs_hmm	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0063	shell	direct	high	356	0.997	GCA_001071965.1_01533
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	78032	78172	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	42066	42206	GCA_001071965_1_61_98	GCA_001071965_1_61_98	+	97965	.	pfam09693	Phage uncharacterized protein (Phage_XkdX). This entry identifies a family of small (about 50 amino acid) phage proteins, found in at least 12 different phage and prophage regions of Gram-positive bacteria. In a number of these phage, the gene for this protein is found near the holin and endolysin genes.	MYVTLKNLYIMKLFTKEKLAETVKYNWITADQYKDITGEEYKRPQA*	mmseqs_cdd	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0064	shell	direct	high	140	0.993	GCA_001071965.1_01534
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	78210	78632	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	42244	42666	GCA_001071965_1_61_99	GCA_001071965_1_61_99	+	97965	.	.	hypothetical protein	MDKQKDTKGLLLFVAIEGIAGLGFSRGFFFAKEQENVLSDSDFYLALHHILPIWIWGIIMMIVSLILGLSAYFIPKHHINNTCNWLLFIGGFGSAFVYFLMTSASIYHAINWLSTLQFTIFTIVCGIIGFLGGADLYDRK*	.	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0065	shell	direct	high	422	0.998	GCA_001071965.1_01535
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	78619	79014	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	42653	43048	GCA_001071965_1_61_100	GCA_001071965_1_61_100	+	97965	.	.	hypothetical protein	MTENKHFVTEAKWQESREELIDRINNVDSKHTINYGKLSEKIAEGNAYQKQSYEVQKDTNQQMKQLNETNGKQWDAIKEIKFVVKNHEEDIEEVKGSVKERQKNNTNITIALIGGGATVISAAFGLAKLLF*	.	hypothetical_protein	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0066	shell	direct	high	395	0.997	GCA_001071965.1_01536
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	79066	79332	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	43100	43366	GCA_001071965_1_61_101	GCA_001071965_1_61_101	+	97965	.	PFAM:PF04688.12	phage-holin	MKIDNGTLVRTILLILAWVNQILAMNHISPIPVDEMTISTVITGVFSLWAWWKNNNFTHAAKKGQEKIHEVKAGTENTNGKAPIGGNE*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0067	shell	direct	high	266	0.996	GCA_001071965.1_01537
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	79332	80714	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	43366	44748	GCA_001071965_1_61_102	GCA_001071965_1_61_102	+	97965	.	PDB:4OLS_C	Endolysin	MTNKTRAQAHAYLRKLKGYWWDFDGVYGAQCFDLANQYWYYVTGHALRGLYAKDIPFANNFDGYANVVKNYSSYVPKKGTLVIFPYEYGNGSGHVAIIESATQNYFYSLDQNWYGGAQNNPPEVAQTIYHEYHKDMYFIEPLYGKETIVSKTKARMVKPKPIKNVKKKKIMIVAGHGYNDPGAVGNDTNERDFIRKNIVDNVANYLKDAGHTVKIYGKKQDMYQDTAYGQRVGNHKDYGLYWVKSQGYDTVVEFHLDSAGPKATGGHTIIPAGYPANTIDKNIQNALKESIGVIRGITQRNDLLNCNVANDIGIDYRLVELGFITSNKDMKYIKKNLKPFTKSIASAINGKPIGGASAGKVKSVKKTWDWKGRFYPNTTIKVRKKPNGEIVEKGSWLYGKDDWVDVVQLYKDTKKKLWWGKFKYPTNPNAGYFYCALGEITDKQERIKKEEKLYGKIKWK*	common_virus_hmm	common_virus	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0068	shell	direct	high	1382	0.999	GCA_001071965.1_01538
GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote	cenote	CDS	80915	82087	GCA_001071965.1	JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965.1_JVOH01000084.1	GCA_001071965.1|JVOH01000084.1	GCA_001071965_1_61	GCA_001071965_1_61@C1	44949	46121	GCA_001071965_1_61_103	GCA_001071965_1_61_103	-	97965	.	cd17474	Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily. This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	MEKTIGYNKITTILFFSGILVMCSLYTALPLTATFSKEFKVTEGFAALNGVVFSVMYSISCLFYGTISEKFGRIKTIVFSLAGLTIICLLIGFVNSFTLLLLLRAFQGVFAASFSPISITYVTETYTISKRVTAISFISISFMLAGIIGQNLSEFIISYFDWHVVYFVLTAFYVLLSISIHKYVPESPIKNADIKVTHFLKNFKSFKTNLYVLLCYGISLTLLIIFISMYDVFNRYISSSDVDASDMLESNARLFGIVGMLIALLAGRISEKIGVKNLIIMSLVMISICLILMPFLTNLAMLVFLSVIIVSGVAFAIPTTISEVGILVNENRGFFLSVNTFILFLGTAIAPVLNIFLQGLSNFKLQFIVIFIISFIALVFSIFLPKQTSK*	mmseqs_cdd	nonviral_gene	C1	46121.0	35967	82088	GCA_001071965.1|JVOH01000084.1@region_35968_82088@tool_cenote_CDS_0069	shell	direct	high	1172	0.999	GCA_001071965.1_01539
GCA_001071965.1|JVOH01000114.1@region_1_1781@tool_cenote	cenote	CDS	1	153	GCA_001071965.1	JVOH01000114.1	GCA_001071965.1|JVOH01000114.1	GCA_001071965.1_JVOH01000114.1	GCA_001071965.1|JVOH01000114.1	GCA_001071965_1_85	GCA_001071965_1_85	2	154	GCA_001071965_1_85_1	GCA_001071965_1_85_1	-	1781	.	CDD:COG3728	Small-Terminase	MSKLNPRQEKFVAEYLKTLNMTQSAIKAGYSPHTASEQGSRLLKNKKVAKY	hallmark_hmm	common_virus	NaN	.	0	1781	GCA_001071965.1|JVOH01000114.1@region_1_1781@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_001071965.1|JVOH01000114.1@region_1_1781@tool_cenote	cenote	CDS	192	407	GCA_001071965.1	JVOH01000114.1	GCA_001071965.1|JVOH01000114.1	GCA_001071965.1_JVOH01000114.1	GCA_001071965.1|JVOH01000114.1	GCA_001071965_1_85	GCA_001071965_1_85	193	408	GCA_001071965_1_85_2	GCA_001071965_1_85_2	-	1781	.	.	hypothetical protein	MARKYNLDKVYNYIMTETTLSGEECSDLLDVVEEQFSQNIKAQRKDELAQQSKASKRFSDLAKENRIIKDK*	.	hypothetical_protein	NaN	.	0	1781	GCA_001071965.1|JVOH01000114.1@region_1_1781@tool_cenote_CDS_0002	cloud	direct	high	215	0.995	GCA_001071965.1_02368
GCA_001071965.1|JVOH01000114.1@region_1_1781@tool_cenote	cenote	CDS	407	994	GCA_001071965.1	JVOH01000114.1	GCA_001071965.1|JVOH01000114.1	GCA_001071965.1_JVOH01000114.1	GCA_001071965.1|JVOH01000114.1	GCA_001071965_1_85	GCA_001071965_1_85	408	995	GCA_001071965_1_85_3	GCA_001071965_1_85_3	-	1781	.	.	hypothetical protein	MKTAKHFDEYNEYVSGQRENINKLEDERQELSQRIKEDKEKYKDLIASSKDDEADALYSTFDKNEQKLKALQKRLETKQEVFDDARRKKAIEILKHQGELPRLYQEDKERILSKFVPIIKEYNKVIEEIEALNNEYEDEFYRYVKLYDLEDFEEDNEARDEIKNYFSPNQYSNYVGADKLPFIDTRNKLRNRGAK*	.	hypothetical_protein	NaN	.	0	1781	GCA_001071965.1|JVOH01000114.1@region_1_1781@tool_cenote_CDS_0003	cloud	direct	high	587	0.998	GCA_001071965.1_02369
GCA_001071965.1|JVOH01000114.1@region_1_1781@tool_cenote	cenote	CDS	1076	1408	GCA_001071965.1	JVOH01000114.1	GCA_001071965.1|JVOH01000114.1	GCA_001071965.1_JVOH01000114.1	GCA_001071965.1|JVOH01000114.1	GCA_001071965_1_85	GCA_001071965_1_85	1077	1409	GCA_001071965_1_85_4	GCA_001071965_1_85_4	-	1781	.	.	hypothetical protein	MTITIEKELTSDHIRVLNVLRNTKQEIITKQSIFNQLNIEFNKNNDRWLRNTIHSLVVDYGYAIGYSYKKDSKGYFMVKSDEQKELALRSIKRHIEGSLKRYEALKKTEI*	.	hypothetical_protein	NaN	.	0	1781	GCA_001071965.1|JVOH01000114.1@region_1_1781@tool_cenote_CDS_0004	shell	direct	high	332	0.997	GCA_001071965.1_02370
GCA_001071965.1|JVOH01000122.1@region_1_2816@tool_cenote	cenote	CDS	1	2813	GCA_001071965.1	JVOH01000122.1	GCA_001071965.1|JVOH01000122.1	GCA_001071965.1_JVOH01000122.1	GCA_001071965.1|JVOH01000122.1	GCA_001071965_1_92	GCA_001071965_1_92	1	2814	GCA_001071965_1_92_1	GCA_001071965_1_92_1	+	2816	.	CDD:pfam05371	Filamentous-Major-Coat-protein	VSGLPEGVSFDSATNTISGTPTKVGSYPIVVTTTDAEGNATTTNFTIAVVDTTKPTVTSIKDQTQEVNTAIDSIKVEATDNSGQVVANIVSGLPEGVTFDSETNTISGTPTKVGSYPIVVITTDASGNETTTNFTIAVVDTTKPTVTAIKDQTKEVNTSIDSITIEATDNSGQAVTNKVSGLPAGVSFDSATNTISGTPTKVGNYPITVTTTDAEGNETTTSFTIEVVDKTAPTVTSIKDQTKEVNTAIDSIKIEATDNSGQAVINKVSGLPDGVTFDSETNTISGTPTKVGSYPIVVTTTDASGNKTETKFTIEVVDKTAPVVTSIKDQTQEINTAIDSIKIEATDNSGQTVTNKVIGLPEGVSFDSETNTISGMPTKVGSYPITVTTTDAEGNETTTNFTIKVVDTTKPTVTAIKDQTKEVNTSIDSITIEATDNSGQAVTNKVSGLPAGVSFDSETNTISGTPTKVGSYPIVVTTTDASGNETITKFTIQVIDTIKPVVASIADQTKEVNTPIDSITIEATDNSGQVVTNKVNNLPEGVTFDSETNTISGTPTKVGSYPITVTTTDASGNKTTTNFTIQVVDTIKPTVTAINNQTKEVNTPIDSIKIEATDNSGKAVTNKVSGLPDGVSFDSVTNTISGTPTKVGSYPIVVTTTDASGNKTETKFTIEVVDKTAPTVTAIENQTKEVNTAIDSIKIEATDNSGQAVTNKVSGLPEGVSFDSETNTISGTPTKVGSYPITVTTTDAEGNATTTNFTIKVVDTTKPTVTSIKDQTKEVNTAIDSITVEATDNSGQAVTNKVSGLPEGVSFDSSTNTISGKPTKVGSYLIVVTTTDASGNKTETKFTIEVVDETAPTVTAIKDQTQEVNTPIDSIKIKATDNSGQAVTNKVSGLPAGVSFDSSTNTISGTPTKVGSYPIVVTTTDASGNKTETKFTIE	hallmark_hmm	common_virus	NaN	.	0	2816	GCA_001071965.1|JVOH01000122.1@region_1_2816@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.