core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1508488	1508649	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	1	162	GCA_001296205_1_1_1469	GCA_001296205_1_1_1469	-	1908201	.	.	hypothetical protein	MSVKEQQTVVGGAVWVCLTCGYISHDHIFVETAKATAYDHERKYRGHKTIVRA*	.	hypothetical_protein	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1508943	1509443	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	456	956	GCA_001296205_1_1_1470	GCA_001296205_1_1_1470	-	1908201	.	PF14367.6	Domain of unknown function (DUF4411)	MYLLDSNIYINFYDRYYRNEFFPTFWLNFVSILNSNVKIPDIVVSENYQDPWFRDWLDDKYEKDLIDHKSYAREWSEVIQYIQDSPLYKDTALLSEKGWANEKIADPWLIAIAKRENYTIVTDEVKNINLSDKNPSKNAKIPDVCEKFKIRCISMNQFFAEIGLSI*	hhsuite_tools	nonviral_gene	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0002	shell	direct	high	500	0.998	GCA_001296205.1_01491
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1509444	1510553	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	957	2066	GCA_001296205_1_1_1471	GCA_001296205_1_1_1471	-	1908201	.	PDB:3DTE_A	IrrE-protein	MTQRIKVNNKVLSAYIHNSNTPIELIRKRLPNIDKFLSGELDPTFNQLSILSKLINVPTGLLVLKERITPISLNIDFRTLNSQYLSDISPELKATILEMQEKQDFLRDTVENECYFVGMFDFDSKHEEVIEKARTLLGAEITKNRFNHYRKVLGNLGIYIFLNGKYKDNTHRPLNIKEFRGFVLSDKKAPIIFINQLDSKAGQLFTLIHEFIHVLYGDSDLLESEELSKRNKKEAIINSVTAEILAPKSLIIDLFDEEKNIKDNLEIISKKTEVSKFVALRRLYDLSMISKDTYQSINYELEEEFKQIQKLRKPSNDGNYSNNLRFRIDNNFFKYVNNAVQQNKITYTDAFNIVGVGYKGYKILSKGEG*	common_virus_hmm	common_virus	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0003	shell	direct	high	1109	0.999	GCA_001296205.1_01492
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1511423	1512202	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	2936	3715	GCA_001296205_1_1_1472	GCA_001296205_1_1_1472	-	1908201	.	COG1808	Uncharacterized membrane protein  [Function unknown]. 	MLVSTLYFWISPLSYASSELIARTSPTIWDVLIAIAGGIAGVIGSRKKEANNIVPGVAIATALMLPICTAGYGLANRNVRFLFGALYLFLINCVFIMLTNIVGTRILMRKSPLSSFKELNIKMKIGLISLIVLLVLPASYSAVTLTIDQARKEGIKQFVGKEFANHTVINQVYKSRNNELVLTVVGDPISEELETIRQKQASYGIQSVQLKVNQVHNSTKLDSETTKEFYENIDKYIDQKLSEKDSQNDLVKENEADKD*	mmseqs_cdd	nonviral_gene	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0004	shell	direct	moderate	723	0.927	GCA_001296205.1_01493
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1512224	1512469	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	3737	3982	GCA_001296205_1_1_1473	GCA_001296205_1_1_1473	-	1908201	.	COG1808	Uncharacterized membrane protein  [Function unknown]. 	MTGNYSTREYREKLYDDLHVRLRDTVILMCAIFIASIGLNMNSTAVIIGAMLISPLMTPIVGLGFGLAIFDTRLIKQSLEV*	mmseqs_cdd	nonviral_gene	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0005	cloud	direct	high	245	0.996	GCA_001296205.1_01494
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1512952	1513410	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	4465	4923	GCA_001296205_1_1_1474	GCA_001296205_1_1_1474	+	1908201	.	PFAM:PF01610.16	Transposase	MLRSHRKSHKHKALKRYWKLIQQESRKLSDKRFYLPTFRSHLTNKEILENLLAYSQELREHYDLYQLLLFHFQEKQADHLFELIEETISCVNPIFQTVFKTFLKDKGKIINALEPPYSNAKLEATNNLIKIIKRNAFGFRNFKTSKLESSLH*	common_virus_hmm	common_virus	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0006	.	unmatched_CDS	none	0	0	.
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1513546	1515609	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	5059	7122	GCA_001296205_1_1_1475	GCA_001296205_1_1_1475	-	1908201	.	cd07550	P-type heavy metal-transporting ATPase; uncharacterized subfamily. Uncharacterized subfamily of the heavy metal-transporting ATPases (Type IB ATPases) which transport heavy metal ions (Cu(+), Cu(2+), Zn(2+), Cd(2+), Co(2+), etc.) across biological membranes. The characteristic N-terminal heavy metal associated (HMA) domain of this group is essential for the binding of metal ions. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	MSFKVLHRGYQHIRLSSSFSLTLDIQAYLRSLARDEKGIDSIQFYMDQQHFTLRMREGFSVLENAEAFLKRIDKGKVSDLMTLPIRREESAYSIVSGAAIKRCLFRSFVPYPIRYIWTCYQALGYVKEAYQTLARKELTMEVLDCSAILLSLFMNQSKTASNIMFMLDLGNHLDQWSLKKTATDLEQSLLAKESDVFLVQGDMVISIKSSDVQVGDVLVVSQGNEILFDGQVVSGLGMVNESSLTGESFPVEKKEGDSVCANTVLETGELRIRVTDNQINSRILQLINLMKKSEESKKTKQRHFIRMADKVVKYNFLGAGLTYLLTGSFSKAISFLLVDFSCALKISTPVAYLTAIKEGLNREMVIKDGDVLEKYLEVDTFLFDKTGTITTSYPLVEKVLPFGDYTEKDILRISACLEEHIYHPIANAIVKQAEIEGIEHEEMHGKLQYVASKGIKSQIDGQSVVIGNYVLMQDEQVRISSEQLALIEQYKTHYNLLFLAYKKELIGMFCIHTPLRSEAKAALKKLKRQGKKLILATGDTLARTEELVKDLPFDNVYTDLKPDGKFQLVQELQKAGRTILMVGDGLNDSAALTLADIGVVMNESADISKQMSDILLLDNRLDFFEELNSLSESLQKLIQRNIQETVVINGSLIGFGLLNWLSPSNLSTLHNLTTLRIVLRSLSIKSR*	mmseqs_cdd	nonviral_gene	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0007	shell	direct	high	2063	1.0	GCA_001296205.1_01495
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1515611	1515889	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	7124	7402	GCA_001296205_1_1_1476	GCA_001296205_1_1_1476	-	1908201	.	pfam19605	Family of unknown function (DUF6110). This family of proteins is functionally uncharacterized. This family of proteins is found primarily in Firmicute bacteria. Proteins in this family are typically between 88 and 109 amino acids in length.	MLKEVLNVAKVAKKSSLFLGGVAFGTLGLKVLASKEAKKAYSKALAKGYKLKDGLDASVSVVKQHGDDVLQDAKYLYEQEKKEEQLDSLIGE*	mmseqs_cdd	nonviral_gene	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0008	shell	direct	high	278	0.996	GCA_001296205.1_01496
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1516070	1516651	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	7583	8164	GCA_001296205_1_1_1477	GCA_001296205_1_1_1477	-	1908201	.	PFAM:PF00872.17	Transposase,-Mutator-family	MPQENNASWSTLLDKLQNQGIQQVSLVVTDGFKGLEQIISQAYPLAKQQCCLIHISRNLASKVKRADRAVILGQFKMIYRAENLEMAVQALEDFLAEWKPKYRKVMESLEKTDNLLTFYQFPYQIWHSMYSTNLIESLNKEIKHQTKKKVLFPNEEALERYLVTLFEDYNFKQSQRIHKGFGQCSDTLESLFD*	common_virus_hmm	common_virus	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0009	shell	direct	high	581	0.998	GCA_001296205.1_01497
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1517010	1517510	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	8523	9023	GCA_001296205_1_1_1478	GCA_001296205_1_1_1478	-	1908201	.	.	hypothetical protein	MELYITEALIKAGIELGTLTFKGTTTLVNSKIQSLKEERNADKLRNTYDEIVNELLSEREQAIRIAQAYKEEYEKVHIDDKDIEYLHNTLERVISLLSSFTSVEDGKEDSMKQLVALLNKDTLKTMQLLGFNYKEAIGEPLTEVCSNAIRNKLGGLSSKKNVRNKK*	.	hypothetical_protein	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0010	shell	direct	high	500	0.998	GCA_001296205.1_01498
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1517648	1517836	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	9161	9349	GCA_001296205_1_1_1479	GCA_001296205_1_1_1479	+	1908201	.	.	hypothetical protein	MTLDVNKEELTILGIPFDNFSDFDTVWYAIGSSMIENYEPTVQDVIDLKAYVINRRKELNIG*	.	hypothetical_protein	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0011	shell	direct	high	188	0.995	GCA_001296205.1_01499
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1517829	1518440	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	9342	9953	GCA_001296205_1_1_1480	GCA_001296205_1_1_1480	+	1908201	.	COG2184	Fido, protein-threonine AMPylation domain [Signal transduction mechanisms]. 	MVKNQYKGYEYIDPNHQYTYPNSTVLINKQNITNIKKAYRNEHLFVTRRLADLRLKTIEVYSISDILAIHKYLFQDVYAWAGQYREVNISKSGNPFMPIQSFNTAKTYIDYLIHTYYQTANSKDEIIIQLAKILDNLNYFHPFREGNGRTQREVIRSLALSKGYSAQIRVEQDDEVYNLYMDGTVYGDLGKLEGLLSKILEKL*	mmseqs_cdd	nonviral_gene	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0012	shell	direct	high	611	0.998	GCA_001296205.1_01500
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1518642	1520198	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	10155	11711	GCA_001296205_1_1_1481	GCA_001296205_1_1_1481	-	1908201	.	COG1132	ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]. 	MLESILSITLPYLSKLLLDEVIIDNHYSLLSIIIISFAVIIVLQLLLGSLISRGSAKIETDISFKLRDNIIKKCLNLKIINASQRSNIQTVLIQDTESYATNLVNIFYTIFSNSIRVIGCLMLVFYINPLLSSICVFFLFFYIIWIIFIGEKIKSLTNKIQLSKEKIIQTSDNILYNILSIRIYNLFSNSYPRYYKSIENNADFVKKTRNYTNYISIVSAIIISIATFIPLFVGVGLIKSSVLTVGDLVAFNAYTNMLFGPITLLIGTISTIKTTKIYENRIIDLLSYLKQFDVGKKGPLKNNFTNNFSLKVRGGEIYGGEKLLIKNIDFTCHSGDVVQIVGDNGCGKTLFLQTVMRVVDSNGDIFLNDKLISNREIEDINENIVYVSNNLEFVEGSLSDNIFGDISIDEILDLVCLTERLLKVGDINSLDMETIQRTFSSGEIQKLKIARALMKSPKVLLLDEMFSHISQDDSDVILNGIRNKLPHTIVILVEHHYHSKYISMVYRIKNLHLVKELT*	mmseqs_cdd	nonviral_gene	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0013	shell	direct	high	1556	0.999	GCA_001296205.1_01501
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1520276	1521067	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	11789	12580	GCA_001296205_1_1_1482	GCA_001296205_1_1_1482	-	1908201	.	.	hypothetical protein	MEKNKCQYYLKNCPYLRSLTLSSIIISIFYAYVPLIIIYNWTNYKFMLNLVLLSIAAEIIRYYLISKFSISILTCTRNMYRFNNYKNQLNKVIDFGEKIDLISYNLINIIFGVIRYIPVIIVSILILFQRADSIKFFILVSMIVLVIELLIYGYDKKFNKLSEKYLLTKNWVYSKLSDQGQLDAVDTKKLQYLEKQIILYSNLRGILVNGRLLFVLIFTLYEFINNQNITFLMYSIYFFYSVDKLYNILPNIRKVSALILILE*	.	hypothetical_protein	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0014	cloud	direct	moderate	558	0.705	GCA_001296205.1_01502
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1521037	1522083	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	12550	13596	GCA_001296205_1_1_1483	GCA_001296205_1_1_1483	-	1908201	.	TIGR04078	peptide modification radical SAM enzyme, YydG family. Members of this radical SAM protein family for peptide modification occur only in the context of members of family TIGR04077, which average about 50 amino acids in length. In Bacillus subtilis, this protein (YydG) appears to act on its cognate target peptide (YydF) prior to its export, and result in the creation of a signaling molecule that induces the LiaRS two-component system. [Regulatory functions, Protein interactions]	MVISVVDPKSIGILTTMKCTAACQECCFECSPNRKERITFTEIKKIIDSIVIAFPTIKVVAWTGGECTLLGDDLINGISYAKGKGILSRIVSNGWWATSDEKAFMLLKKLKEAGLDEVNISTGDNHQEFVPEDIAIRAAVTAAELGISTIISVEKRGNAKFKKEDIFKNKIFQKFADKNINTDLLKIIDPVWVSFHSDNIYDYGELNLSNNLGGCDSIFETLSVSKNNEVALCCGLSLDYIPSLVFDDIQSMCDKPENTRLKFYNTFNDFLKIWIYVEGPYKILQKVQKWDSNIEVPNFIHQCLYCSYLYNNIDVQKVISEHYKEVQNKVMEKFYNKAKWKKINVNII*	mmseqs_cdd	nonviral_gene	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0015	cloud	direct	high	1046	0.999	GCA_001296205.1_01503
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1522143	1522682	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	13656	14195	GCA_001296205_1_1_1484	GCA_001296205_1_1_1484	-	1908201	.	.	hypothetical protein	MKSIKRNPNARIFDKSNITEFELPLLTNKENSQQQYKNADLDHSTDYDYNKFFLDLLNDEKLKQIADSQDKKIFLKYISDEFQSAFPNYQDEFGDIAIQRVCTRDWCTASYALFVVVAVVAVNITVAAVDTTVPFRNVEEENVFLNGTITLATVLGNDNFASNVRSYIGTELSQVGIEL*	.	hypothetical_protein	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0016	cloud	direct	high	539	0.998	GCA_001296205.1_01504
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1522684	1523223	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	14197	14736	GCA_001296205_1_1_1485	GCA_001296205_1_1_1485	-	1908201	.	PF13630.6	SdpI/YhfL protein family	MKNKKFNKLLMIISFIAFLITYYLTSYQYSSIVGLVYTLLITIQVLVFFNNNVKNNLHWLLTLAFAVIMVLSVVNSSTVIDTKLSLFLLCSVVIFIGNLCSLIPYNPFIGIRIFSTRNDEGNWRATHNILADLSIPISCLILFLSNFLNLNTVVTISFIIWLILPIIYSIWIYPKKGGN*	hhsuite_tools	hypothetical_protein	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0017	shell	direct	high	539	0.998	GCA_001296205.1_01505
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1523371	1523844	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	14884	15357	GCA_001296205_1_1_1486	GCA_001296205_1_1_1486	-	1908201	.	.	hypothetical protein	MSYANDSIFKIIEILGSLTKATPLIGDTGEVLYRSKSPFDDKLYSKEEIKGKETNYERAVTTEFDEILKALNDLKNSQLFYDLMYLTRGPQKFTADGDPLYVDPRHPDGPYSTSFDPGDQYAYGKSPLQLLLENKNELERLNDKLYGEKTGNNFYLR*	.	hypothetical_protein	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0018	cloud	direct	high	473	0.998	GCA_001296205.1_01506
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1523913	1524158	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	15426	15671	GCA_001296205_1_1_1487	GCA_001296205_1_1_1487	+	1908201	.	.	hypothetical protein	MQDANTIKALKELNISVEELKAITLEIHDNLDKITKLAEDDGLLDKTVELVNPQIRLMWNMARNTWGGVKLVASDLKVIGD*	.	hypothetical_protein	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0019	shell	direct	high	246	1.0	GCA_001296205.1_01507
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1524161	1525189	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	15674	16702	GCA_001296205_1_1_1488	GCA_001296205_1_1_1488	+	1908201	.	PFAM:PF02486.18	Replication-initiation-factor	MDNSVRIDYFAVTVKDVPPEEVLEEILLIPQDKFALNVWGINKYQRHYACSDIKVYFNQALDKMGVYLELKGQGCRQYEEFLNGNENNWVALVNRLYQYQVNFTRIDIANDIYDKALSVQTLYAYCKRGLCITRAQHVDYYERSILETGERVGETVTIGARGSQQWCVYNKLMEQRGKGKVVDNTNSWVRAELRCWQGKANIIAQQIALKRPLAAIYFEAINGHYRFVRPNDKDSNKRRRPPVKWWQDYLQTEIKTRLSIERTKPTLKQSEQWTEKQVSKTLAKLYVAKYEATTLEGADQYLQSLLKLGLSKFTSSDEKEIDQYVREYQSPNTWGMQKDDLP*	rep_hall_hmm	common_virus	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0020	shell	direct	high	1028	0.999	GCA_001296205.1_01508
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1525248	1525508	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	16761	17021	GCA_001296205_1_1_1489	GCA_001296205_1_1_1489	+	1908201	.	PFAM:PF07471.11	DNA-packaging-protein	MQVILPDEQIHQLQLLISQLIENEIKNKLDSNNVESPFLNKQQACKYLGIDNNTLDSWIKKGLPVIRVGKTVRFDRAELNHWLQNQ*	hallmark_hmm	common_virus	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0021	shell	direct	high	260	0.996	GCA_001296205.1_01509
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1525580	1526494	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	17093	18007	GCA_001296205_1_1_1490	GCA_001296205_1_1_1490	+	1908201	.	PDB:1Z19_B	Integrase	MSITKTKNGTYRLRIYIPEEVKSSLGIDKKVIEKRFKLRSEAKKYELELQNRIDKILSGDATSLETNGSILFSDFYHNIWWESYKVGQTTSTTKPPSQATIDGTEIVFRKHILPLLGNYSIDFLNQNKQVVLNLLTQKAEEYANFKVIRSYVNSIFDWAEELEYIETNRLSRTISRIKATKKIKLQEAKNDEDLYLSQSELQAWFTVFEEDLENDKLLFKDYVLFYTTFFLGDRKSESYALQWKHINIKKQEIQLVKALDKYKNPKSTKGNKKTTFHIPIELADLLRAWKKQQKLELGKRRLSI*	common_virus_hmm	common_virus	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0022	shell	direct	high	914	0.999	GCA_001296205.1_01510
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1526439	1526795	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	17952	18308	GCA_001296205_1_1_1491	GCA_001296205_1_1_1491	+	1908201	.	PDB:1Z19_B	Integrase	MLGKSNKNWSWENDDCQSDEQYVFTYIDTKGNVNSPLHADYLNNKMKSVERRHKELTHATPHKLRHTGATLAKQFGTSLEDISEALTHSDTLTTKTYVNTSNVIPMAVGEIAYRNLKK*	common_virus_hmm	common_virus	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0023	shell	direct	high	356	0.997	GCA_001296205.1_01511
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1527348	1530827	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	18861	22340	GCA_001296205_1_1_1492	GCA_001296205_1_1_1492	-	1908201	.	.	hypothetical protein	MNNSFLLEYDIESLSKVIYSIASWFPNRRFLGIVDKLNRDFINNESKILGTTKIDSYSKFVDFYKKVIEYYTPEYPKEDFPIDTGNVRFYSNDRFHKIFIGNGNEDTYETSFVIESLVHDFKQFKEIWYEILEYEDLIISYLEPFKSEFTQEDFECPPESYFNFIYQNYELFCDNKLAQYFKTFKSNNADLYPLFTPVNNFPIFLPVMKDCFMEIIESEIEESKFEESIWLSFWRRLNCNFTKFFEREGNSFYNLSLINKEAKEKIDLENTLAFLNEDRLIVLEPSQNKISEHLKKGIIDNTYQIAGLCQDGEVRGFEFKSQSNIIFVGVDTKSISPNITKTFLFGDDDEYVLNASSIIGIINNANSIKEIVDFFIAYNNNQDRIMSFSNEDALFRMWQSSNQMINDGALNVTMAFLPYESVHYNMETFDKIVLNYPFEIGGEFYNIHGWKIVDREQTDLSLISKAHLGSIDIFSENHKKIIYRELHFILEDINIYDYEQIKSFNEIVLNALYHNKEAILSNYEKETMEINLVSKSVLDRNANSRCPIQETNYFNKIVFVKNSKYQITLLAPRWNKIFADNLSKSTLEFENTILINLLDGFLFKDRVLLFEKIKETDNEKRTSSLFEVRVEYFIQPHLEFSVPKNYSFKRVRKSIANIIKELGLEPGIYCESDIVAIVRCFRNKIREDLVSMMSLYNQYDLILKLQNILSLIIFNIDIHRRRLTTFSDNGNLQTVKLNKFREQTIDLREEARVYKPILEYLIEENLVTERDDDALIPSDDIVDELIAYGKYILDFQLLSDAYSYGASNWFQLEIEDNYVVDISETEKYLQFVDEMIEIKYKYGEYASRDKEIDNDIIGLVKKSFFQDTKVDFDSFICFLSIFSSNSHILKLKNQKLLTVKGNVVTGKIEDLAKYFEENSDYSIEIFYGVLKFLVIEKKKITTNGVIPIWEKKKRDNKFSAKPVIVNHNSIIFSPIILDRLAKDWIEGMMNFILPYDIGMQNTLNTINSWKKFYEQQIVKNLKDLFKDNRYVTYIDQELYKLDIKGNHPRNLGDYDLIVIDNKLKEILLFEVKYMRLSQTMKDSMGDQKEYFCGGKAKGLKFKRRVEYFEENLDVICRNIGLEERYSLKSYFITNKLIKSNFVEFPFEIISFNEFKSLNN*	.	hypothetical_protein	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0024	cloud	direct	high	3479	1.0	GCA_001296205.1_01513
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1531136	1532458	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	22649	23971	GCA_001296205_1_1_1493	GCA_001296205_1_1_1493	-	1908201	.	.	hypothetical protein	MIFKRTKKYFIDCASLRLDSKIKIINEERKSRASTEYYWYTGQEKKVNKKYKKLTNREISSSNSPLISLIRRGMVTSKNPYLYTPNSIEDVLNNCKLDEYGTKLGLVSNEKKKYIARNIMFKSYDEICFGDSSEHRKLTSFLSSIIILDILFESYDDNLWRIVLGYMPLNIEFEKIRLDVVDVQKVYGILFEEHYELFMTGIFRATEKVLNVSTLFWKFYEERVKNESKNINKIAFVDVYLNEFYNEILKKKIDKFINDGSYYGYKEKYIHENNTYQSLESIISIQQEMRLYQGDMESVEIRKKYGNKVWDDNLLNVLNKDNIDDVLGKYTDEYLDYEDIDAIYATYILELTEKLLHLMSSFQSFREENSHWQGNYLGYVKKYQYGNEILKYIQTGDKELLRPLIYESLQRGNNGFARERYFIKRHPDSYLAREIRNFYE*	.	hypothetical_protein	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0025	cloud	direct	high	1322	0.999	GCA_001296205.1_01514
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1532738	1533265	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	24251	24778	GCA_001296205_1_1_1494	GCA_001296205_1_1_1494	+	1908201	.	.	hypothetical protein	MTYKSVIEELYCKLLGIELKRILNEREMLQNQIGYETADGEVELLSETTVGQILKGKRNISFNASLAFQTSLDYKNPRELFFPSIEFELLLIENIISTILIDPTFENTFLKKLIAKKFSNVSKKEVSQIIEKNKEIFLDSLSSFISDFPEEETSHQIAEKLTYWLSELACLIPQI*	.	hypothetical_protein	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0026	cloud	direct	high	527	0.998	GCA_001296205.1_01515
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1533365	1533679	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	24878	25192	GCA_001296205_1_1_1495	GCA_001296205_1_1_1495	+	1908201	.	.	hypothetical protein	MKSRNRKGGYSVNTANEYINNKQGIHCLSTELEPQIKFEDGQPTGEIIAHKAWFSQKGLPPFTVKFEAEVELPSYMALVQFDNLQACEVGFNVYFKADNLKEVK*	.	hypothetical_protein	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0027	cloud	direct	high	314	0.997	GCA_001296205.1_01516
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1533679	1534755	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	25192	26268	GCA_001296205_1_1_1496	GCA_001296205_1_1_1496	+	1908201	.	PDB:2IUS_D	DNA-TRANSLOCASE-FTSK	MTNRELGQYLLQSLNMGLGSIMQGENSYSNSFTCKIMEEGFLFLPRLPASYIIDDELYQKIFLIANAALYPLFTLLKQNSAYFMALDTDDIHVQRGLFFPWKAGVSERLVIADLEEFTAKQKGNLIPIMKNLTLDYNKVTSMAIAGNSGSGKSYTLTYFLSMLKNISDLIIVDPKFDTPSRWARENGIAVLHPHKNRSKSDFVSEINENLSACLNLIQQRQEILYDKPDHPFEHLTIVIDEVLALSEGVNKTIKDSFFSLLSQIALLGRATKVHLFLVSQRFDHTSIPVSVREQLNVLIQIGNINKKTTQFLFPDLDPEGIVIPIGKGTGLIQIIDNEHPYQVLPLLCPTYYTKKGIL*	common_virus_hmm	common_virus	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0028	cloud	direct	high	1076	0.999	GCA_001296205.1_01517
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1534759	1535373	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	26272	26886	GCA_001296205_1_1_1497	GCA_001296205_1_1_1497	+	1908201	.	.	hypothetical protein	MKKTFFQKTYNLNANLIVLALFSFLFKIGINLLIQMLETTKLSGMQGLFTTILDKLTALEHYIQVLSFCLILVPALLVIIELVQRFLKDSLWNYFKSISQTSRMRQFLKQNEQSEPMNTIENQTVTRINPILKSFNHSVLGCTVDVRKETVTVLLAIPRTQQAQKLLKEMEDDIKEEISSRNPNYYFSSPHRKGNKLWFTGTKR*	.	hypothetical_protein	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0029	cloud	direct	high	614	0.998	GCA_001296205.1_01518
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1535505	1536092	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	27018	27605	GCA_001296205_1_1_1498	GCA_001296205_1_1_1498	+	1908201	.	PFAM:PF01719.16	Plasmid-like-replication-protein	MAKEKRSNKWAFLLYQESAPEHYLDVLENMHIPFVLSPWHDKDINKETGEFKKAHKHGALYFDSLKSYSQVSELLTKNLNTPAHVEPVMSPKGMYDYFTHAENPEKTLYDINQIETGCGFELDKFLISNNSDEFLSMVIDIIEEHNFTEFNNLVRYARKDNQQLLGLVMDKTYFFAKYLDSRRHSRYGKEDNECK*	rep_hall_hmm	common_virus	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0030	cloud	direct	high	587	0.998	GCA_001296205.1_01519
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1536083	1536346	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	27596	27859	GCA_001296205_1_1_1499	GCA_001296205_1_1_1499	+	1908201	.	PFAM:PF07471.11	DNA-packaging-protein	MQVILPDEQIHQIQLLLSNLIQKEIEQQLGQNSLNCPYLNKQQACEYLGISNNTLDFWIQKGLPYIKIGKTIRFHKDSIDRWLNSRN*	hallmark_hmm	common_virus	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0031	cloud	direct	high	263	0.996	GCA_001296205.1_01520
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1536412	1537629	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	27925	29142	GCA_001296205_1_1_1500	GCA_001296205_1_1_1500	+	1908201	.	PDB:1Z19_B	Integrase	MTISKTKNGTYRLKVYIPLEARMPLGIVNNNYYDKRFKTRKEARKAEIDLLTKLNQIEDNVFSGLGKEDILFSDFYNNIWWESYKAGQTTSTSKPPSRSTVANTKTCFEKHILPLLGNYTIQFLNQNKQVILNLMTSKANEYANFKSLRSYVISIFDWAEELEYIEANKVAKILRRIKATKKIQLAESKREEDLYLTHEQLQEWFSAFKEDLENDKISLKDYVLFYLTFFLGDRKSETYALQWKHIDFSKSQIQLIQALDRYGQVKSTKGNKKTIFSISNDLLQLLTSWKEQQKYELAKFGIISNPEQFVFTYIDTRGNINKPLHADYLNNKMKSIRKRHKELAHATPHKLRHTGATLAKQAGMSLEAISEALTHSDTGTTQIYVNTSNVVPMTVGEFALKSLKQ*	common_virus_hmm	common_virus	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0032	cloud	direct	high	1217	0.999	GCA_001296205.1_01521
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1537736	1538128	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	29249	29641	GCA_001296205_1_1_1501	GCA_001296205_1_1_1501	-	1908201	.	PRK00132	30S ribosomal protein S9; Reviewed	MSQAQYAGTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRLVINQPFAVTSTVGQYDVFVNVDGGGYAGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQFSKR*	mmseqs_cdd	nonviral_gene	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0033	persistent	direct	high	392	0.997	GCA_001296205.1_01522
GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote	cenote	CDS	1538148	1538594	GCA_001296205.1	CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205.1_CP012718.1	GCA_001296205.1|CP012718.1	GCA_001296205_1_1	GCA_001296205_1_1@C97	29661	30107	GCA_001296205_1_1_1502	GCA_001296205_1_1_1502	-	1908201	.	COG0102	Ribosomal protein L13 [Translation, ribosomal structure and biogenesis]. 	MNKTTYMAKPGEVERKWYVVDATDVPLGRLSAVVASVLRGKNKPTFTPHTDTGDFVIVINAEKVKLTGKKATDKVYYTHSMYPGGLKSITAGELRSKNAVRLIEKSVKGMLPHNTLGRAQGMKLKVFVGAEHTHVAQQPEVLDISGLI*	mmseqs_cdd	nonviral_gene	C97	30107	1508488	1538595	GCA_001296205.1|CP012718.1@region_1508489_1538595@tool_cenote_CDS_0034	persistent	direct	high	446	0.998	GCA_001296205.1_01523