core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	genomad_gene	genomad_length	genomad_strand	genomad_gc_content	genomad_genetic_code	genomad_rbs_motif	genomad_marker	genomad_evalue	genomad_bitscore	genomad_uscg	genomad_plasmid_hallmark	genomad_virus_hallmark	genomad_taxid	genomad_taxname	genomad_annotation_conjscan	genomad_annotation_amr	genomad_annotation_accessions	genomad_annotation_description	genomad_element_name_std	genomad_element_name_orig	genomad_element_gene_wrt_to_contig	genomad_element_gene_wrt_to_element	genomad_element_gene_start	genomad_element_gene_end	genomad_protein_translation	genomad_phage_region_id	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	10639	10842	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_18	204	-1	0.275	11	GGA/GAG/AGG	GENOMAD.193400.VV	3.174e-31	116	0	0	0	1	NA	NA	NA	PF06855;COG4479	Uncharacterized protein YozE, UPF0346 family	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	18	1	1	204	MTFYDFILGFINDDTPLGSLANYILDDIHFPREEKNNKAIRAYVLDHYRDHQLIESTNRAISLYKLI	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0001	persistent	direct	high	204	1.0	GCA_001073365.1_02163
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	11281	11538	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_19	258	1	0.244	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	19	2	643	900	MKIFSINVINILLTILFIAFNVLITYNANVDNQLWLIPGLCICGVALFTSLIIAIIYTDLLSEIIFFINIVLALYYIYPIFYDFL	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0002	persistent	direct	high	258	1.0	GCA_001073365.1_02164
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	11571	11756	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_20	186	1	0.274	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	20	3	933	1118	MSLHFQILLWLAIIFIVAGAIILTIMLKTKKEERKESYLGFTVIFLIFGFAMLIYTLIFGL	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0003	persistent	direct	high	186	1.0	GCA_001073365.1_02165
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	11950	12534	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_21	585	1	0.306	11	AGGA/GGAG/GAGG	GENOMAD.105299.PP	2.189e-79	262	0	0	0	1	NA	NA	NA	PF05708	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	21	4	1312	1896	MKTKYKLTILFITLVIVLLILFSINVFNKDKESYESIDTKEFKLKPGDIIITKGPVLFGFFGHSSIAIDEDTVLQIEGPGDQPITESFESYQRRFGTGKDDWIKVYRSVKPDAGQKAANWVKRNYENSDSRYLVTLNLKSQKFTYCTKIIYQAYKYGVDKNAVSDHGLYIISPYALKDNFTHDYRLKLVKNIKN	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0004	persistent	direct	high	585	1.0	GCA_001073365.1_02166
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	12597	12866	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_22	270	-1	0.296	11	None	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	22	5	1959	2228	MCYFIIKGCDVVMDKELLRRYLNDDSFKAVAVVVGNKKIVLENDIHVDYENEIIIYPLKNCTRIIPFSSISYLDLLDRNEQFVNYFKEV	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0005	persistent	direct	moderate	234	0.867	GCA_001073365.1_02167
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	12964	13569	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_23	606	-1	0.317	11	GGA/GAG/AGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	23	6	2326	2931	MEDIQIKSAQSSDKEGGRLTHLAIDEMAQVILGETSNERLNKQLQQLWQKKGNRFSHDISYVAKEEGQVLGAITCTSLVKLEKSMFQTVLEIIKMKKLKSLKIILSNFKKIYSLITMDEGEKDEFHVSMLATLPKARGKGVGTKLLKFAERLAINDGFDKISLTVVQDNKKALSVYKKFGFSIVGEINQSPFYLFKMRKNL	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0006	persistent	direct	high	606	1.0	GCA_001073365.1_02168
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	13750	14496	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_24	747	1	0.321	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	24	7	3112	3858	MSNKGSLYSILYYLAIALIVITIIVVVLIFYNTRKSASKPSSDRYSDFEELKKNTTKNKDWRIVTKHRKDNNILLTAIHGGGIEPGTTELARRVSNVGKYNFYSFEGLRKHNNDQLHVTSTNYDEPKLINMLEKSNETISIHGSSGDDPIVYIGGKDTKMAKAIAKALRKKDFTVKESPKEINAQSDDNFVNKNDTDSGVQLELTTAQREEFFKHHKLDKTTRGNPKKYTRDFYKFANAVEKGIKKAK	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0007	persistent	direct	high	747	1.0	GCA_001073365.1_02169
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	14617	14901	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_25	285	1	0.277	11	GGAG/GAGG	GENOMAD.088178.VV	4.605e-48	166	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	25	8	3979	4263	MDELTKEQKYTVAKFYKLYMERSNEGLSEEQSNDFKDSITTQDDYFCGREYEDFIHNCKVLIEDGYLEGDIEDQTIYNIKLTTKAFTEIEKSFG	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0008	persistent	direct	high	285	1.0	GCA_001073365.1_02170
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	14925	15149	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_26	225	1	0.249	11	GGA/GAG/AGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	26	9	4287	4511	MDNWKIDNHSNRKFLIQKNEGELSIVEPLDNGAFKILAEINLSNENDVNIYDSHLYVSVSLEQEEICIFDNNNT	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0009	persistent	direct	high	225	1.0	GCA_001073365.1_02171
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	15459	16193	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_27	735	-1	0.283	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	27	10	4821	5555	MHKAKMILNEVPTMLKSLKNIFNIINGNKDYYNPKIDMKKEDDNLNGKKIIFLGSSITYGAASKGISFVEYLTTEYEVKGIKEAKSGTTLAGKNVNSYLNRLRKLNFVNTKIDAVVIQLSTNDARFGYEIGEMSQSFDLESFDTETTLGAIEYIIKYVHTKWHCPIIFYTCIRENDLTYKQLVNHLYPLKTKWDIHIIDIFNNDEINKLAESDKEMMADDSHPTKKGYRYLYTPILVKQLDEIL	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0010	persistent	direct	high	735	1.0	GCA_001073365.1_02172
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	16316	16516	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_28	201	-1	0.378	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	28	11	5678	5878	MNNGTVKWFNSEKGFGFIERENGGDVFVHFSAIVEDGYKSLEEGQNVEFDIVEGERGEQAANVVKM	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0011	persistent	direct	high	201	1.0	GCA_001073365.1_02173
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	17526	18098	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_29	573	1	0.291	11	AGGAG	GENOMAD.105337.VV	3.803e-05	46	0	0	0	1246	Caudoviricetes	NA	NA	PF08139;COG5633;K19975;TIGR02747	Uncharacterized conserved protein YcfL	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	29	12	6888	7460	MKKFFAVLLSSFLVLSACSHSDHSDKKDSDKNSSKTESKKSDKKDSKGDKKVNNAKDNIKDSKLGKKSKDKSSKSKDSKPKNKQTNQQSSNSASQANNTSTQPQNNNANNANNTNGNNQNSYNNQANSQNQQQNQQQNQTNNTQQNNSQRQQPSQNNQQQYSTGNNQSANNSQSMNNSQGQTNTNTQRGF	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0012	persistent	direct	high	573	1.0	GCA_001073365.1_02174
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	18220	18651	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_30	432	-1	0.271	11	GGA/GAG/AGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	30	13	7582	8013	MSLTRRKIEKKDYHKVLDIWEKSVISTHDFLKEKDRLELKTEIPNYLNNVEAYFWCDDDEIIGFSGTNDQNLEMLFIDPKYFRKGYGTQILQTLIREDQVRYVEVNKENYNAVKFYQKNGFEKYKESLKDQQGRDYPIYYLKL	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0013	persistent	direct	high	432	1.0	GCA_001073365.1_02175
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	19012	19473	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_31	462	1	0.238	11	AGGA	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	31	14	8374	8835	MCSELIVASISILVVCIISNLEFKCKKFFTGLSHFIIILFYAGGLTPSTSHYRAFLIFASIYLIMNISINLLNFYGYLNNLKQTIHNLSSIDNIEKLKNRNTNIRIFIYTLSLSFSIIAYYTHKMEDINNVFATVIILDVLIDLILSKFIKNY	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0014	cloud	direct	high	462	1.0	GCA_001073365.1_02176
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	19597	20142	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_32	546	-1	0.264	11	GGA/GAG/AGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	32	15	8959	9504	MDTLCRNKKSVVIFILVTILLLAISFLTPLLETLVSKDNREELFSFIETIVSFSSITTAFLFFGVSFIPMISEDNKIMKVFRNNEKNYEEFIVCAIQFLLVSTVAIIFYFCHILHFIYEEILLFFMLSFLFSAIINMILLFFALLNDISKKSEVEISFLDLNATHKVAFFTLREALCCSGE	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0015	cloud	direct	high	546	1.0	GCA_001073365.1_02177
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	20147	21190	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_33	1044	-1	0.264	11	None	GENOMAD.141545.VV	6.1e-14	76	0	0	0	1	NA	NA	NA	PF20505	Intracellular sensor of Lambda phage, Abi component	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	33	16	9509	10552	MQLVSLPDISCFFNIQTFLFCATKYIIRKTTHERGNGENEKHKKTYDFFKLKFENDEWEVNDYTHINDYFENVLEQLEQDSNNDVDFIQINDEIHIGINRIEKYYYDNTEVWILCLSKVNTTRLAVVSDIDKQVKDGREEYGEDPNKGLTTDTVILICPTTGLVIIPRNNGGISQKNLTDFINKELATTGSTLSIVINGTKVTNLKSIDEINEVQVNVVRSVDPNKFKNPRRSKTKDKEIMDFLGGDKMNLVMKSDKSKSLNKDSVINFFRRLNISKRRNAKKFVVIGKHDGHDQIIDLITNRLIYFDNEVRLNNKNKLTIDSMFNSIKKAYRDNKRIVYLDIFGSE	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0016	cloud	direct	high	1044	1.0	GCA_001073365.1_02178
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	21796	22158	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_34	363	-1	0.284	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	34	17	11158	11520	MRLRKAAINYLESELIYYNHLSRDIERIRNSKVYPSQYDKQKALKNRRLKQLTRIKEAIEYVYITSNVDSRILIDRYYFNNIDNLNLTGVALTINVSKSTAYNLRNDILLRLSDELGLLH	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0017	shell	direct	high	363	1.0	GCA_001073365.1_02179
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	22216	22380	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_35	165	-1	0.327	11	None	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	35	18	11578	11742	MIDEEVVIWNGLHAAERVGIILPFDLMLVKNGVDRRIVPSIKLNDDRIFIYPNR	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0018	.	unmatched_CDS	none	0	0	.
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	23437	24006	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_36	570	-1	0.368	11	AGGAG	GENOMAD.168355.VP	3.89e-35	134	0	0	1	1246	Caudoviricetes	NA	NA	PF03592;COG3728;K07474	Phage terminase, small subunit	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	36	19	12799	13368	MSDLNPRQEKFISEYLKTLNVTQSAIKAGYSPHTATVQGSRLLKNEKVAKYIDEQRKKVIDEGVLSANELLHILSNAAVGDESEVREVVVKRGEFQRNPDTDRMNLVYNEHVEMVEVPIKPSDRLRARDMLGKYHKLFTDKKELSYDTPVFINVGEWDGDEEEQQQLIDSVGEEHPNRPILVDNIPTKD	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0019	shell	direct	high	570	1.0	GCA_001073365.1_02180
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	24017	24346	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_37	330	-1	0.285	11	None	GENOMAD.156435.VV	1.912e-48	168	0	0	0	1246	Caudoviricetes	NA	NA	PF11242;K01994;TIGR03879;COG1342	probable regulatory domain	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	37	20	13379	13708	MMYDKQAIKQFIMDYHKEKVSNVVSYDDTNVDDFFSLSDEVEPFVLNENTGNQVFFNELDQLIYTVGTRREYYIFFLLCEGKSMNEIAKIFNLSRERIRQLLNGLLDKL	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0020	cloud	direct	high	330	1.0	GCA_001073365.1_02181
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	24343	24780	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_38	438	-1	0.311	11	GGAG/GAGG	GENOMAD.131910.VV	1.325e-69	231	0	0	0	1246	Caudoviricetes	NA	NA	COG5577	Spore coat protein CotF	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	38	21	13705	14142	MNLKKVKYPLIYHENKISEYTLLTEYNPKFINTKIKAITMQIDMMYHLNISHMTTNDVHGVVSISYPLEKLVIDIIGEKEKLKRFKTKANRNMQQLKQVIKRYTPGEQKEIMYYMQSNGSTIDYDLIERLQRDLYAYKHKVSVAT	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0021	shell	direct	high	438	1.0	GCA_001073365.1_02182
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	24835	25044	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_39	210	-1	0.329	11	GGAG/GAGG	GENOMAD.189122.VV	2.413e-27	105	0	0	0	1	NA	NA	NA	PF16722	Pathogenicity island protein gp6 in Staphylococcus	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	39	22	14197	14406	MARKYNLDKVSNYLLTETELSAEECQKVLDVVEEQFSQNIQQQRKDELTQQSQRDRRLKEMFEENRIVK	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0022	shell	direct	high	210	1.0	GCA_001073365.1_02183
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	25044	25631	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_40	588	-1	0.291	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	40	23	14406	14993	MKTAKYFDEYNEYVTGQRENINKLEKERQELTQQIEEDKAKYKELITNSKDDEADKLYSTFDSNEKKLKALEKRLATKKEVFDEARRKKAVDIIKRQGELPNLYQNDKERILSKFKPIIDEYNKVIDEIEILNDKYGAEFYRYVRLYDLENFEEDEVVRNEIRNHFNPNQYSNYIGADELPFVDTRNKLKNRGAK	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0023	cloud	direct	high	588	1.0	GCA_001073365.1_02184
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	25646	26398	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_41	753	-1	0.327	11	GGA/GAG/AGG	GENOMAD.131437.VV	3.651e-118	377	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	41	24	15008	15760	MSAATEIIKERVSDYELCTRFNTYYIQTRIALIESDIEDMYDRTTPSLCSDTVSESIYYESYSVENLAIAILEERQKLERYKRKSQRDLNTFYTVLGRFSTQEQKYIRNYIKTRSEAYMNVIERFKIELHDYIQTNRKTRNKGIEHDYSYISDKHQKEQVYPHKLTLNQEKALREKEDGITEKNMNIDEFVAKLNELDEKAFKEFIYNRNENNINFEKVIILLQTIPKRLPEKEIAKPYNYIKAVGLKTN	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0024	shell	direct	high	753	1.0	GCA_001073365.1_02185
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	26408	26740	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_42	333	-1	0.291	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	42	25	15770	16102	MTIIIENKLTNDHIKVLNVLRNTKHEIITKQNIFNQLNMEFNRNNDRWLRNTINSLVVDYGYPIGYSYKKDARGYFMVKSEEQKELALRSIKRHIEGSLKRYEALKKTEI	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0025	shell	direct	high	333	1.0	GCA_001073365.1_02186
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	27107	27595	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_43	489	-1	0.352	11	GGA/GAG/AGG	GENOMAD.223476.VP	3.89e-91	294	0	0	0	1246	Caudoviricetes	NA	NA	PF16560	Putative mobile pathogenicity island	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	43	26	16469	16957	MYAHVLIKDCEVRKTFEIASEKHAEKLIESIEGHYTGYDLHDGTHDTISDMMASFMFDNEYFMYGLETFAESNNSDMFDYMSRDFNIDELEGVQSSNADVIGNMEALYQLATGINEPAPELVEGLKIITEFIQNEQANEVDSKALIKRLNELKQSYYDGVKA	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0026	shell	direct	high	489	1.0	GCA_001073365.1_02187
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	27624	27752	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_44	129	-1	0.271	11	GGA/GAG/AGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	44	27	16986	17114	MNVEIIANEFETRAATLLRYFTGLCESSYKVPFAFKIYNDPF	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0027	shell	direct	high	129	1.0	GCA_001073365.1_02188
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	27749	28054	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_45	306	-1	0.314	11	None	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	45	28	17111	17416	MNGRSRITVLETHYEFNIDDELRKLGLLVGISEEIYYCSISRISTLYLENFGTKWVAWRETYDLQNNKRVSYRTIADGSFELVAARTKNYLNYIKRKQGIK	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0028	shell	direct	high	306	1.0	GCA_001073365.1_02189
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	28005	28826	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_46	822	-1	0.326	11	GGAG/GAGG	GENOMAD.167439.VP	1.451e-148	466	0	0	0	1246	Caudoviricetes	NA	NA	PF09250	Bifunctional DNA primase/polymerase, N-terminal	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	46	29	17367	18188	MKMYNAAKYLLSKDVQVVPLNDNKKPTVSFKNVTIDDEFIDNNFLAYANTNVLGVLTRGLWCIDIDINHVNGESGFDSLKDIPYYDEFVSNAQNTLVQTTASGGKHVIFKKRDGVEYAQKIGYLPSVDIKAHDNNYFVLAGSKTAKGLYTSNKKPVIVYDGEFEDRIFSKRGNYLQQTMEKFSVKSVLPNHNFNHLQHTGKGGLGKEAYNRVINGESIERNNDVYKAISYALQCNVDIEPLKVIIGDVKANGDVYTLDEWEKSYNSARNSLRI	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0029	shell	direct	high	822	1.0	GCA_001073365.1_02190
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	28997	30610	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_47	1614	-1	0.284	11	GGA/GAG/AGG	GENOMAD.096907.VV	2.905e-40	161	0	0	0	1246	Caudoviricetes	NA	NA	TIGR01613;COG3378	phage/plasmid primase, P4 family, C-terminal domain	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	47	30	18359	19972	MDEVSLYKKHYQFHSKLDNVDTPNLSRIKEISKRIYFAAITTEKQIFNNKGSVYHQTKDEFAGDYINNLTLDYTIKPREIGAVYGTISVKTTVENGEEKKEAHFKPSKTNSYAKFIIDLITEKVIYSKELDSFIKLKNNQYEIIDNTNFSLEYPVDNKYHINDFLDVMLEVYKEYFINNYQYNIYPYAIAGNDWIYNCKELEFVDKKITSNDYYIIKYDVDKKNINTNLAQQFFDLVSDNERSKNNLMLVHAYTMYRKMKLIQAEKWFLIKDFGRSGKGLFMETFEKLLNVNKVNFDSLLSSGFEAANEWLNFYGADIAHANETGEINKGMMRILRKIATGENISGRGIQRNNVKFKNNAVLILDTNESVDTGEITANRTRTVKIAFKDRPENETDEERYKVFKPFWDFVKPNGKNSVNAAVSFLILSLEYLKQIGREFKFNNVTLKFYYNEDELTDTQILMLKVLAKQDFIFSGDEILQKTIEEDYKSLRYKKAKEDMKKIGVAINKQEWIEGQNTKVHKVKNQELFNMALALIET	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0030	shell	direct	high	1614	1.0	GCA_001073365.1_02191
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	30694	30999	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_48	306	-1	0.304	11	AGGAG	GENOMAD.225715.VP	3.932e-45	158	0	0	0	1246	Caudoviricetes	NA	NA	PF07342	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	48	31	20056	20361	MEWELRNLFDDLEVVQDKINDVVTSFVWFDDEYFTHEPNHMLTKKEIYTHGLKYHEHRIKNTQVIDLMLMYMRDFDDIMKKIREIEKASSENFGEESDNAE	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0031	cloud	direct	high	306	1.0	GCA_001073365.1_02192
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	31014	31220	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_49	207	-1	0.261	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	49	32	20376	20582	MAAKLDVNKQNIMHAINWIIKNEEEIIFESQSQLSFFSREDLEKIDYCKRTLESLIEAKEIYNKQKIS	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0032	shell	direct	high	207	1.0	GCA_001073365.1_02193
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	31225	31629	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_50	405	-1	0.299	11	GGA/GAG/AGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	50	33	20587	20991	MEQEQKYRLSKVVQILEKVLYEKDKNIFLSAKDKFHSITDYRYDDTVFYEHILKLVHKELFNILAELDFEDEAFSILDEVTMTLSDVMNEDKEIYYYSVTDNTGEHEHTTDKEGHVIGILEWALDYIVGNIEVE	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0033	shell	direct	high	405	1.0	GCA_001073365.1_02194
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	31633	31833	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_51	201	-1	0.313	11	AGGAG	GENOMAD.201991.VV	9.831e-35	126	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	51	34	20995	21195	MKQQVVITKSVVGWFNVKDVKGNLLLNIAPDVFKKHFPEVSPNIAIACMELELNRILELKDKKVSV	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0034	shell	direct	high	201	1.0	GCA_001073365.1_02195
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	31846	32064	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_52	219	-1	0.338	11	AGGAG	GENOMAD.215846.VP	1.206e-06	46	0	0	0	1246	Caudoviricetes	NA	NA	PF13693;COG5606;TIGR02612;K18830	Predicted DNA-binding protein, XRE-type HTH domain	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	52	35	21208	21426	MGSVNYPMLYIARKEKGDTQRKVAQKLGISPQRYQLKESGKAHFTLPEAKILSEMYGMSIDDLFSKNIKVGS	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0035	shell	direct	high	219	1.0	GCA_001073365.1_02196
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	32100	32360	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_53	261	-1	0.249	11	None	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	53	36	21462	21722	MRKRKLYISSIKFQGGAWMQNKVGNYRRYIGLTQNQMANNLEISVTAYRNKEKGTTPFKDSEKITIKNKLIENGLKDITIDDIFFN	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0036	cloud	direct	moderate	207	0.793	GCA_001073365.1_02197
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	32526	33110	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_54	585	1	0.267	11	AGGA	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	54	37	21888	22472	MEEFGKKFKNTAHKSIVSKWEKGLTKPSNERLKEIADLGNVSINQLLYGDFLGELENIASEEVTNTLNDNNLEIDDYEFKSLMSSVSRLIVTFYERGEENFDINLFKRLLRHYIQLDLDLGNRDLDSLTYFAFQRTINAQELVVDYYEDSKAKKFLENKEIKEFLFTISDKYDELMRYIDDYREKYNLERISEE	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0037	cloud	direct	high	585	1.0	GCA_001073365.1_02198
GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	genomad	CDS	33116	34204	GCA_001073365.1	JVCA01000039.1	GCA_001073365.1|JVCA01000039.1	GCA_001073365.1_JVCA01000039.1	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204_55	1089	1	0.325	11	GGA/GAG/AGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad	GCA_001073365.1|JVCA01000039.1	55	38	22478	23566	MNHNLNLSHNIHKDAKRGTYYFRITYYDKTNKRKEIKRSGFKQRKEAVKKCNEIMDELEGIGQINKLPFDRLAHEYLDWYSARRKASSVKSLKTHLNNHLIPHFNTIDVFNLTTQDVMKFQNKKLKEGHSGEYLKKMHVFLVSLLNHAMKYHDLTSNVASLVGNFEIESNKRLNYWTLDQFNQFYEVLPTIEQKLFFKLLFYSGARKGEIRALTWQDINFDDNYIHINKTDYHGDVTVPKTKAAIRDIYLPTHMMDDLKEYLIWYQNNNIYKSEYVLFGTFFKAFSESKIDRWFTNAYKLLPTDFPKIVIHEIRHSHASLLINHGASLMVIAQRLGHSSIEEVSTRYGHLYPSTQKEIVKYL	GCA_001073365.1|JVCA01000039.1|provirus_10639_34204	GCA_001073365.1|JVCA01000039.1@region_10639_34204@tool_genomad_CDS_0038	shell	direct	high	1089	1.0	GCA_001073365.1_02199