core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001374975.1|CTDU01000016.1@region_1_5441@tool_cenote	cenote	CDS	1	1194	GCA_001374975.1	CTDU01000016.1	GCA_001374975.1|CTDU01000016.1	GCA_001374975.1_CTDU01000016.1	GCA_001374975.1|CTDU01000016.1	GCA_001374975_1_13	GCA_001374975_1_13	2	1195	GCA_001374975_1_13_1	GCA_001374975_1_13_1	+	5441	.	PFAM:PF05840.12	Rep-protein	RPEGDEKWFLENEKTVTQFCRKLAAERPLKDIRDEYNYPKKKGIKDECSRLLEASTMKSRRGFAIQRLMNAMRQAHADGWFIVFDTLTLADDRLEAFYDNPNALRDYFRDIGRMVLAAEGRKANDSHADCYQYFCVPEYGTANGRLHFHAVHFMRTLPTGSVDPNFGRRVRNRRQLNSLQNTWPYGYSMPIAVRYTQDAFSRSGWLWPVDAKGEPLKATSYMAVGFYVAKYVNKKSDMDLAAKGLGAKEWNNSLKTKLSLLPKKLFRIRMSRNFGMKMLTMTNLSTECLIQLTKLGYDATPFNQILKQNAKREMRLRLGKVTVADVLAAQPVTTNLLKFMRASIKMIGVSNLQSFIASMTQKLTLSDISDESKNYLDKAGITTACLRIKSKWTAGGK*	rep_hall_hmm	common_virus	NaN	.	0	5441	GCA_001374975.1|CTDU01000016.1@region_1_5441@tool_cenote_CDS_0001	cloud	direct	moderate	1025	0.858	GCA_001374975.1_00585
GCA_001374975.1|CTDU01000016.1@region_1_5441@tool_cenote	cenote	CDS	1191	1451	GCA_001374975.1	CTDU01000016.1	GCA_001374975.1|CTDU01000016.1	GCA_001374975.1_CTDU01000016.1	GCA_001374975.1|CTDU01000016.1	GCA_001374975_1_13	GCA_001374975_1_13	1192	1452	GCA_001374975_1_13_2	GCA_001374975_1_13_2	+	5441	.	PFAM:PF12025.7	protein-C	MRKFDLSLRSSRSSYFATFRHQLTILSKTDALDEEKWLNMLGTFVKDWFRYESHFVHGRDSLVDILKERGLLSESDAVQPLIGKKS*	common_virus_hmm	common_virus	NaN	.	0	5441	GCA_001374975.1|CTDU01000016.1@region_1_5441@tool_cenote_CDS_0002	cloud	ambiguous	low	5	0.019	GCA_001374975.1_00585
GCA_001374975.1|CTDU01000016.1@region_1_5441@tool_cenote	cenote	CDS	1448	1906	GCA_001374975.1	CTDU01000016.1	GCA_001374975.1|CTDU01000016.1	GCA_001374975.1_CTDU01000016.1	GCA_001374975.1|CTDU01000016.1	GCA_001374975_1_13	GCA_001374975_1_13	1449	1907	GCA_001374975_1_13_3	GCA_001374975_1_13_3	+	5441	.	PDB:1CD3_4	Scaffold-protein	MSQVTEQSVRFQTALASIKLIQASAVLDLTEDDFDFLTSNKVWIATDRSRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNIQTACLIMEGAEFTENIINGVERPVKAAELFAFTLRVRAGNTDVLTDAEENVRQKLRAEGVM*	hallmark_hmm	common_virus	NaN	.	0	5441	GCA_001374975.1|CTDU01000016.1@region_1_5441@tool_cenote_CDS_0003	.	unmatched_CDS	none	0	0	.
GCA_001374975.1|CTDU01000016.1@region_1_5441@tool_cenote	cenote	CDS	1906	2022	GCA_001374975.1	CTDU01000016.1	GCA_001374975.1|CTDU01000016.1	GCA_001374975.1_CTDU01000016.1	GCA_001374975.1|CTDU01000016.1	GCA_001374975_1_13	GCA_001374975_1_13	1907	2023	GCA_001374975_1_13_4	GCA_001374975_1_13_4	+	5441	.	CDD:PHA00008	DNA-packaging-protein	MSKGKKRSGARPGRPQPLRGTKGKRKGARLWYVGGQQF*	hallmark_hmm	common_virus	NaN	.	0	5441	GCA_001374975.1|CTDU01000016.1@region_1_5441@tool_cenote_CDS_0004	.	unmatched_CDS	none	0	0	.
GCA_001374975.1|CTDU01000016.1@region_1_5441@tool_cenote	cenote	CDS	2059	3342	GCA_001374975.1	CTDU01000016.1	GCA_001374975.1|CTDU01000016.1	GCA_001374975.1_CTDU01000016.1	GCA_001374975.1|CTDU01000016.1	GCA_001374975_1_13	GCA_001374975_1_13	2060	3343	GCA_001374975_1_13_5	GCA_001374975_1_13_5	+	5441	.	PDB:1M06_F	Major-Capsid-Protein	MSNIQTGAERMPHDLSHLGFLAGQIGRLITISTTPVIAGDSFEMDAVGALRLSPLRRGLAIDSTVDIFTFYVPHRHVYGEQWIKFMKDGVNATPLPTVNTTGYIDHAAFLGTINPDTNKIPKHLFQGYLNIYNNYFKAPWMPDRTEANPNELNQDDARYGFRCCHLKNIWTAPLPPETELSRQMTTSTTSIDIMGLQAAYANLHTDQERDYFMQRYHDVISSFGGKTSYDADNRPLLVMRSNLWASGYDVDGTDQTSLGQFSGRVQQTYKHSVPRFFVPEHGTMFTLALVRFPPTATKEIQYLNAKGALTYTDIAGDPVLYGNLPPREISMKDVFRSGDSSKKFKIAEGQWYRYAPSYVSPAYHLLEGFPFIQEPPSGDLQERVLIRHHDYDQCFQSVQLLQWNSQVKFNVTVYRNLPTTRDSIMTS*	hallmark_hmm	common_virus	NaN	.	0	5441	GCA_001374975.1|CTDU01000016.1@region_1_5441@tool_cenote_CDS_0005	cloud	direct	high	1283	0.999	GCA_001374975.1_00586
GCA_001374975.1|CTDU01000016.1@region_1_5441@tool_cenote	cenote	CDS	3453	3980	GCA_001374975.1	CTDU01000016.1	GCA_001374975.1|CTDU01000016.1	GCA_001374975.1_CTDU01000016.1	GCA_001374975.1|CTDU01000016.1	GCA_001374975_1_13	GCA_001374975_1_13	3454	3981	GCA_001374975_1_13_6	GCA_001374975_1_13_6	+	5441	.	PDB:1GFF_2	Major-Capsid-Protein	MFQTFISRHNSNFFSDKLVLTSVTPASSAPVLQTPKATSSTLYFDSLTVNAGNGGFLHCIQMDTSVNAANQVVSVGADIAFDADPKFFACLVRFESSSVPTTLPTAYDVYPLDGRHDGGYYTVKDCVTIDVLPRTPGNNVYVGFMVWSNFTATKCRGLVSLNQVIKEIICLQPLK*	hallmark_hmm	common_virus	NaN	.	0	5441	GCA_001374975.1|CTDU01000016.1@region_1_5441@tool_cenote_CDS_0006	.	unmatched_CDS	none	0	0	.
GCA_001374975.1|CTDU01000016.1@region_1_5441@tool_cenote	cenote	CDS	3989	4975	GCA_001374975.1	CTDU01000016.1	GCA_001374975.1|CTDU01000016.1	GCA_001374975.1_CTDU01000016.1	GCA_001374975.1|CTDU01000016.1	GCA_001374975_1_13	GCA_001374975_1_13	3990	4976	GCA_001374975_1_13_7	GCA_001374975_1_13_7	+	5441	.	CDD:pfam04687	pilot-protein	MFGAIAGGIASALAGGAMSKLFGGGQKAASGGIQGDVLATDNNTVGMGDAGIKSAIQGSNVPNPDEAVPSFVSGAMAKAGKGLLEGTLQAGTSAVSDKLLDLVGLGGKSAADKGKDTRDYLAAAFPELNAWERAGADASSAGMVDAGFENQKELTKMQLDNQKEIAEMQNETQKEIAGIQSATSRQNTKDQVYAQNEMLAYQQKESTARVASIMENTNLSKQQQVSEIMRQMLTQAQTAGQYFTNDQIKEMTRKVSAEVDLVHQQTQNQRYGSSHIGATAKDISNVVTDAASGVVDIFHGIDKAVADTWNNFWKDGKADGIGSNLSRK*	hallmark_hmm	common_virus	NaN	.	0	5441	GCA_001374975.1|CTDU01000016.1@region_1_5441@tool_cenote_CDS_0007	cloud	direct	high	986	0.999	GCA_001374975.1_00587
GCA_001374975.1|CTDU01000016.1@region_1_5441@tool_cenote	cenote	CDS	5039	5440	GCA_001374975.1	CTDU01000016.1	GCA_001374975.1|CTDU01000016.1	GCA_001374975.1_CTDU01000016.1	GCA_001374975.1|CTDU01000016.1	GCA_001374975_1_13	GCA_001374975_1_13	5040	5441	GCA_001374975_1_13_8	GCA_001374975_1_13_8	+	5441	.	PFAM:PF05840.12	Rep-protein	MVRSYYPSECHADYFDFERIEALKPAIEACGISTLSQSPMLGFHKQMDNRIKLLEEILSFRMQGVEFDNGDMYVDGHKAASDVRDEFVSVTEKLMDELAQCYNVLPQLDINNTIDHRPEGDEKWFLENEKTVTQ	rep_hall_hmm	common_virus	NaN	.	0	5441	GCA_001374975.1|CTDU01000016.1@region_1_5441@tool_cenote_CDS_0008	.	unmatched_CDS	none	0	0	.
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	182118	183536	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	1	1419	GCA_001374975_1_24_173	GCA_001374975_1_24_173	+	243951	.	TIGR03810	arginine-ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2. [Transport and binding proteins, Amino acids, peptides and amines]	MADSDKGKLGLPALTALVVGGIIGSGIFSLPQNMAEGAGAGAILIAWAITFVGMLTLTRIFQWLSTTRPELDDGVYGYAREGFGEYLGFNAAWGYWISAWVGNAGYLVVLFSALGSFGALAFFGDGTTWPALLGELTVLWLMHAFVLHGVHNAAITNAIVTLAKVVPIALFILCVALAFRIETFHLDFWGSPALGSVTRQVETTMLYTVWVFLGIESATVYASHARHAADVSRATLLGFVVTLLLLVCVSVLSLGVVPQHELAQMKNPSMAQVMAAAVGPWGATLINVGLIVSVGGALLAWTMLAVEMLYLASRGPTHTAPALFGRTNAVETPAPALWLTSTLISALLLVAFLNASGYNALIQLATSMALIPYLLCAGFCLKLVARRPHSGAMLALALLGTLYGVWLIYAAGLKYLLLSMILYAPGLGFFLHARRQRDLPAFGNRAEGSVAALVLVLALAALWMIGSGRLSL*	mmseqs_cdd	nonviral_gene	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0001	persistent	direct	high	1418	0.999	GCA_001374975.1_01781
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	183538	184209	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	1421	2092	GCA_001374975_1_24_174	GCA_001374975_1_24_174	-	243951	.	COG2818	3-methyladenine DNA glycosylase Tag [Replication, recombination and repair]. 	MRDYAWMYEYCLNRFGSREALEARLPQPKSAAELCALGDDRYLSLISLRIFRAGLKHSLVDAKWPAFEEVFFGFDPQKVVLMSAEHLERLMQDARLIRHLGKLKSVPRNAQMVLDLAREHGSFGNFLADWPETDIVGLWKLLSKRGNQLGGLSAPRFLRMAGKDTFIPSEDMVAALKAQEIIDKPPTSLKDLAAVQGAFNQWREESGRPLCQLSVMLAHTVNH*	mmseqs_cdd	nonviral_gene	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0002	persistent	direct	high	671	0.999	GCA_001374975.1_01782
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	184256	185080	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	2139	2963	GCA_001374975_1_24_175	GCA_001374975_1_24_175	-	243951	.	PRK10696	tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	MGTLSVNQNKLQKRLRRLAGEAITDFNMIEDGDKVMVCLSGGKDSYTMLDILLYLQKVAPIRFEIVAVNMDQKQPGFPEHVLPEYLKSIGVEYHIVEKDTYSVVKEKIPEGKTTCSLCSRLRRGTLYTFADEIGATKMALGHHRDDILETFFLNMFYGGTLKAMPPKLLADDGRNVVIRPLAYCSEKDIEAYSQLKEFPIIPCNLCGSQENLQRQVVKEMLLEWERKSPGRTEIMFRALQNVVPSQLADRNLFDFANLRIDENATPRFLDVMNL*	mmseqs_cdd	nonviral_gene	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0003	persistent	direct	high	824	0.999	GCA_001374975.1_01783
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	185186	186202	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	3069	4085	GCA_001374975_1_24_176	GCA_001374975_1_24_176	-	243951	.	PDB:5C6K_B	Integrase	MAITKLEDGRWLADVEPIKGKRFRKRFKTKGEAQRFEAMVRTKHARQREWNPVQQDKRLLSELIERWYELHGHSITSGRRRKNLLLLIASRLGDPVGQRFTTADLVAFRKRELEEGALPRSINVRYSYLKTVFTELRRLGDIDYPNPLDRLKPLKPQQSVVSFLSKDQVAVLVSALRDYSTFPHLALISEVCLATGARWSEAQGLTLPMVRDGSVVFSNTKSKRVRSVPISTDLQARLEKYFAGRNRFPSCREAFARMVKRCGIVLPRGQCTHVLRHTFASHFMMNGGNILALKEILGHSSLNMTMRYAHLSPEYLRDAIRLNPLADFDSSSTLVETS*	common_virus_hmm	common_virus	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0004	cloud	direct	high	1016	0.999	GCA_001374975.1_01784
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	186202	187500	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	4085	5383	GCA_001374975_1_24_177	GCA_001374975_1_24_177	-	243951	.	4CIJ_B	GST REP (E.C.5.99.1.2)	MKKVKPIHQNRLLLQPDGQLLDSPKGRLFVDSITGAFTDLSGVRILRCGVDTVRQLYNGKLRPEVMALFDLSVDVVEFAGYEWSKGRIGRDSGYQYRLQNAEMGLILLIKNHNIKVDTIGSHLKIEVSPHALDGADPRILQGVLDDLAAAVLSHCETNQAAVHIALDVQGWKPPRDLVDRMHCRSRRVRQISGIERIEFDGNASVYGRGETYMFGSANGLQLSIYNKTLQARATDKLDYWESVWATLNGDPFGDGDPAYNPLETVWRIEFRFHHSVVQQFSEGSRMASGEVMGCRTYEGLCPHLQGLWGYACESFKLLSRSAVYDPFWSLISQDARVQVECDPLIERAEYRRYYKTAKGFSGRNCEMFLGQFVSLIARERIPAKKAIESARKLEFWHVIEDHYLAKGWTRRDLERHIHKLMCDRYLRRGYAI*	hhsuite_tools	hypothetical_protein	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0005	cloud	direct	high	1298	0.999	GCA_001374975.1_01785
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	187631	187732	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	5514	5615	GCA_001374975_1_24_178	GCA_001374975_1_24_178	-	243951	.	.	hypothetical protein	MIDWEFLVPVAMGWALHHWWTVMTALAAVGAPP*	.	hypothetical_protein	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0006	cloud	direct	high	101	0.99	GCA_001374975.1_01786
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	187729	189012	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	5612	6895	GCA_001374975_1_24_179	GCA_001374975_1_24_179	-	243951	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MSIKIHHGPNGSYKTSGAIQDDAVPALKDGRVIITNVRGFTLERAYQVFPDLPNTAEIINLDLESLEDLEKMRTWFQWAPRGAFLIFDETQLLFPKSWREKDLERFDYPGGPEAAHAADRPMGWLDAWTRHRHFNWDIVLTTPNISYIRDDIRMTCEMAYKHSNLAVIGIPGRYKEAQHDAQLNRPPADGTIIEYKRIRKQTFALYQSTATGKTQDTKAGKSLFRSPKLVLLLALLAGTIGFVSYMGPMRVIGAKPDPAASAPTPKPLPTATAPAAVAAPARPAANSFLPPGLVPDGPAAAPVDLNAHPFADRRISILAHAYMPSKGDIYMFALDDPAGRHLELTSWQLVGSGYAIKPRGECVAELLYGEWEGTVTCAGSSVRPVAVAGVPPLLNLPPSAAGAREPDKVPLTIVPDSEYASRPWRQK*	hallmark_hmm	common_virus	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0007	cloud	direct	high	1283	0.999	GCA_001374975.1_01787
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	189016	189372	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	6899	7255	GCA_001374975_1_24_180	GCA_001374975_1_24_180	-	243951	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MEWLSGFLDQIIAFFQWIWDFFAQGIYDFVRDGLVVATKASMYAALQTLILLIDVSYTAARELIDSLGVPQMIRSMYAALPGPIAAGLAFFGVPQALNIIMVAAATRFCMRFVPFIGR*	hallmark_hmm	common_virus	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0008	cloud	direct	high	356	0.997	GCA_001374975.1_01788
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	189377	190696	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	7260	8579	GCA_001374975_1_24_181	GCA_001374975_1_24_181	-	243951	.	.	hypothetical protein	MRIEKRARWFALVRQVCAVLLVLCSWSAYAEPYYWQLNGPTAPDRFTSPSAACEVGLGMYKAQYPTVEMVINSREMRGSTNYVCTVFRYFNGNRIEPNFTISVMRKGTGCAEGSTYNAQTGVCETPPENNCIKGLTDLFSSPPSNIFVSGGRNFVNSSPPTACKNGCQYLPTTSKTTSCYRYPGSDNQGFCNYVLMTDGSACAADSGNPGMTGPSLNDTPPTNPDEPPSDPNDPGCPPGYSWSGTTCVKTPTDPTEPGGDGGDGGNTGGGDGGGDNGGGNDNGGGDGGTGGSDGSGGNGEGGGDGSGGGDGSGGGTGGGDGGNCDPAKQDCSPGPAGPGGELKEPKPGTWDDAIATWEQKVEQAKKELKDKVRANVDQMKGAFDLNLAEGGGQLPCESMTIWGRSYSLCVADYADQLSNLRVALLLMAALIAAFILLRD*	.	hypothetical_protein	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0009	cloud	direct	high	1319	0.999	GCA_001374975.1_01789
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	190850	191098	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	8733	8981	GCA_001374975_1_24_182	GCA_001374975_1_24_182	-	243951	.	CDD:pfam05356	Filamentous-Major-Coat-protein	MKAMKQRIAKFSPVASFRNLCIAGSVTAATSLPAFAGVIDTSAVEAAITEGKGDMSSIGGYIVGALVILAVAGLVYSMLRKA*	hallmark_hmm	common_virus	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0010	cloud	direct	high	248	0.996	GCA_001374975.1_01790
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	191111	191362	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	8994	9245	GCA_001374975_1_24_183	GCA_001374975_1_24_183	-	243951	.	.	hypothetical protein	MSGVVAVQVCTAWTSTPEGFMACRELAWQQAYLIPPEAAGYVDILVNGGFSPEAFGIGAAGVLGSFVTGLLIGWVASLLRKAK*	.	hypothetical_protein	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0011	cloud	direct	high	251	0.996	GCA_001374975.1_01791
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	191375	191467	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	9258	9350	GCA_001374975_1_24_184	GCA_001374975_1_24_184	-	243951	.	.	hypothetical protein	MLRYLSLFAVGLATGYAWGWIDGLAASLAV*	.	hypothetical_protein	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0012	cloud	direct	moderate	92	0.989	GCA_001374975.1_01792
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	191484	191918	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	9367	9801	GCA_001374975_1_24_185	GCA_001374975_1_24_185	-	243951	.	.	hypothetical protein	MNMFATQGGVVELWVTKTDTYTSTKTGEIYASVQSIAPIPEGARGNAKGFEISEYNIEPTLLDAIVFEGQPVLCKFASVVRPTQDRFGRITNTQVLVDLLAVGGKPMAPTAQAPARPQAQAQAPRPAQQPQGQDKQDKSPDAKA*	.	hypothetical_protein	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0013	cloud	direct	high	434	0.998	GCA_001374975.1_01793
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	192434	192724	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	10317	10607	GCA_001374975_1_24_186	GCA_001374975_1_24_186	-	243951	.	pfam17525	Family of unknown function (DUF5447). This is a family of unknown function found in Pseudomonas.	MAASPYYLHQTHAPDCACSVCWSARQAIPLHSPSPCPDCRPPGLPYLEDGRWLCRPRSFCAKHDPSRRPPKYWHVVYDSGKPTPFVPVREAFQLEG*	mmseqs_cdd	nonviral_gene	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0014	cloud	direct	high	290	0.997	GCA_001374975.1_01794
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	192728	192940	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	10611	10823	GCA_001374975_1_24_187	GCA_001374975_1_24_187	-	243951	.	.	hypothetical protein	MRYLVEMCTFHGPTRQRRWHRVHQGISRVECQRWVEELVAIFPTEEEARRSFGLTRERARQVYRIRGVRA*	.	hypothetical_protein	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0015	cloud	direct	high	212	0.995	GCA_001374975.1_01795
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	192943	193158	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	10826	11041	GCA_001374975_1_24_188	GCA_001374975_1_24_188	-	243951	.	PFAM:PF11112.7	Cox-like-excisionase-and-repressor	MEVEEIKAQDLRAAPPVLPWRDFANWIGMGEEHETVRGWIRKGYIPAYKIGKHVMVNVALFVHQLMEREEF*	phrogs_hmm	hypothetical_protein	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0016	cloud	direct	high	215	0.995	GCA_001374975.1_01796
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	193841	194872	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	11724	12755	GCA_001374975_1_24_189	GCA_001374975_1_24_189	+	243951	.	PDB:3EZ9_B	ParA;-dna-binding,-winged-hth-protein	MSKRLVLFNHKGGVSKTTTVYNVGWMLAETHRVLLVDADPQCNLTSLILKDNFDGYYLEDQTKRQNIKDGVSPAFSGKPIPITPIACPSSERNQNLFLIPGHANLSEYDAALTFAQNSHNAIATLQNLPGAFSELIRLTEEEYNIDYTIIDLNPGLSAINQNLFLNSDVFALPTNPDPFSIMALDTLTAVLPRWAGWKKSAINMFSDSAYPLRDGVPKFGGAFIQRFNIRNGKAAAPYRENIDEIKQRLTEEMLPILQENDLAFDMDFYPAELVRHGYCLAEIQDFGGLLPKAYMAGVPVFAITDAEIGEVGNVLNSLTEKRDNLRARIQSAARLLEQILDNA*	common_virus_hmm	common_virus	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0017	cloud	direct	high	1031	0.999	GCA_001374975.1_01797
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	195404	195526	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	13287	13409	GCA_001374975_1_24_190	GCA_001374975_1_24_190	-	243951	.	.	hypothetical protein	MPLYHGRYGRQYPLLLINLSDLIVYLFPYSPQKLDYIYRL*	.	hypothetical_protein	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0018	.	unmatched_CDS	none	0	0	.
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	195848	196441	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	13731	14324	GCA_001374975_1_24_191	GCA_001374975_1_24_191	+	243951	.	PDB:1GH6_A	Large-T-antigen	MTPDLDHRLDLAGQILCLLREHPEGLSEYQLIQLLKARHSTHIPHRELADKLVLFRTHFLLFNALYHLRDHLWAEREAHLEISPLSLRLRPYVDGTQALEQGDPLRDYYLNLRHLGETSEADVERLLQSFWTRMQGSEEKAAALALFELEGAVDYPAIKLRYRQLVSQHHPDRGGSTARLQSINKAMEILQRYYSRP*	rep_hall_hmm	common_virus	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0019	persistent	direct	high	593	0.998	GCA_001374975.1_01798
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	196600	197199	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	14483	15082	GCA_001374975_1_24_192	GCA_001374975_1_24_192	+	243951	.	PF06930.12	Protein of unknown function (DUF1282)	MIHHVWGLFTHPDQEWQEIRGEEESISHMYLTHILILAAIPAISAYIGTTQVGWVVGGGDPVKLTQASALQMTVLTYLAMLAGVAVMGAFIHWMARTYDANPSLTQCIVFAAYNATPLFIAGLAALYPHLWLGMIVGVAAISYTVYLLYVGIPTFMNIHKDEGFLFSSSVLAVGLVVLVAMIALSVILWGSGVGPEYTS*	hhsuite_tools	hypothetical_protein	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0020	persistent	direct	high	599	0.998	GCA_001374975.1_01799
GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote	cenote	CDS	197367	197864	GCA_001374975.1	CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975.1_CTDU01000028.1	GCA_001374975.1|CTDU01000028.1	GCA_001374975_1_24	GCA_001374975_1_24@C5	15250	15747	GCA_001374975_1_24_193	GCA_001374975_1_24_193	+	243951	.	PRK04860	SprT family zinc-dependent metalloprotease. 	MPEHLNARVEACYRQAEHFFQRSFPRPTVSFRLRGQKAGVAHLDENLLRFNPQLYRENREHFLEQTVAHEVAHLIAHQLFGPRIRPHGEEWQLIMRGIYGLPPDRCHTYAVKRRATTRYLYRCHCPEHNEFPFSPQRHTLVAKGRRYYCRRCKATLVFTGEVLRE*	mmseqs_cdd	nonviral_gene	C5	15747.0	182118	197865	GCA_001374975.1|CTDU01000028.1@region_182119_197865@tool_cenote_CDS_0021	persistent	direct	high	497	0.998	GCA_001374975.1_01800
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	17550	18155	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	1	606	GCA_001374975_1_51_20	GCA_001374975_1_51_20	-	384050	.	PRK08857	aminodeoxychorismate/anthranilate synthase component II. 	MLLMIDNYDSFTYNLVQYFGELKAEVKVVRNDELSVEQIEALAPERIVLSPGPCTPNEAGVSLAVIERFAGKLPLLGVCLGHQSIGQAFGGEVVRARQVMHGKTSPIHHKNLGVFAGLANPLTVTRYHSLVVKRESLPECLEITAWTQHADGSLDEIMGVRHKTLNVEGVQFHPESILTEQGHELLANFLRQQGGVRGEGN*	mmseqs_cdd	nonviral_gene	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0001	persistent	direct	high	605	0.998	GCA_001374975.1_04590
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	18574	18804	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	1025	1255	GCA_001374975_1_51_21	GCA_001374975_1_51_21	-	384050	.	.	hypothetical protein	MIDWKMMKTPDQVSRERVQQEYDAVLARRAEAYRLESDPIKTEVEFDSIRAGVETDYAAWLAKVEEIKARYPLPRI*	.	hypothetical_protein	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0002	shell	direct	high	230	0.996	GCA_001374975.1_04591
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	18801	19103	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	1252	1554	GCA_001374975_1_51_22	GCA_001374975_1_51_22	-	384050	.	.	hypothetical protein	MRIELSPVVVLPEDSTDMDVMVSGDSIAVSGVMYDFSQLPEGGYLPASAIHEGPFSGRVTRAGGEICLTLVFPIRGSYSEAAKFPVPIHIVEDGTVELPK*	.	hypothetical_protein	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0003	shell	direct	high	302	0.997	GCA_001374975.1_04592
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	19103	20155	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	1554	2606	GCA_001374975_1_51_23	GCA_001374975_1_51_23	-	384050	.	UniProt:tr|A0A0N8LSN6_CITFR	Tail-protein	MTWYSSGTVAVTANSPTVTGTGTQFSSNARVGDAFRGPDGCWYEVTNVASSTVISIKPNYQGSTASGQPYAVAPILGYDKDLSDRFNQIAMDWGATLAGIKPWAIASTGSQAQADMGITEVGRAINGASTVGNALGFLGGVSKTQAPMALDMDTVNESGWFSITPNTYNVPLGNNNISGVNGHVALSMVFDASTRYQLFFVRNTNLPEVWYRSCTNGTWKEWVRFYTTDNIVGTVTRRLVTGKPTGAVMESGTTSNGWYVRFADGTQMAAARSEPGLSFGANVIQLPAAFVTGFNTGVTCNWIPSSGWPATAGQGVRGAYLNGSSSVSFATAQALGANDTITVMAVGRWY*	hallmark_hmm	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0004	shell	direct	high	1052	0.999	GCA_001374975.1_04593
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	20170	20880	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	2621	3331	GCA_001374975_1_51_24	GCA_001374975_1_51_24	-	384050	.	.	hypothetical protein	MIGFKARNTEKILVIDSSYQNLQMVAKGTLTTSKLDSGIGYYADVVVPSGRASAVLAIRWNGTAGEYPQPSGVYWKKLDATTFRVYAGSPSVQATFDYFLFCTPIQTTEGGVIGLRIRNSSGGGVVYDSRYKYLRVLDYINETLAVDGVFSKAYPGKKVALIQTLRANYTRIDSGGTVDHPIFVITLKSSCMATPTDDAVRIYYRSTDLYTGFGSITPAIAGVNYAGYLVVDVTGY*	.	hypothetical_protein	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0005	cloud	direct	high	710	0.999	GCA_001374975.1_04594
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	21185	24844	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	3636	7295	GCA_001374975_1_51_25	GCA_001374975_1_51_25	-	384050	.	PFAM:PF13550.5	tail-protein	MNKTITGHKGGSKKPRQPVEMPDSVRSIARAKILLALGEGEFDGGVDGRSIYLDDTPLLAADGSVNFPGVTWEFRPGSVDQEHIAGVPAVENELAVGVELKSDAPWVRAVNNTQLSAVRLRLSWPAIQRQQENGDVVGYRIDYAIDIAVDGGAWQEALKASLDDKSTSRYERSHRVDLPEARSGWQVRVRRLTPNQNNNRVADTMRVEAITEVIDAKLRYPNTALLFVEFDASQFQSIPQISVEARGRRVRVPSNYDPQTRSYSGTWDGSFKSAWTSNPAWHWYDIVLHKRFGLGRRIDASMVDKWSLYRIAQYCDQSVPDGKGGQEPRFSCNLYLQSRAEAWTVLRDLAAIFRGMSYWSGAEMVAVSDMPEDEAYTFSPSNTVRGDDGSHFNYSSSRQRDRHTLALVNYDNPGNGYQSQPVAVNNDRAQRRYGISQLEITAIGCTSEGEAQRRGQWALLTEELEQDAVTFRTGMDGRGLAPGKIIAVADPVKSGKQIGGRLSAVDGRALTLDRDVEARPGDRLLVNLPNGKAEARSVQSVVGRVLTVTAAYSETPRPQGQWALQSNSLTTQRFRIMSITRPEDNLFEITALQHNASKFDAIDNGARIELPPVTSIPPGVQAPPQNVRIKAFTKVDQGLAVTSLSASWDAAPNAVAYEAEWRKDSGNWVRVPRTSALGFDVPGIYAGRYLVRVRALNVMEVGSVYASSVETALEGKTTPPPALAYLRCVAGPWRIGLEWGFPASGAADTAYTEIQQSATPGGSEETARALGLFAYPGNTHLVSPIPAGERLAFRGRLIDRSGNVGAWSNWVTGTSSSDASEYNQLITQEYVESALGQQFFSDIERMQVDIGGLQKQVGDLADVLLYDPTKVYAKNEMVRQGQRLYQALKAVPAKTAPPNAAYWSDIGQSLETANGLAQQVASHTAEISELDGRIEAAASNLDVLQAAARGEPATGEKADALKGWDTIARAATEVTVRANEDEAQAKRTSLLEAWTGTAEGRIATVESVVASNNAVTVQRLDQLTGQVASNASAISTEQTVRANADSALGQRVDTVSARTDTNEANIQTTSQAVTSLDGNVKALYSVKLQAHANGQKYAAGWQLGFDSGTSVTTMAFQADRFLWFNSSSGQTVAPVSIVGGQMFINNAMIQEGTVSFLKIADDVQSTNYISGSSGWKLGKSGKFELNGAGTGYSLKLTPTGMYLTDTTTGVVVVELGLLS*	hallmark_hmm	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0006	shell	direct	high	3659	1.0	GCA_001374975.1_04595
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	24903	25505	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	7354	7956	GCA_001374975_1_51_26	GCA_001374975_1_51_26	-	384050	.	PFAM:PF06805.11	tail-assembly-protein-I	MNDTLSQGLTTIRLYGVLGKRFGRMHGRLLESGTVREAMSALKHTMEGFETFMREAESKGLTFAVFRGRTNLSGEQLDMRGREDIRIVPLVIGSKQSGLFQTVLGAALIAVGVFATSLTLGTSTFLISAGASMMLGGVMQMLSPQPKGLKGREAPENAPSYAFGGPVNTIAQGHPVGVLYGKRRIGGAVISAGIYAEDRL*	hallmark_hmm	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0007	shell	direct	high	602	0.998	GCA_001374975.1_04596
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	25560	26330	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	8011	8781	GCA_001374975_1_51_27	GCA_001374975_1_51_27	-	384050	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MELSRSLQRAIAAHAAREHPRECCGLIVRGVRQRRYVACRNAAGSPSEHFVIDHQDWCAAEDQGEVLAIVHSHPDVPATPSMADRVSCELHGLPWVILSWPEGDVAHLAPEGYRAPLLGREFAHGVLDCWSLCRDWYRREAGLELPDYPRRDGWWETGESLYEQHYAAAGFRPVPLAGIRRGDMLVMQVGRALHPNHAGIYLGNDWRLDSEPVQALGGDGPFLLHHLYGRLSTRDVFGGPWIERTRLVLRHMRMPQ*	mmseqs_cdd	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0008	shell	direct	high	770	0.999	GCA_001374975.1_04597
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	26333	27028	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	8784	9479	GCA_001374975_1_51_28	GCA_001374975_1_51_28	-	384050	.	PFAM:PF05100.11	minor-tail-protein-	MTITADDQALEPGALVRLFDLDCTGFGGEMLRFHGHLQQGPIHWQGNAYQAWPLEARGFEQRGDGRASSPTLSVGNIDGSISALCLFFDGLVGARLTVRETYAHYLDAANFAEGNPQADPSQERLNIWFLEQKTAENSVQVTWELSAPPDFQGQQIPARQITSLCHWCITNEYRGQDCNYTGTAMFDADGNPVDDPALDRCGGRVSDCKLRFGADNPLSHGGFAGAGLVRM*	hallmark_hmm	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0009	shell	direct	high	695	0.999	GCA_001374975.1_04598
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	27036	27377	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	9487	9828	GCA_001374975_1_51_29	GCA_001374975_1_51_29	-	384050	.	PFAM:PF05939.12	minor-tail-protein	MADLERFTWDISIDSAGQANQLVRQVQYGGGYSQALGDGLNNLSETWQVSRTGDLALIGPIRDFLKRHGGYRSFLWTLPTGEPVRVRAQGWQLRPRGNGVFTLNTTFQQVFNP*	hallmark_hmm	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0010	shell	direct	high	341	0.997	GCA_001374975.1_04599
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	27370	29205	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	9821	11656	GCA_001374975_1_51_30	GCA_001374975_1_51_30	-	384050	.	TIGR01541	phage tail tape measure protein, lambda family. This model represents a relatively well-conserved region near the C-terminus of the tape measure protein of a lambda and related phage. This protein, which controls phage tail length, is typically about 1000 residues in length. Both low-complexity sequence and insertion/deletion events appear common in this family. Mutational studies suggest a ruler or template role in the determination of phage tail length. Similar behavior is attributed to proteins from distantly related or unrelated families in other phage. [Mobile and extrachromosomal element functions, Prophage functions]	MATNTDGSLTLDLVLRSEGYRAGMDKVGRINDQKMRAMEARAEKAGKAIGKSLDSSALIASSVLDQALDMLGRTSRQAGQAKKPVQSAQDKVLAEWKTRQKELGEAWKSYREPLQDLSKLNEALLKNSSDKLDKALLNLSETGQLSLANVGKAAYADAARLASRQMTLMLLDGLFGWVASVGTEKPKVDDKAGKGQAKAGDDEKEQPSLQSQVFKQWLLQMNSVWGAYRAPLQDISGMTDELFRNASEKLEKSLFNFATSGKLSLSNFAKTVIDDVARIAARQLSMLALDGLFGWMNGKAGITEAQLASQKPYTSLLEKARAAAGQAVAGAPAAQGAAPMPAAAMDVGAMVATASGQTGDGSKVSAGGASAAGKPVGSWVEQMDASWASLRDQAQDVSGMMDMLFTNAFTNMENALFTFATTGKLSFKDFADSVIQDMARIAARQATLQIIGGIVGAVSGFFGSGATAGSRISDYTGSDMANWVSKQRAGGMPGFARGGAFNDGIQSAPALFSMAGGRPALIGERGPEAIMPLSRGSDGVLGVRALGGGEGGNVFNFSTSVSLGGGREGAATASGDDGTGQQLAGMINDAARNVVAQELRPGGLVWRMVNG*	mmseqs_cdd	nonviral_gene	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0011	shell	direct	high	1835	0.999	GCA_001374975.1_04600
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	29252	29506	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	11703	11957	GCA_001374975_1_51_31	GCA_001374975_1_51_31	-	384050	.	PFAM:PF06223.11	tail-protein	MLNGVGGSTIAEAKERLSYAEYRAWVAYLNKRGSLHPGHRLELALARIAALLGHALGADADPDAFRPHMALQPLSLHQAMDQWA*	phrogs_hmm	hypothetical_protein	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0012	shell	direct	high	254	0.996	GCA_001374975.1_04601
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	29536	29883	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	11987	12334	GCA_001374975_1_51_32	GCA_001374975_1_51_32	-	384050	.	CDD:pfam16459	Tail-assembly-chaperone	MNLNELRAAGGFIESALVRKEITWTRVPAGRKKAVSDTFQVFVRRNSFGAVERLFSAEGDQQSRNARYLAECIRLGETGEESLTYEQAYDLDPALGFLLLQAVGEVNRVEDAEKN*	hallmark_hmm	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0013	shell	direct	high	347	0.997	GCA_001374975.1_04602
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	29895	30389	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	12346	12840	GCA_001374975_1_51_33	GCA_001374975_1_51_33	-	384050	.	PFAM:PF16463.4	tail-tube-protein	MSILTQGTQIYALVPPVSGTGAATVLEIEGVTSFNPGGNPADQIEDPCLSDTSRKYKKGLRTPGQATLGINADPRLASHVRLFQLSEKDGETSVKWAIGWSDGIDVKPTVSTEGDDFVLPPARTWFTFEGYVSDFPFDFASNTLVATQATIQRSGAGKWTPKSA*	hallmark_hmm	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0014	shell	direct	high	494	0.998	GCA_001374975.1_04603
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	30705	30962	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	13156	13413	GCA_001374975_1_51_34	GCA_001374975_1_51_34	-	384050	.	.	hypothetical protein	MTRLLLGLCLLFAGCAASPTTPRPVRVEVPLAVPCRVPDVRPPSWASATLQAGDSLQAKVRALLAERRQRQGYELELQAALRACR*	.	hypothetical_protein	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0015	persistent	direct	high	257	0.996	GCA_001374975.1_04604
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	30959	31321	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	13410	13772	GCA_001374975_1_51_35	GCA_001374975_1_51_35	-	384050	.	.	hypothetical protein	MSRLALLLPAVLLVLLAGALLGGGLVARHYRPQLEEALGQLTASRVASGQLEALLDEQQRALAAVRASAERRAKDVEQALGEARAQAAEQYAAAVRLLQEPDIGVDCQAAGAAIDRELGL*	.	hypothetical_protein	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0016	persistent	direct	high	362	0.997	GCA_001374975.1_04605
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	31318	31947	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	13769	14398	GCA_001374975_1_51_36	GCA_001374975_1_51_36	-	384050	.	PDB:3WH1_A	Chitinase-	MKLTEQQLLRIFPNARLVAGVFVVALQRAMDEREIDTPARCAAFLAQVGHESSQLTRLVENLNYSAQGLAATWPGRYLGPDGQPNALALRLARNPQAIADNTYATRNGNGDEASGDGWRFRGRGLLQITGRANYRLVGEALGEPLEAEPWRLEQPVPAARSAAWWWAGHGLNELADRGEFAAITRRINGGLNGQAERLALWQRARAVLS*	common_virus_hmm	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0017	persistent	direct	high	629	0.998	GCA_001374975.1_04606
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	31980	32969	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	14431	15420	GCA_001374975_1_51_37	GCA_001374975_1_51_37	-	384050	.	PDB:3D37_A	Tail-protein	MQPSFRIVADGTDVTQRLNDRLLKLTLLDKPGMESDSLTLRLDDRDGQVALPRRGAVLEVHLGYAGEPLMRMGRFTVDTLQWAGPPDCLTVTAKAGDMRGSGKTIRSGGWEGTTLAQVCRDVGARNGWRVECPLQVAIARVDQVNESDYHFVTRLARQYDCTAKLAEGMLMVLPRQSGQSATGRRIEPLVLGRADVGSFDVTYDDRSLMRTVKTRYQLPGSGEVKSVELKNPKAPATATGEHVDRHLYASRGEAEQAAKARLASFSRSSASVRLELPGRGDLFAERSLLLQGFKAGIDGEFLIDSVEHTYSSSGWTTVVQCNGGRGGKG*	common_virus_hmm	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0018	persistent	direct	high	989	0.999	GCA_001374975.1_04607
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	33027	33233	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	15478	15684	GCA_001374975_1_51_38	GCA_001374975_1_51_38	-	384050	.	pfam05489	Phage Tail Protein X. This domain is found in a family of phage tail proteins. Visual analysis suggests that it is related to pfam01476 (personal obs: C Yeats). The functional annotation of family members further confirms this hypothesis.	MATTCRTADGDMLDSLCYHVYGHLLGCVEATLDANPGLADEQQPFRAGLLISFPDMPVVNVEQVRLWD*	mmseqs_cdd	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0019	persistent	direct	high	206	0.995	GCA_001374975.1_04608
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	33208	34080	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	15659	16531	GCA_001374975_1_51_39	GCA_001374975_1_51_39	-	384050	.	COG3499	Phage protein U  [Mobilome: prophages, transposons]. 	MAYLEQLQAGLRYLGRAGESGRKSLDKVVAPVNGAISEIRGAAAELENLPGVSPEMAARLQRAMRGIGQAQGKVNRVVSTYDRASRALLGIDERVDALKVQVNSAAQAVGKVAGDISPTLAGVLPSWLLAPSATPPSEAAAPLPHLLVLQPLTANAQPFYFNLNTAAFDALQRNSAYNWSGQVRLGRRPALQSVGMGEESILLKGAVFPLRRQVGNQEKVVGLEQLEALRRLAERREPLILSSGYGEVQMGLWCLVRISENQSALLGNGAPRKQTFDLEFKRYGDDLPNR*	mmseqs_cdd	nonviral_gene	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0020	persistent	direct	high	872	0.999	GCA_001374975.1_04609
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	34090	36327	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	16541	18778	GCA_001374975_1_51_40	GCA_001374975_1_51_40	-	384050	.	PFAM:PF04582.11	tail-length-tape-measure-protein	MSKDMDLVVSIGGIADPSLGKAFETVKARLDSLQERSRQASSLRDVLGDAIRLERELADMRKVGDRGVAEHARQLGERQEQLKRLGIEARAAGDAYARLGEMQRGLDMQVRGLQRLEQASQAMPLASAFSGLVVEASKTAAGYQARLRDLAIRNGLDVGREPALASLIQDSASQSGLGRTATLDMLEHLNATGMGFAAAQMNLGLAGRFGFGQGIASAEVAGLVRALQLAQGSDSPEQLSASLDRLVVLGKGRVGSEALARRLPALLSALGNAGEATAGDVGALGALLEIQAKNTTPDKADVRMKAWLEFVGSGSLKRAYGQDYDRDLEALRKDGASLLEANLELAARYRDKGGKLSAGVASPALEAYRASRGEFQGLLESQQSSAGSSERDARRREGMSQELWKASSDSWERAQTALGSALNPYLDNLAKGSAVLGESTAELLEAYPRTTAGLTAAAGAVLSGYLAYKGGRGAIDVLRGGRLGRRGIAAVGDLIERGAGRVSGGSEIQRVFVTNWPVPGGDSTLESARRPAQRKRGQTPRRKRGKGGGVKARSLPSLGFSAGGGLGAMAGKLPRLSRLPIRNAPLQVASSLIDVAEVYSSDLSESEKTIVYGEAGGSLAGSLAGAALGASIGSVVPVVGTLIGGLVGGAIGAWGGSELGGRLGRSLAGDPPADSDNKPTVPAPQAEPVAAAPNWTFAPQINLTVQGNVHEPQRLADELLPYLQRMLVDFADERQRRSLYDPAMV*	phrogs_hmm	hypothetical_protein	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0021	persistent	direct	high	2237	1.0	GCA_001374975.1_04610
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	36418	36528	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	18869	18979	GCA_001374975_1_51_41	GCA_001374975_1_51_41	-	384050	.	PF06528.12	Phage P2 GpE	MRQLARRLAIELGFQASELERMTLGDLLWWLAEGEE*	hhsuite_tools	hypothetical_protein	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0022	persistent	ambiguous	low	31	0.279	GCA_001374975.1_04611
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	36497	36841	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	18948	19292	GCA_001374975_1_51_42	GCA_001374975_1_51_42	-	384050	.	pfam10109	Phage tail assembly chaperone proteins, E, or 41 or 14. This is family of various Myoviridae bacteriophage tail assembly chaperone, or TAC, proteins.	MTQENRLPGWLTLDADAALVRLSRPAQCNGVSVDTLTLRAPTVRDIRLAGKVAGDDAEERELQLFASLAQVSRQDLEGLKLSDYQRLQGAYFRLVQDDTDDTFAYASTGEAPGH*	mmseqs_cdd	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0023	persistent	direct	high	344	0.997	GCA_001374975.1_04611
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	36856	37359	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	19307	19810	GCA_001374975_1_51_43	GCA_001374975_1_51_43	-	384050	.	PFAM:PF04985.13	tail-tube-protein	MIPQTLTNTNLFIDGVSFAGDVPSLTLPKLAVKTEQYRAGGMDAPVSIDMGLEAMEAKFSTNGARREALNFFGLADQSAFNGVFRGSFKGQKGASVPVVATLRGLLKEVDPGDWKAGEKAEFKYAVAVSYYKLEVDGREVYEIDPVNGVRAINGVDQLAGMRNDLGL*	hallmark_hmm	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0024	persistent	direct	high	503	0.998	GCA_001374975.1_04612
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	37372	38532	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	19823	20983	GCA_001374975_1_51_44	GCA_001374975_1_51_44	-	384050	.	PDB:3J9Q_C	sheath-tube	MSFFHGVTVTNVDIGARTIALPASSVIGLCDVFTPGAQASAKPNVPVLLTSKKDAAAAFGIGSSIYLACEAIYNRAQAVIVAVGVEAAETPEAQASAVIGGVSAAGERTGLQALLDGKSRFNAQPRLLVAPGHSAQQAVATAMDGLAEKLRAIAILDGPNSTDEAAVAYAKNFGSKRLFMVDPGVQVWDSATNAARKAPASAYAAGLFAWTDAEYGFWSSPSNKEIKGITGTSRPVEFLDGDETCRANLLNNANIATIIRDDGYRLWGNRTLSSDSKWAFVTRVRTMDLVMDAILAGHKWAVDRGITKTYVKDVTEGLRAFMRDLKNQGAVINFEVYADPDLNSASQLAQGKVYWNIRFTDVPPAENPNFRVEVTDQWLTEVLDVA*	hallmark_hmm	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0025	persistent	direct	high	1160	0.999	GCA_001374975.1_04613
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	39030	41105	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	21481	23556	GCA_001374975_1_51_45	GCA_001374975_1_51_45	-	384050	.	PFAM:PF12571.7	tail-collar-fibre-protein	MTTNTPKYGGLLTDIGAAALAAASAAGKKWQPTHMLIGDAGGAPGDTPDPLPSVAQKSLINQRHRAQLNRLFVSDKNANTLVAEVVLPVEVGGFWIREIGLQDADGKFVAVSNCPPSYKAAMESGSARTQTIRVNIALSGLENVQLLIDNGIIYATQDWVKEKVAADFKGRKILAGNGLVGGGDLSADRSIGLAPSGVTAGSYRSVTVNANGVVTQGSNPTTLAGYAIGDAYTKADTDGKLAQKANKATTLAGYGITDALRVDGNAVSSSRLAAPRSLAASGDASWSVTFDGSANVSAPLSLSATGVAAGSYPKVTVDTKGRVTAGMTLAATDIPGLDASKLVSGVLAEQRLPVFARGLATAVSNSSDPNTATVPLMLTNHANGPVAGRYFYIQSMFYPDQNGNASQIATSYNATSEMYVRVSYAANPSIREWLPWQRCDIGGSFTKEADGELPGGVNLDSMVTSGWWSQSFTAQAASGANYPIVRAGLLHVYAASSNFIYQTYQAYDGESFYFRCRHSNTWFPWRRMWHGGDFNPSDYLLKSGFYWNALPGKPATFPPSAHNHDVGQLTSGILPLARGGVGSNTAAGARSTIGAGVPATASLGASGWWRDNDTGLIRQWGQVTCPADADASITFPIPFPTLCLGGYANQTSAFHPGTDASTGFRGATTTTAVIRNGYFAQAVLSWEAFGR*	hallmark_hmm	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0026	persistent	direct	high	2075	1.0	GCA_001374975.1_04614
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	41107	41640	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	23558	24091	GCA_001374975_1_51_46	GCA_001374975_1_51_46	-	384050	.	PFAM:PF09684.9	Tail-protein	MSSRLLPPNRSSLERSLGDVLPAELPVPLRELNDPARCEAALLPYLAWTRSVDRWDPDWSDEAKRNAVATSFVLHQRKGTLTALRQVVEPIGALSEVTEWWQRSPTGVPGTFEITVDVSDRGIDEGTVLELERLLDDVRPVSRHLTRLDLRITPVIRSRHGLAVTDGDTLEIFPWKQ*	hallmark_hmm	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0027	persistent	direct	high	533	0.998	GCA_001374975.1_04615
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	41633	42520	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	24084	24971	GCA_001374975_1_51_47	GCA_001374975_1_51_47	-	384050	.	CDD:COG3948	baseplate-assembly-protein	MIIDLSQLPEPEVIENLDFETIYQELLGDFREAMAGEWTAEVESDPVLKLLQLAAYRELLLRARINDAARAVMLAYASGADLDQIGAGFNVQRLLIRPAQPEAVPPVEAQYESDKSLRNRIQLAFEQLSVAGPRNAYIAHALGADGRVADASATSPAPCEVLISVLGVEGNGQAPEAVLQAVRLALNAEDVRPVADRVTVRSAGIVPYQVKAQLYLFPGPEAELIRAAAEASLRDYISAQRRLGRDIRRSALFATLHVEGVQRVELQEPAADVVLDETQAAYCTGYAITLGGVDE*	hallmark_hmm	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0028	persistent	direct	high	887	0.999	GCA_001374975.1_04616
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	42517	42843	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	24968	25294	GCA_001374975_1_51_48	GCA_001374975_1_51_48	-	384050	.	PDB:5IW9_B	Baseplate-wedge-protein	MIGMDRRSGLPLSGLAHLKQSVEDILTTPLGSRRMRPEYGSKLRRMVDMPVSEGWKSAVQAEVARSLGRWEPRIALSAVRVVAVVDGRVDLLLSGVFEGENINMEVSA*	hallmark_hmm	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0029	persistent	direct	high	326	0.997	GCA_001374975.1_04617
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	42996	43553	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	25447	26004	GCA_001374975_1_51_49	GCA_001374975_1_51_49	-	384050	.	CDD:COG4540	baseplate-assembly-protein	MSYVSAEHDRMLAAMILPCVVVAVDLAAARVRVRSGDWTSGWLRWHSLAAGKVRHWRAPSIGEQGVLLSPSGGVSMGTFIPGLYGDAGTAPDNSASSETWRFDDGASLSYDWAAHRYRVELPSGTVEVRVGASEVRVSDGAVSLKAPKISLEGPVEIAGTLTVSGDILGGGSIIDTAGNSNHHTH*	common_virus_hmm	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0030	persistent	direct	high	557	0.998	GCA_001374975.1_04618
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	43550	44065	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	26001	26516	GCA_001374975_1_51_50	GCA_001374975_1_51_50	-	384050	.	PFAM:PF08873.10	tail-completion-protein	MPEQAVTLEALYAAIEQVLRERLPEAQLIGFWPGVPENTPAVSLEIAELLPERDPGTGESALLCRLQARIMVPPGADRQAVSIACGIVRTLREQTWNLSLEPARFVRSAVDGSREELKSLRVWLVEWTQSLRLGDPEWAWEDQPPGSLMLGFDPQTGPGHEPDYFAPEALA*	hallmark_hmm	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0031	persistent	direct	high	515	0.998	GCA_001374975.1_04619
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	44087	44440	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	26538	26891	GCA_001374975_1_51_51	GCA_001374975_1_51_51	-	384050	.	pfam16085	Bacteriophage holin Hol, superfamily III. Phage_holin_6_2 is a family of holins classified as 1.E.20 in the TC database. The hol gene (PRF9) product (117 aas) of Pseudomonas aeruginosa PAO1 exhibits a hydrophobicity profile similar to holins of P2 and phiCTX phages with two peaks of hydrophobicity that might correspond to either one or two TMSs. Hol functions in conjunction with the lytic enzyme, Lys, a glycosyl hydrolase that breaks-up the murein in the bacterial cell-wall, causing lysis of the cell and hence entry of phage particles. Several members are annotated as pyocin R2_PP when encoded on the chromosome.	MGNEPQTLTEMPLWVLILLAALGGVSGEMWRADKAGLGGWALLRRLALRSGASIVCGVAVMLLALACGAALLFAAALGSLTAAAGAEIAVGLYERWAARRLGVCELPEEQSGDRGPH*	mmseqs_cdd	nonviral_gene	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0032	persistent	direct	high	353	0.997	GCA_001374975.1_04620
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	44900	45259	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	27351	27710	GCA_001374975_1_51_52	GCA_001374975_1_51_52	-	384050	.	.	hypothetical protein	MIKAIDEMLKLWAEEMHAPGSNGGGYAGGNLIAMLIASKGEVVRGHRGSRVILDRVAEVDRLVNRLPEELKNVVVEHYLNRDSFPEQKYRHCGCSRNTFYLRLHVAHQGIQDGLLRRVA*	.	hypothetical_protein	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0033	persistent	direct	high	359	0.997	GCA_001374975.1_04621
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	45307	45507	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	27758	27958	GCA_001374975_1_51_53	GCA_001374975_1_51_53	-	384050	.	PHA00080	DksA-like zinc finger domain containing protein	MADLADHANELVLARLDGLLAARPALAIRESAEDCEDCGEPIPQARRRAAPGCSRCIDCQDRHERR*	mmseqs_cdd	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0034	persistent	direct	high	200	0.995	GCA_001374975.1_04622
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	45710	45880	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	28161	28331	GCA_001374975_1_51_54	GCA_001374975_1_51_54	+	384050	.	.	hypothetical protein	MDGAPTLQVPERFPVAPAPKQSAPASSVADNRVRPCTHVKSLKGGWEVVELTPSAF*	.	hypothetical_protein	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0035	persistent	direct	high	170	0.994	GCA_001374975.1_04623
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	45965	46735	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	28416	29186	GCA_001374975_1_51_55	GCA_001374975_1_51_55	+	384050	.	PDB:2FJR_A	Repressor-protein-CI	MDKSTQIPPDSFAARLKQAMAMRNLKQETLAEAAGVSQNTIHKLTSGKAQSTRKLIEIAAALGVSPVWLQTGEGTPAARSAVSVADGSPLVLEPLHPWDSDTPLDEDEVELPLYKEVEMSAGAGRTAVREIEGRKLRFSYATLRASGVDPSAAICAQLTGNSMEPLIMDGSTIGVDTATTHITDGEIYALEHDGMLRVKFVYRLPGGGIRLRSFNREEYPDEEYSPEDMRSRQISMIGWVFWWSTVRHRRGPSLVR*	common_virus_hmm	common_virus	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0036	persistent	direct	high	770	0.999	GCA_001374975.1_04624
GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote	cenote	CDS	46835	47149	GCA_001374975.1	CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975.1_CTDU01000057.1	GCA_001374975.1|CTDU01000057.1	GCA_001374975_1_51	GCA_001374975_1_51@C1	29286	29600	GCA_001374975_1_51_56	GCA_001374975_1_51_56	+	384050	.	pfam11112	Pyocin activator protein PrtN. PrtN is a transcriptional activator for pyocin synthesis genes. It activates the expression of various pyocin genes by interaction with the DNA sequences conserved in the 5' noncoding regions of the pyocin genes.	MQPTIAPSTPIPRQETVELVYRIFGDVLVPLEQVRERWFRNLNKENFSKALACGRIALPVTTLDDSHKAMQFVALDHLAAYVDQRANQAGSARRAQPGADSIAS*	mmseqs_cdd	nonviral_gene	C1	29600.0	17550	47150	GCA_001374975.1|CTDU01000057.1@region_17551_47150@tool_cenote_CDS_0037	persistent	direct	high	314	0.997	GCA_001374975.1_04625