core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	678	866	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	679	867	GCA_001337855_1_3_1	GCA_001337855_1_3_1	+	132830	.	.	hypothetical protein	MSVDIEAIRWLLDNATAYAISKNCGMSIQAVDKYKNGVSDIMNMRLKHAISMITYAQELKKQ*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0001	persistent	direct	high	188	0.995	GCA_001337855.1_00290
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	1213	1644	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	1214	1645	GCA_001337855_1_3_2	GCA_001337855_1_3_2	-	132830	.	COG5346	Uncharacterized membrane protein [Function unknown]. 	MDTENKDLIEVNNIVDEVERLPHEQRQVVLQKLEIYQGDLPHPDILKGYKELYPDAAQKIIDNGIAESQHRREMEDKYLSGNIASHKLGQLFGFLIALVVIIGGIYLIATDKQIAGSVLTGTTALGLIGLFTGNNQNKNKDKE*	mmseqs_cdd	nonviral_gene	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0002	persistent	direct	high	431	0.998	GCA_001337855.1_00291
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	1628	1834	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	1629	1835	GCA_001337855_1_3_3	GCA_001337855_1_3_3	-	132830	.	.	hypothetical protein	MLKNTKQPQYFKSFLLGMTAIVLPVFSFNQNISKVKADTVPDWKKVKSDYKKSTMGIQKEVMKFGYRE*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0003	persistent	direct	high	206	0.995	GCA_001337855.1_00292
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	2011	2967	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	2012	2968	GCA_001337855_1_3_4	GCA_001337855_1_3_4	-	132830	.	COG5263	Glucan-binding domain (YG repeat)  [Carbohydrate transport and metabolism]. 	MDIDTSRLRTGLPQVGYAPYRQVHAHSTGNRNSTAQNEADYHYRKNPELGFFSHVVGNGRVLQVGPVNNGAWDVGGDWNAESYAAVELIESHSTKEEFMTDYRLYIELLRNLADEAGLPKTLDTSSLEGIKTHEYCTNNQPDNHSDHVDPYPYLAKWGISREQFKQDIESGLTIEVGWKKNDTGYWYVHSDGSYPKDKFEKVNGTWYYFDGSGYMFADRWKKHTDGNWYWFDQSGEMATGWKKIAEKWYYFDVEGAMKTGWVKYKETWYYLDGKEGAMVSNAFVQSADGTGWYYLKPDGTLADKPEFTVEPDGLITTK*	mmseqs_cdd	nonviral_gene	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0004	persistent	direct	high	956	0.999	GCA_001337855.1_00293
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	2970	3299	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	2971	3300	GCA_001337855_1_3_5	GCA_001337855_1_3_5	-	132830	.	PFAM:PF09682.9	Phage-holin	MTQFNEFIIAFATGFLAVAVGSIVKMVKDYLLRKGGEKAVIIAEILAKNAVHAVEQVAAETGYKGDEKLEQARDKVRAELTKYKISMTDKDLDTFVESAVKQMNDAWRE*	common_virus_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0005	persistent	direct	high	329	0.997	GCA_001337855.1_00294
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	3314	3610	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	3315	3611	GCA_001337855_1_3_6	GCA_001337855_1_3_6	-	132830	.	.	hypothetical protein	MLGSREIVKRYIGDRLVWSSGPSLLLEVLNTRMWQYWGGYNIDIKGNDIKVAAIRYVQLNNSRLIRIQADMYNRGVIYLTGTNLREYIGTVNVKFYRE*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0006	shell	direct	high	296	0.997	GCA_001337855.1_00295
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	3640	4422	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	3641	4423	GCA_001337855_1_3_7	GCA_001337855_1_3_7	-	132830	.	6V8I_BM	Distal Tail Protein, gp58, Tail-Associated	MSNLENLARAIGEDVKAIKEDSELKDREVKKRLDTLESRPKVHPETLVTKAELEEKGYLTSHQDLSTYAQKWELYNDIPIKARISALENRPSFDTLTPTQRDSLKGDNGHSLNASVRIEGSYKNGSTSRLNLFADVFYDGEAVTSGYTLDYYYRGFGYTNWRSLRNQTPDSAGKFGTWSASQRSGGWFEVRIEVNYRGLRASAFTHLDNVNDGEQGRSGVPGQNIVNQNGSQALNYWAGTQEQYDAITTKDPHTIYDIFK*	hhsuite_tools	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0007	persistent	direct	high	782	0.999	GCA_001337855.1_00296
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	4428	4748	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	4429	4749	GCA_001337855_1_3_8	GCA_001337855_1_3_8	-	132830	.	PFAM:PF12789.6	tail-fiber-protein	MDTTKLTAFAQAVGEDNKKVNEELKTKVSTSDMNQAIAQAKSEVKAEILGEGTPENLDTLKEIAEKITSMGQDENSALLGKVTEVSGRVDQIANLDLVAIYNAAKA*	phrogs_hmm	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0008	persistent	direct	high	320	0.997	GCA_001337855.1_00297
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	4755	5231	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	4756	5232	GCA_001337855_1_3_9	GCA_001337855_1_3_9	-	132830	.	PFAM:PF14606.5	neck-protein	MVCNLNMTNLRQIDGGHLIKQGDLASTFGFALLDEDYQVISSLEGEEALISLTKEGYQWKKQVTVTGQGVSFHLDAILPIGSYRLEITAGGYVFPSDKSVHIKIVASDKELVTEEVHALKELDIAKEVEKQLAGRTVGESPVGQELPDLLFYYNLGKV*	phrogs_hmm	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0009	persistent	direct	high	476	0.998	GCA_001337855.1_00298
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	5247	5525	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	5248	5526	GCA_001337855_1_3_10	GCA_001337855_1_3_10	-	132830	.	PFAM:PF04531.12	holin	MTEIEHLLIRFLFSLIPVVVLYFSMKDRATKQENRMTAIEKDIENLLEFRMSANKRLDNHDEQNKAILVLAEQVKSLGEDVRELKALIQSKQ*	phrogs_hmm	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0010	persistent	direct	high	278	0.996	GCA_001337855.1_00299
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	5536	5688	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	5537	5689	GCA_001337855_1_3_11	GCA_001337855_1_3_11	-	132830	.	.	hypothetical protein	MSKITLDQAKIDMYINLLERGAVDFSWVHKRWKDRVRKELKRRGLSHLAN*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0011	persistent	direct	high	152	0.993	GCA_001337855.1_00300
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	5681	6214	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	5682	6215	GCA_001337855_1_3_12	GCA_001337855_1_3_12	-	132830	.	PF07104.11	Protein of unknown function (DUF1366)	MNYEVAINPYLKGGENVTVVAIKMENKGRYSYEQCELPGDHTQDSEDALIQAVLELVRTELDPTSAIVKNQEQLAKTTEALERANQLMDGMQKVNLQNAQDIEDILARLEELEAQGESDQEEAEEDTPQVTDTENQAEEAQPTPAVEDKKESEKEDDISETTNQESLSEDNGGSSNE*	hhsuite_tools	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0012	persistent	direct	high	533	0.998	GCA_001337855.1_00301
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	6211	6417	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	6212	6418	GCA_001337855_1_3_13	GCA_001337855_1_3_13	-	132830	.	.	hypothetical protein	MDNHTIDKLVAESLVDRLADIELNYAHLNVHHRLALAELQAFKAVLEYDPALKELFDETQAKMKGNKE*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0013	shell	direct	high	206	0.995	GCA_001337855.1_00302
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	6410	10990	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	6411	10991	GCA_001337855_1_3_14	GCA_001337855_1_3_14	-	132830	.	PDB:3GUD_A	Neck-appendage-protein	MIYLTEGNRPLNEAYNDEIVHFGNNTYQLTFRFPTSDPKWELLKEETFLTADDLHGEQDFYIFEVEKQQGYIQVYANQVISLLNNYIVSSIEVDRVSGTRVLSAFAGSITRANPFSFFSDIDDRHTLNIKDKNAMEVLAKDKHSILGQWGGDMVRNGYNLRLLKNGGSENESLFMYKKNLSSYQHKTSMKSLKTRITFKTTVKGEGENAVDHDYMVVIDSPLLGNYSQIYEDVVEVNDQDVTDEASLIAYGKQYFRTSMCDMLEDNLEISVVGQSDVAVQMFDVVSIYHEWYGLDVRKKITKYTYSPMAKRLKSIGFGTFQSSLANAIGGIVNDAVLNESRNLHQIFEERLKKEIANADRAFDAEFDKREKAITDAIELAKAKAEEVKQEVSDTINQRFNSFHDEPLRESRRKAEEALRQAGASSSLAQEAKRIGLDSVARLEAFKSQTRSAQTALSGDLNLLKQTVTNDISSKQRQLKTDISKQVQALGQIKNDLAGVRSSQARYEETTKGRLTALTNRMEGKANKSEVRQTAETLTSQIDRIQEESSTRISTMTSRFNQRADALDAGVRRLTEGLRTKADISSLNVTAENIRQSVRRLERDTQSQLNQKLSTAEFEVRAGSIRQEILNATKDKADKTLVVAEAGKLREEFSNMQVGGRNYYRDSEKIQQSRFGFVFDNLGPYLSKSDIGTTWTLSFDFKLDEVDGSFPFFLSHGGANGFGIEGQKKFTATREWQRFRLTGPVFFKEDAPSESKLQMTLFNSDLGYGGTIFIRRIKLEKGTLATDWSPALEDTNGLITQAKASFERTAQELRTDLSAVQAYVAQDGQRQESLQRYTREESARQARAVREQISRDYVGKSSYQEDVEGIHRRIEGVKTSANREITSQIASYRQSADGTFRDISSRITTYKQDMTRNIANLSHQLAGKVETTDFQRVKETSELYERILGNTENGIADKVARMAMTNQLFQVEVGKYSVSGPNLIKNSDFKNSTNKWVSTQNLGRLVKHSFYHNGQKDLMRLSNATKNKNFLSSHRFNLERNTDYVLNFRGFNNSALASYDVYILGRRAGESDGFTIFKKVVSSKKLSTSRCEDVSVTFNSGEMDNAYIRFENNGSSSGTADLYITEVDLYKGYKPRTWQPHPEDAVADANKKLEATQTKMTQLAGSWLVQNINSAGDLISGINLGANGHNRLSGKLTHITGETLIDRAVIKSAMVDKLKTANFESGSVTTAVLAAEAVTADKVKFDHAFIRKLIANDAFIGELTSKRIFATKIESVVNRSTFLEAYQGQIGGFTIGRFAQGRGRWISGVNQFSVGMGNGEGGSYNGENTAFWANWGYSWNSPGPNAWYVTTLGNMHCRNGANFHGRVDFSNSSRANFYGNTTFSRSPVFSNGIELGSKDVFGDGWNPKGGRNAVVWWNQVGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIESKKHEEIGLIAQEAETIVPRIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMENRHG*	hallmark_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0014	shell	direct	high	4580	1.0	GCA_001337855.1_00303
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	10987	11685	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	10988	11686	GCA_001337855_1_3_15	GCA_001337855_1_3_15	-	132830	.	PDB:2X8K_A	Distal-Tail-Protein	MFYMIINGFNTSTIPHCVVTDFGQVEAAKPRVVEDANLYGANGSYRVLDGGYESYERTFSFYIPKLLDVSTIVEKFQPKDNVLEFSYQLGSVFYADFIGATYSPHGMHAWKLELKLSMQPFRYQKSVEPLIFTASGNINNPGSVYSEPVIEIEGDGDISLTIGRTTMHLTVRRKVTIDCRHKKQNIYNADGAVQNTLRKRGGFFELAVGNNGLVFTGAVRKVTVRPNWRYIL*	hallmark_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0015	persistent	direct	high	698	0.999	GCA_001337855.1_00304
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	11685	15860	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	11686	15861	GCA_001337855_1_3_16	GCA_001337855_1_3_16	-	132830	.	PFAM:PF10145.8	minor-tail-protein	MASGTPLGQMYIELGLDVSKFSPTLTGAKNAVKYFQNNVRSLDSTLKGNEKNASLLQAKYKTLGQAIDSQRKVLDEMKKSFDKLEPGTAKFDKAAADIQRENAKLAVMEGQLRGVEKALQDVGRENSWSGKMDTLSENFAKGGEKLRAMGDAMKPVSAALLAGFTLSTKKAIDFESQMNTTKSLLADTIPTADELNSTTQKLGESSKNWAKQYGISTASINEGMQEIIKKGFDANQTIEAMPAILDAAKASGEDFNTVMNATTNILQQFGLSTQDTERVTNSLTFVANKTAAGFADMGAAMEYVGPVAKNVGMNLEETAAAVGLLSNNGIAGEKAGTALRGALTRLLKPSEQNANAMEKLGFSAEEFRSGAIKLPDILDRIKKNTEGMTDAQKSALIATAFGTEAQTAMNILVDQGGDALRNLANETKGATTYTKDLANELSKSSKNGVERFKSSLEVLQINIGQKLLPLLTPVIDKVNQFIDWLSKAPPAVQSLAVGIGGFLALGYPFLNFLGNGATALSILIKHAGKLGGLLKGGLGLAKLTERAGKLKGLLQGGLGLAKAGSEATVLAEGAGAAASSSSLLSGAIGALTNPIGLLVGGAALLAGGLVYLGYKKDEARIKAEEFGSQLSDTARKELRDFQSKVDDTSTAVANFGTHAGDAEKVSEAFRKLHEEVAAGAEKANQRMEELAKKLGFSDEEIAKMKVKNDQVVSNTDAMANQVSEIYKRHNGDASKFSQEEKEIVLNNQREMIKARIEMMELSGEQQKAALQALNGEIGSLNETQLKHTRDVLKKALDEENQLYKTSKDGLKQLLDAKRIDQETYNKKIQELETNHQQTMEALGTKYYQVMQNLDAKVKARTGQSWNYWEEAKKVLEEYGLSYEVIGQKAAEASQKMGDSHSILAKYTSDMSKETREANDAWSLLVGNIDENNNFVIKSNVKEVIGEATKSAEGWEQLQFIVKNANINSNARVTIAEALVESGKWSTMTLEEKQLIVQNQAGLQAIFDSENHLRIWNSMPAEVKQLLLENTDVMNKAEEASKALYNYDALTPKQKELLATDENFRKAVARSTDTLTTWNAITPFTKDLKLDPTNVLNNGQLSIDKIMAWNLSNPENKSLNAIDNTSEAVASAKASVNSPKQEKPIDLLAKDQTAGVRNETSAAINAIKQHNPVDILAKNSTSSTVSEVKSVVNSIQDKTVTISARDNASGVLAGIRSWITRVTGDFFTNVFASRHAHGTNYHPGGLAMVNDQRNSTYKELVTLPDGRSFIPEGRDVLLPLPKGAKVLRADKTKRLMREMGVPKYAAGVGIPSDAKFLREMEEAQAKIVVQTKGDTNSKDSDKVVSEIAILRASMEKILTAILEKPSDTYLDADKISMSVYQRQGAIYAREGM*	hallmark_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0016	shell	direct	high	4175	1.0	GCA_001337855.1_00305
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	15917	16147	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	15918	16148	GCA_001337855_1_3_17	GCA_001337855_1_3_17	-	132830	.	.	hypothetical protein	MSRKEKACRRYWFWFTIFILYLAFGLYCICTNFVDIFGMLLLSPFIFASLPLYAYLFLGMFIWAFMNMAMDDFYKE*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0017	shell	direct	high	230	0.996	GCA_001337855.1_00306
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	16211	16330	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	16212	16331	GCA_001337855_1_3_18	GCA_001337855_1_3_18	-	132830	.	.	hypothetical protein	MSIRDVMDTSWEDLMGVLGSLETSEQEEVLDLADFLESL*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0018	shell	direct	high	119	0.992	GCA_001337855.1_00307
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	16396	16689	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	16397	16690	GCA_001337855_1_3_19	GCA_001337855_1_3_19	-	132830	.	.	hypothetical protein	MAKVQFTIKNDKGEDVLKKSKEITTRDYRDYLVMNESLTSDLSEVEKLDKQLGFIASLFDDVTVEQLLEYTDFAKVISIFTAIYAHLVGDVDPKEKS*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0019	shell	direct	high	293	0.997	GCA_001337855.1_00308
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	16735	17331	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	16736	17332	GCA_001337855_1_3_20	GCA_001337855_1_3_20	-	132830	.	PFAM:PF04630.11	major-tail-protein	MTVKGTALIGLKSVTIRVHDGQTPTVGQNLFTLEGKDNEGATQTARVTGLSSDPVKTYGSNVAYHVSNRGVGDVKVEMGLLDVPLALYTNALGYGDDDGIYYFGADTVAKNVSILIESNTADGEPVYYGFYKGQLSMDAIDFETLKDKANELATTSVNFTATASSDVATKGRYGAIVYGSDAEKLKKLKGQLNITAAG*	hallmark_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0020	shell	direct	high	596	0.998	GCA_001337855.1_00309
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	17348	17728	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	17349	17729	GCA_001337855_1_3_21	GCA_001337855_1_3_21	-	132830	.	PFAM:PF05657.10	tail-component	MIKDKLTELYDALEEDESLSGISIKSFERPESLGDGETSIVIIPVGPPMQTAHGSNTSLAKTFLYQINVESTNRVECKELQGRIEKIMEEQGFYQTEGGLEQWIPDIKRYVDVRTYRGMSALYEKY*	hallmark_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0021	shell	direct	high	380	0.997	GCA_001337855.1_00310
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	17728	18126	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	17729	18127	GCA_001337855_1_3_22	GCA_001337855_1_3_22	-	132830	.	PFAM:PF04883.11	tail-component	MSSGANLKGFDDILRNIEVRLGEPVVRRKVNRALKETVEEFEPTFKRAMAVYADTGKTVGAVVHGNVTGTSSGVPMVKLGFKSPRWTLIHLNEFGYAKNGHPRGFGVMRRFFEASKPVFKSKVGMKLKQEFL*	hallmark_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0022	shell	direct	high	398	0.997	GCA_001337855.1_00311
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	18119	18508	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	18120	18509	GCA_001337855_1_3_23	GCA_001337855_1_3_23	-	132830	.	PDB:2KZ4_A	head-closure-knob	MKRSEGPSYRYKKPESQNGDLRTPLTFYTSKIKKGVDGRDVSYEKAFYTMGQTYSPSMKDVEIATGKAMKAKMTLKIRDPLTDYQPENRHFVEVGDIRLVGKKWQIIDVRPDFANRDFLIVLIGGGRDV*	hallmark_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0023	shell	direct	high	389	0.997	GCA_001337855.1_00312
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	18495	18683	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	18496	18684	GCA_001337855_1_3_24	GCA_001337855_1_3_24	-	132830	.	.	hypothetical protein	MIKVLKEFYDLKEGVLRQVGERFEATEERFAELKEHLPDYVELEKSSRSRSSKEVVSVNEEE*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0024	shell	direct	high	188	0.995	GCA_001337855.1_00313
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	18676	18966	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	18677	18967	GCA_001337855_1_3_25	GCA_001337855_1_3_25	-	132830	.	CDD:cd08054	Head-Tail-Connector-Protein	METEAKLHSLLIPFKERMRIFHSGEDANLSRMLESSQMVITRLVGSGNIHDHQIREFILERARYVYNDQVEFFYENFKADILALSLDKIEMEDSDD*	hallmark_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0025	shell	direct	high	290	0.997	GCA_001337855.1_00314
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	18980	20095	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	18981	20096	GCA_001337855_1_3_26	GCA_001337855_1_3_26	-	132830	.	PFAM:PF06673.10	Major-Capsid-protein	MMKLGNEFTTARQNFMNAVETGAPMEEQNKLYNEMIEALTDKLQDDAREAARKEIATMNPYDAQLTAEAREFFNNIEKLPPKGIEKLFPQETIDRIFEDMVAARPLLQHIGLRNAGIRLKFLKSSRTGQAVWGKIHGEIQGQLKQEFAEEEAIQSKLTAFVVIPKDSEKFGPAWLQSYVSIQITEAFAAALEAGYLNGDGDNKPIGLSRTLTGTAESEKVTYAEKQAQKKPLTFADSATVVKELTEVYKYHSTKADNTTPVAVEGNLVMVVNPADAWDVKKQYTSLNAQGVYVTAMPYNLILVESVAQASGKVTTFVKGRYDAFVGGGIEFGRFTETYALEDLNLYTAKQFAYGKAHDEKTAAVWTLSIAK*	hallmark_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0026	shell	direct	high	1115	0.999	GCA_001337855.1_00315
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	20114	20836	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	20115	20837	GCA_001337855_1_3_27	GCA_001337855_1_3_27	-	132830	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MTIIQIKGAIVSNDDRWFYDWLDMDATAPKDIVLPTTGEDVEVHINSGGGDVYAGSEIYTALRAYQGHVTVKIVGIAASAASVIAMAGDQVEISPTAQIMIHNVSAGVRGDHKALLHEAGVLEGFNKSIAYAYIDKTGKALDDLLDLMEGETWFDARSAVNHGFADKVMFESQEAPVLVASQTPVIPRDFIEKIRSAMTPDVELLADLVRDRLNNSLPIPEDKKKEDKTAEPVGLGRFPF*	common_virus_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0027	shell	direct	high	722	0.999	GCA_001337855.1_00316
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	20817	21965	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	20818	21966	GCA_001337855_1_3_28	GCA_001337855_1_3_28	-	132830	.	PFAM:PF04860.11	Portal-protein	MGFLNLFKRDAPDVGFDFEELERMLGCLQLKSLAIDKSAEFVARIFAKSEFRYMVENHHVTSDWDYILNVRPNKNESASEFWQKVIYRLLTKNEVLIVLSDDKQLLVADAFTRRRYALYDDTFEMVSVGDYTFQRKFAMSDVIFLQYNNNRLQEYVSDLFSDYEKLHTRLVEALARNNQIRGVLATKANGTFDEDKRKKLQRYADNLFKSFTSKTVAIVPTMDGVEYSELTNTVGTTNLSVEELKKLRRQFDDEVADILGLPTALMHGDMADLSNSQKMFNSYCYESLVKKVGDALNHAMVSSAGYANQKKFVIFGEGGLDKFALAENIDKLISSGAMTRNEVRLELGLEAVPGGDSFLITKNYQGENEIEKGGNEDDNHSD*	hallmark_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0028	shell	direct	high	1148	0.999	GCA_001337855.1_00317
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	22021	23661	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	22022	23662	GCA_001337855_1_3_29	GCA_001337855_1_3_29	-	132830	.	PFAM:PF03354.14	Large-Terminase	MISHPLVDDYIKMAENGEVVVNKERKLLFKIIKEKIYPRDDLYFDNDLIDKFIRFAEKNFFPLAKYQLFLTPFIFLFRKVDEEPHFDEYLYTLARGGGKNGFMSARSSFFISPIYPIRDYDVTITANSEKQGKVSFEEVYETIQRRGLEDHFYLTKMSITGRANNSVFSFRTNNPKTMDSARDGCLEFDEIHQFENDKAVKVQRSGLGKIAHVRTFYNGTNGYVREGFYDKLIEKSMQILNGEVDDFRLFPFICKLDSADEVDDMKNWPKANPMLDESTPYAKRLLARTKADYDDLELEPSGRQEFMTKRMNLPEADLEKDVTTRERLLACLRSPGIDLLGKSCVAGFDYASIRDFASVGLLFKNGDEFIWKQHSFARKAFLKAFKLKAPIQEWADRGLFTIVDGPSIDPRLLVEKLNEWSKFYQIELVCADGFRMDLLKPLLEEAGFEYEFLRNPGAIQSKVAPIIEDGFANERFVFENDNSMIWYTDNTYVKEDKDGNKRFLKKEPVRRKTDGFHALIAALYKRELVHESNVGEFLDMLEDWEF*	hallmark_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0029	shell	direct	high	1640	0.999	GCA_001337855.1_00318
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	23658	23996	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	23659	23997	GCA_001337855_1_3_30	GCA_001337855_1_3_30	-	132830	.	PFAM:PF05119.11	Small-Terminase	MEEYSEKNIKELENQLLSKIGYFSPRKKDAIQYEKVNRYLYLVRLLYELKAKLHEDGLVITVHNGQQRFQKANSLIKEINTTSNQLLAIERSFDFDVENSPVEKATSGSDLL*	hallmark_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0030	shell	direct	high	338	0.997	GCA_001337855.1_00319
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	24625	25167	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	24626	25168	GCA_001337855_1_3_31	GCA_001337855_1_3_31	-	132830	.	CDD:cd01192	site-specific-tyrosine-recombinase	MNIVEPIRDKDDIQAMKDYLREWNERNYILFLFGINSGLRVGDILKIRVKDVQGWYIKLKEQKTGKKKKIKMTKTLKREVREYIQNKPHHHFLFQSRVGKNKPLDRRTVDWILKVAASECGIENIGTHSMRKTFGYHYYKKTKDIAMLMSLFNHSSPAITLRYIGIRQDQQDKAMSNFGL*	common_virus_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0031	shell	direct	high	542	0.998	GCA_001337855.1_00320
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	25467	25895	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	25468	25896	GCA_001337855_1_3_32	GCA_001337855_1_3_32	-	132830	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MQIELLDIIDEKKTRKEAIKVLKKYSRLRRIAGEEYAPKITISYSLEPKSSSGQTSKQVESMVLRRVSAQQDLELIAKAINNLSDMEYTRILIERYCRKKRREDYSIYSELGYSSSEYYRILNKALLEFAESYQASNLLVYK*	mmseqs_cdd	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0032	persistent	direct	high	428	0.998	GCA_001337855.1_00321
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	25966	26196	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	25967	26197	GCA_001337855_1_3_33	GCA_001337855_1_3_33	-	132830	.	PDB:2FJR_A	Repressor-protein-CI	MKDKLNPRQASRFAFLLKQKRKERKLSQEKLAAKLGYSRYLIAKWEKEESVPNIYNVEDICTYFAFPADIILGSRA*	common_virus_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0033	shell	direct	high	230	0.996	GCA_001337855.1_00322
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	26186	26365	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	26187	26366	GCA_001337855_1_3_34	GCA_001337855_1_3_34	-	132830	.	PFAM:PF04936.11	host-nuclease-inhibitor	MSEYALYDGDTFITMGTLAEISKETGIAERMLKYYTFASTQKRHPNGRAVIKIEVDDEG*	phrogs_hmm	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0034	shell	direct	high	179	0.994	GCA_001337855.1_00323
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	26358	26582	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	26359	26583	GCA_001337855_1_3_35	GCA_001337855_1_3_35	-	132830	.	PFAM:PF11753.7	nucelotide-kinase	MTDNINKPSHYQGANGLEAIDVVHNFVGILSGASAFFWGNAIKYMLRFQKKNGLEDLKKARKNLDWLIEEMEHE*	common_virus_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0035	shell	direct	high	224	0.996	GCA_001337855.1_00324
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	26584	27108	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	26585	27109	GCA_001337855_1_3_36	GCA_001337855_1_3_36	-	132830	.	PFAM:PF13921.5	transcriptional-regulator,-D5-like	MAGRRWTEDEVDYLEWYVLSREEHDLTQACKFLDRSYQAVRSKLAKLQKYNPNLQFKPKWSDADDSYILKYYQRFSYKTLARILGRSEKAIRDRIRKLGKRKILDLTIFHKDVVSLANQGIAVKDIAQKLGLHYNQVYYCLNKHQIPYKKREFRNQSNNLAWRNLNDMIFMRRT*	phrogs_hmm	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0036	shell	direct	high	524	0.998	GCA_001337855.1_00325
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	27095	27274	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	27096	27275	GCA_001337855_1_3_37	GCA_001337855_1_3_37	-	132830	.	.	hypothetical protein	MPDVEWIMENCHMMRDNGIWAGEKQISYASPDGQYTYYVNKRKDGTYYLHGAYKHYGRT*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0037	shell	direct	high	179	0.994	GCA_001337855.1_00326
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	27267	27665	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	27268	27666	GCA_001337855_1_3_38	GCA_001337855_1_3_38	-	132830	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MTPKFRVWDSVEKKFVEHFFITDNGLICNMEKPTSDSKLLIPIEKSELILMQSTGLKDKNGKEIFEGDILEIQDEGEVLGNAKLTWDNEQAVFMIEAISVDDIAPFHEILSDESYSYRVVGNIYENKELLDA*	mmseqs_cdd	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0038	cloud	direct	high	398	0.997	GCA_001337855.1_00327
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	27662	28153	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	27663	28154	GCA_001337855_1_3_39	GCA_001337855_1_3_39	-	132830	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MNTLEKVKQWFIDRDLENGGRLDKQSLKLSEEFGELCAGYLKKNEKLTKDSIGDCAVVIVGLGLLSKVDLDSIFEESKNVRKNDIMTSFAYANTCISNIQTEQHLKLMTLRIKSLTLLIGHLKSISKSLGYDFEECFELAYQEIKDRKGRWIDGSFVKEEDLA*	phrogs_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0039	shell	direct	high	491	0.998	GCA_001337855.1_00328
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	28150	28410	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	28151	28411	GCA_001337855_1_3_40	GCA_001337855_1_3_40	-	132830	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MKRFIAIWILVSAGLNIWQMDRIRDLEEKKPLVIYKADNAGAEIFGKVVEKGRHGKLYTLTIRDYGIFVVTKDVYEKIRVGDEVLL*	mmseqs_cdd	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0040	persistent	direct	high	260	0.996	GCA_001337855.1_00329
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	28407	28568	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	28408	28569	GCA_001337855_1_3_41	GCA_001337855_1_3_41	-	132830	.	.	hypothetical protein	MSLTLNSTIRDLVLAIGEVIVGSDGKTTTAILEIPDQSFYLEIELKLKEEVTD*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0041	shell	direct	high	161	0.994	GCA_001337855.1_00330
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	28568	28873	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	28569	28874	GCA_001337855_1_3_42	GCA_001337855_1_3_42	-	132830	.	.	hypothetical protein	MKYKVTEYHSDFQEEQTGTCELCFGTAWVENGSITVEDENGTETEIYLTVWDWGDYDTIYIDNVVNFSAWLQEREVDPIVEETERWSWLHELVEKYNEELE*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0042	shell	direct	high	305	0.997	GCA_001337855.1_00331
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	28863	29054	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	28864	29055	GCA_001337855_1_3_43	GCA_001337855_1_3_43	-	132830	.	.	hypothetical protein	MNYDKQVVIEGLKRTIEQNEEKIIEYSKPCDARKRRIRALERDLLKKKNKELRGKVEELEDEI*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0043	shell	direct	high	191	0.995	GCA_001337855.1_00332
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	29041	29208	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	29042	29209	GCA_001337855_1_3_44	GCA_001337855_1_3_44	-	132830	.	.	hypothetical protein	MVGVTYQEIHLFVEFLKKQYGQGRPDYIEALNDLDGMAEVSYREAIERFLDDELR*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0044	persistent	direct	high	167	0.994	GCA_001337855.1_00333
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	29224	29619	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	29225	29620	GCA_001337855_1_3_45	GCA_001337855_1_3_45	-	132830	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MINNVTLVGRLTKDPELKHTPSNVAVATFTLAVNRNFKGANGEREADFINCMMWRKQAELFAEWCKKGNLVGVTGRIQTRNYENQEGRRVYLTEVVADGFERLEKRDDTANRSNIEEQMPGYALEEDDFPF*	common_virus_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0045	persistent	direct	high	395	0.997	GCA_001337855.1_00334
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	29612	29713	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	29613	29714	GCA_001337855_1_3_46	GCA_001337855_1_3_46	-	132830	.	PFAM:PF00436.24	single-strand-DNA-binding-protein	MIEFIKEFGITFLCFFIGYSVVECATGKEKKDD*	phrogs_hmm	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0046	shell	direct	high	101	0.99	GCA_001337855.1_00335
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	29706	29933	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	29707	29934	GCA_001337855_1_3_47	GCA_001337855_1_3_47	-	132830	.	.	hypothetical protein	MLELYFVYNGHCKFYLGMFDNVDDLIEQTEDHQWAFSAITQPRFPKHIGQRTTRFDYGAKDCYYLATFSGGEEND*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0047	shell	direct	high	227	0.996	GCA_001337855.1_00336
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	29933	30127	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	29934	30128	GCA_001337855_1_3_48	GCA_001337855_1_3_48	-	132830	.	.	hypothetical protein	MFILRHGTREDKPFLRSVVIGVTGLDISYSEEKKAMRFVSRGVAVQVGKALRGSFGNFYPVEVE*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0048	persistent	direct	high	194	0.995	GCA_001337855.1_00337
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	30142	30912	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	30143	30913	GCA_001337855_1_3_49	GCA_001337855_1_3_49	-	132830	.	PDB:4M4W_K	Replicative-helicase	MVDNVFEEIALSYHRNTEQQDEFCERHNIPLIKILRTESVVCRMCESERIHEENQARVNELADAENERERKYYLEKFSLYDEVLKNATLDNFETPTEKEAEKLAFAKRICREWSEGARNNIVLQGEAGTGKSHLAFAMVKALSEYTKEIAIFINVTDLLMKIKADFSQEEFLVNKIASAKFLVLDDLGMEKDSEWSFTILYNILNKRSNTIITTNLISADIQKRYGRPFMSRLMKGVDKDHLMVFNDLTNKRKHYF*	rep_hall_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0049	persistent	direct	high	770	0.999	GCA_001337855.1_00338
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	30906	31064	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	30907	31065	GCA_001337855_1_3_50	GCA_001337855_1_3_50	-	132830	.	.	hypothetical protein	MGVLELIEQFEIDYYPLSYEKKTLLANQPIHQVVACLSEMASWHKCGGRLSW*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0050	persistent	direct	high	158	0.994	GCA_001337855.1_00339
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	31052	31870	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	31053	31871	GCA_001337855_1_3_51	GCA_001337855_1_3_51	-	132830	.	PFAM:PF09681.9	replisome-organiser	MLGMSEIKWIKITTDIFDDEKICLIDALPDPDAILVIWFKILTLAGKHNSNGLLMMTDKVHYTDEMLATIFRRPLNTVRMAIGVFEQFGMIEIIDGIISLPNWEKHQNVDGMEKIKEQTRNRVAKYRKKQKNLALGNVTGNVTVTDGNALEEDKDKNKNRLDKDKNKKRITTTTSSGGQENILELFQSEFRRLLSGFEIEEINHLLNENDVDLVKEALKTAINSGKPNIKYIGGILRNWQMNNVTTVEQVRQSEKKNKDKKEEQEAKDEWGY*	rep_hall_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0051	persistent	direct	moderate	810	0.989	GCA_001337855.1_00340
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	31854	32150	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	31855	32151	GCA_001337855_1_3_52	GCA_001337855_1_3_52	-	132830	.	.	hypothetical protein	MEELIEWLDNLIMIVKELEGRESTSRHFITTWENDYKNLLLVKEYLTDYKKLAKDYRDVELKNKLLKIEKMELEGRYIYEDMRMKYRANRRKWGARYV*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0052	shell	direct	high	296	0.997	GCA_001337855.1_00341
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	32163	32486	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	32164	32487	GCA_001337855_1_3_53	GCA_001337855_1_3_53	-	132830	.	.	hypothetical protein	MFEPPILDQLMGVGALLIGFAGLCRHIKLQEKREEEERREEQEFASMIIQGYNHAYERGREAERQQIRKNIRREFKGFTYDNEPPVGLRPEPLALPEPKQSAIRFLS*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0053	shell	direct	high	323	0.997	GCA_001337855.1_00342
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	32499	32789	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	32500	32790	GCA_001337855_1_3_54	GCA_001337855_1_3_54	-	132830	.	.	hypothetical protein	MEGITLQLRLDGESAELFTNQLLAFAEKQVKEQLENDRMPINQQALMKKFGFTHGYIKKLERKGLRFRKQGKDIMYDINDVYEILELEKEVRKLRA*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0054	persistent	direct	high	290	0.997	GCA_001337855.1_00343
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	32893	33036	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	32894	33037	GCA_001337855_1_3_55	GCA_001337855_1_3_55	-	132830	.	.	hypothetical protein	MEDKIIELADYFISESTTYREAKIACEKLFRQVSHEIELRALESKTV*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0055	persistent	direct	high	143	0.993	GCA_001337855.1_00344
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	33153	33377	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	33154	33378	GCA_001337855_1_3_56	GCA_001337855_1_3_56	+	132830	.	.	hypothetical protein	MSKLSHKPNHVVKKLTWENLDNILLSYFSESTTDKPSAVIQLSDFEMSKAEIIEEATAQGYQVIDNSDGYLKFL*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0056	shell	direct	high	224	0.996	GCA_001337855.1_00345
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	33340	33495	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	33341	33496	GCA_001337855_1_3_57	GCA_001337855_1_3_57	-	132830	.	.	hypothetical protein	MRPRRYPYSGKRKKQSDRQIAKLKRDIDVNRTNISSLKFVIETLSNHQNYR*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0057	shell	direct	high	155	0.994	GCA_001337855.1_00346
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	33509	34219	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	33510	34220	GCA_001337855_1_3_58	GCA_001337855_1_3_58	-	132830	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MNEIFNFHGQEVRTLTIDDEPWFVGKDVADILGYSKARNAIALHVDEEDALKQGIPTSGGTQDMLIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIREDLDEDAFIALFTGQKKLREQQTTMLEDIDYLKSEQPIHPSYAQSLLKKRKARVVACLGGIDSPAYADKIFAQSVFRQAEIDFKDHFNISRYDLLPKKHADAALAYWMTWEPSTNTKMKIMELNAFSQA*	common_virus_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0058	shell	direct	high	710	0.999	GCA_001337855.1_00347
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	34266	34526	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	34267	34527	GCA_001337855_1_3_59	GCA_001337855_1_3_59	-	132830	.	.	hypothetical protein	MSSLSKNLLPIQNLEIKIDSDSSIPRVILNGVDFQTEDICLQGIKIIWETKKDEVPETLIQVDYINNREAPHIVSVKQSFKNTLLK*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0059	shell	direct	high	260	0.996	GCA_001337855.1_00348
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	34566	34718	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	34567	34719	GCA_001337855_1_3_60	GCA_001337855_1_3_60	-	132830	.	.	hypothetical protein	MANKEFKNSYIDRKKLSSSLKTLMTQQAIERAELAESQRKELEKFLKDLL*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0060	shell	direct	high	152	0.993	GCA_001337855.1_00349
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	34782	35312	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	34783	35313	GCA_001337855_1_3_61	GCA_001337855_1_3_61	+	132830	.	.	hypothetical protein	MPQITNDNVQIWTLYITVIIAVIGFVFNTISLWQTKKATEDMAKPYINVYVDVYAVKNQQRTFVFKNFGQTPAYIDNIQIDGELDPLNSVHRFNSLIGNMIAPGQKFTSSIDPDYKGRITLTITYSDSKKHKYIDKFVLDATLASAMFYTVNESNKSDSPATAIRQSTMALLRDLR*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0061	shell	direct	high	530	0.998	GCA_001337855.1_00350
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	35338	35478	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	35339	35479	GCA_001337855_1_3_62	GCA_001337855_1_3_62	-	132830	.	.	hypothetical protein	MNANVNVFYELTCKDLNEAIDAKNKIIANTLDDETVEIKIEFLRDV*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0062	shell	direct	high	140	0.993	GCA_001337855.1_00351
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	35511	35702	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	35512	35703	GCA_001337855_1_3_63	GCA_001337855_1_3_63	-	132830	.	.	hypothetical protein	MEVFLYVVIVSAITSFLVTVMLLRGYSNRLTEMLENFFDNELQARKEIQKLTLDTMDRIANKK*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0063	shell	direct	high	191	0.995	GCA_001337855.1_00352
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	35712	35909	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	35713	35910	GCA_001337855_1_3_64	GCA_001337855_1_3_64	-	132830	.	.	hypothetical protein	MNNAAQKVTRIDRDAWEIATELANEYGVSICHIISESVRYCAENAEFKEMDVVVKRLVVGSKVLE*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0064	persistent	direct	high	197	0.995	GCA_001337855.1_00353
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	35921	36106	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	35922	36107	GCA_001337855_1_3_65	GCA_001337855_1_3_65	-	132830	.	PFAM:PF13744.5	transcriptional-repressor	MYGAKMRELRMVQKLGLRELAKRTLIDYTTLSRIENDLKAVTLSQAVVIAKALGCRVEDML*	phrogs_hmm	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0065	persistent	direct	moderate	171	0.919	GCA_001337855.1_00354
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	36229	36420	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	36230	36421	GCA_001337855_1_3_66	GCA_001337855_1_3_66	-	132830	.	PFAM:PF13744.5	transcriptional-repressor	MQILLYELRKSKGLTQKNLADKLGISETAYRQKEKGQRPFTQDEMFFLHSFFNKPLQEIFLPR*	phrogs_hmm	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0066	shell	direct	high	191	0.995	GCA_001337855.1_00355
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	36436	36594	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	36437	36595	GCA_001337855_1_3_67	GCA_001337855_1_3_67	-	132830	.	.	hypothetical protein	MDWKKFLFGNFDYEKMNQDNHAKTSLEIRGGLIPSILFWSGIIVLILYLIFR*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0067	shell	direct	high	158	0.994	GCA_001337855.1_00356
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	36954	37742	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	36955	37743	GCA_001337855_1_3_68	GCA_001337855_1_3_68	+	132830	.	PDB:2FJR_A	Repressor-protein-CI	MDLKKYIGNQIKLFRKSAGFTQDELAQKLNTTKQTISRYEKGERKANQDMLFSLCDILGVSIDDFFPSISKGDTPTASPDSLTQQITDKVVQLTPDNKKIVLRTSEDLLKEQKNEEEAKINEVSEVISLYQVEVVSETAAASGFNYGFGYDDTDRETIEVDEQPPRHDIATKVSGDSMQPDYQDGDILYLVDKGLTTYNGDLAVIAYGDRSYFKKIYTENGRLRLVSLNDKYEDITLDFPPAEDTHIKIYAVVGVYRGGATY*	common_virus_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0068	shell	direct	high	788	0.999	GCA_001337855.1_00357
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	37739	38629	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	37740	38630	GCA_001337855_1_3_69	GCA_001337855_1_3_69	+	132830	.	PFAM:PF07751.10	abortive-infection-resistance-protein	MSRQPKWNNRKLINHLASKDVTFNNISIGQAITFLDKNNYYYKLAAFRKNFKKKDGKYVDLDFSYLQDLASLDMKIRAILLNIAIDVEHFIKVELSRQINNNPQEDGYSILTEFKNSQYNKYYEFTKKKFRESRYQNAMFNKRKHDYPYWALLEHMDYGCLIKFVTFYYQKHGCKSLKKASELGDGARHIRNACAHNSVLLLNVFEKNDKLSNVNAVITTFAKQVDVIKYKNYKKVNDLISLLVLAKAYCSPAVLDYQKQAIDNFIVRCQRNQSAYAKNVELTKMMVVFKKIVDIL*	phrogs_hmm	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0069	shell	direct	high	890	0.999	GCA_001337855.1_00358
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	38973	40118	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	38974	40119	GCA_001337855_1_3_70	GCA_001337855_1_3_70	+	132830	.	PDB:1XO0_A	Recombinase	MIKKYITKKGETRYLFQTYLGIDPATGKEKRTTRRGFKTIKEAKAAERDLLLDVEENGFSNNEDFQNPTFAEVAELWLDSYKSTVKPTTYQNVKKKLDVMIDLYFTDMKIQQISVAYCQKVAIKLSNRYILYANYYSVISRIFKYATSIDIIKSNPLDKIIKPKNRPLKAKENYYTKQELTEFLKVCRVDCKPVEYTFYHLLAFTGLRCGEALGLMWSDVDFENKRLSISRTAVVVNKKQTVQDPKTKKSKRVITLDDETLNVLKLWKRQQIKEYFRASVPYKHDSNYIFTNSFGGWISPSAVKERLRRFFCEHKDVKKITPHGFRHTHASLLFEAGVTAKIISDRLGHNNVQTTLDMYTHINDNQRFEVVDQLMDFIRSS*	common_virus_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0070	persistent	direct	high	1145	0.999	GCA_001337855.1_00359
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	40251	40820	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	40252	40821	GCA_001337855_1_3_71	GCA_001337855_1_3_71	+	132830	.	COG4116	Predicted triphosphatase or cyclase YjbK, contains CYTH domain [General function prediction only]. 	MKHLEIELKTLLKKDEYDRLKDQFTGVTPVLQKNYYIDTPDFELREKKVAMRIRTFEDWAELTLKVPQSVGNMEYNQKLQLKDAENYLSKKEFPQGIVLDELAKHGIQTSEWQVLGCLTTLRYEMQTAIGLMALDESQYFDMTDYELELEVENHEQGKQDFQQFLEENQSSYQKAPSKLVRFVKSMKNS*	mmseqs_cdd	nonviral_gene	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0071	persistent	direct	high	569	0.998	GCA_001337855.1_00360
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	40933	41892	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	40934	41893	GCA_001337855_1_3_72	GCA_001337855_1_3_72	+	132830	.	PDB:5IV5_BD	Baseplate-wedge-protein	MSDRKNMKLFALNSNQEIAQKIAEAVGVPLGKLSSRQFSDGEIQVNIEESVRGYDVYIIQSTSFPVNNHLMELLIMVDACVRASAHSINVVLPYFGYARQDRIACPREPLTAKLVANMLVKAGVDRILTLDLHAVQVQGFFDIPVDNLFTVPLFAKHYCDKGLLGSDVVVVSPKNSGVKRARSLAEYLDAPIAIIDYPQDDATRNEGYIIGDVEGKKAILIDDILNTGRTFSEAAKIVEREGATEIYAVSSHGLFVEGAAELLDNTNIKEILVTDSVATKEKTPKNVCYITASELIGDAIVRIHERKPVSPLFAYNKKK*	common_virus_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0072	persistent	direct	high	959	0.999	GCA_001337855.1_00361
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	41902	43017	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	41903	43018	GCA_001337855_1_3_73	GCA_001337855_1_3_73	+	132830	.	COG1104	Cysteine sulfinate desulfinase/cysteine desulfurase or related enzyme [Amino acid transport and metabolism]. 	MIYLDNAATTPMSAVAISAMTKVMQENHGNPSSIHGHGRQAGKLLREARQELAQLLRTKPQHIFFTSGGTEANNTTIIGYCLRHQEQGKHIITTAIEHHAVLETIDYLVQHFGFEATIIQPENQEITAQQIQEALRDDTILVSTMFANNETGNLLPIAEIGQILKQHPAAYHVDAVQAIGKIPIHPEELGIDFLTASAHKFHGPKGIGFLYASSMDFDSYLHGGDQEQKKRAGTENLAAIVGMVAALKEDLEKQEEHFQHVQNLETAFLAELEGIQYYVNRGQDHLPYVLNIGFPDQKNDLLLLRLDLAGISISTGSACTAGIVQSSHVLEAMYGANSERLKESVRISLSPQNTVEDLQTLAKTLKEIIGG*	mmseqs_cdd	nonviral_gene	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0073	persistent	direct	high	1115	0.999	GCA_001337855.1_00362
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	43022	43369	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	43023	43370	GCA_001337855_1_3_74	GCA_001337855_1_3_74	+	132830	.	pfam08866	Putative amino acid metabolism. Solution of the structure of the Lactobacillus plantarum protein from this family has indicated a potential new fold with remote similarities to TBP-like (TATA-binding protein) structures. This similarity, in combination with genomic context analysis, leads us to propose an involvement in amino-acid metabolism. The potentially novel fold is an alpha + beta fold comprising two beta sheets packed against a single helix. The enzyme is present in the cytosol.	MAFEKTIQLKNCRYDYTLSPSVKKFTLKDNTFFETKVGNYELTRLLEKVPNSGEGFQLKIIINKELTGAKINITDKFGLRLVDIFKSEDHHIHQEKFYFLMDSLVERGVFTKSER*	mmseqs_cdd	nonviral_gene	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0074	persistent	direct	high	347	0.997	GCA_001337855.1_00363
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	43377	43592	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	43378	43593	GCA_001337855_1_3_75	GCA_001337855_1_3_75	+	132830	.	4IAJ_D	Conserved domain protein	MFELTYKDSYHVERTLKYEDYEALMLALSGCVTLPDTLYVTSLTFNSQKIYQGLVGDLYRFLSHTDFLHQN*	hhsuite_tools	nonviral_gene	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0075	persistent	direct	high	215	0.995	GCA_001337855.1_00364
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	43675	44316	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	43676	44317	GCA_001337855_1_3_76	GCA_001337855_1_3_76	+	132830	.	PRK05472	redox-sensing transcriptional repressor Rex; Provisional	MKDKQFAIPKATAKRLSLYYRIFKRFHAEKIERANSKQIAEAIGIDSATVRRDFSYFGELGRRGFGYDVKKLMTFFADLLNDNSITNVMLVGIGNMGHALLHYRFHERNKMKIIMAFDLDDHPEVGTQTPDGIPIYGISQIKDKIKDADVKTAILTVPSVKSQEVANLLVDAGVKGILSFSPVHLHLPKDVVVQYVDLTSELQTLLYFMRKED*	mmseqs_cdd	nonviral_gene	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0076	persistent	direct	high	641	0.998	GCA_001337855.1_00365
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	44334	45023	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	44335	45024	GCA_001337855_1_3_77	GCA_001337855_1_3_77	+	132830	.	pfam07722	Peptidase C26. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C-terminus.	MKKPVIGITGNEKTHPDDDIMMSYAAKGFVEGVKDAGGIPIILPIGDQEMACHYISMIDKLILTGGQNVDPKFYGEPKTIDSDDYHLQRDIFELALIKEAIKQKKPIFSVCRGTQLFNVAMGGTLYQDIEDHWQNCSAEYTTQRLVTEPDTVLREIYGEISHINSFHHQSIKDLAPNLKIAAHDPKDGIIEAVMSTDDVAFLGVQWHPEFLFENRPKDKNLFDYVVNEL*	mmseqs_cdd	nonviral_gene	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0077	persistent	direct	high	689	0.999	GCA_001337855.1_00366
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	45020	45700	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	45021	45701	GCA_001337855_1_3_78	GCA_001337855_1_3_78	-	132830	.	PRK00024	DNA repair protein RadC. 	MYSISFQEDSLLPRERLAKEGVEALSNQELLAILLRTGTRQASVFEIAQKVLSNLSSLTDLKKMTLQELQSLSGIGRVKAIELQAMIELGHRIHKHETLEMESILSSQKLAKKMQQELGDKKQEHLVALYLNTQNQIIHQQTIFIGSATRSIAEPREILHYAIKHMATSLILVHNHPSGAVAPSRNDDHVTKIVKEACDLMGIVLLDHLIVSQSSYFSYREKTDLI*	mmseqs_cdd	nonviral_gene	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0078	persistent	direct	high	680	0.999	GCA_001337855.1_00367
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	45743	48034	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	45744	48035	GCA_001337855_1_3_79	GCA_001337855_1_3_79	-	132830	.	PDB:1UAA_B	Replicase	MNALLNGMNDRQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKLVNPWNILAITFTNKAAREMKERAYSLNPATQDCLIATFHSMCVRILRRDADHIGYNRNFTIVDPGEQRTLMKRILKQLNLDPKKWNERTILGTISNAKNDLIDDVAYAAQAGDMYTQIVSQCYTAYQKELRQSESVDFDDLIMLTLRLFDQNPDVLTYYQQKFQYIHVDEYQDTNHAQYQLVKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPQAKVVLLEENYRSTKTILQAANEVIKNNKNRRPKNLWTQNADGEQIVYYRANDELDEAVFVAKTIDELGRSQNFLHKDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDIIAYLNLIANLSDNISFERIINEPKRGIGPGTVEKIRDFANVQNMSMLDSSANIMLSGIKGKAAQSIWDFANMILDLREQLDQLSITELVEAVLEKTGYVDILNAQATLESKARVENIEEFLSVTKNFDDTSDGPEEETGLDKLSRFLNDLALIADTDSGSQETSEVTLMTLHAAKGLEFPVVFLIGMEENVFPLSRAAEDPDELEEERRLAYVGITRAEKILYLTNANSRLLFGRTNYNRPTRFINEISSDLLEYQGLARPANTSFKASYSSGGVAFGQGMSLAQALQDRKRSAAPKSIQSSGLPFGQFTAGAKSASSEANWSIGDIALHKKWGEGTVVEVSGSGATQELKINFPEVGLKKLLASVAPIEKKI*	common_virus_hmm	common_virus	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0079	persistent	direct	high	2291	1.0	GCA_001337855.1_00368
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	48198	48452	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	48199	48453	GCA_001337855_1_3_80	GCA_001337855_1_3_80	-	132830	.	.	hypothetical protein	MRFSDFKIFSNSVCNHIITEGLGFRALLLYTISKAKLGENILVSQSIVSVEVPQYCRFDSKKRNGILFNVRIANLKFTFFILMY*	.	hypothetical_protein	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0080	persistent	direct	high	254	0.996	GCA_001337855.1_00369
GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote	cenote	CDS	48551	49411	GCA_001337855.1	CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855.1_CHTX01000003.1	GCA_001337855.1|CHTX01000003.1	GCA_001337855_1_3	GCA_001337855_1_3@C0	48552	49412	GCA_001337855_1_3_81	GCA_001337855_1_3_81	-	132830	.	PRK07281	methionyl aminopeptidase. 	MITLKSAREIEAMDKAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENFLPLQIGVDGAMMDYPYATCCSLNDEVAHAFPRHYILKDGDLLKVDMVLGGPIAKSDLNVSKLNFNNVEQMKKYTQSYSGGLADSCWAYAVGTPSEEVKNLMDVTKEAMYKGIEQAVIGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGIAGRGLRLREGMVLTIEPMINTGDWEIDTDMKTGWAHKTIDGGLSCQYEHQFVITKDGPVILTSQGEEGTY*	mmseqs_cdd	nonviral_gene	C0	49412	0	49412	GCA_001337855.1|CHTX01000003.1@region_1_49412@tool_cenote_CDS_0081	persistent	direct	high	860	0.999	GCA_001337855.1_00370