core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	85456	85914	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	1	459	GCA_001402725_1_10_79	GCA_001402725_1_10_79	+	134910	.	COG3393	Predicted acetyltransferase, GNAT family  [General function prediction only]. 	MIEIELSSPLAPELALLHERHTVAMHADTPPESIHMLPASALAAPGIWFYVLRFEGRPVGMGALKRIDAHHAEVKSMHVLSEMRGMGLARALVVHLVGEARRLGFARVSLETGSQDSFGPARALYLAEGFVECGPFEGYGHDPNSVFMTRAL*	mmseqs_cdd	nonviral_gene	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0001	persistent	direct	high	458	0.998	GCA_001402725.1_01485
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	86122	87318	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	667	1863	GCA_001402725_1_10_80	GCA_001402725_1_10_80	+	134910	.	PDB:1Z19_B	Integrase	MATLEMTFTKGALDKAAHTGGAATRYRDSRYPNLYLEVGARSKTWRFRKFWKGQNFTETLGTWPAMTVIEAAQTAAEFNTRIEDAGVIVRNDAPRNAPEITLRVALEQHVTKALDPRQRHVSEETAAGYAAMLRLHTPRWLDMPITDITRQMVNEKIKAMANKPTTASCLLRALGAIYGTQLAYRDDGYEHDPTYRVKGYEARTRELLFDEAKRWPAMEAISKVPNMTRRAAWLALLFTGFRMCNIRALRWQDIDFDEKMLTLGRMKNGLRRTFPLSDAALDVFRLTPRTHDQIVFEGRHYNKPITGLRQIDIDGNDVDNGGVLRPHDTRHLFSSAAAKAGLSGPVINWMRGDVTIMQGAAGRYMHDLGSHADANAIANQIVSKSAPALSVEDMLRRA*	common_virus_hmm	common_virus	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0002	shell	direct	high	1196	0.999	GCA_001402725.1_01486
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	87495	87728	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	2040	2273	GCA_001402725_1_10_81	GCA_001402725_1_10_81	+	134910	.	PFAM:PF12964.6	HTH-DNA-binding-protein	MTPDSLLAELRTAIEAQSFPEIMTPAQAAQFLGVSEDYLRDHRKRRSGPPYSQPASKIVRYMRSDLIAWLNRSRIAA*	phrogs_hmm	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0003	shell	direct	high	233	0.996	GCA_001402725.1_01487
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	87883	88281	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	2428	2826	GCA_001402725_1_10_82	GCA_001402725_1_10_82	+	134910	.	.	hypothetical protein	MNRQAKTKAWISEIEVYDQLGGHVLALQCQTPDLKPFELTLVFNPQSPRNSTRGHNWWLIQKMIGDGFAAEFEAVHFDAKALAAKVRNTFHWFRLDVDGKSIWLRDVRPCEPFALHDETAAILALEELFHVR*	.	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0004	shell	direct	high	398	0.997	GCA_001402725.1_01488
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	88271	89128	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	2816	3673	GCA_001402725_1_10_83	GCA_001402725_1_10_83	+	134910	.	PFAM:PF09250.10	DNA-primase	MFADVAAKMVPNGWHNIIPLTIDTGQKKPAVKWAAYQHEDIPLDTLREWYRGRMGRMPLTGMVFGECREIVALDIDLTDPALNRRITEIGGYDCGIQSEFVRVGNHPKYMAFFRGAVRSQKLNGVEVFGSSGQVAIFGTHPTTKKAYDWPGRSLLDVTPGDLPEVTQEQVTAWLDTIKPLLETRDHHGRKLGWTGIDELRESLRKDGIDAAQRAIIGLHDGSRHPTCLTVTAWLVSQGYSPEDIATFIENNFPAHLRTDDWRKLRPRIRQMAEDAVKKFFGEEKW*	phrogs_hmm	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0005	shell	direct	high	857	0.999	GCA_001402725.1_01489
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	89128	90840	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	3673	5385	GCA_001402725_1_10_84	GCA_001402725_1_10_84	+	134910	.	COG5519	Uncharcterized protein, DUF927 family [Function unknown]. 	MEDITMRTPENVPAEPLVITRYDLDSKTSIEIREDGVWFIESKVSKAGKAYDETVRVASSIIDIEGLVDPIDSEVDAGLLVRIDDRRATVKREDLIQAQDIGKWLAARKAYFNPKHLSLLARMFMETRPPEVIGYTRNGWQRNGAFVVGDTVLLGVGHVLKTEANLAVYDRRSTFDDWEREVLSRAQQKPAWLFAILVGLSSVLLEPLGIETGTAFNAYGPSGSGKTAALKAAAGCWGRPDASGCLKSFITTENALEGLFEGGNGIGLSLDELKTANKNILGQFAYLFGNGMGKERMKSNAEMQRRRRWLLNCIMSSEKSVEGIFEAMEQQQAAGMVTRLVDIDMTDWLPIIDGAAVNEFEAMLRMHYGTAGPEFVRRVVGMADLKERHGRAAQALYAGDDPKLGRAANAFAQLKLTGEVMGIDTAVVDQVWAQWSSEVREVFDDDLQIGRAVLAFIERNLRVSIMQLAEEDGDDDGSPFGQDEGEIGNSYKERDGWFDSEFVYLRAEAMAKIMDGFGRARLYGWLHLRGILHRPAKGDKWTVRVPRLAHRPSALRIDLTRLQDVVGSGE*	mmseqs_cdd	nonviral_gene	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0006	shell	direct	high	1712	0.999	GCA_001402725.1_01490
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	91493	91918	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	6038	6463	GCA_001402725_1_10_85	GCA_001402725_1_10_85	+	134910	.	.	hypothetical protein	MKTEYLVGSSWLTRDHMRNCDVYPEYLNRIATFEQRLGAKLVRPRHANWTFFGDLRGHRSHYTHLGFEWTDHPAAFDGGNMRYLVTQPYLGTQDWQTCPKIDLARHWAGVMGFDTFEALDPSLGFWNPPACHVFVLTKARP*	.	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0007	shell	direct	high	425	0.998	GCA_001402725.1_01491
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	92180	92449	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	6725	6994	GCA_001402725_1_10_86	GCA_001402725_1_10_86	+	134910	.	.	hypothetical protein	MTFSATLSGTTATIVLVNLNSTANLKIDGATNLGNELLAFVNDPSTAPVDNTPAYQVYPVETGLRITAMHGHIDLPWRWITPVANALNA*	.	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0008	shell	direct	high	269	0.996	GCA_001402725.1_01492
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	92453	93238	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	6998	7783	GCA_001402725_1_10_87	GCA_001402725_1_10_87	+	134910	.	.	hypothetical protein	MGDSTPEVKLAAAILAQAFSDMTTTDSRDGESADTAAVAAIRFLTDRAGTSAQWRNLWCAAVNLDGDRFAARVRKLLDGEIEPTVEMRGRAHISAFDKGIARARERWARIKPAAPKAPPTPARPPTIKRPSPPPAAPVTRPTIEPEDVDLRHVPDDPFFVSQSGHVVASRPWSDGERSRILGPLPPFHSKAGQLIWQISQRSRSGKSAIETLGHTTDAAIRMVKDTLPQCDVLWSAKGERLPDYQLNAGLRLYLKQLPKAA*	.	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0009	shell	direct	high	785	0.999	GCA_001402725.1_01493
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	93381	94013	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	7926	8558	GCA_001402725_1_10_88	GCA_001402725_1_10_88	+	134910	.	.	hypothetical protein	MSENEKQMAAFIEALKPHIQSLVEEQLGGFKKHAEKLLDEVQDAKRAAKADPLFEKLEQQERDRRRESLNLVTQPDGSVRLASGKGDHGNAVVLDRESARNPQKYREAKAAAAARGVPLVIAEDGIDPTIRNTDRREVMQSKVFTFDDRHEMVRWLRADMQTDSGLVNRRLAAEREGFKVRTFHTLDDLPAHARQKFEMMEAAANAQADS*	.	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0010	shell	direct	high	632	0.998	GCA_001402725.1_01494
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	93994	94395	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	8539	8940	GCA_001402725_1_10_89	GCA_001402725_1_10_89	+	134910	.	.	hypothetical protein	MRKLTPEDQACLEAARRIVCGDQDDILVFEDGSLLVHTAHFKLRPSRDATDALIIATAKVMKLHLRGVDLGDLREKLLGRDVSEDLADFANFVHEHLVSFSVEDWDAIRARAGWYAEFNVETALPDTDKAGDS*	.	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0011	shell	direct	high	401	0.998	GCA_001402725.1_01495
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	94397	94975	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	8942	9520	GCA_001402725_1_10_90	GCA_001402725_1_10_90	+	134910	.	PFAM:PF10654.8	DNA-binding-protein	MQGGNKNSGRRAVIDMRPDKQEIIKDIVLGRRTLTEIAKRIGVDYTTIQRYRDSKITEEMRRSIMAEQRIRQVEAETEVINQDRMDVATTYESLARRVEKLITKAEANEDDAFALAAMEGLRKVLRDIATMQGKLATALTVNVTLAEAKEWVTLRTILQEVCDEVPAAREPLLRRMRHHVLSVTREDAGVGI*	phrogs_hmm	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0012	shell	direct	high	578	0.998	GCA_001402725.1_01496
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	94956	95750	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	9501	10295	GCA_001402725_1_10_91	GCA_001402725_1_10_91	+	134910	.	PFAM:PF03354.14	Terminase	MRALAFDGFRQWCEQVERDLDPGAQMLHFLRQEVPSATEAEWYQVEALTSTASTLALNICRQAGKSSTLAAMGVRELQAGGTTIALCPAERQVRELTRKVQLYLRATDLIVERGTQSEIECNTGGRFIAVPASGATIRGYTASRLLVDEAAWIQDDESIITALLPMLTDNGTVVYASTPAGRNNFFARLFLDRKPNDGIHRITVPGTSIPRLASRVERLRQQLSATRFRQEVLGEFLADGTSYFDLSAIEQATNPQEGAVCPRM*	hallmark_hmm	common_virus	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0013	shell	direct	moderate	785	0.987	GCA_001402725.1_01497
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	95735	96463	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	10280	11008	GCA_001402725_1_10_92	GCA_001402725_1_10_92	+	134910	.	PDB:4IDH_A	Large-Terminase	MSAHVIPKLDLIYLPDGRVVNETNQDPAIPRVTGYSRFQIAADLGQANDYSAVVVIKDEALPIVDDGAVIVGPRKRTVVYADRFRGVSYVAVVDHLIRLTNAPPFGGKSELAIDGTSIGRVVSDMLWDQNIDHKAVQMTGGQDWTRKGRYVNAGKTFMIENLAVLFAAGEIRFAHDLPLRAEIEQDLASFTTQTTAAGNQIITQSRSAAGHGDLGIALIVGAFATQYLSNQVVGQFKLRGAF*	hallmark_hmm	common_virus	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0014	shell	direct	high	728	0.999	GCA_001402725.1_01498
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	96693	97127	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	11238	11672	GCA_001402725_1_10_93	GCA_001402725_1_10_93	+	134910	.	PFAM:PF09607.9	transposase	MLDEKEGGDVVVWGIPVITADNGRRIWPDELKAMAVKKIEAGTKIVTVAKEIGANESLVAKWVRAELPELPRRGRPQGKSASERNAPQFVEVMAPSEPVRATRQTGTPDTAACQIRIGDAEISVGGDFPAEQLAEILRAVRASQ*	phrogs_hmm	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0015	cloud	direct	high	434	0.998	GCA_001402725.1_01499
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	97124	97474	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	11669	12019	GCA_001402725_1_10_94	GCA_001402725_1_10_94	+	134910	.	NF033819	IS66 family insertion sequence element accessory protein TnpB. The IS66 family insertion sequence element encodes a DDE transposase TnpC, and two accessory proteins, TnpA and TnpB. It has been assumed that the TnpA, TnpB, and TnpC proteins are produced independently in appropriate amounts and form a complex, which acts as a transposase to promote the transposition of an IS66 family element.	MSYHTPSYRIYLATEPIDFRKGMDGLVAHVASQFQLDPFDGAIWVFRSRRADKLKMIVWDGTGLVLTMKRLDGKRFVWPKAQSGPMMLNQVQFDALFAGVDWRGIAVNAPRKPVIA*	mmseqs_cdd	nonviral_gene	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0016	cloud	direct	high	350	0.997	GCA_001402725.1_01500
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	97551	98651	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	12096	13196	GCA_001402725_1_10_95	GCA_001402725_1_10_95	+	134910	.	KOG2004	KOG2004, Mitochondrial ATP-dependent protease PIM1/LON [Posttranslational modification, protein turnover, chaperones]	MLRHKILLVKYPSDQTQKSIELRLSEHLKNLRRAMIHVELDAIRDEDPPRPTGPEVDIIIKLEDADCRKIARRAKRLIERREAASGLAHLRKEDRDRLAALRDGVNLIRLPSEHRADEIAAELHAEYPWMAPATEVVWHALRKSVREGWPGIRLPPLLLDGPPGIGKSTWARHLAAALRMPSMSVEATVENASFGVLGCQRGWATAGPGRLLQLILQERVGNPIVVIDELEKAGRVTGTNGGSYDLCGGLLPLLEPATASHWTCPYFQVPFDLGQVSWVMTVNATRPLPEPLLSRCPPIRLPHLTTRDLTGFARRQGARRGLSDVGIEVIVEAIEASAGPVQPISLRTVMRMIARAETLEAGPRQH*	mmseqs_cdd	nonviral_gene	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0017	cloud	direct	high	1100	0.999	GCA_001402725.1_01501
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	98703	98942	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	13248	13487	GCA_001402725_1_10_96	GCA_001402725_1_10_96	+	134910	.	.	hypothetical protein	MAFSFEDRARQKAEARARDEDRLARGEISAADLQKENAHFARALGGQNGPLRVGFPVKGKPGKRRYVEFPPNKLPKDDS*	.	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0018	cloud	direct	high	239	0.996	GCA_001402725.1_01502
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	99335	100537	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	13880	15082	GCA_001402725_1_10_97	GCA_001402725_1_10_97	+	134910	.	pfam13289	SIR2-like domain. This family of proteins are related to the sirtuins.	MFEKLPAGADAYEYWRQKLDDDMVAIGSVLAEMAFEWAWKEGRNHFPPEYYSSRVNKDIFLKHMVCGHIQTVTPRTKDVTGGDLEDELAAFAEIKPHAIITTNYDMFLEQVFDGYEPVSGQTILRYNTNSFGEIFHIHGDVSNPPSIVLTRADYDEWSEKKKYVSAKLLTYFAEHPVFIMGYGLGDPNVKSILRDIGELVAGEDGLIPNVYQIVWRPDRIERHPPDQAIFAVDGKEYRIRAIHTNEFDWIFRALKSQSALKSINPKLVRALAARTMKLVRHDIPSGAVEVNYETLEKVADEKDFLPTLLGITAVSNPNFSHPLTISQLAQRVGLPNWQALNKLIHRVREEKGIDLRSSDNRYQCRIKTGTKATSVARKWSHDAVSLFKKVAAGEKYDLAM*	mmseqs_cdd	nonviral_gene	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0019	shell	direct	moderate	1136	0.944	GCA_001402725.1_01503
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	100852	101853	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	15397	16398	GCA_001402725_1_10_98	GCA_001402725_1_10_98	+	134910	.	.	hypothetical protein	MTVFTLTRPTIYQAPKGLKFEEFKSLIPDSGRRRLLCTHGDFDTRAALLGTKIEDHWEPEVKETWMRNHAAIMKGLAYEFGENEIIEKSERFIEIDTKPMSIISYHNEFFAQVRSAYVMGHFYPSLVGACALGERILNHLIIDMRPMFQNTAEYQKVYRKNSFDNWDAPISTLEAWGILLPEVAKEFRELKVLRHRSIHFNKSTYETLRKDSISAVLHMRKIIDCQFGTWGIRPWFISGTKGSTFVAKDFELHPFVRTYFAPQFPYVGPLFGIRNFEGHGLEVMDVPDYGDGEWTDEEFAQQFNNRNEDKVIKEPPEMILAEDAPLFNKQPSK*	.	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0020	shell	direct	high	1001	0.999	GCA_001402725.1_01504
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	102139	102693	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	16684	17238	GCA_001402725_1_10_99	GCA_001402725_1_10_99	+	134910	.	.	hypothetical protein	MEHLNEFNQELLADIREESAVSGLDAQDLAFERMCSTLEAEGELETSDRIKYRGAASGKTLRIDGHGGDPRDAEGILSVVVCELFEDDAPVSVNAADVKKLFGHLINFVAACRRREFRDQLPLGTPEFGTATMIAEAWPAVSKVKLILVTNGAYNARTDAVLAGKIDDIPVTYNIWDLGRLHRV*	.	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0021	shell	direct	high	554	0.998	GCA_001402725.1_01505
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	102721	104253	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	17266	18798	GCA_001402725_1_10_100	GCA_001402725_1_10_100	+	134910	.	pfam10592	AIPR protein. This family of proteins was identified in as an abortive infection phage resistance protein often found in restriction modification system operons.	MNFADDFGGALPALAASGPETALPAYLAVINGRQLADLYDKWGARLLESNIRSFIQARRKSVNEGIRDTIKGEPEMFFSYNNGLSATADSVETVVDGAGVRILSAKNLQIVNGGQTTASLHAARKHSPDALANIHVQMKLTVVPAEASEQVVPNISKFANSQNKVSAADFFSNHPFHMRMEGYSRRVFAPPAQGASRQTRWFYERARGQYQVERNKLGTADRRRFDNEHPKSQLFSKTDLAKVELSFRMKPDTVSKGAQKNFAAFASDIGEAWSASDRKYDETWFKRLVAKVIIFRALERAIPKQEWYPGGYRANIVTYGIAKMVQDADEKGKLLDLDSVWNAQQVPDVMMAALLASCEAAASVITVPESGIRNITEWAKKQACWAAVMRLEVDHAENFDDCLVEPQDANAAQRDGRREAAMVSGIEAQAKVIEHGGAFWERLRQWAAPNRQFSLKDDGILKACAQQDRRLPSERQCVGAVEILGRARAEGYFDIEETPRIRISGGSRVH*	mmseqs_cdd	nonviral_gene	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0022	shell	direct	high	1532	0.999	GCA_001402725.1_01506
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	104275	104718	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	18820	19263	GCA_001402725_1_10_101	GCA_001402725_1_10_101	-	134910	.	cd10016	N-terminal domain of type IIE restriction endonuclease EcoRII and similar proteins. N-terminal domain of type IIE restriction endonuclease EcoRII and similar proteins. Type II restriction endonucleases are components of restriction modification (RM) systems that protect bacteria and archaea against invading foreign DNA. They usually function as homodimers or homotetramers that cleave DNA at defined sites of 4 to 8 bp in length, and they require Mg2+,  not ATP or GTP, for catalysis. EcoRII is specific for the 5'-CCWGG sequence (W stands for A or T). EcoRII consists of 2 domains, the C-terminal catalytic/dimerization domain (EcoRII-C), and the N-terminal effector DNA binding domain (EcoRII-N). To be catalytically active, EcoRII has to form a dimer.	MSTQTFIKTLSANDVGTTGGHMGGILVPRGDGQLLAFLPPLDPGVLNPDAWINCVTPDGEVLRLRFVYYNNRLHAPTGTRNEYRITYLTKFLRDAGAKEGDTFEISKDDDAGTYRIRVISREAAMPEPTDDDGPVRIRLTTGWRRVH*	mmseqs_cdd	nonviral_gene	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0023	shell	direct	high	443	0.998	GCA_001402725.1_01507
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	104715	106535	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	19260	21080	GCA_001402725_1_10_102	GCA_001402725_1_10_102	-	134910	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MIDLAAQPPSFEAMATSVPDGFSVSERILEPVILIGREDGRIQVRLGGRRVVRGEEKVFVAPSPGHAWVADGNVLRPIPADAPALLSRMLGGEPAENISYPTAIRLLRACSDEIAVQAAPDVLHAGKLAAEELSAEVDIPGLHADLFPYQARGVQWMWETVNRTGGLILADEMGLGKTLQIIALLLLDPPEKTAPALIVCPTSLIANWVREFQKFAPGISIMVHRGAHRAGIYRDLQVASVVITTYETMVNDVSIFSSFEWSWVICDEAQAIKNPHSNRRKAIVTIPRRHSIPMTGTPVENTLLDLWSLADFAIPGMLGDRTVFEAEFPDTVEAGKALGALTDPVILKRRVRDVAADLPERIDIDLPVELDDRLARHYDDVREATLQKYPVAGALVATLQLQLVCAHPWLRVPDAETADWDDVKIVTHDELPLITPKMERVIDLLREAFQNGRKVIVFALFNRIGDLLRQACKDFTGVHWGAINGSTPQQERQAIVDAFTEFDGAACLVLNPKAAGAGLNITAATVVIHFTPVWNPALEAQASARAHRRGQTEPVTIYRLFYKNTVEEVMLERSAWKSDLANETVPVSSRDADDLKRALEISPVRT*	common_virus_hmm	common_virus	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0024	shell	direct	high	1820	0.999	GCA_001402725.1_01508
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	106532	107365	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	21077	21910	GCA_001402725_1_10_103	GCA_001402725_1_10_103	-	134910	.	COG3183	Predicted restriction endonuclease, HNH family [Defense mechanisms]. 	MLSAQQELIRKELENGTGAAIGMRVDPTGTRTRLSIWFSDLDERHGPVAELRPVGLKGYQVTLGFGTFAGDVVRQIRAASDEDVRLAQALLGSIPSSIELDLGGQDVTSWRVETGQTKVIATARRLPQEPEAALTAMCKDAIVPMMAAMAELIGYDVIEAEDEAEGEFEGAILLSTVRRRERNPRNRLLCIRLHGEKCACCGFEPRQAYGAAGGIIEVHHLEALSLLSAPRPYNPATDLVPLCPNCHRAVHTRRPAPYSLEEIRRLLGLGDAREVNG*	mmseqs_cdd	nonviral_gene	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0025	shell	direct	high	833	0.999	GCA_001402725.1_01509
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	107367	108995	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	21912	23540	GCA_001402725_1_10_104	GCA_001402725_1_10_104	-	134910	.	pfam13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. This family represents, additionally, the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.	MSDLINNPNAARLIYGLRDTGYNVKTAAADIIDNSIAAGATEINIDVQMLTGGRKIVSFGDNGHGMDAAGIRDAMRYGANKRPDPKSLGKFGLGLKTASTSVCKRFSVISRKSPDADLAKYTWDLEHVAAQNAWEMLAPPVTADEIDLFEDLCGPTGTLVVWENCDRILSKDYMDETKEKAALKRMTEALSRHVSLVFHRFLDVTDKREKDVVIRIDGTPAKPWNPFYPQRSEQVLAANKQKLIVELPDGSEETAGIKAWILPHRRDMEKDEEAEFARITNRAQGFYVYREGRLIQDGGWMDVFGPPEPHTSLLRIEFDFGHELDDAFSIDVKKSRILFHPDLGDGLEKFLSPIRREAEARYRRISREDANKKNTVDHSSANKNIANTPNTAKPQVAGVDVATQTAEVNNNRGVKIRIKAPIQNDVSPDSIHVEAVTTITNGHLWEPAYRSPGASGHVPGVILNKHHDFYQKIYQRAAANGYAVEGMDLLLYAFAMAEQNNTDPELEPVFEDIREEISSNLRKLLRNMPDPEPSELTEADED*	mmseqs_cdd	nonviral_gene	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0026	shell	direct	high	1628	0.999	GCA_001402725.1_01510
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	109493	110569	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	24038	25114	GCA_001402725_1_10_105	GCA_001402725_1_10_105	-	134910	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MDQTQTNSFRFIDLFAGIGGLRRGFDAIGGQCVFTSELNKYSQMTYRANFGEDHEIAGDITKVDAADIPEHDLLLAGFPCQPFSLAGVSKKNSLGRAHGFADETQGTLFFDVVRILRHHKPKAFLLENVKNLLSHDRGNTMRVILHALDELGYEVDHKVIDARSWVPQHRERIFIAGFRRDHKTTFSFNDVSIPAGPNPTLSSILHPEDGSEAPDAHFTVGPEAKVSDRYTLTDGLWSYLQRYAAKHRAAGNGFGFGLVGPDSVARTLSARYHKDGSEILVAQPGKNPRRLTPRECARLMGFDRPGSNDPWKIPVSDTQAYRQFGNAVAAPVSVAIAEAMAPWLGNVIAIRGRRNKIA*	common_virus_hmm	common_virus	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0027	shell	direct	high	1076	0.999	GCA_001402725.1_01511
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	110814	111200	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	25359	25745	GCA_001402725_1_10_106	GCA_001402725_1_10_106	-	134910	.	pfam18478	PIN like domain. This is a bacterial domain of unknown function suggested to resemble PIN like domains.	MLDENLPPAMAKALAALFVNEHQIIHLRDRFGSGVTDIAWMTELARDGAWVILSADRRISKNRSEKRVFTESRLIGFFFAPSLQKAPTLKKMERLMAVWDTIEKQVPLVRGGSMFEIPGKGNLLQPIA*	mmseqs_cdd	nonviral_gene	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0028	shell	direct	high	386	0.997	GCA_001402725.1_01512
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	111206	111910	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	25751	26455	GCA_001402725_1_10_107	GCA_001402725_1_10_107	-	134910	.	5AF3_A	VAPBC49	MTAHKSPHEFVGIGLYTIDEAAKLLKSPTRTVRRWLLGHDFKARNGETRHSPPLWATDLPHADGAAELSFRDLVELRFVRAFVEMGLDIRIVRSCLETARECIQSDRPFSSGRFRTDGKRIFLQSLEQDDTPVLIDLKRKQFVFHQIVERTFKDLDLEDDIVTRWRPFHGRASIVVDPKRAFGQPIAAESGVPTIVLAEAVVAEGSVTRVAALYEVDRAAVQDAVTFHKELAAA*	hhsuite_tools	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0029	shell	direct	high	704	0.999	GCA_001402725.1_01513
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	112106	112816	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	26651	27361	GCA_001402725_1_10_108	GCA_001402725_1_10_108	-	134910	.	.	hypothetical protein	MINLPESQKAAISAINADLLRGSIEREIERRGAGALSEYSLWQCGEFIEGKRQIFAKALDTFRQAKSQAKTERTEREARKAGDDILYAVSMMKARVLEEERDALLFVVDDYVGRPLINRDELKVGIGYRWRASAEDEWKFGHITFLHKSTPWPHLGSQTSPRKVSKAQQARENENRLEKEWDDMVLNALCSVRDFFRAGGDGKDIPAEFRAIPSRFGCGLDNHSLKFWGDRYKSQP*	.	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0030	shell	direct	high	710	0.999	GCA_001402725.1_01514
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	112934	114184	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	27479	28729	GCA_001402725_1_10_109	GCA_001402725_1_10_109	-	134910	.	COG3174	Uncharacterized membrane protein, DUF4010 family [Function unknown]. 	MDTLPILVPPALNLVSAIAVGALIGTERERRKGEGPARSPAGLRTFAIASTAGAVAFSLGGAVLLAVVAASVAGLLAVSYGKRPHQDPGLTTEIVLLLTVLLGGLCIPAPQMAAAIAVTVTVLLHLKAWLHTLVTTLISKDELDDALIFAAATLVILPLVPDRPMGPWLALNPHSLGIVIVLVMAIGAAGYLAVRVFGARFGLPLSGALSGFVSSTATIGAMGARALQSPEMRAACVAAAVLSTVATVLQMALVLAAVSLPTLRQLILPLVFAGFTAVAYGVVLTLAAMRHPAPETPGPGSAFSLKTALIFGTVLALVLILAAGLQANFGGSGVLLAATVAGLVDTHASAISVATLVAAGKVAPEAAAVPILAGLSANTATKILVATISGGRSFALRVVPGLVLVILAAWAGSLLM*	mmseqs_cdd	nonviral_gene	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0031	cloud	direct	high	1250	0.999	GCA_001402725.1_01515
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	114616	117696	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	29161	32241	GCA_001402725_1_10_110	GCA_001402725_1_10_110	+	134910	.	PFAM:PF13884.5	tail-fiber-protein	MARNMTTQLSRIAPEGDRARSGLTGVARHLLSVSVIALLFGLSPAAAQFRIDRAGEVTEESSGVIQSTVGYLADTTTGGGDNLGDHIATQGLNMAGFGISGILTPDGSDPGAGVNVQYVEDMFGAYTPPEPDLSDYVTKSGMPQTITSAKTFDGPVLFSDDVQVTKVPASTRDVTNKAYVDDAIDDLVTLTTNQSVSGDKSFTGSVAVRTPTGDMGAANKLYVDNAISAAGGSYVTMGTNQIIGGTPITGAKGFTGAVTFGGEVNVTSTPDDANDAVNKAYVDNLTDGLAGRVTVLEGDVTALTASVTTLQGNVVSLRSDVTTLQGDVSTLDTRVTNLANRTITAGSGITASGTLGGGITVSVDPTVVRTSGNQTLAGVKNFSSLPTVPTAAPTLAGQVASKAYVDAQVAGAVGTTYAAGDGLSLAGTTFAVNGTVVRTTGDQTLAGVKTFSAPIAGSITGNAATATKLAAAKTINGVAFDGSAAITLPTVNTTGAQAVAGVKTFSDIPVIPITAPTVAGQVASKAYVDAQVASAEGTTYTAGSGLSLVGTTFAVDGSVVRTSGDQTLSGVKTFSAPIVGSITGNAATATKLAAAANINGVAFDGSAAIALPTVNTTGAQTVAGVKAFSSPIVGSITGNAATATKLVAPSAINGVAFDGSAAITLPTVNTTGAQTVAGVKTFSSPIVGSITGNAATATKLAVAANINGVAFDGSAAITLPTVNTTGAQTVAGVKTFSSPIVGSITGNAATATKLAAAANINGVAFDGSAAITLPTVNTTGAQTVAGTKTFTGTLTGTGTVNLPPATYIPAMGTTSTAVANKAYADTKVSLTGNQAIAGVKDFAAFPTVPIATDPTADNQVVSKKYADSLAFNITRRLDLGNIRMLIPAVKGDGATSNMYKNYYTSDRSMTINVGNPPSGYEWILKATLSSAAPITFSATRYFKALPGDVITSDGSSLHFNSNPWTTSALAQNGNGLYITDPLNRSVSGHFIEANSEDPLIISGKPSLGDVNGIYYSGSLELFLSPI*	phrogs_hmm	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0032	shell	direct	high	3080	1.0	GCA_001402725.1_01516
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	117614	117829	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	32159	32374	GCA_001402725_1_10_111	GCA_001402725_1_10_111	-	134910	.	.	hypothetical protein	MKLEVGAKTGTDGGEKIFERLAQRNGNPLAHGLSMSSVVDNSQFFRSETEKAPSSQNNKYRLHLRVRVSQK*	.	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0033	shell	ambiguous	low	84	0.389	GCA_001402725.1_01516
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	117988	119952	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	32533	34497	GCA_001402725_1_10_112	GCA_001402725_1_10_112	+	134910	.	COG3593	Predicted ATP-dependent endonuclease of the OLD family, contains P-loop ATPase and TOPRIM domains [Replication, recombination and repair]. 	MKLIKAHATNYRNIIDSNPVEIGRSTCLVGKNEAGKTAFLKALECLRSTNSEFKSYGKTENYPRRYLSEYDSKHEDGDAVVMRTEWELEPADIKAMEATFGEGVLNSKTITIQKAYDQDNATWSVPLDEEKVFDNLVKRFALDQADRGPLVAAKSTKAAMKILEALPTPTERQTELLAAIKKFRDGSANLHAIDTLNARTPKFLYFSHYDRMSGALSINKMNTDKQHGIPLESGDRVFLDFLEYAGTTIDELAALDRFEELNAKCEAAALRITEQIFEYWTQNDDLEITVVLSEGKAADPAPFNSGPVARARVKNKLHGVTVPFSERSAGFIWFFSFLVKFAQIKKSHGNVILLLDEPGLTLHGTAQKDLLRYFAEQIAPKHQLIYSTHSPFLVPADDLSSVRTVEDVVVRDDRGRKQSKGTKVRSDVLTTDPQTNFPIFGAMGFEVTQTLVIGKNTLLVEGPSDILYLQAASAALKAAKRTHLSAHWAICPSGGIDKVLPFVRLFYGNKLNVAVLTDFDRGQKRKLEDLHKSALLENERIILATEIAGKDEADIEDFFDPRLFVDLVNKTYQLGKAHQLTVKKLMDADATTERLVKKAEAYFRVLPPQCPEFSHFDPSVYLLQHPELLSGTDDQVVKTLERFEAAFERISKLI*	mmseqs_cdd	nonviral_gene	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0034	shell	direct	high	1964	0.999	GCA_001402725.1_01517
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	119964	120629	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	34509	35174	GCA_001402725_1_10_113	GCA_001402725_1_10_113	-	134910	.	COG2135	Putative SOS response-associated peptidase YedK [Posttranslational modification, protein turnover, chaperones]. 	MCGRFVDPNLRNTEVDMSQIKLDPFGARFNVKPTETVVILAKSPLIAMEARWGLIPSWFGGDSPKAWKAATFNARIEDAREKPAFRQVWRHGRCLVPVGGFYEWSGPRGARQPHFFHPAGNEANLYLAGLASRWRDLLTCTILTREATGAMAGLHHRMPVILNADERDAWLGGSDDVAPLGTGVKLACHPVAPFGLQDDGPELIEAINLQGGTQSFVRCPS*	mmseqs_cdd	nonviral_gene	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0035	persistent	direct	high	665	0.998	GCA_001402725.1_01518
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	121423	121650	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	35968	36195	GCA_001402725_1_10_114	GCA_001402725_1_10_114	+	134910	.	.	hypothetical protein	MNGEAKNEEKDGKGIKCLFINDFFRFERSRAMTLPDPRPHPGDRNDLHLSPENENAGMLAHPDVDVMWKAEAHQH*	.	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0036	cloud	direct	high	227	0.996	GCA_001402725.1_01519
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	121865	123610	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	36410	38155	GCA_001402725_1_10_115	GCA_001402725_1_10_115	+	134910	.	PFAM:PF03050.13	Transposase-IS66-family	MADKDQTDKPLKDEILPPEDTAPLIAQETVQTEETVEGELSPMGEIITEITDLLAALPGDCAEIKHGIEECLIGVHLEFEDVVSRESIARRQIATLKRSLRQEKEQAKLLRHKIFVGGSDNNYQDIEDGTLDLPDDDIDEEEETPKARKGKQKRKMPKDIKTIEIKHYPEQTHCPCGGELKEIGHWISTLLRVIPEHYVWEKHIYFRCACNRSAACKEHKPVSAHAEGFIGRRRTITPRTVVEAVCQKFYEHSTHYRQRRRLDNAGFNVARQTLSRNATHIAGFLEPVCDEIWRHVTSGHAAHMDETPLRTQAKGGCETTWLWGLCRDERGWNKEAEPAVYFEHDASRGGHVAERMLEGALIDTLQIDGWKAYNRIRRVPGQNDGVEIARCMAHARRKFTDSQKAAPSTLAKRVIKGLKAVYEVEERVYGCPPEERQALRLAEALPVLEKIRADLLRVQPDLAKGSLKTAVNYFLSGWEDLTRYVYDGRLAIDNNPVERCMRGIALSKKNSLFAGNLMAAKNWAIFYSLIETARLNGVDPFRYLSWVIDQIEKGRELTDYSQLMPWHYKAANEAPSQGKAA*	common_virus_hmm	common_virus	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0037	cloud	direct	high	1745	0.999	GCA_001402725.1_01520
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	124279	124380	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	38824	38925	GCA_001402725_1_10_116	GCA_001402725_1_10_116	-	134910	.	.	hypothetical protein	MFTRRPPALPERPFPLVLRALALIVTGPKAARP*	.	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0038	shell	direct	high	101	0.99	GCA_001402725.1_01521
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	124542	125810	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	39087	40355	GCA_001402725_1_10_117	GCA_001402725_1_10_117	+	134910	.	.	hypothetical protein	MNASTEKETRGAWIVHHARKITMDVSAPAEYSALDEAGKAAELLMRLGASAESNLTTDEVSAIARAANLNARTELPHYLNLLKQRRLIDTSNSEVQVLGVNARSVLRHASDIFEDANPSNSEIAAIELGEVASRAPILRSDAAQYFGDTYKMKSADASEFIRRAGEIGFVDQEGDDPSNVLLFNGNLFKRDSVGKAAKVLSSLGSAEQAKLVELNGLLSSSGCMLASRCENILGNQLFEKLKAAGVLEVNTVANEQGDHAFVTLPGAFHKFVNPLIDDSFDMAKALVSALAYGLHLRPSSQGRIVSVDWILGALIAGRTIGPATAIANDYRILEQNRVVQLIPAHSGMYRMKLLKREVGELALQVLKRGDANAETIQTPPSAPITGYVGPERTREQARKHQSKPSRQQTHDILSALRGGRGL*	.	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0039	shell	direct	high	1268	0.999	GCA_001402725.1_01522
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	125810	126958	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	40355	41503	GCA_001402725_1_10_118	GCA_001402725_1_10_118	+	134910	.	.	hypothetical protein	MGERKDQKGFRLEELLRAYFIRAGVYAVRGVPLKFDGDDLTDIDIWLYERPTGSSRRRQIVDAKSKTKPKAIERLLWTKGLFELLDVDGAYIATTDTRPLLKDMSRRLGISVLDGSDIKRMAESDKVVFPDRLAEEEIDDAIRRRDTDRRNKYLQTGYSDLKGALIDNFGGGTANRALEHVHRFSNELVASHPNSPSAEICLRLTYIAASISAIAIDAALSKVSFKSTDERRHAIINIIRYGDEDEARGLEKVRIATALIERYAPNGGALSQTVAQAVRKDYAKIPAEIIADHVVGNIRADGLFRIARSLDLRAFNRQLLGFDDLSQEEKAFIGVLVDFVDCDRAAVAKSWTPKPSVKPDATKSGIEVVDELGPLFDNRKGE*	.	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0040	shell	direct	high	1148	0.999	GCA_001402725.1_01523
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	126978	127493	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	41523	42038	GCA_001402725_1_10_119	GCA_001402725_1_10_119	-	134910	.	.	hypothetical protein	MGRDGREPANMPPDWLDELAKLGAAERPLSSDDMTGGVPPERFRRHLALSAWKYIADYGSAKEPLPDWVIGYLKAVAKHIASNLGPKGALSREDASSALGIDGKAWPEHSPIVVYLAMQEWIDGEAWPDVTGPAAAAKLYIQERMAGDRDALASTVIRLYKEGKRLWLAEG*	.	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0041	shell	direct	high	515	0.998	GCA_001402725.1_01524
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	127579	127932	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	42124	42477	GCA_001402725_1_10_120	GCA_001402725_1_10_120	+	134910	.	.	hypothetical protein	MTTELVASILTTVPDDCGGMTDSIVDPVKAEMEAYDRDVKTAERVLFDIRAGGEVEIMYDPMTGWEMSGEDVSVYMPLETAERAVNMILRRLTRHYRKLSALRGNPDLFDMMQLEPK*	.	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0042	shell	direct	high	353	0.997	GCA_001402725.1_01525
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	128170	129375	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	42715	43920	GCA_001402725_1_10_121	GCA_001402725_1_10_121	-	134910	.	PDB:1Z19_B	Integrase	MRGKIREGTVTLEHIQTVHAGGKIYRYLRIPGQPRVKLPDLPLDHPEFLAAYAAARAAAPKQVRATTGTIAALCEAYLRSDSYLAHSANYRATLRRHIEAIREQAEDALASHLRADDIADDLAPLKPNVAGARLKAWRAVCKFGVEKRLLKSDPSHAVIKPKAPKTDGHPPWSAAEIERFRARWSIGTVPRACFELLFWTGARISDAVRIGPGMVGRDGVLAFRQQKTGDEAFVPWACPLPAYAEGMIEDRDTMHAAIACLGGHMTFLATHGGRTRSHKALGTVIADAARSAQITGRSAHGLRKSRAQQLAEAGATTHQIAAWTGHQSLSEVQHYTESANRRAAVTGTEQDRNSVKRSDLPVKTRNTPCEPKWFLRRGDPGRTRTPDPLLRRSLVYVPNRL*	common_virus_hmm	common_virus	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0043	shell	direct	high	1205	0.999	GCA_001402725.1_01527
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	129345	129587	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	43890	44132	GCA_001402725_1_10_122	GCA_001402725_1_10_122	-	134910	.	6AMA_Y	DNA binding domain-containing protein, excisionase	MGKHEPHFVPRLLPAPEAALYLGVSQTTLRGLDIPRRILGAKRLYDRYDLDAFASALPIEGDAIESEVVNTCAGKFGRAR*	hhsuite_tools	hypothetical_protein	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0044	shell	direct	high	242	0.996	GCA_001402725.1_01528
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	129702	129953	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	44247	44498	GCA_001402725_1_10_123	GCA_001402725_1_10_123	-	134910	.	pfam07505	Protein of unknown function (DUF5131). This is a family of bacterial and phage proteins of unknown function. There are three highly conserved cysteine residues in the disposition, Cx6Cxxc, amongst many highly conserved residues.	MHPDWVRSLRDQCVSAGVSFHFKQWGEWAPAIGIAVTHRWIGNNYLHKFNGGPVVGPGMARIGKRAAGRLLDGRTCDEMPGGA*	mmseqs_cdd	common_virus	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0045	.	unmatched_CDS	none	0	0	.
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	130260	131420	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	44805	45965	GCA_001402725_1_10_124	GCA_001402725_1_10_124	+	134910	.	PFAM:PF03354.14	Large-Terminase	MSATEALPRFACPDWWERMQQGLPPMASVPVNEERAQKVVTFFNRLRLPDVAGAPSLADACGDWFRDILVAFLASEDPQTLQPIVWELLCEVPKKNSKTTYAAALGLTALYMEDAPNRKMLLVGPSQAIACRCFDQARGMIDVDETLKKIFHVPDSDTVITRRKTGTSLAVKTFGTAIVTGEIPVLTIIDELHELGKVPRAAAVMQQIRGGGITKQRGKLLMITTQSDESPAGVWRTELDKARKIRDGRAGPSPIMLPVLYEFPLELQHKQEFWRDKRNWGLVLPNLGLSIDPQALADDYDNNGKATKHAEQIWASQHLNIEIGVGLSAGWLGAQYWEGCVETDLTLDELIERSEVAVQGIDGGGLDDLFAEAVIGRCRETGHWLH*	hallmark_hmm	common_virus	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0046	shell	direct	high	1160	0.999	GCA_001402725.1_01529
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	131445	131957	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	45990	46502	GCA_001402725_1_10_125	GCA_001402725_1_10_125	+	134910	.	PFAM:PF03354.14	Large-Terminase	MFKERPEIAPRLLNFVEDGDLIELGDDDTSGDVRRVAETAARLSAAGLLPQQGAIGVDTTNSAAIQFQMFGAGITYEQLVIVGQDWRLSPAIWGLERMLKQGTFRHCGQPLMAWAAGNAKPEIKGSAVRITKEIAGKAKIDPLMATFNAIMLMLRDPVAAGPQEFEYTGM*	hallmark_hmm	common_virus	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0047	shell	direct	high	512	0.998	GCA_001402725.1_01530
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	131960	133243	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	46505	47788	GCA_001402725_1_10_126	GCA_001402725_1_10_126	+	134910	.	PDB:3KDR_A	Portal-Protein	MGLMRYFRTGAAAPAPVAARVEPPLVASAPAVQSESQWRGFSVGSGVSKAGVRVDERTALTIPATLQALRIISGVFAMAPLHMYGRTPEGRTRLDDHPAEILLAERPNAHQSPFALFELIMSDLLLAGNFYAYVSLNARGEPVALTRLRPGSVVVAEYFDRAEGQILFYDATLPDGSRERFAARNIWHIAGLSRDGLIGLNPVQYAREALGGALATSEHAHRFWSRGGKPSTVLTTEQKVSPEDKTRIRADWERLHAGLEGSATAVLDQDLKAAFLSHNFKDSQFLETRQFQVVDLARIWGVPPHLIFELSKATFSNIEQQSLEFVTYHLGPHFARVAGAATRQFGGNGTYFEHLTDALVRGDLKSRMEAYWLQRQMGMVNANDLLRRENQNNLPGEAGTEYWRPANMALAGQPVTPAQNQGASDAQ*	hallmark_hmm	common_virus	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0048	shell	direct	high	1283	0.999	GCA_001402725.1_01531
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	133233	133844	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	47778	48389	GCA_001402725_1_10_127	GCA_001402725_1_10_127	+	134910	.	cd07022	Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.	MRNEAAALIAAIRAQPWAIMPEYLEAIEAIAVRALAADVLQLLARDGHAERMPANLEAVAAVGTRLDGSRGSTIRNGNAVVPMIGTIFPRASMINASTGGTSLDALMHDVRVAEASADVERIVMVIDSPGGVVSDVGAAADMLRAITKPITAHVAGMGASLAYWLGSQAAELVLDRAASVGSIGVVATTTRQEGADARLGSRA*	mmseqs_cdd	common_virus	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0049	shell	direct	high	611	0.998	GCA_001402725.1_01532
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	CDS	133681	134907	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	48226	49452	GCA_001402725_1_10_128	GCA_001402725_1_10_128	-	134910	.	PDB:1Z19_B	Integrase	EVITKREFKRKLGDSQKEALAAYPQYHAQVERVIDAAKKRMAGAVAASGPSASEREAYAEALRRRADLVARGATEEVLELAADSLADSFPQEGYEPVGAPPVDRHTVNLLRLGPERYRPPEPTLGDALRLYLKEHLKADSPETDSRVTGLATRVVEAAIAAIGRDPLLTAITREDARAVRDHMLDRVKATGRGAGGKVSAATVSRELSILSAVINFAKVEFGMPDTMPNPFSRLPVARVAKGQGQKASEKRDPLPPTVLTKTRARVLANAAPELALIWRMDLPHAARSRRCCRNSGDAAVRVPSSRRGGTALMAHWPYNTSKWARLREAKLAETPLCEICARRGEIEDAVAVDHFKPVNQGGHPRLLAASLWQQPRSSQRRRHGQEQALPPAIQANRPAMPPCPRHER*	common_virus_hmm	common_virus	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_CDS_0050	shell	direct	moderate	1107	0.902	GCA_001402725.1_01533
GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote	cenote	CDS	1	530	GCA_001402725.1	LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725.1_LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725_1_18	GCA_001402725_1_18@C0	1	531	GCA_001402725_1_18_1	GCA_001402725_1_18_1	-	25957	.	PFAM:PF03629.17	tail-protein	MTTGVNTTNLVTAALLDSVLGNRNGTSAKASIADLAAQLAASGALADRLNDLDAAMAGKPFVIFVAGQSNAARRVAYAPFSPPPNLYMWSYTGTALSAAAATTTIGTFQTGAAIAGTSNWGTMIGARAAIEYPTRPVFVINISRGGIPIAQWDAAAADPNMWTATLANVPAALAEIA	phrogs_hmm	hypothetical_protein	C0	7249	0	7249	GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote	cenote	CDS	539	2068	GCA_001402725.1	LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725.1_LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725_1_18	GCA_001402725_1_18@C0	540	2069	GCA_001402725_1_18_2	GCA_001402725_1_18_2	-	25957	.	COG4733	Phage-related protein, tail component  [Mobilome: prophages, transposons]. 	MSDRLTRRAAVMAKVEAVYGTAETTFAATRGDAIALSHDVLSRVQLAARVKSVQGAAVEIDDVFAMTAGETYACRFRVFETEEDTVGISVVRPVMTLPGETQILTLTGSGPMPVVGDLVHVGPARVESYAQIVTRIEATQDMCAIVRTVDAAPQIDTILAATPIPAWSSRVGAEIDDNLLQPSAPRFVALTSGLAATGLANRISYAVAPGTGSVPTIEIGLDHRISGAESWSSTTIPVANGGGTIDSYTPGQSVDLRARGIGATGVAGPWSATITIVVGSADAALPAALDAASISITTLLGGALIQFATGDDAATARVQIYRSITSLLDRETDAVGAPIAVEPGQSYATTLGDTTRTDLIVGGGLEAAGSWTLGTGWTISGGVAAHAAGAAGRISQAVALTGGKYYRIGYDVVSISGSTVQAGLIGATLRPGTSVATTGPKLDRIQAVSGGTGIAISAEAGAAATIDNVRAYLETDACLEQGAHHIWIEPQNAAGVPGPVAGPFTIIIT*	mmseqs_cdd	common_virus	C0	7249	0	7249	GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote_CDS_0002	shell	direct	high	1529	0.999	GCA_001402725.1_02170
GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote	cenote	CDS	2068	2271	GCA_001402725.1	LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725.1_LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725_1_18	GCA_001402725_1_18@C0	2069	2272	GCA_001402725_1_18_3	GCA_001402725_1_18_3	-	25957	.	.	hypothetical protein	MSKSKTTPAPSVQPYPDRGGSFVLDEGSMTLTPVPKPGETADDTPVQGPVETDVETGPEPTPEQEPQ*	.	hypothetical_protein	C0	7249	0	7249	GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote_CDS_0003	cloud	direct	high	203	0.995	GCA_001402725.1_02171
GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote	cenote	CDS	2268	2708	GCA_001402725.1	LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725.1_LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725_1_18	GCA_001402725_1_18@C0	2269	2709	GCA_001402725_1_18_4	GCA_001402725_1_18_4	-	25957	.	PDB:2GJV_C	tail-completion-protein	MADVDDITARLKERVPGLGGRAWGAAEFGALTATGQLPQATPAAHVIPTGIKGGSQTPRTAAYVQSIERLYSVVLTVKAGDASGARALPVIGELIAAIIAALAGWDWGGRVGVMTFRGCTLSRAVAGAFVYDISFSIPDQLRFAPT*	hallmark_hmm	common_virus	C0	7249	0	7249	GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote_CDS_0004	cloud	direct	high	440	0.998	GCA_001402725.1_02172
GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote	cenote	CDS	2712	3461	GCA_001402725.1	LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725.1_LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725_1_18	GCA_001402725_1_18@C0	2713	3462	GCA_001402725_1_18_5	GCA_001402725_1_18_5	+	25957	.	COG3598	RecA-family ATPase  [Replication, recombination and repair]. 	MIAAARDTFVATPKLKLLLDADGVTLIAEAIRAAFPDAPPDVIVIDPIRNLFDGGPEGGGENDNTAMMFFLKDRVEVLREAVNPDAGVILAHHTRKAAKHQVKDDPFLALSGASALRGFYTSGLLMHRPDEDSTQRRLEIELRNGPALPGKLIDKVARRWVELNQMNERLVRKEPYGRRRRPKLCAFRPRMCCTSTGRLMPGRSGACRMRHPLWCDCFFWINTTTRNSTGKRRLRCSLASSPRTLRKNR*	mmseqs_cdd	nonviral_gene	C0	7249	0	7249	GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote_CDS_0005	cloud	direct	moderate	382	0.509	GCA_001402725.1_02172
GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote	cenote	CDS	3570	3824	GCA_001402725.1	LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725.1_LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725_1_18	GCA_001402725_1_18@C0	3571	3825	GCA_001402725_1_18_6	GCA_001402725_1_18_6	+	25957	.	.	hypothetical protein	MLVAATEVLTHARAVVDLCRLAGQPQMAGRFLERDTGIDDVRAALLATRAEAVPDISAAHPQPGRPSGARPWGDVIARTFRLKG*	.	hypothetical_protein	C0	7249	0	7249	GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote_CDS_0006	.	unmatched_CDS	none	0	0	.
GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote	cenote	CDS	3829	4194	GCA_001402725.1	LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725.1_LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725_1_18	GCA_001402725_1_18@C0	3830	4195	GCA_001402725_1_18_7	GCA_001402725_1_18_7	+	25957	.	PDB:1TCZ_D	Head-decoration-protein	MTTLTETRHAGGFLVWEALRDFCRSTVILASGDLQPGTILGKITASGKYAAHDPAASNGTQTAAAILWDSVDASSGDTNAVVLIRGPAIVNQYEISILGTPTAPQIAAAYAALLTLGILVR*	hallmark_hmm	common_virus	C0	7249	0	7249	GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote_CDS_0007	shell	direct	high	365	0.997	GCA_001402725.1_02173
GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote	cenote	CDS	4217	5530	GCA_001402725.1	LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725.1_LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725_1_18	GCA_001402725_1_18@C0	4218	5531	GCA_001402725_1_18_8	GCA_001402725_1_18_8	+	25957	.	PDB:6XGP_A	Major-Capsid-Protein	MATMDIFEGDAFSIIELTRALENIPYQPATLSASGLFGPRGVRSRTVVIESRDGTLSLIPFSERGSAYDQQTPERRDVRAFVCRQFKKQDVIWASEIQQVRDFGSESATQQVQAEVARKLGRLRNDAETTFEYHLFNGIQGLVKDPRDGATVVNDFTEFGITPATEVDFDLDNATPASGALRKRCQALIESVEDTMGGLATGAIALRAECGSAFFADLVAHKEVRETYLNTAAAADLRSRIADEVSFGGITFRRYRGGAGFGVATDKAVFYPEAVEGLFEIYHAPADTFETLNTLGQPLYARIIPDRDRDEWVRLEIESNPLPICTRPQVLRSAADVTGVSYVARGRSQFMPARRGSVPKLSRPNSRPSLGCSRMACAPLWPMRMRQVWRSTGCGAANAGQVSTARFAPPSGSRTDAYRMTSAPISRAASESCWQGP*	hallmark_hmm	common_virus	C0	7249	0	7249	GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote_CDS_0008	shell	direct	high	1313	0.999	GCA_001402725.1_02174
GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote	cenote	CDS	5975	6355	GCA_001402725.1	LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725.1_LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725_1_18	GCA_001402725_1_18@C0	5976	6356	GCA_001402725_1_18_9	GCA_001402725_1_18_9	-	25957	.	PFAM:PF10078.8	transcriptional-repressor	MAHPRNLAPAPDRNAVLTKAMLRAAERLGLSGRQLAEIVGVSEATVSRLKRGEATLEAGSKPFELAALLVRAFRSLDAITGGDEAVARVWMTAANAALAASPLERMATVQGLVDVTTYLDARRAPV*	phrogs_hmm	hypothetical_protein	C0	7249	0	7249	GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote_CDS_0009	shell	direct	high	380	0.997	GCA_001402725.1_02175
GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote	cenote	CDS	6414	6662	GCA_001402725.1	LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725.1_LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725_1_18	GCA_001402725_1_18@C0	6415	6663	GCA_001402725_1_18_10	GCA_001402725_1_18_10	+	25957	.	.	hypothetical protein	MSLAFETALELLFADPNLGRDVVYIADGGAPVSVLSRDLRAGCAVIFGGSGADGDRSKGAGRRAALAPGPTSPHSALARGDG*	.	hypothetical_protein	C0	7249	0	7249	GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote_CDS_0010	shell	ambiguous	low	3	0.012	GCA_001402725.1_02176
GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote	cenote	CDS	6659	7054	GCA_001402725.1	LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725.1_LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725_1_18	GCA_001402725_1_18@C0	6660	7055	GCA_001402725_1_18_11	GCA_001402725_1_18_11	+	25957	.	.	hypothetical protein	MTGIFAGMAAMAALAIWLRGRGADARLTPAVGCLALFALGLTVLLVLDGGPREDWQVLVLPPLPILLAHHVRSLAGPARWPRIEAALADLAAARPGLAAALAPLPPEVRRAYAATLAAPWGGTPSARIRWP*	.	hypothetical_protein	C0	7249	0	7249	GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote_CDS_0011	shell	direct	high	395	0.997	GCA_001402725.1_02176
GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote	cenote	CDS	7015	7248	GCA_001402725.1	LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725.1_LLVV01000018.1	GCA_001402725.1|LLVV01000018.1	GCA_001402725_1_18	GCA_001402725_1_18@C0	7016	7249	GCA_001402725_1_18_12	GCA_001402725_1_18_12	+	25957	.	.	hypothetical protein	MGGDAVRQDPLALIGKFDGPGLALYGGSDSRIDAAENAAALRRLAPKPGLEIEILPGLTPLFQPDPTGDPQITPATG*	.	hypothetical_protein	C0	7249	0	7249	GCA_001402725.1|LLVV01000018.1@region_1_7249@tool_cenote_CDS_0012	shell	direct	moderate	197	0.842	GCA_001402725.1_02177
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	31491	31739	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	1	249	GCA_001402725_1_2_34	GCA_001402725_1_2_34	+	157765	.	COG3750	Uncharacterized conserved protein, UPF0335 family [Function unknown]. 	MSNDAYTVAADELRQFIEQYEHLEAEKKDITEQQKDIMSEAKARGYDTKVIKKIIAMRKRDKNDLAEEEAILDIYKAALGMS*	mmseqs_cdd	nonviral_gene	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0001	persistent	direct	high	248	0.996	GCA_001402725.1_00444
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	31755	32642	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	265	1152	GCA_001402725_1_2_35	GCA_001402725_1_2_35	-	157765	.	.	hypothetical protein	MDLVFHLGAHATDDERLVRTLATNPEAMTAAQSHAPAPAAYRMALRDALIGLKGQPADAATQDRLRTACLRGARGPVERLVFSYENFLALPERAIGASGLYPAAADKLVPLANLFPQDRTEFHLGLLDPALLLVALAARQPGRDFSELLCGHAPEDLRWGPVVARMAEAAGRVGAKLVLWCNEDLPLLFPEVLRRMGGLPEAGALMGEYGLAEALMQPEGARRLRAYLASHPPQTAEQRRKVLIAFLEKFARPEALVADVPLPGFTADLVAEIAARYAADLADMARLPGVTLITP*	.	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0002	persistent	direct	high	887	0.999	GCA_001402725.1_00445
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	32936	34600	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	1446	3110	GCA_001402725_1_2_36	GCA_001402725_1_2_36	+	157765	.	COG1252	NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]. 	MVTRIVVLGGGFGGMYTARALARRLGRKAEIELINAENYFVFQPLLPEVGAGSIMPAHAVSPLRFLLKGVQVRKAVVDSVDFERKVVTVFQGIQRRPTEVPYDHLVIALGQGTDFSRMPGLEEHALKMKTLEDARRLREHVIEQLEHAQVTALPDTKRGALTFTVVGGGFSGVETVGEMKELLDRSLPFYSNIDPSEVRVLLVEYAPRILNEMPKELADYATKHLLGHGIELKLGTGVRSATHRQLVTSAGEVIDTRTIVATIGNAPLPVILRMGLPLEKGRVAVDRCLRVKGRTDVWALGDCALIPLKDDATERNDFAPPTAQFAVREAKRVAANITAVLKGRAPGVFAYSSRGALASLGAKRGVADIFGRNITGFPAWFIWRSYYLALLPGIGTRIRVMINWSLDLLGARSLVQLRTYQKPPMRHVYFRAGDRIYQAGDRSDGFYTVISGAVQMVRTDPESGEMTTRVIGPGGHFGERLILGATRRKTSVNAIEDTKVLVMNRAEFLMLVESFEAFRDYFRPYMDKHGVSLPGTAGPEPKAEPKEEPQRPGA*	mmseqs_cdd	nonviral_gene	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0003	persistent	direct	high	1664	0.999	GCA_001402725.1_00447
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	35076	36284	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	3586	4794	GCA_001402725_1_2_37	GCA_001402725_1_2_37	+	157765	.	CDD:cd00801	P4-integrase	MGARDKLTAVKIRAAAPGRYGDGAGLYLDRTEDGGKWLYRYTIAGRRRDMGLGSLDAVTLAQARRERDRWAAVLASGRDPISERAREREAAATREDPSLSDLVDTVFGAIKHTLKGEGEAGRWMSPLRVHVLPKIGTRPASSLRTADFVRVLQPIWRTKPTVAEKAYSRLNLCFKKGKRIGYAVDSDTLAAARELLGDLHIEPEHIAATRWQDAPALFTRLAGDTSGLMCLRLLLLTAVRGDAARGARFNEIDGSLWIVPKERVKGRLKAATDFRVPLSSQALAIVAEARRLSNDPETGLLFPGDRGEPISQNALLKAINKIGEAGRPHGFRTTFRTWVQDTLDGSHDLAAEAALGHVIGNKVRRAYARSDYLDQRAALMQRWADYVTGESAQVVQLRPSAG*	common_virus_hmm	common_virus	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0004	persistent	direct	high	1208	0.999	GCA_001402725.1_00448
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	37046	37330	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	5556	5840	GCA_001402725_1_2_38	GCA_001402725_1_2_38	+	157765	.	.	hypothetical protein	MAIMLLYLLPLFTADFGKLNWIMWVPTIAIFAFIAVTSHSYFFNPLLGAFGWHFYRVGTPQNVTSILITKRTIRKGDQTINGIELGDYVILETE*	.	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0005	shell	direct	high	285	1.0	GCA_001402725.1_00449
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	37334	38203	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	5844	6713	GCA_001402725_1_2_39	GCA_001402725_1_2_39	+	157765	.	PF16162.5	Domain of unknown function (DUF4868)	MPRTLFALCNHDGQTVVRRVPLEDGVQGDVERIFDEQEQSFFLGKDEPIEFNGDWKPDENQLLCITDRDLLAQMNETLAIGAGAYDRLDISSYDTAGVKALFMHSEQIKGHILLQKFRTSQYLQRKGLTLAFNGNQFGKLSERGFSLDERLGAVVDGDTVMFVSFHVLRSILTVQEHFAEATAQEVDEFAQHASFHIENRAVFDSHMDERCRKLIRGISKSRVLVDHNAAEIIARAKTVGLTLVEDGGRIVLPSVKRDLKTVLSFLEESVYKGVFSEETFLTNSKRPLA*	hhsuite_tools	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0006	shell	direct	high	869	0.999	GCA_001402725.1_00450
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	38925	39437	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	7435	7947	GCA_001402725_1_2_40	GCA_001402725_1_2_40	-	157765	.	COG0546	Phosphoglycolate phosphatase, HAD superfamily [Energy production and conversion]. 	MIIFDFDQTLVDTSSVEQLRAARNWKAVMAKAPQLPVYEGMTELLSELHASGHTLAIVTKSPDMVPKAFIRAHKWPIDIVVGYHQVKNKKPDPEGLLLAMSKAGASPENTYHVGDQPQDTEASRGAGVMALGSAWGCGDIQGLEASNPDEIFSTVADLAVFLKSGVVRVS*	mmseqs_cdd	nonviral_gene	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0007	.	unmatched_CDS	none	0	0	.
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	39439	40401	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	7949	8911	GCA_001402725_1_2_41	GCA_001402725_1_2_41	-	157765	.	COG0758	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake [Replication, recombination and repair]. 	MNEAAITPSTIGLAALLNLKGIGRRAALRIIRSPLEAGSARDQIAELARVGNISNIDFADAWSKAEDNLQRSIDSGIKAFSFYDESYPERLRHMPDPPAILYVKGDSSGLHAAHSVAVIGTRDPTAYGEKVARRSAATATEQRFVVVSGLAHGCDTLGHEGCLDQNGVGVAVMAHGLEKVYPAANRGLASRLLEAGGCLVSEYPIGMTPMRSAFAERDRIQSGLSDAVLVIETDVKGGTMHTIRFSREQKRALACIDHPQSWRHEPKTQGNQMLIAENWAVPIADGHALLAFLNSVKAIDKSAPTEFPVGTGKSQISMDF*	mmseqs_cdd	nonviral_gene	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0008	shell	direct	high	962	0.999	GCA_001402725.1_00451
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	40405	41091	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	8915	9601	GCA_001402725_1_2_42	GCA_001402725_1_2_42	-	157765	.	PF00156.27	Phosphoribosyl transferase domain	MIYYKSVSGWMEFPRLSMSNGLTATYTIAYRLKDKTGEHWTSRFNRFKNKENKAEWGAATVMYEAVPALMKHLGLNMHQTMFLPVLSSGETQANPNRSICWMTKECAGVCGANYSSTSLAKNIHQKIHNIYDASARSAELDKANYQAAKMQTNTFVIFDDIVTRGDTLSRVALAIHAANPGSTVYGIALAKSERVAYCPNPDNDHVPASWDNLWQQGENEHAQKNSKV*	hhsuite_tools	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0009	shell	direct	high	686	0.999	GCA_001402725.1_00452
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	41538	42734	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	10048	11244	GCA_001402725_1_2_43	GCA_001402725_1_2_43	-	157765	.	COG2856	Zn-dependent peptidase ImmA, M78 family [Posttranslational modification, protein turnover, chaperones]. 	MKTGTPGFQAKRLVEARDSRGLTQIALAEMVGRKSSAISRWESGDHSPEPDALDALATALRLPVSYFLRSDLEHGSRPMFFRSLLSSTTQGERKRARVRLRWAQDISAVLQDWVDLPEVDVPSIEAKDHRDIRDEDIEAAALECRARWGLGLGPINDLLLAIENAGVVVVREEVGTSKMDGVSNWSDLDNRPYMLIASDKATAVRSRMDAAHELAHLVLHRFIPSKSLNGSADFKEIERQAFYFAGAFLMPAETFSSEIWSPSLNTFLALKERWKVSVGAMIMRCVNLGIVEGEYERRLWKHYSARGWRKSEPLDDTLIPEDPRLLSRSIKLLLDEGVRTRADLIADFRLSESDVESLCGLPPGSLSASKAEILPFPSLRAKSEVAGDRNNVVPLRRD*	mmseqs_cdd	nonviral_gene	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0010	shell	direct	high	1196	0.999	GCA_001402725.1_00453
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	42764	42994	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	11274	11504	GCA_001402725_1_2_44	GCA_001402725_1_2_44	-	157765	.	.	hypothetical protein	MCAMLVVTASKNGDPMLPAFAGVGIPSHDLSSWIKLSSIEDIIALYNAPAEQKDVPVDIADRAVPKLKRKGPSEQG*	.	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0011	shell	direct	high	230	0.996	GCA_001402725.1_00454
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	43760	44599	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	12270	13109	GCA_001402725_1_2_45	GCA_001402725_1_2_45	-	157765	.	pfam09015	NgoMIV restriction enzyme. Members of this family are prokaryotic DNA restriction enzymes, exhibiting an alpha/beta structure, with a central region comprising a mixed six-stranded beta-sheet with alpha-helices on each side. A long 'arm' protrudes out of the core of the domain between strands beta2 and beta3 and is mainly involved in the tetramerisation interface of the protein. These restriction enzymes recognize the double-stranded sequence GCCGGC and cleave after G-1.	MRPWLLEARRKFHAECLAGPITETKGVPSIADVSNRPSRDIATALVAKIGASKSHAAKPAGQTAGAMFETATQNFVASCFAQLLHLRPGSFAVERGQAISQFDQYSHLDALRSLAIENKELRTLLGTDYLIKPDVVVLRRPEPDANINRQQLLVDDTVARHTALREANGVQASLHASISCKLTIRSDRVQNTRSEALNLVRNRKGRLPHIVAVTAEPTPSRIAAIALGTGDMDCVYHFALPELVETLREQDRETLELVETMIDGQRLRDIADLPLDLII*	mmseqs_cdd	nonviral_gene	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0012	shell	direct	high	839	0.999	GCA_001402725.1_00455
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	44599	45471	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	13109	13981	GCA_001402725_1_2_46	GCA_001402725_1_2_46	-	157765	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MDDWCRKTLNLNRKCWNVLEGPQSDLTQFDARPYAGVDLVAGGVPCPPFSKAGKQLGAADERDLFPSAIRVVDEVRPKAVMLENVRGFLDAVFHDYRQELKAQLRALGYTFAEWHLFNASDFGVSQLRPRVVIVAVHDRYADKFEWPKGSDMRPPTVGERLRDLMGANGWEGADAWAAQADEIAPTIVGGSKKHGGPDLGPTRAKRAWATLGVNGHTIAEDAPEPGFAGVPRLTVRMVARLQGFPDDWQFVGRKTAAYRQVGNAFPPPVARAVAQNLRKAITARRFHAVA*	common_virus_hmm	common_virus	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0013	shell	direct	high	872	0.999	GCA_001402725.1_00456
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	45863	46672	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	14373	15182	GCA_001402725_1_2_47	GCA_001402725_1_2_47	-	157765	.	PDB:2G1P_B	Adenine-specific-DNA-methyltransferase	MTESMIPVAPVAPAAPWLGGKRNLAKRICTILDETPCRTYCEPFVGMGGIFLRRRARPRAEVINDAGRDIANLFRILQRHYPQFLEILRFQLTVRSEFERLLATRPDTLTDLERAARFLYLQRTAFGGKISGRNFGVSRDRPGRFNLLTLEPMLEDLHARLSGVVIECLDFGAFIQRYDAPETLFYLDPPYWGCEGDYGKDLFSRDDFQRLADGLRGLKGRFLLSINDVPEIREIFSWAEIEPVRTTYSIAGKGQSIPAAELLIRGKVR*	common_virus_hmm	common_virus	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0014	persistent	direct	high	809	0.999	GCA_001402725.1_00457
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	46842	47189	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	15352	15699	GCA_001402725_1_2_48	GCA_001402725_1_2_48	-	157765	.	PFAM:PF10828.7	Rz-like-spanin	MTDTLLATILAQIVLPILATITTALIGWAAAKLRARWGIEIEAAQREALHQALMTGAQLALTRRGRRDDGRDLDLLARDAVAHAQASVPDAIRALAPRDGVLRSLAVAKIATLSR*	phrogs_hmm	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0015	persistent	direct	high	347	0.997	GCA_001402725.1_00458
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	47208	47897	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	15718	16407	GCA_001402725_1_2_49	GCA_001402725_1_2_49	-	157765	.	PDB:1WTH_A	Tail-associated-lysozyme	MTTDWRAAQLRLRALGFDPGPIDGLCGPKTKAAITAFGRSRGLSAEPGFGPVIAALMRADAPCPDLPCPDLPWMTEALRLQGLHERRDTARLRAWLDPAAGAIDPRAVPWCGAFVASCLRAALPGVILPDTPLAARAWSRFGDPVAPVFGAVLVFWRGAPSGWQGHVGFYRGEDASAYHVLGGNQSDAVTVTRIAKTRLLAARWPAGVPVTGRPVRRTTKGLALSSNEA*	common_virus_hmm	common_virus	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0016	persistent	direct	high	689	0.999	GCA_001402725.1_00459
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	47899	48219	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	16409	16729	GCA_001402725_1_2_50	GCA_001402725_1_2_50	-	157765	.	PFAM:PF05106.11	holin/anti-holin	MSDARGLVELVDAIWGGAVTTMAAALAGRLMWHSTEVRARKRRFLSRELLWELPVAVGMAIIGEAVAAYFELGRTVTTGVVASLAYLGPRGAQVALTRVFFHNKES*	phrogs_hmm	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0017	persistent	direct	high	320	0.997	GCA_001402725.1_00460
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	48281	48775	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	16791	17285	GCA_001402725_1_2_51	GCA_001402725_1_2_51	-	157765	.	PFAM:PF14301.5	tail-fiber-protein	MEHGFFHPAHGYWQTIGTPEAALRTAYPEGTAEVPLRPGADHLWTGEGWEPAPARLSVDQALANLKAARDAAIARGIEHDGLRLQTDDLSQSRLTAAALAAQLDPALTLRWKLATGEFVALSAPQIIALALAVRAHVQACFDREADLAAQIRAAADPAAVALTF*	phrogs_hmm	common_virus	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0018	cloud	direct	high	494	0.998	GCA_001402725.1_00461
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	48775	49719	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	17285	18229	GCA_001402725_1_2_52	GCA_001402725_1_2_52	-	157765	.	.	hypothetical protein	MAKPAKPTVPPPPLRSNPETFSARMEASLLFWKTFAEYLDALGDHAETQADAALAAALAAGAGTGLALRGNGGKLMAVNAGATALEFLTASGAGKAILANASAAGLALASDADAAAQRATLGLGTVTPLAEAVTDLNAITRSGWNRFTASLTDNTPFATGAGMVLTIFYDGSAAVQLVWGHNKGESDTGQWIRWRAASTWRAWVRLHGSQSEINGLIGALALGVAQSWQDVTAARLAGTNYQNTTGRPIAVSITTSGTTANTALYLGVAAPANILIAATGTGSTLRIMSHQAVVPAGHYYRFEGAAPATWAELR*	.	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0019	cloud	direct	high	944	0.999	GCA_001402725.1_00462
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	49719	50657	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	18229	19167	GCA_001402725_1_2_53	GCA_001402725_1_2_53	-	157765	.	.	hypothetical protein	MKILTPIAVTDATLISCSIPETDFPRWNAQTTYPRGAFVISPATHTVYRALQGDNTGHDPDLEQAALADPLIDDPDPVFWQVIGATNRWRLFDGKPSVLARAAEIIRVTLAPGVAVGGVAGFGISAAEIRVTMTDAGAVVYRRAIAMQDETVVSDGLGYYVEPITELSEFVLTDLPPYAAAQITIEAIRRGGQVSVGQIVLGPVWALGRPVIGGTGFQGVDFSYVKQDDYGDLTTVRRAATRLSTFETCLPNARLLGFDTRMRSLRGGTAAVWIGSDDPRKAAINYGFYRSYRAAYQTDAWSLISIEVQGIV*	.	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0020	persistent	direct	high	938	0.999	GCA_001402725.1_00463
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	50654	53560	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	19164	22070	GCA_001402725_1_2_54	GCA_001402725_1_2_54	-	157765	.	Uniprot:A0A0P9JG44_PSESX	tail-tape-measure-protein-	MSASAVIGALRVNLGLDSASFQKGVARSTASLGTLKGAAMAASAAVSAIGAAIGGPALAAIVTAAARSAREITRLSQVAGASAQELQHWSFGARTVGIEQEKLADILKDVNDKVGDYLSTGGGAMADFFEKIAPRVGVTAQAFRDLSGPQALQLYVSSLEKAGLSQAEMTFYMEAIASDSTLLLPLLRANGAEMARLGETASSFGAVLGTDAITALRAAERALDDISVVIEATRNRIAADLAPAVEAMARAFVNAMREGGFLRGVIDGLMAALPHLTAYAAAFTAGLIAWQAAALAARLATMALSVSMAGLRAAIAATGVGVLVVAMGELGLAILDAVRKAGGFAAAWYKLKAKFFEVLRDMAGGWVEFTWALADGMNDLFGTRLMGADAGITQTLRDLQIGAEDAAAAAQEVSAAATEAEGTLTGLGGAGSGAGKKVKKGLTEAQKAAQEFADALRDGVRSSVEGAVDWMLDGFQGGFKGLVSLARDALKQVVALFLKNRITLSLGLGVSGGAATGAAAGAAGAAVSGAAAGGFAGPLGLLGTAGSFLGAIGSGAAGLGTALFGAGGXXXXGGGLGAAGTYLSSVVGSATSSLGAFGAAIGAALPILAGVGVVFSFFKKKVTQLDAGLRLTVTDMDTLVETFSKTKTSRFWGLSKKTRETFTEAGAAIADPIEAAVAGIVGGVADMADTLGIAGRDALKGFATQIKISTHGLSDSDAQEAIRAGFTQLSDELARIILAAGEGVSGNLSAFTSAFARRGESASETLTRLSSALATANAWLDRLGKTAYDTSLAGADAASKWAGAFGGLEAMSEAVSSYYAGFYSPAERLAQAREELSQALAGLGIDALPGSRQAFRQLIDAAFASGDSDLAAKLIQLAPAMAEITDQAQALTAALKDLDTQSLYRSGAEALYAATSEGHRRRLTGTDATVQGLLAEVVRAIREGDINNARLTARLLAVQERMSLDPAR*	hallmark_hmm	common_virus	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0021	persistent	direct	high	2906	1.0	GCA_001402725.1_00464
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	53611	53844	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	22121	22354	GCA_001402725_1_2_55	GCA_001402725_1_2_55	-	157765	.	.	hypothetical protein	MILRGAAAQRRAEVETARALNHQLAGLVAFAFHDPQHLPEFRPDDTAATAAPAQGAREVDHERVRGALIAMALRPRP*	.	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0022	persistent	direct	high	233	0.996	GCA_001402725.1_00465
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	53922	54287	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	22432	22797	GCA_001402725_1_2_56	GCA_001402725_1_2_56	-	157765	.	PFAM:PF12363.7	tail-protein	MTGMTSLRGAVPFAGERYFRLSTNALVRYQDAAGETLLEAMAALEQSPGDTRRIRRMVWAALSHEGLTEEAAGDLMDEIGQTEAARLLGEAIRAAFPQAGAQTGDAGETGGNGASRKKRTP*	phrogs_hmm	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0023	persistent	direct	high	365	0.997	GCA_001402725.1_00466
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	54284	54724	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	22794	23234	GCA_001402725_1_2_57	GCA_001402725_1_2_57	-	157765	.	PFAM:PF16463.4	tail-tube-protein	MANSQIIAYGATVERSTDGVAWTAIPGCKGIAIPAPSTDYIDATSLDSPNGFKEYIRGMRDAGEISVPCGYTAAGYEQQIADSLRDEPVYYRTTLKPAPGQKTGDVFQFRGFPTPQVEGNDVTGLIAMTISIRATGNVTWTKGTKA*	hallmark_hmm	common_virus	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0024	persistent	direct	high	440	0.998	GCA_001402725.1_00467
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	54735	55103	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	23245	23613	GCA_001402725_1_2_58	GCA_001402725_1_2_58	-	157765	.	PDB:2LFP_A	tail-completion-protein	MEESFRAALLASGAVTALAGDRIDFGANPQDTACPRLVLWTIAETGGLLLSGPDGISRGRVQVDCYAESYGAAKRLSRAVRAVLDGYSGGGFQGVFHAGTRDSHDSEAPFRVSLDFITVFTS*	hallmark_hmm	common_virus	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0025	persistent	direct	high	368	0.997	GCA_001402725.1_00468
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	55103	55606	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	23613	24116	GCA_001402725_1_2_59	GCA_001402725_1_2_59	-	157765	.	PFAM:PF04883.11	type-I-neck-protein	MTGTVKLEGLRDLEQALAQIERTATAKAVMRRALKTAARPVVDLAAALAPEGPTGNLKRSISISTKLSKRQQQANRKLQAEGKAAVEMFLGPDYKQAGNHAHLVEFGTKPHRNRGQFAGTQHPGTAPRPFLRPAWEAEGRPTLDRLGKTLWVEIEKAARRAAAKEKG*	hallmark_hmm	common_virus	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0026	persistent	direct	high	503	0.998	GCA_001402725.1_00469
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	55603	55938	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	24113	24448	GCA_001402725_1_2_60	GCA_001402725_1_2_60	-	157765	.	CDD:pfam05521	Head-Tail-Connector-protein	MGECLDTRATILRPRLGDDGLSRSLTGWDEHATLWASLRETAGEEAAAAGQIGTRRDARLRLRASRLARQITAADRVRARGQLWEIRGICAPGAGLIELSLAAIMIGKAAG*	hallmark_hmm	common_virus	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0027	persistent	direct	high	335	0.997	GCA_001402725.1_00470
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	55941	56534	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	24451	25044	GCA_001402725_1_2_61	GCA_001402725_1_2_61	-	157765	.	CDD:cd08054	Head-Tail-Connector-Protein	MRVLGPVPGVVSVAEFKRATHMDEGTEDDATLAACLAAAQSLVEQATNRPLGPREVEITLEAVPGLRRWWFPCAPVVAVAQVVVETETGAQALDPARWRLRLAHDEPRLDFAAGALPSGAAPCPVTITATVGADPESPALLPLRQAIVLIARDWHAAGITIAGEAASPGALSFGARAMLRQARYLRPRVMAGGLSGG*	hallmark_hmm	common_virus	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0028	persistent	direct	high	593	0.998	GCA_001402725.1_00471
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	56534	57040	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	25044	25550	GCA_001402725_1_2_62	GCA_001402725_1_2_62	-	157765	.	.	hypothetical protein	MARLVTVRFLRGSAPYNTGEIAGFEAPVARALIASGAAEAVKAAPSLPATAAGPEACKRVVLTFLAAAPPYHAGDVAGFDPLEAAALVARGKAVPLTTRTAAGEDPAEEEEPAADHAADPAAEGPDDETDDDAPEPEFVLVDPDDDGAGEDLDDDGEDGAPPVQGRAG*	.	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0029	persistent	direct	high	506	0.998	GCA_001402725.1_00472
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	57095	58420	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	25605	26930	GCA_001402725_1_2_63	GCA_001402725_1_2_63	-	157765	.	PDB:6B23_B	Major-Capsid-Protein	MTIDDLRRARKAAADGMSERAEALAALEAAETPDAAAISAAETAFAAAQGAFEAADKQVKRAEAVEAAKAAAAGPGDTDPGATPGAAPAPGVAAVPKDPAHKGIEVGLIVGALAAQKGDLGRAVAQLERAGFGQVAAALNATDATAGGVTVPRPLAADLIEMLRPRVVMRRAGARVVPMPAGQLRKARQAGSASAGYGGETVAPRASAPGFEAVDQSFKKLRALVPISNSLLSYSSLQMGALVRDDLLKVMGAREDLAFLRGDGTNEAPKGARNWIPAGHWLGAVAGTDALAIDKALRKLVSLVEDANILMVTPGWIMRPGAKNFLAALKDLHGNALYPSIDARGELMGFPIHTTTQLPNNLGAGANETEVMFADFSYLVIGESGLLRIAQSTEAAYLDANGEMQSAFANDQTLMRAIAEHDFAPEHEVAIAGLQGIGWAL*	hallmark_hmm	common_virus	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0030	persistent	direct	high	1325	0.999	GCA_001402725.1_00473
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	58556	59464	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	27066	27974	GCA_001402725_1_2_64	GCA_001402725_1_2_64	-	157765	.	cd07022	Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.	MGRTVREVLAAGGGLMALDTARAADLLATAWPAAAAAEPQALAGDPARYTRERGLAVMPVRGLLTPNSALLERYLGWATYRGIAEACAELAADAAVSAVVVEFDTPGGYTLGIEDAVTALRDLAAVKPVHALAAPLAASAGYWLASQARELVMTPGAAVGSIGVAVTAAANVAPGAASGVQLFDFTSRHARAKWPDPATEDGKAEIRRGLDRTEARFHAAVAEGRGIAPEDLAARLSVSDDPEDGGAVFDPAEALARGLADRIETRAAFYARLRAAHARAPRKGLARGARALAAAARAKARL*	mmseqs_cdd	common_virus	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0031	persistent	direct	high	908	0.999	GCA_001402725.1_00474
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	59468	60772	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	27978	29282	GCA_001402725_1_2_65	GCA_001402725_1_2_65	-	157765	.	CDD:pfam04860	Portal-protein	MNLRGLLGLGARAMPPAMPPAAARIEPALTGPALGRATAGAAALPVSHDAGWREFGIAGASRVRSLPRVTPDLAQKHATVVAACTVIAGDLAKLPLGVFQRAGSGREIRLRDHPLDHLLNAEAAPGVPAHVMRFAIGYAFTLRGRGFAFAPRDGAGEVTLIEAIRPDHCTVLRAGRERYYEFEDGAQVHRRVSGRVMAHLRYMAEDGWTGRSPIEVAAETLGIALARQEAAARLAGGKGFKAVAKLEDFGADDETWQRARARLKAAMAEDADEGVLIIGQSDDIKSLGLSAADLELLASQKFDREQIAALYRVPPAKLQMLEYGVKANGEQQALDYKAECLTHWGRFLESGLGQGLLSAAERRAGLFLRHQYDALLMATTKERYEAITKAVGGPILTPNEGRAIEGKDPIAGGDALYPPPNMTRKDEAATGKED*	hallmark_hmm	common_virus	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0032	persistent	direct	high	1304	0.999	GCA_001402725.1_00475
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	60769	62442	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	29279	30952	GCA_001402725_1_2_66	GCA_001402725_1_2_66	-	157765	.	CDD:pfam03354	Terminase-large-subunit	MRPALDHPVSRYATDVMEGRIVAGELVRLACARHLRDLDTGAERGLYFDCAAADRIINFARMLQHTVGPMAGRPLELQPWQVFRHGSVFGWKREGSGLRRFRSTYHQVGKKNGKTTDTAVPMLFTQLLDGEAAPQGFCAATTRDQAGLLFKEVGRIVKRSPVLCRMMQTMRHEIVTPRVDGVIKCLSRDGDSSDGINPSFLARDEMHRWTDRELAETIVESMIARAQPIDWVITTAGHDRQSLCGELRGYAEGVLRGAITDDAFFGFVAEPPADCDPLDPAFWPMGNPNLGVSKPIGKMHEAASKAAAIAASMPNFKRFHCNLWTEGEQMWIARESWDQGAADAPFDPRRLYGRDAWVGVDLSNKIDTTAIVVAVPLDGLIYLIAYTFLPAGPKGFIVRAQKEKREYVAWRDQGWLEVHTGGAIDEAQIEARIGWIAKTFAVQEIAYDPWGMKYMADRLAKRRLPMVEHRQGFASMSNPMKRVEELVAQNRLRHGGNPVLAWQVGNVHRDEDAAENIKPNKKRSTGRIDAAVAMIMAVGRAAAGERRRKQARGVETL*	hallmark_hmm	common_virus	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0033	persistent	direct	high	1673	0.999	GCA_001402725.1_00476
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	62426	62866	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	30936	31376	GCA_001402725_1_2_67	GCA_001402725_1_2_67	-	157765	.	CDD:pfam05119	Small-Terminase	MRGAKGTLRIVTPMKGEDETIPAPPEFMSADARAVWLRLAPQLVRLKRLEPHYHELFAGYCEEVAVYIAMTRDIGANGVTYETGAGRNGNQKRTRPEVHLRKSALEGMIRLGALFGLSPIDEKRLGAASQGDLFEDLMRAVNAPCA*	hallmark_hmm	common_virus	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0034	persistent	direct	high	440	0.998	GCA_001402725.1_00477
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	62991	63395	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	31501	31905	GCA_001402725_1_2_68	GCA_001402725_1_2_68	-	157765	.	PDB:5H0M_A	HNH-endonuclease	MRAFLFSGDDMAIRKLCSAPGCEALALPGGSRCPEHLARDRERKAKAARSAEATRWHALYHDPRWRRAAAAFLAAHPLCADCAELGVIEAAREVDHITRHRGDARAFWDRTNWQPLCKRCHSRKTAREIWHGAD*	common_virus_hmm	common_virus	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0035	persistent	direct	high	404	0.998	GCA_001402725.1_00478
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	63488	64399	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	31998	32909	GCA_001402725_1_2_69	GCA_001402725_1_2_69	-	157765	.	.	hypothetical protein	MSLMTFPGGRVVPATVLADLAVRHLTGTADPAAIRALAARDRAQFRFWVEVLDWALTTKAVARSELWARRGGAGGPLEVVLSVTRMQALAQACVMARAAAPQSCGPEIAAAPARGAALRFQPVAMVPKGAAGFAAEPAGYRGRDAVRRADLFDKMDRAAQRRGQAAPFSPGQVLAGRSYAALAEFVSAGGVRCSSLEGRLGGGGAGGLDWIERHAQAAARLARMQARIGPGAALSVRRVRPSKRAEEGGARLIADRALVDGFCLQGQSLGDVLLAHGWAKSGQNIEALRKALAAALERMRLCA*	.	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0036	persistent	direct	high	911	0.999	GCA_001402725.1_00479
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	64396	65007	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	32906	33517	GCA_001402725_1_2_70	GCA_001402725_1_2_70	-	157765	.	.	hypothetical protein	MTGQDQEQDVERPDGERPDGGRSEARVRAELLGPMAGLRRSRKVTAGDHARDQAMIARRLSYMSRQNLRGLCEMALKQARGVWPEPALLLSWAYGLEQPPPQRSDYVASLLRSAAGREARDGGYLVELMRMARRLGPPPGRYMISKLREEAADNARRRAGLRQMLERGSSLRREDHAWLEAYHADLALAEAMMKSSDAEDRAA*	.	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0037	persistent	direct	high	611	0.998	GCA_001402725.1_00480
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	65181	65846	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	33691	34356	GCA_001402725_1_2_71	GCA_001402725_1_2_71	-	157765	.	PFAM:PF07120.10	replication-protein	MVEAFHGAGIQRAALFKPVGAEEIRDYPLSNEDRLDSHYFVPWERRRWLNSDMRLRGTAECRALYLDLIFISYDQSPVGTLPIDTDILARLVMVDPVHMRALCSLPYGPLHRWERCRCDGGEIRLMHPMVLRTLTEAIARKEDNRAKNEAANAAKRRQRLRITISGYAADLAKNDAALLFMDEWLVSQGCEYRSSVWVERALAAWSDHMLALTMRARSDRP*	phrogs_hmm	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0038	persistent	direct	high	665	0.998	GCA_001402725.1_00481
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	65956	66276	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	34466	34786	GCA_001402725_1_2_72	GCA_001402725_1_2_72	-	157765	.	.	hypothetical protein	MSGAALRIETGRMARFLGLMRDRLALLGDGEIDAVERFCDAAGLVRLVQGPPEGGALVLLAVPSLRMLHFLDRIGCAPWAAMAVAFAGVEVPPELGEVDDLLARAF*	.	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0039	persistent	direct	high	320	0.997	GCA_001402725.1_00483
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	66273	66719	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	34783	35229	GCA_001402725_1_2_73	GCA_001402725_1_2_73	-	157765	.	PFAM:PF10078.8	transcriptional-regulator	MRNGTLISQEDAARRIEDALRLRVGRGRRFSFPALSDATGIPTRTLESYVQGATPQLNALLSICSVLGPSFTSDILAACGQMAHEASPGEPEHLRVAASLGELVMQISEAVADGYVDHREAAQMRPLAARLIELLEPLAYDPAARGRP*	phrogs_hmm	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0040	persistent	direct	high	446	0.998	GCA_001402725.1_00484
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	68107	68325	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	36617	36835	GCA_001402725_1_2_74	GCA_001402725_1_2_74	+	157765	.	.	hypothetical protein	MRRDEPRFLRLRDGLAVSHHPSLSFPAYAAILAATLLFGHLGLRTALNLTLALEPHICHPALAAAPLYPECR*	.	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0041	persistent	direct	high	218	0.995	GCA_001402725.1_00485
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	68395	68688	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	36905	37198	GCA_001402725_1_2_75	GCA_001402725_1_2_75	+	157765	.	COG3750	Uncharacterized conserved protein, UPF0335 family [Function unknown]. 	MLDQTPMKETAADRAVRDRAYAVAADELRQFVEQYEQLDAEKKDIAEQQKDIMAEARGRGYDTRVIRKIIALRKRDKADVAEEEAILDLYKSALGMI*	mmseqs_cdd	nonviral_gene	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0042	persistent	direct	high	293	0.997	GCA_001402725.1_00486
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	68775	68987	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	37285	37497	GCA_001402725_1_2_76	GCA_001402725_1_2_76	+	157765	.	.	hypothetical protein	MTFPVRVEVIDPELDEVIRDTGRCEIDYHTPAGRGWLQGQIMSRLLSGLALKITPLARPRHGIPRGRSET*	.	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0043	persistent	direct	high	212	0.995	GCA_001402725.1_00487
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	69360	70370	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	37870	38880	GCA_001402725_1_2_77	GCA_001402725_1_2_77	+	157765	.	PDB:1Z19_B	Integrase	MPDISIGRLRGGYCVYWHDDTGRRRYQLEARTRKEAESEAIAVYRQKAAASTSVATVSSIWADYVRDLGDKPTAKTMGYTGKAILPAFGHMAPEQIDRTACRAYAAAREAAGISQGSIWTELGHLQSALNYGKKTRLYAGEAVHLWRPPKPDPEKRILNAGEARRLIEHASAPHIRLALILLLGTGARVGAVLDLTWDRVDFERNCINLRIADSKTRKGRAIVPMNASVRAALATAREAALSDSVIEYAGGPVACIRNGVSAAVRRARLGHVTIHELRHTAAVHMLGAGVPLEKVSQVLGHSNTAVTFRTYARYLPNQMDDAVAALDFMNLRRVPK*	common_virus_hmm	common_virus	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0044	shell	direct	high	1010	0.999	GCA_001402725.1_00488
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	CDS	70547	70945	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	39057	39455	GCA_001402725_1_2_78	GCA_001402725_1_2_78	-	157765	.	PFAM:PF00216.20	DNA-binding-protein	MRKSTKKSTAAKAVPPQPVPEELAPEAAPEAAPVAVRVQVKKKDFVERVVLRSGAKKPVVRDLTEAVLAVLGEALAKGETLVLPPLGKISVARSVGKAGGEILHVKLRRMAAPEDAKKDEDSASNPLADAEE*	phrogs_hmm	hypothetical_protein	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_CDS_0045	persistent	direct	high	398	0.997	GCA_001402725.1_00490
GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote	cenote	CDS	79702	81123	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C3	1	1422	GCA_001402725_1_2_84	GCA_001402725_1_2_84	+	157765	.	PDB:1Z19_B	Integrase	MGLVLKHVERTKAGSWQYRRRVPKEVASVITKREFKRKLGDSEKAALAAYPRYHAEVEREIAEAKRRLAGAAAASSSEASDREAYVEALRRRADLIERGATEEDLALEAASLADSFPQDHFEPIGVPPVERHTINLLRLGPKRYPAPAATLEDAKRLYLEERAKSGEAGDALARFAGQVERIVGHVRAALGSDPVLVDLTRDDARRVRDYMLSRFKDNGEKISPASVARDMNGLKAVINFAATELPLPATFQNPFNKLTLGTVRGRASDGEKRDPLPATVLRKVRERIVGHAKADLVLIWRILEGTGCRLAEVTGLRVEDVVTGGEFPHIKVTWHENRRLKTEASRRSVPLAGDALEAAKEALKLPRQGNLLFPAYASERGADAASASLMKHLRTVTKDPKHVVHSLRHNMKDALILAEVATLEQNLILGHALGSVGDRVYGGEVAKLRQTTKAMRKALGLPAVEADGAEDQP*	common_virus_hmm	common_virus	C3	10845	79702	90547	GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote_CDS_0001	persistent	direct	high	1421	0.999	GCA_001402725.1_00497
GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote	cenote	CDS	81393	81938	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C3	1692	2237	GCA_001402725_1_2_85	GCA_001402725_1_2_85	-	157765	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MQSLNIISESGLYALALRSNKPEAKAFRKWVTATVLPTIRKTGSYVRGEEAFDVTTEEGLAAATMHVMAALQAKADGFKAMYEAAKPKADAFAVIEEATGSMTVTEAAKALKAKRVDLYGFLEHRKWVTKGKGRQATAYALRTGYMDTRTHTDTRGRVHTTPVVTPKGLAYLAQIKAQQRA*	common_virus_hmm	common_virus	C3	10845	79702	90547	GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote_CDS_0002	persistent	direct	high	545	0.998	GCA_001402725.1_00498
GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote	cenote	CDS	82173	82658	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C3	2472	2957	GCA_001402725_1_2_86	GCA_001402725_1_2_86	-	157765	.	.	hypothetical protein	MERRFQLRWDEEELARAFRVTPKDVREYLTDGRRVSFIIERRLMWENPGWKLAPSEGAGYDLLDPEGGMWEVRSITRQGVYFNPSNQVGSGRVFNEEGFQAKLSGIKGFILSDIVGFPVVDVFVVPVDNVLRWHRGRALGSNAKISRDKFLNILARDIRHE*	.	hypothetical_protein	C3	10845	79702	90547	GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote_CDS_0003	shell	direct	high	485	0.998	GCA_001402725.1_00499
GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote	cenote	CDS	82730	82972	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C3	3029	3271	GCA_001402725_1_2_87	GCA_001402725_1_2_87	+	157765	.	.	hypothetical protein	MKRVILDAVEIARLMQPTVGQGGFQSLLQYLQGKLDQQTGRIDLTDEDRGKICRYAYDYGNGGWENQLKSIFGNHLSEMN*	.	hypothetical_protein	C3	10845	79702	90547	GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote_CDS_0004	cloud	direct	high	242	0.996	GCA_001402725.1_00500
GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote	cenote	CDS	82974	84203	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C3	3273	4502	GCA_001402725_1_2_88	GCA_001402725_1_2_88	-	157765	.	PDB:1G60_B	Adenine-specific-DNA-methyltransferase	MNQLSIFDQDQFAATAETFIDDLRAFDEFGQRTVTETVEGIPYLINEFWTAGQRQAHSIHEVSYRACFKAQLPEFFINRLTKPGDVVFDPFMGRGTTPVQAALMGRQAFGNDINPLSVLLTRPRLRPITLQAVAAALQTVDWSRGEIEREDLLAFYHPETLRKLEALRLWLAERAPLGGESVDPVADWIRMVAINRLSGHSPGFFSGRSMPPNQAVSVKAQLKINEKLGVSPPDRDVAAVILKKSKTLLKDGCAPSQVRSGLHTGAAWDLRGIADASVDLTVTSPPFLDIVHYAADNWLRCWFAGIDPETVAIDMHRTEEAWTAMVHRVLAEQARILRPSGYVAFEVGEVRNGKVLLERLVWKAAEGLPFNRLGVMVNDQEFTKTANCWGVDNGAKGTNTNRIVLLQRD*	common_virus_hmm	common_virus	C3	10845	79702	90547	GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote_CDS_0005	shell	direct	high	1229	0.999	GCA_001402725.1_00501
GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote	cenote	CDS	84419	85537	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C3	4718	5836	GCA_001402725_1_2_89	GCA_001402725_1_2_89	+	157765	.	TIGR04474	three-Cys-motif partner protein. Members of this family occur regularly as a partner to as a member of family pfam07505, which has been called a phage protein but which seems to occur also in other contexts. Members average about 400 residues in length, but the conserved region covered by the model averages 260 residues and excludes the C-terminus. Conserved motifs suggest enzymatic activity. Note that its frequent partner protein (see pfam07505) has a three-cysteine motif that resembles the Cx3CxxC motif of radical SAM proteins, and that in one branch (see TIGR04471) actually becomes Cx3CxxC. We suggest the name three-Cys-motif partner protein (tcmP), and renaming pfam07505 to three-Cys-motif family protein	MTKQFFEERGDQSVVKARIVQKYFVAWANIIVAAAAKFGDAKIAYIDLYAGPGRYKDGAASTPLLVLEKAIESEPIRKALVALFNDRDQNNSKTLEQEIAALPGIEKLKHKPIVNCNEVGADAEAYFSETKIIPSFTFFDPFGYKGLSLKLINGVIKDWGCDCVFFFNYNRINAGLSNPMVKSHLDALFGVERAESLRGKVENAKPAHRQEMVLEELSNALIEMGAAFVLPFRFKNQEGRLTHHLVFVSKSFKGYEVMKEIMAKESSTEEQGVSSFAYSPADETMPFLFEFQRPLDELGDMLTRAFSGQTISMRDIYCQHSVGRPYLSRHYKEVLGKLEEADKIKVTDPEGKKRRKNSFADRLLVTFLEAAG*	mmseqs_cdd	nonviral_gene	C3	10845	79702	90547	GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote_CDS_0006	shell	direct	high	1118	0.999	GCA_001402725.1_00502
GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote	cenote	CDS	85537	86289	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C3	5836	6588	GCA_001402725_1_2_90	GCA_001402725_1_2_90	+	157765	.	COG4422	Bacteriophage protein gp37  [Mobilome: prophages, transposons]. 	MGTNSRIEWTEATWNPVAGCSIVSPGCTNCYAMRMARRLEAMGQDKYSGLTRTSGGRPKWNGLIRLDESSLRIPLGWKVGRMIFVNSMSDLFHEDVPLSFIQQVFAVMRDCPHHTFQVLTKRSEQLVEVAPYLDWTPNIWMGVSVESEDYKFRIENLRKTPAKVKFLSLEPLLGDLGALNLKGIDWAIAGGESGPAARDMQPEWVRSIRDQCISSGVAFHFKQWGGVNKKKSGRTLDGRTWDELPVSVVA*	mmseqs_cdd	nonviral_gene	C3	10845	79702	90547	GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote_CDS_0007	shell	direct	high	752	0.999	GCA_001402725.1_00503
GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote	cenote	CDS	86416	87132	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C3	6715	7431	GCA_001402725_1_2_91	GCA_001402725_1_2_91	-	157765	.	PDB:4IDH_A	Large-Terminase	MSSSIDLVFMPDGRVVNDTHQDPAIPRVTGFQNYWVAADLGQAHDYSAVCVIKDQALPTVDEGRVIVGSRERTVVFADRFRGVSYVDVVDHLIRLKNVPPFGGKSNLVIDGTSIGRVVSDMLHEQNVPHFAIQMTGGQEWTKKGRYVNAGKTAMIETLAVMFAAGEIKFAHDCPLRAEIEADLASFTTQTTAAGNQIITQGRNGSGHGDLGIALIVGGFASQHLKPQRMEVAHLSGYY*	hallmark_hmm	common_virus	C3	10845	79702	90547	GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote_CDS_0008	shell	direct	high	716	0.999	GCA_001402725.1_00504
GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote	cenote	CDS	87117	87758	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C3	7416	8057	GCA_001402725_1_2_92	GCA_001402725_1_2_92	-	157765	.	PFAM:PF03354.14	Terminase	MRPLVVWATGLLAVFAVIVGQLVLTICIAPAERQAKIIAREIGRQLRRTDLVITRSTLTELEMSNGARVVALPSTSDTIRGFPSVSLLIIDECAFLKGDDDEETRGETLISGVLPMLTTQGQVFFSSTPAGKQNYFAKLFLDAKPDDGIHRIVVKGTAIPRLAEKVERMRRTLSATKFRQEIEVEMLADGASYFDLSIIEQATSTESAICPRL*	hallmark_hmm	common_virus	C3	10845	79702	90547	GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote_CDS_0009	shell	direct	high	641	0.998	GCA_001402725.1_00505
GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote	cenote	CDS	87758	88108	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C3	8057	8407	GCA_001402725_1_2_93	GCA_001402725_1_2_93	-	157765	.	PFAM:PF05099.12	tellurite-resistance	MAALVSAADGEIEDSEVGAILDALSNHATLSAAFKAPEIEAALNKQLARAKGGMAGKLALKREIAEMKDKNTHDELEMAFVIAIDVSLSDGEMEPAEKKVLDDLGKSLGFSLASYL*	phrogs_hmm	hypothetical_protein	C3	10845	79702	90547	GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote_CDS_0010	shell	direct	high	350	0.997	GCA_001402725.1_00506
GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote	cenote	CDS	88496	88774	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C3	8795	9073	GCA_001402725_1_2_94	GCA_001402725_1_2_94	-	157765	.	.	hypothetical protein	MQPPQSRAERFLSRFTRFSDDFGQIPFLPSGQKLVADDDQPGLYLKVGKTAKSWVVQTEVRVLDDKMKPSGCRVERGDVAPFSGAHQERAGA*	.	hypothetical_protein	C3	10845	79702	90547	GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote_CDS_0011	.	unmatched_CDS	none	0	0	.
GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote	cenote	CDS	88843	89715	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C3	9142	10014	GCA_001402725_1_2_95	GCA_001402725_1_2_95	-	157765	.	.	hypothetical protein	MDYASQTDFLSMAREVLAKGPVAVILAEDLVEVESTLRHHLKLGFRTLILCAPTALRLPDDLAAQVHRIPWIADHPEAFVDALNPLIAAAPEGTWFYYGFNAEYLFFPFCETRSIREMLAFHTEERRFGMLSYVIDLYAADLDKNPDGVNLAEAMLDRTGYYALGRPDPDNPGRPRERQLDFFGGLRWRFDEHIPPARRKIDRIALFRTAPGLRLRADHTLSDEERNTYACPWHHNLTAAIASFRVAKALKRNPGSTYDISTFRWHNSVPFAWSSRQLLDLGLMEPGQWF*	.	hypothetical_protein	C3	10845	79702	90547	GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote_CDS_0012	persistent	direct	high	872	0.999	GCA_001402725.1_00507
GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote	cenote	CDS	89818	90546	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C3	10117	10845	GCA_001402725_1_2_96	GCA_001402725_1_2_96	-	157765	.	PRK06476	pyrroline-5-carboxylate reductase; Reviewed	MRIGILGTGAIAEAVVRGIAADGHEITVSDRSATRAAALARDVVGLRVASNQAVLEAADVVILGLVAGVAGAVLPGLRFRPGQRVISLMAGAGLAEVAAWVAPARAEAVMLPYPAIATGGSPILAFGETGLITALFGARNRIFARASEAELADFLVAQAVLSPLALALADTAAWLAPRISDPAAAEVFLRDLVATSLAAGPLRDLLAALDTEGGYNRRLRQHMERAGMTRDLRAGLDRLADP*	mmseqs_cdd	nonviral_gene	C3	10845	79702	90547	GCA_001402725.1|LLVV01000002.1@region_79703_90547@tool_cenote_CDS_0013	persistent	direct	high	728	0.999	GCA_001402725.1_00508
GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote	cenote	CDS	203261	203536	GCA_001402725.1	LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725.1_LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725_1_33	GCA_001402725_1_33@C8	1	276	GCA_001402725_1_33_193	GCA_001402725_1_33_193	+	221400	.	.	hypothetical protein	MRDTLNKSLEVLIWIATTLMVVGACYLGAMVIRLSGVPGVPDPSWVMVFGFLMIIFGVTMSFVFAGICFQIMDIRTFTKHAAFALRMPQKR*	.	hypothetical_protein	C8	7658	203261	210919	GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote_CDS_0001	shell	direct	high	275	0.996	GCA_001402725.1_02916
GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote	cenote	CDS	203551	204903	GCA_001402725.1	LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725.1_LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725_1_33	GCA_001402725_1_33@C8	291	1643	GCA_001402725_1_33_194	GCA_001402725_1_33_194	+	221400	.	COG0515	Serine/threonine protein kinase  [Signal transduction mechanisms]. 	MSAGTQVLKPGSVVQDSYRIESLLGEGGMGATYRAINLATGHPVAVKVMSPAFAANRQAVELFRRESTHLRAVQHEAIIRYETTLQDREGRLFLVMEFVDGKPLKHYLARGQRLGSADVLGLGLRLAQGLDCIHALGLVHRDIAPDNILIPGDNVKKAKLIDFGLASDTIGTDKSIIGTGFAGKLDFCAPEQFGLFGNRVGAATDCYALGLVLMKVAGLAVPGEGKGLAAIEDRRDDIGIDGTRISEPLCRVLERLLVADPAGRATDLVPLFEQALLDTAHRLDKTPAAKAPPPSAVPPLPPAVEPAAGKANARAGLLIALGLVVLLALGGAGFALMGQHGSARSDAVALAGQALQDDDPMARVDALIATGGADNLNAALGSLMKLANDPVQPLEIRREATLAIARMYDPATHDPARSPFAAPDPAAAQRFYQKAAALTEDAAAQARVSP*	mmseqs_cdd	nonviral_gene	C8	7658	203261	210919	GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote_CDS_0002	shell	direct	high	1352	0.999	GCA_001402725.1_02917
GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote	cenote	CDS	204900	206942	GCA_001402725.1	LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725.1_LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725_1_33	GCA_001402725_1_33@C8	1640	3682	GCA_001402725_1_33_195	GCA_001402725_1_33_195	+	221400	.	PF17643.1	Type VI secretion system, TssR	MTLLRFSALIRCALLGLGLPLCSLALACPSRAETPLLMEGKTSLHQRVLIREITPRHSAPDQPLPDRLKPLQAFYVYAREGDWLKVGAEETGADLFWVRASATTDWKQNIVATLEGSENLGRLLFFDGYDSAYGVVEAEDPALAAAALRAEAEAAEAGGPRSERLVALGPRTTVDMRRNLYVMPILSSEEAVFENGNFVNLLQVAVARANPDRAEAPSASAAAPAPLTAADEVPLEDGEAPAPAAPGSGYRAGVVFVVDTTISMQPYIDATRAALTEIYAQAGRSGASDKFAFSLIGFRDDAAAVPGLDYQTRTFVTLQDGASPEKFLAGMEEMTEARVSTRSFREDSYAGIDQAISAIDWTGFGARFIVLVTDAGPREAGDPLSATGLSAEGLSALARERARAAIMVMHLRTPKGAKDHATAEAAYRRLAAQPNGDPLYFPIEQGTPEIYRQKAHDVGAFIVDQVTRFQDGASNLPDAPGVAAEPAPADAGLAAVASVGRTMHLAWLGSQKGEKAPDVFEAVVADRDFDRPGLKPLSIRVLISKSELSDLQEALKIIVQSAEDNVIDPDKFFAQVLGAAADMSRSPDKVKRRADASLADVTAISEYLEGLPYKSRIMAITNDDWLRLSISEQQTVVNELHEKIERYSRYNEATDAWVDYLGTGAGAAALVYPMRLDDLP*	hhsuite_tools	hypothetical_protein	C8	7658	203261	210919	GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote_CDS_0003	shell	direct	high	2042	1.0	GCA_001402725.1_02918
GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote	cenote	CDS	206758	207582	GCA_001402725.1	LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725.1_LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725_1_33	GCA_001402725_1_33@C8	3498	4322	GCA_001402725_1_33_196	GCA_001402725_1_33_196	-	221400	.	6TUI_F	Phage major capsid protein, HK97	MLDPALAFQTAVRAALITAPEVLAHVQPANIRAGSIRPERLPSVVLGDARTEFLGCAAGSQRLARVFVTLHIWAQEDGADTARQIGAAIHAALEFGPKDTAEISLDDWAQPCLVWLRDPQPEGVWRSPACVTHAAFRFGRLACDGKAVEVFPRPRACGQCRGSGGVAPASDGGSNVFEKVRRYRCNCDRGFGLGALPGLAGAALAARASPARRLRANRQAASDRPAPRLRPRCPDNPPRHRWPRCNGCSARSFHAARSPRSAVRKSTDEASRRW*	hhsuite_tools	hypothetical_protein	C8	7658	203261	210919	GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote_CDS_0004	persistent	direct	high	824	0.999	GCA_001402725.1_02919
GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote	cenote	CDS	207575	208054	GCA_001402725.1	LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725.1_LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725_1_33	GCA_001402725_1_33@C8	4315	4794	GCA_001402725_1_33_197	GCA_001402725_1_33_197	-	221400	.	PFAM:PF04883.11	type-I-neck-protein	MAELDLNAQAARLARRLEAIPATVLESLRPAVVQAAEDLAATARSLAPEAEGDLKASIVVTPPGAETPAYAEGGGRRIAGGNQALITVGNPEQRHGHLFEFGTKPHVNAGQFAGTQHPGTAAQPFLLPAARLTEDRARRRIARAIGQAVRKAAQGGDHA*	hallmark_hmm	common_virus	C8	7658	203261	210919	GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote_CDS_0005	persistent	direct	high	479	0.998	GCA_001402725.1_02920
GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote	cenote	CDS	208056	208385	GCA_001402725.1	LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725.1_LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725_1_33	GCA_001402725_1_33@C8	4796	5125	GCA_001402725_1_33_198	GCA_001402725_1_33_198	-	221400	.	CDD:cd08054	Head-Tail-Connector-Protein	MCYIITHAFLDEFSSMPFVTVPELKAQLNIDHDLDDALLSHQIDAAEAHVASFIGAPLTEPLPAAIRQAVLMLAAFWYEAREAAQAGGAPYAVPFGVHDLLQPHRVWVV*	hallmark_hmm	common_virus	C8	7658	203261	210919	GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote_CDS_0006	persistent	direct	high	329	0.997	GCA_001402725.1_02921
GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote	cenote	CDS	208511	209296	GCA_001402725.1	LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725.1_LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725_1_33	GCA_001402725_1_33@C8	5251	6036	GCA_001402725_1_33_199	GCA_001402725_1_33_199	-	221400	.	.	hypothetical protein	MSLVSFAPPGLFKFCAPEHNIFNGCNTIRVGTLWGFRDEENAHLRDEGEGTLDYKIRFPDLTPVSNEWISEIGGDIARNVHIGQMQFSNGIFSIREASIAASYANCWVFCVSTTSDAAGNISCAHNSKWTIPGEKVTDFATYIAQLLWESVDLLDLPATIRDTKSLQEIQRGLSLNAEMRPVTYRDRVIIATCEEDFPVSEVRALKESIPFIKPRSFESEREFRFLFHLSYQGKRISIENRPKILKLRPIDSLAQEWKPRA*	.	hypothetical_protein	C8	7658	203261	210919	GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote_CDS_0007	shell	direct	high	785	0.999	GCA_001402725.1_02922
GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote	cenote	CDS	209340	209636	GCA_001402725.1	LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725.1_LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725_1_33	GCA_001402725_1_33@C8	6080	6376	GCA_001402725_1_33_200	GCA_001402725_1_33_200	-	221400	.	.	hypothetical protein	MFEAPARRNPERNLWLEVLYRTVEDATKGPRHVPKPADKALIMREARDYLTRPSRDLAMVCALAGVDMGAVIARMRENLSKDLRSERPRAKIVDSRKI*	.	hypothetical_protein	C8	7658	203261	210919	GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote_CDS_0008	persistent	direct	high	296	0.997	GCA_001402725.1_02923
GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote	cenote	CDS	210261	210548	GCA_001402725.1	LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725.1_LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725_1_33	GCA_001402725_1_33@C8	7001	7288	GCA_001402725_1_33_201	GCA_001402725_1_33_201	+	221400	.	.	hypothetical protein	MDQGPTLADVLKGAATLSVDPERKKQWLEGLAALSGIQVKRAGNGLKLVSGLTKREFPLALDVAVDLGEAIARAAEQERGDAATPPRPMKVYAII*	.	hypothetical_protein	C8	7658	203261	210919	GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote_CDS_0009	shell	direct	high	288	1.0	GCA_001402725.1_02924
GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote	cenote	CDS	210553	210918	GCA_001402725.1	LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725.1_LLVV01000045.1	GCA_001402725.1|LLVV01000045.1	GCA_001402725_1_33	GCA_001402725_1_33@C8	7293	7658	GCA_001402725_1_33_202	GCA_001402725_1_33_202	+	221400	.	.	hypothetical protein	MTANNERQAPAWKTAKLEALLADIKAENERKRAERNARRWKEERDPVAYEKQKKDQRATYAARKGEAELRRAEAEAKVARIKRDLVLKSLERDEADDALAQRPPDLLEDVLAAVERRLEAA*	.	hypothetical_protein	C8	7658	203261	210919	GCA_001402725.1|LLVV01000045.1@region_203262_210919@tool_cenote_CDS_0010	.	unmatched_CDS	none	0	0	.
GCA_001402725.1|LLVV01000005.1@region_87291_94304@tool_cenote	cenote	CDS	87290	87721	GCA_001402725.1	LLVV01000005.1	GCA_001402725.1|LLVV01000005.1	GCA_001402725.1_LLVV01000005.1	GCA_001402725.1|LLVV01000005.1	GCA_001402725_1_5	GCA_001402725_1_5@C6	1	432	GCA_001402725_1_5_77	GCA_001402725_1_5_77	-	186786	.	TIGR02160	phenylacetate-CoA oxygenase/reductase, PaaK subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA. [Energy metabolism, Other]	MLGLMAPDYLEREVFCRGPEPFMRGVKESLAALGFDLTRYHQESFGPPETAPAPEVEAPEIRFTASGVSTACAPGETVLAAAKRAGLNIPSGCNFGLCGTCKVRKTAGGVQMLHNGGISEDDIAAGCILACGSRPLGKVAVEI*	mmseqs_cdd	nonviral_gene	C6	7014	87290	94304	GCA_001402725.1|LLVV01000005.1@region_87291_94304@tool_cenote_CDS_0001	persistent	direct	high	431	0.998	GCA_001402725.1_00852
GCA_001402725.1|LLVV01000005.1@region_87291_94304@tool_cenote	cenote	CDS	88070	88612	GCA_001402725.1	LLVV01000005.1	GCA_001402725.1|LLVV01000005.1	GCA_001402725.1_LLVV01000005.1	GCA_001402725.1|LLVV01000005.1	GCA_001402725_1_5	GCA_001402725_1_5@C6	781	1323	GCA_001402725_1_5_78	GCA_001402725_1_5_78	-	186786	.	cd06571	Bac_DnaA_C	MRALQPFEAVAEAALAEWVRSNDDAPTPAAIVQLIAARRQPTKMRSIAELVAVQHGVTFAELVGPMKPPHLVAARRDAVGRMMAEGFSTAQIGRTLNRDARSIRQAKPIERAFRDIADRLTRHPAFAGAYVGNKPTAKPENYGSRAIPLADFLAITAREIAEHNARPGRFALAHVGVNFS*	hhsuite_tools	hypothetical_protein	C6	7014	87290	94304	GCA_001402725.1|LLVV01000005.1@region_87291_94304@tool_cenote_CDS_0002	shell	direct	moderate	534	0.983	GCA_001402725.1_00853
GCA_001402725.1|LLVV01000005.1@region_87291_94304@tool_cenote	cenote	CDS	88645	88938	GCA_001402725.1	LLVV01000005.1	GCA_001402725.1|LLVV01000005.1	GCA_001402725.1_LLVV01000005.1	GCA_001402725.1|LLVV01000005.1	GCA_001402725_1_5	GCA_001402725_1_5@C6	1356	1649	GCA_001402725_1_5_79	GCA_001402725_1_5_79	+	186786	.	PFAM:PF08765.10	late-transcriptional-activator	MLGTTLIFPSNRDKAMAEEFGIERAAEIARTAEHLPRRVPLAKEWIAAVWSNQGLTDAEIARRLHVTDVTVRAWRAKKLWRGLRKAKSADPRQLPLI*	phrogs_hmm	hypothetical_protein	C6	7014	87290	94304	GCA_001402725.1|LLVV01000005.1@region_87291_94304@tool_cenote_CDS_0003	shell	direct	moderate	248	0.844	GCA_001402725.1_00854
GCA_001402725.1|LLVV01000005.1@region_87291_94304@tool_cenote	cenote	CDS	89027	90583	GCA_001402725.1	LLVV01000005.1	GCA_001402725.1|LLVV01000005.1	GCA_001402725.1_LLVV01000005.1	GCA_001402725.1|LLVV01000005.1	GCA_001402725_1_5	GCA_001402725_1_5@C6	1738	3294	GCA_001402725_1_5_80	GCA_001402725_1_5_80	+	186786	.	PFAM:PF04233.13	minor-capsid-component	MRIRAHKLDGVEYRAAANIGPVIVPTIVVLHDTAGPLTKGSSAAYLASKNTAGVSVHFVVETDGTITQLVPTHRRATHAGASIYHSREGCNAFSIGIEIVNPGRMEPVDRGDGVVRGRAWWGQMFEDPVGILGLVRKATSSHGDGVWMMSMPYLIYNHGNSMEPRQEHLAWHGLVLPRDHPFWLTHAPINGWGCTCYLSGARSPEAARRRGGDPDKALPAGWDAIDPRTGAPKGIDKGWDYAPGASVARDLAGIVDKKAATLPPPIAKDFKDSVRSVVPPAEDPAAQSPKSPEDAIARGKEVLARLRTQATDLAAAEQAGDLTGAAMALQDAVRAELRKLRPVGEAPIALVPGSRKQAKEVMQSVADVMPSDWVQAANAIPLKVHVSETKRGGYLPGNPPQITTSESSTAVHEYLHHLQARLPDLDALFQDLHRQRTKGEPLIQIRKGEWARKDHYYTAYQGREYAFAKPKPALEMLTMALQPVLGSDIKSVRMLRDLTKGDPEMLEMALGVLFYWKV*	hallmark_hmm	common_virus	C6	7014	87290	94304	GCA_001402725.1|LLVV01000005.1@region_87291_94304@tool_cenote_CDS_0004	persistent	direct	high	1556	0.999	GCA_001402725.1_00855
GCA_001402725.1|LLVV01000005.1@region_87291_94304@tool_cenote	cenote	CDS	90591	90923	GCA_001402725.1	LLVV01000005.1	GCA_001402725.1|LLVV01000005.1	GCA_001402725.1_LLVV01000005.1	GCA_001402725.1|LLVV01000005.1	GCA_001402725_1_5	GCA_001402725_1_5@C6	3302	3634	GCA_001402725_1_5_81	GCA_001402725_1_5_81	+	186786	.	.	hypothetical protein	MSKTRVIAVHDHPRGAGRIEFDIDFATGTIDGLVVDPAHEAYVRSVLNDLSAHPDEPAHFAWQQSYPAPDPMHVPKSMAWQLMAIGWTLEGELAKYPPPEADPLPDGALS*	.	hypothetical_protein	C6	7014	87290	94304	GCA_001402725.1|LLVV01000005.1@region_87291_94304@tool_cenote_CDS_0005	persistent	direct	high	332	0.997	GCA_001402725.1_00856
GCA_001402725.1|LLVV01000005.1@region_87291_94304@tool_cenote	cenote	CDS	90920	91375	GCA_001402725.1	LLVV01000005.1	GCA_001402725.1|LLVV01000005.1	GCA_001402725.1_LLVV01000005.1	GCA_001402725.1|LLVV01000005.1	GCA_001402725_1_5	GCA_001402725_1_5@C6	3631	4086	GCA_001402725_1_5_82	GCA_001402725_1_5_82	+	186786	.	PFAM:PF05069.12	Virion-morphogenesis-family	MITIEFRDGKILAGIDRLQDQLGDMTTFMSDLGELLVASTKARFPAGTDPDGTAWTPNSAATLARKTDSRPLFGTSGSLNSQIFSAAGADYVQIGSDRVYAAMMQFGGTKEQWPHLWGDIPARPYLGLSDEDKENILAETRDWLSGAFSGD*	hallmark_hmm	common_virus	C6	7014	87290	94304	GCA_001402725.1|LLVV01000005.1@region_87291_94304@tool_cenote_CDS_0006	persistent	direct	high	455	0.998	GCA_001402725.1_00857
GCA_001402725.1|LLVV01000005.1@region_87291_94304@tool_cenote	cenote	CDS	91481	92440	GCA_001402725.1	LLVV01000005.1	GCA_001402725.1|LLVV01000005.1	GCA_001402725.1_LLVV01000005.1	GCA_001402725.1|LLVV01000005.1	GCA_001402725_1_5	GCA_001402725_1_5@C6	4192	5151	GCA_001402725_1_5_83	GCA_001402725_1_5_83	+	186786	.	COG4388	Mu-like prophage I protein  [Mobilome: prophages, transposons]. 	MTHKPSTSLALCAAQPLPEGDAPEWVHLLPSAGGTILTHDGRGPYRVTDPAAIIAASLQADARDAGGLIIDENHSADLAAPLGLPSPARGHIVAMEARPDGVWGQVEWNPAGVALLAERAYRGISPVIIHAADGTVRRIARASLVNYPNLRGLVALNSESDMDLTKLARALGLAETATLDEIIAAVEAMTGAKGKPEEDVALQSELGTILGVDGNRDALIAAARLAVSGKDTLIALQAQVTAQAAELKGIRDAANRRCAGGPHSRWSVHPRVGGEQEIDLGAPFLQGGSSPRGRGTALLTAPRCILRRFIPAWAGNRHP*	mmseqs_cdd	nonviral_gene	C6	7014	87290	94304	GCA_001402725.1|LLVV01000005.1@region_87291_94304@tool_cenote_CDS_0007	.	unmatched_CDS	none	0	0	.
GCA_001402725.1|LLVV01000005.1@region_87291_94304@tool_cenote	cenote	CDS	93635	94303	GCA_001402725.1	LLVV01000005.1	GCA_001402725.1|LLVV01000005.1	GCA_001402725.1_LLVV01000005.1	GCA_001402725.1|LLVV01000005.1	GCA_001402725_1_5	GCA_001402725_1_5@C6	6346	7014	GCA_001402725_1_5_84	GCA_001402725_1_5_84	+	186786	.	.	hypothetical protein	MPLFLVVRSGSSPRGRGTEGASCATCSGIRFIPAWAGNSSPADAGRNGSAVHPRVGGEQAPCVSVCRLSTGSSPRGRGTDATGRVREAWERFIPAWAGNRRRCRFPRPTTPVHPRVGGEQSMCLTIEVSGAGSSPRGRGTAAWSFSPNPPARFIPAWAGNSQAAAECGWCRSVHPRVGGEQVRRAEAEHDLRGSSPRGRGTVVCEAPKLAIHRFIPAWAGNR*	.	hypothetical_protein	C6	7014	87290	94304	GCA_001402725.1|LLVV01000005.1@region_87291_94304@tool_cenote_CDS_0008	.	unmatched_CDS	none	0	0	.
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	1	159	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	2	160	GCA_001402725_1_6_1	GCA_001402725_1_6_1	+	95907	.	PRK00174	acetyl-CoA synthetase; Provisional	WAPGLPKTRSGKIMRRILRKIAENDYGALGDISTLADPAVVQDLIDNRMNRA*	mmseqs_cdd	nonviral_gene	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0001	persistent	direct	moderate	119	0.748	GCA_001402725.1_00937
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	162	332	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	163	333	GCA_001402725_1_6_2	GCA_001402725_1_6_2	+	95907	.	COG0563	Adenylate kinase or related kinase [Nucleotide transport and metabolism]. 	MDTAETAQARLAACHAQTAPLIAHYRALGVLQRVDAMQGIDAVAQELGSIVSRVSA*	mmseqs_cdd	nonviral_gene	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0002	shell	direct	high	170	0.994	GCA_001402725.1_00938
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	394	651	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	395	652	GCA_001402725_1_6_3	GCA_001402725_1_6_3	+	95907	.	COG4327	Uncharacterized membrane protein  [Function unknown]. 	MADNSSSNAYWKANVRIILISLAIWFACSFGMGIILRPALSGIHIGGADLGFWMAHNGSIYVFLGLIFTYAVLMNRLDREHGVEE*	mmseqs_cdd	nonviral_gene	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0003	shell	direct	high	257	0.996	GCA_001402725.1_00939
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	667	2586	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	668	2587	GCA_001402725_1_6_4	GCA_001402725_1_6_4	+	95907	.	TIGR03648	probable sodium:solute symporter, VC_2705 subfamily. This family belongs to a larger family of transporters of the sodium:solute symporter superfamily, TC 2.A.21. Members of this strictly bacterial protein subfamily are found almost invariably immediately downstream from a member of family TIGR03647. Occasionally, the two genes are fused.	MDQFTLNLIVVGITFAIYIGIAIWARAGSTAEFYAAGQGVHPVLNGMATGADWMSAASFISMAGIIAFGGYATGAYLMGWTGGYVLLALLLAPYLRKFGKFTVPEFIGDRFYSGGARLLAVICLIVISVTYVIGQMRGVGVTFSRFLEVSTDMGLYIGAAIVFAYAVFGGMKGITYTQVAQYVVLIIAYTIPALFISFNLTGNPIPQLGLIGGYAPSGGDVAFLAKLDAVVTELGFKAYTADSSNYFDMFLFTMSLMIGTAGLPHVIIRFFTVPKVADARSSAGWALVFIALLYTVAPAVGSMARLNLTTSMWPAAVTGNAFDGPAVSRADIDSKPELEWVKNWEKTGLLAMKDLNGDGLIQYVSEPAKLAANTKAMDEAAKAKDEAKLAALTTEREGLLATEQLAKTGKTFAELGLKGNEVVKVDNDIMVLANPEIANLPGWVIALVAAGALAAALSTAAGLLLAISSAISHDLIKGSINPNISEKGELLAARIAMGGAIVVATYLGLNPPGFAAQVVALAFGLAAATIFPVLMMGIFSKRVNKEGAIAGMLVGLVFTAVYIFIYKGWFFIPGTNNLPDTPANYMFGISPLSIGTVGAVMNFLTAFVVSAITKAPPQSVIDLVESIRVPKGAGKATHH*	mmseqs_cdd	nonviral_gene	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0004	shell	direct	high	1919	0.999	GCA_001402725.1_00940
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	2676	4502	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	2677	4503	GCA_001402725_1_6_5	GCA_001402725_1_6_5	+	95907	.	pfam03445	Putative nucleotidyltransferase DUF294. This domain is found associated with pfam00571. This region is uncharacterized, however it seems to be similar to pfam01909, conserving the DXD motif. This strongly suggests that members of this family are also nucleotidyltransferases (Bateman A pers. obs.).	METDQKAITAFLETVHPYDTLPRDELADVARSFRRMEFRPEALIYVYQTPLGGLYLVKQGAVEITDGNGGLVSLLGPRNSFGERGLMRDGLAATQAKATEQTICLVLPTPTFKRLIETYPAFERFFNRKRGEKVSTEIATQKVADLIARKPLSCGPDTSVVAAAKMMRDAHVSSLGVVAEAERLLGIVTQRDLSNKVLAGELPGSTPVASVMTPDPVSLPPDALGSDILNIMLERRIGHLPITAEGRFVGMITQTDLTRFQAVSSAVLIRDVVSAETVADLAQVAGRIPQLLVQLVGGHHAHDVITRMITDIADAVTRRLLVMAEHELGPPPVPYLWLACGSQGRQEQTGVSDQDNCLIVEDAATAEDMGYFRALAKIVSDGLDACGYVYCPGDMMATAERWCQPARVWRDYFTGWIAKPSPEAQMLASVMFDLRPIGGGGIAMFEALQAETLELTAKNSIFVAHMIANSLKHTPPLGLLRGFATIRSGEHRNHIDMKMNGVVPVADLARIYALQGRLAPVNTRARLKAAEEAGVISPSGARDLIEAYDLIAAMRLDNQVTLIKSGRAPDNFLAPSDLSDFERAHLRDAFVVVRTMQSAVGHNKAVVS*	mmseqs_cdd	nonviral_gene	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0005	persistent	direct	high	1826	0.999	GCA_001402725.1_00941
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	4502	5029	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	4503	5030	GCA_001402725_1_6_6	GCA_001402725_1_6_6	+	95907	.	.	hypothetical protein	MSNDLITMLAAGLFAAIVLYAARHATQKLLRRSLPTWLTPAAAGLAMILATVWGEYRWFADASARLPETAQVISANAASEPWRPWTYLWPVTTRFVALDGANRARPAPGVVATNLYLVARWQPVQPVTVAYDCVGGRQAVLGGEAAVTADGSLTSGAWSAAPEGDAGLKAACAGG*	.	hypothetical_protein	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0006	shell	direct	high	527	0.998	GCA_001402725.1_00942
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	5031	5435	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	5032	5436	GCA_001402725_1_6_7	GCA_001402725_1_6_7	+	95907	.	COG0745	DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]. 	MNHDAAGRDRKRRVLIVEDEDNIAIALDYLLGREGLERVRIATGLGAVKRIRDDRPDLVLLDVMLPEVSGYEICQEVRADHSLSAVRIVMMTARGSALERRKALALGADGFIAKPFELKELRDELHRLLDGGGL*	mmseqs_cdd	nonviral_gene	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0007	persistent	direct	high	404	0.998	GCA_001402725.1_00943
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	5435	7537	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	5436	7538	GCA_001402725_1_6_8	GCA_001402725_1_6_8	+	95907	.	PDB:5M1S_D	DNA-polymerase-III-subunit-alpha	MPLTRLSLRLRIFLFFAALALGNLVALVAGLVFGFEKLGHSEALDGFVIGGVVAGLVITGLIVSVWYLFDENLAKPIERLAGHIRARTHTAIDTELDQTAGRYLGDLAPAAAAITQHLNETRSALTESVQRETIRLAQEKERLEALLSDVPVGVLLCSATHQLVFYNGQAVDLLGGAHAPGLDRRVFDYLNRAPILHAYERLLQATDPDAASDLLCATTADGRTLAARMRLISEGEDHAVTRKAGYVLTLRDVSADMLAHAGREALMDELFDRIRRPAAALQSLIGVLIADDGPTEPQARAQLRGAAQSEAGHLAQAIHTLFERHEAMRADWWPLAMIRASDFGEAVKARVAAEGAGDLLAVSAPLMLRIEGFEMVALIATLVARLGPGRGDKRLEILEEGAGALIALEWQGEAVAIAELEAWLSAPLDVGMADVTGRRVLAAHAADIWPERLHDGRHRLCLPLREARRIGNGPRPVARKVVYDFDLLGREKENEIAHTPLEKLTFVVFDTETTGLLPTEGDEIVQIAAVRIVNGRRVASEVFDTLVNPGRRIPAVSTAVHGITDAMVADAPDIIEVGRRFHKFAEGAVLVAHNAPFDLEFLRRKELLIGLNFDHPVLDTVLLSAVVFGQSEVHSLDALTHRLGITIPEEARHTAIGDTVATAEAFLRLLPSLKSRGLTTFGAVVAEVRKHGRLLRDANG*	common_virus_hmm	common_virus	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0008	shell	direct	high	2102	1.0	GCA_001402725.1_00944
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	7835	8143	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	7836	8144	GCA_001402725_1_6_9	GCA_001402725_1_6_9	+	95907	.	.	hypothetical protein	MNGFVSPFRRDLCTRTCAKAAIRGSLLPDASRSSSSHAFSFAVTGEPKISMIAFAAVTPTACSSEIRIRYAGSTSSALASEGTRSSGNLLLPDFRIEMKFAF*	.	hypothetical_protein	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0009	shell	direct	moderate	206	0.667	GCA_001402725.1_00945
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	8575	8781	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	8576	8782	GCA_001402725_1_6_10	GCA_001402725_1_6_10	+	95907	.	.	hypothetical protein	MTINVNDYPQLRQLCWNRPDRAVVDGRTALALYERNWRFVDHDAFTPREQELLDRLVADYGNGHLMVA*	.	hypothetical_protein	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0010	shell	direct	high	206	0.995	GCA_001402725.1_00946
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	8781	9500	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	8782	9501	GCA_001402725_1_6_11	GCA_001402725_1_6_11	+	95907	.	4OK0_A	Putative	MAASKVAELFTRRHHNDILHVLRCLNGDFLRDAECYFGGGTAIVLELGEYRESVDIDFLCASQEGYRKLRQALWGRSDLAGYLRPGAELALLRDVRMDQYGIRTLISVGDVAIKFEIVREARIGLTGEIDARYGVPVLSRDHMFAEKLLANADRWNDTGVLSRDILDLSMMMSRWGAVPEAAWALAEGAYGDTVRKSYDKAVERIRKPEWLRKCMHDMAMDPNLETEILAVHGGPVSPV*	hhsuite_tools	hypothetical_protein	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0011	shell	direct	high	719	0.999	GCA_001402725.1_00947
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	10167	10373	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	10168	10374	GCA_001402725_1_6_12	GCA_001402725_1_6_12	+	95907	.	.	hypothetical protein	MRFILLGAGASKSYDASPTGQRMPIARDFFSTFFKLNAATNPWVLRDGLIHYLQSEKGIMDTDAFLAA*	.	hypothetical_protein	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0012	.	unmatched_CDS	none	0	0	.
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	10482	11102	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	10483	11103	GCA_001402725_1_6_13	GCA_001402725_1_6_13	+	95907	.	cd01413	SIR2_Af2	MFLFATTLNEIANGPVSQSHIDLANYLKPEDVVLTFNWDTLVDLAMMEATEWVSDSGYGIKPHRIFRDGWVDLIEKSSANALIKLHGSVNWLTAHPVYDGEELVLTHALPADSLFVYEYATRPYATHAGRYTGGYAKMTYGYYPPNLTDIPGRSAPEGYVIVKVQSEMSWMPKGQSGEQGIVSMPLIIPPVKTKSYQFFGTLFERL*	hhsuite_tools	hypothetical_protein	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0013	shell	direct	high	620	0.998	GCA_001402725.1_00948
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	11474	12046	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	11475	12047	GCA_001402725_1_6_14	GCA_001402725_1_6_14	+	95907	.	PFAM:PF13701.5	Transposase-DDE-domain-protein	MAQMGFFDLSDRYASLDAKRDPLVEIDALVPWEEFRPVLERVWRKPEAARKSRAGRKPMDAVVMFKTLVLGALYNLSDDQIEYQVRDRLSFMRFLGLGLQDRVPDAKTVWLYREGLAQAGVVEALFRQFDGYLARQGYIARGGQILDASIVPVPRNHNTREENKAIKAGEMPEGWADKPANCARGRARIG*	common_virus_hmm	common_virus	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0014	shell	direct	high	572	0.998	GCA_001402725.1_00949
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	12176	12451	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	12177	12452	GCA_001402725_1_6_15	GCA_001402725_1_6_15	-	95907	.	.	hypothetical protein	MTEEDRRESWKFAVVAGWVPFTFQSRDGDAVECRVLKVRAGKTFFGASKNTFRVFKGLETGRFIFISEHSTTLKAMWGVFKLMTEMGVRGG*	.	hypothetical_protein	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0015	.	unmatched_CDS	none	0	0	.
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	13002	13583	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	13003	13584	GCA_001402725_1_6_16	GCA_001402725_1_6_16	+	95907	.	PDB:1ZR4_E	gamma-delta-Resolvase,-site-specific-recombination	MLIGYARTSTLDQKAGLDAQRRDLEAVGCERIFVEQVSSVDVVSRAQLAEALTFAREGDTLVVTKLDRLARSVAHLVGILGQLEEKGVALRILSMGIDTATPTGKLMLTILGGVAEFEREIMLERQREGIAKAKAEGKYKGRAPTARAKAEEVLRLHAEGIGGTEIAKRLGIGRASVYRIIGDGIAAEATSEA*	common_virus_hmm	common_virus	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0016	cloud	direct	high	581	0.998	GCA_001402725.1_00950
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	14221	14358	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	14222	14359	GCA_001402725_1_6_17	GCA_001402725_1_6_17	+	95907	.	.	hypothetical protein	MKRTSQTRHNRITNRPCLSGGGYKSKEINLNQDTTSDTRACEAMP*	.	hypothetical_protein	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0017	shell	direct	high	137	0.993	GCA_001402725.1_00951
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	14355	15014	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	14356	15015	GCA_001402725_1_6_18	GCA_001402725_1_6_18	+	95907	.	.	hypothetical protein	MTARICAVPHCGSPAASDYSPHCRRHKSTLRRHGAPDQSGVTKTELAPYLARIGARIAKNPDNETWPLLEAAWANIVTEAEATASRRIGNRYARNAANEIVGIAQDVAPGTVVATVLAMVLMWHDRPLRFRTDDALRVQIARRVRALSGRHVGLRYDHRTGQQIRVYREMTPKAAALLGRQLMLAFGATGLHLAALDERDRKAATETKQRLATAISNLQ*	.	hypothetical_protein	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0018	cloud	direct	high	659	0.998	GCA_001402725.1_00952
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	15011	15553	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	15012	15554	GCA_001402725_1_6_19	GCA_001402725_1_6_19	+	95907	.	PDB:1JL1_A	RIBONUCLEASE-HI	MKDEPLNQAMTAALPPVPTCIVIYTGSSWQTQLGVGGYAAILCRYRDGKIEKRRPVTGGAVETSNIQMEMSAVIDALKQIRRDETAPIFVFTCNDLIMKGMTEWLPGWVAKGWRNGKGKRVENVDLWQEIVQLCEGLSVTFRWARNQPGNPMNDEVARVATKECDKWVRQHCRELFGDAA*	common_virus_hmm	common_virus	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0019	shell	direct	high	542	0.998	GCA_001402725.1_00953
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	15625	16326	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	15626	16327	GCA_001402725_1_6_20	GCA_001402725_1_6_20	+	95907	.	PFAM:PF05766.11	HNH-endonuclease	MIETQSCSTPSPEAKASVLPAQPSETEPTASICPRCGASFKPRSNKTYCTSTCAKAAIRNRTRGPRADASDDRYRNYRSFGCLHWLNETYYMTPPGARLGLLKDWLDAARAGNAHLAHVLTNPMFFAPAEERKKSVSFRGKRAYPPIPFLADMYCRKFLGCRVWQWTNGTTSEPETGEVQTALPRKRPSGIRSETANLSNEKETRTIYVSQDPQAFLGWLKAQRDPEEMKTAA*	phrogs_hmm	hypothetical_protein	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0020	shell	direct	moderate	428	0.61	GCA_001402725.1_00954
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	16420	17970	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	16421	17971	GCA_001402725_1_6_21	GCA_001402725_1_6_21	-	95907	.	PDB:1Z19_B	Integrase	MVLQMARPQKNPKSGVYYFRQKTPADLVAVFGRKEVSRSLGTKDPAEAKERNIDAVRKQALIWDRLRKRPEPLPHQQIVALSGVLYRDHMAAMELEPGEPGVWVETLKLLDRIAATPEALERWYGPTVDTLLLERGIVTDDTSRQRLIQETDRAFRQVAEQQLKRAEGDYSPDPRANRFPPVEAATAPANAPTEKLSITALFKLWERDHLANGKSARTVGDFRQKIESLIAFLGHDEARNVTAENIADWCDHLRHEKGLAARTVSQKYLTVIKVIFGVAVEKRKLKENPAKENRVRFTKPQRLRQKGFTDDEANAILKAALADPAELGRRTTENKRAIRWGPWICAFSGARITEVMQMRTDDLVEDHGVLCLRITPEAGSVKTGTFRLVPIHPQLLDMGLARMFRALPPGPVFYSLAPVRGKPADPVERAQSAGAKVGQWVREVVGISDPNVQPNHAWRHRFKTVAREVGIAPEYSDAITGHEDGRAASDYGETTVKALWREVQKLPRYEVTAKRM*	common_virus_hmm	common_virus	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0021	shell	direct	high	1550	0.999	GCA_001402725.1_00955
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	18212	18610	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	18213	18611	GCA_001402725_1_6_22	GCA_001402725_1_6_22	+	95907	.	.	hypothetical protein	MKRASFADSIKPEHKRMSRLLGYCLTLSSVDAWLSFSLIARVRLSAIERGALAYALLKSLDRDTAEMTAAAVIGQGGDPLPPFLGGMDDARQWASWASPQELKAYALAAFEAMPPKDQAAFHRHISTMEVAA*	.	hypothetical_protein	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0022	shell	direct	high	398	0.997	GCA_001402725.1_00956
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	18607	19161	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	18608	19162	GCA_001402725_1_6_23	GCA_001402725_1_6_23	+	95907	.	CDD:cd08054	Head-Tail-Connector-Protein	MRMLVNREYTGDQLPFSLFELKTHLRVDHNDEDLAIQDIGLTAAADVESFAQIALLSQLIRVNIFEPAIGCHGIKLPIGPVLDAASVAITVDGEAFTGFEVATGGRPFVTWKASYAELVPSRLGIEYTAGFGASASNIPADLRLAIMDQAAAIYDGRSPSDAKTLATSPHMARIGARYRGVSVS*	hallmark_hmm	common_virus	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0023	shell	direct	high	554	0.998	GCA_001402725.1_00957
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	19158	19394	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	19159	19395	GCA_001402725_1_6_24	GCA_001402725_1_6_24	+	95907	.	.	hypothetical protein	MTDIELDQILTFKWPMIIRRVMADVNADGFAKGFVRSIARHGKRKDWRPSQRQERVMRQMLIDYSADREPEPELFERE*	.	hypothetical_protein	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0024	shell	direct	high	236	0.996	GCA_001402725.1_00958
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	19745	21397	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	19746	21398	GCA_001402725_1_6_25	GCA_001402725_1_6_25	+	95907	.	PFAM:PF03354.15	Large-Terminase	MAKENTAALADLFGGSGPNAPKSIGPKTEVLPVPFSLLKKIGGKSQSVRAIQFLGLLHIPEGKKAGKPLKLADFQRKFVKGALAKKIMVGVLSIGRGNAKTALSAGLALAELVGALEENPQPKREIIFAARNRDQAKTAFQFLVGYIQGLPDADQSLFTIRRGSKLEVEFDGNGGGLARVIAADGKSILGGAPTLAIMDERAAWEREKGDSLENAILSGLGKRDGRALIISTSAPDDANTFSRWLDDPPPGTYVQEHRPPFGLPADDLDSLLIANPGATEGIGAAPEWLVSQAQRAIARGGAALSSFRNLNRNERVSTEDRSVLVTVDEWMSAEVSPDDLPEREGPCILGVDLGGSRSMSAAAFYWPETGRLEALGTFPAAPSLADRGASDGVSDRYCQMQERGELSVMGEATVPPGPWLAQIVQHLDGITPDCIVGDRFRHAEFTEAMQAAGLGRVPFIWRGFGWKDGSEDVERFRRALFDGEVKVVPSMLLRFAFADAITLIDPAGNHKLAKARSLGRIDAAAATVLAVAQGARMKAAPVRKARALWL*	hallmark_hmm	common_virus	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0025	shell	ambiguous	low	9	0.005	GCA_001402725.1_00960
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	21388	21729	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	21389	21730	GCA_001402725_1_6_26	GCA_001402725_1_6_26	+	95907	.	CDD:pfam05521	Head-Tail-Connector-protein	MAVNVARLDRRVQFLRAVTGDDGFGNVTLSWAAHGGTVWASRKDISDAEQVAAGRVLATVTARFVVRHSSFSAGLTPADRLSCDGATWEIEGIKEVSAPRRGFLEVTATKGAV*	hallmark_hmm	common_virus	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0026	shell	direct	high	341	0.997	GCA_001402725.1_00960
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	21726	22061	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	21727	22062	GCA_001402725_1_6_27	GCA_001402725_1_6_27	+	95907	.	PDB:5H0M_A	HNH-endonuclease	MSKRDDFARHSKAVTRTKRWAVLRQQILERDGWACQRCGKRALRLEVDHVKPVRLRPDLAFDPRNLQSLCGPCHTRKTRIECGHKEKSPERKAWADAVAELATETATREKE*	common_virus_hmm	common_virus	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0027	shell	direct	high	335	0.997	GCA_001402725.1_00961
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	22065	23330	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	22066	23331	GCA_001402725_1_6_28	GCA_001402725_1_6_28	+	95907	.	PDB:3QPR_G	Major-Capsid-Protein	MLESVKIARRQSEIRQKLAELAGKPTPTEDEIRSMEALDGEYRANETRYRAALIAEDTERREAGADLETRAGREWSELVAGFQMRQVIAVLNGEGRPLDGRTAEVVTELRNAGGYRGIPVPLLALEARAGETVSTGTPDPVQTRPIIDRLFPASVAARMGAQMIAIGAGAVEWPVATSTVSAGWATGETGAVAGPTAYATTDKALKPEQTLGVQMRITRKALMQSGEALEAAIRRDMAGAMQAELDRAIFLGTGANGQPLGVIIGAATYGITATAVDAAASWATFRNAVVRFMARNAASTPADVLALIRPEVWSFMEDQLTATAAPKYEFDRMAEKLGGIAMSSTALAAPTGTPAACNALLTTSAGGVAPIFVGMWGAVDLIRDPFSDAASGGLRLTALTTCDVTVARGAQLELLTGVQVA*	hallmark_hmm	common_virus	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0028	shell	direct	high	1265	0.999	GCA_001402725.1_00962
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	23330	23884	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	23331	23885	GCA_001402725_1_6_29	GCA_001402725_1_6_29	+	95907	.	CDD:COG3740	head-maturation-protease	MLWGAASGALEIRSEGGATALRAVFPYGAETELAPGKREVFAPHAFRARIEAGEEIHLLAQHNYQWPLASTAAGTLRLRSTDLAVEIEATVDGATSWGRDFLAAHRAGLIRGLSPGFRVPNGGERVERRGADLVRTVTQAALFEVSAVTVPAYPQAQIEARGWETHQDRQPFRGAVNPLNRWRL*	hallmark_hmm	common_virus	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0029	shell	direct	high	554	0.998	GCA_001402725.1_00963
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	23887	24954	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	23888	24955	GCA_001402725_1_6_30	GCA_001402725_1_6_30	+	95907	.	CDD:pfam04860	Portal-protein	MWPFKRKTETRSAMAAGYTAQIIAARESYVAGVSGIAELTATVQTCVSLWESAFAQADVTGTDLLDRRTMALIARSAAIRGEAVLLIRDRLIPCADWDLSTKDGTPRAYRVTVPEAGGSTSTTVLAAEVLHLRLGVDPVAPWTGQAPLRRASLTASLLHEIETALRDTWRDAPIGSQIAHMPEGSADDMAAMRSAFKGRRGSALIVEGVAQAVGAGMHPNAGKVPDQLTPDLQRAMPADLLDAARGAICAAYGVLPAMFSLSAQGPLVREAQRHLAGWILQPMAELLAEEASAKLGGAVMIDVGRPLQAFDAGGRARALSQLIEAMGRAKELGLSPEELAGALKAVNWGGGDALA*	hallmark_hmm	common_virus	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0030	shell	direct	high	1067	0.999	GCA_001402725.1_00964
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	25092	25313	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	25093	25314	GCA_001402725_1_6_31	GCA_001402725_1_6_31	-	95907	.	.	hypothetical protein	MIEVGKKYTLVMLELTDAGYCKGSTGVTVTGRDGNLIEVNGCEVINTASPLFHSLTDDEGQKAYFEKLEASLF*	.	hypothetical_protein	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0031	shell	direct	high	221	0.995	GCA_001402725.1_00965
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	25306	25647	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	25307	25648	GCA_001402725_1_6_32	GCA_001402725_1_6_32	-	95907	.	PFAM:PF16777.4	partition-protein-ATPase	MAKQDDWIRITLRLPRDLHARITAAVGAASLNATIVTSLEERFPVSAEERLRALLDEYDEAMAEDGPNKENLRKLYEWGRQILERELRAKKTRKPLRRLPQHRKQKVEEINDD*	phrogs_hmm	hypothetical_protein	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0032	shell	ambiguous	low	9	0.026	GCA_001402725.1_00965
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	25821	26180	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	25822	26181	GCA_001402725_1_6_33	GCA_001402725_1_6_33	+	95907	.	.	hypothetical protein	MPAINPASGNAPGLPAARISPFNSADEPNSVRYVRVLLDIPALGYREGDLIELTPVDRIDADAKFRLITGEIAQFSMWPGGKFRVVSPDGAIHFLDRDECHAIVIGRVTRVFRDVCYLQ*	.	hypothetical_protein	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0033	shell	direct	high	359	0.997	GCA_001402725.1_00966
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	26654	26935	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	26655	26936	GCA_001402725_1_6_34	GCA_001402725_1_6_34	+	95907	.	.	hypothetical protein	MIEDAALDSILIAEAEQSFGVAGMRTPEWLIIWANGKTQFYYDEDISEETFFGNTFFADDHIQGPVILFCMGAMAHMVLDRLPRPAIRLAQGA*	.	hypothetical_protein	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0034	shell	direct	high	281	0.996	GCA_001402725.1_00967
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	27146	28210	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	27147	28211	GCA_001402725_1_6_35	GCA_001402725_1_6_35	+	95907	.	PDB:1Z19_B	Integrase	MPRHKQPARLYFRHDERQWVIRDGSTQKRTGYGLEQRGEAEAALAEYLARKQIERRHGPAHPGELTVGEVLALYAEDRGRLLASPQTLACSIQALAPFWADLTCDAVKGSTCRRYERERAKPRKIETTSKTGKAISRVVTAGASTVRRELGVLQAALNYAHQEGILIHPITVSLPDAGEPRDRWLTRQEAAKLLRHAEPHVRRFILLSLYTGRRASAILELTWTRIDLDQGTVRFREEGQAETNKRRGRIRLPRQMRGHLSRWGTHRGTHVVMYRGKPVQNIKTGIRRAAERAGLEDVSPHVLKHTAITWAISAGLGVEDAAEYFNTSPETIRKHYWHHSPHHQEPALEVIERR*	common_virus_hmm	common_virus	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0035	shell	direct	high	1064	0.999	GCA_001402725.1_00968
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	CDS	28457	28621	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	28458	28622	GCA_001402725_1_6_36	GCA_001402725_1_6_36	+	95907	.	.	hypothetical protein	MTKDTPSRKTASDATRDARLAAALRANLTRRKAQARARSAEENNNETAETGPEE*	.	hypothetical_protein	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_CDS_0036	persistent	direct	high	164	0.994	GCA_001402725.1_00970
GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote	cenote	CDS	93071	93889	GCA_001402725.1	LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725.1_LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725_1_8	GCA_001402725_1_8@C5	1	819	GCA_001402725_1_8_91	GCA_001402725_1_8_91	-	190413	.	PRK11132	serine acetyltransferase; Provisional	MSKIRAKVAAIDPVWMRICEEAHDAVGQEPLLGALIHAGLLHHATMEKALAYRFSLKLASGEMSEQLLREIADDAYGSDPDLGAAARADLVAVHDRDPACHRFLQPILFFKGYQALQSYRIAHWLWRQGRKDMAYFVQMRTSEAFGVDIHPAARIGRGVMIDHAHSIVIGETAVVGDNVSMLHSVTLGGTGKEEQDRHPKIGNGVLIGAGAKVLGNIHVGDNSRIAAGSVVLADVPRCKTVAGVPAKIVGEAGCAQPSVNMDQQLRGCDCEG*	mmseqs_cdd	nonviral_gene	C5	16657	93071	109728	GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote_CDS_0001	persistent	direct	high	818	0.999	GCA_001402725.1_01215
GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote	cenote	CDS	94251	98165	GCA_001402725.1	LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725.1_LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725_1_8	GCA_001402725_1_8@C5	1181	5095	GCA_001402725_1_8_92	GCA_001402725_1_8_92	-	190413	.	PFAM:PF13550.5	tail-protein	MATILLSAAGAAIGGGFGGTILGLSGAVIGRAVGATLGRVIDQRLLGSGSQSVETGRVDRLRLSSASEGEAVGRLWGRMRVAGQVIWATRFFETAQVEKSGKGAPRATVARYSYSLSLALALCEGEILRVGRVWADGSEIEVSSLNMRVYRGGEDQLPDPKIAAVEGAEAAPAYRGIAYVVIEDLHLAPFGNRVPQFTFEVVRAAQGALAEAEPDLTRGLRAVALIPGTGEYALATTPVYVGTETGITATQGVANQTAPGGQTDLVAALQRLDEELPNCGAVSLVVSWFGDDLRCGACDVKPKVASRQEEGANMPWRVAGLERAGAEEVPRLSSSSVYGGTPADAAVIEAIGALRAAGKAVTFYPFILMEQLAGNGLPDPWSDATGQPALPWRGRITLSVAPGRAGSPDGTAAAVAQVAGFFGTAQPGDFAIAGGQVVYSGPEEWSMRRFILHYAHLCKLAGGVDAFCIGTEMVALTQIRGAANSYPAVAAFRQLAGEVKAILGPGCKIGYAADWSEYWGHAPGNGDRFFHLDPLWADENIDFIGIDNYLPLSDWRDGEDHADAGWGSIYALDYLRANIEGGEYHDWYYAAPEHRDAQIRTPISDGDHDEPWIWRAKDIRNWWLNDHHERVGGVRSEVATAWVPQSKPIWFTEMGCAAIDKGTNQPNKFLDPKSSESSLPHHSDGRRDELIQMQYLRAMTSYWGEAAKNPVSAVYGGPMLDMSRAHVWAWDARPWPQFPLNTALWSDGANYARGHWISGRAVAQPLASVVAEICGLAGITDIDVSGLYGLVRGYTMTGDQTGRAGLQALMLAYGFEVLEREGKLVFRMRDGRIDADLVAADLALGEGGSMVETVRAAEAEIAGRVRLAYVEAEGDFEVRAVEAVFPDVAAGAAAGSELPLALTRAQAQGIVGRWLAEARVARDTARFALPPSQAHLGTGDVVRLDLPEGKRRYRLDRIEQAGLLQVEAVRVEPGIYAPADEVEDPANLRPFAAPVPVRAVFLDLPLMKGDEDPVAPHLAVTATPWPGTVAVWSADEDAGYALNATLGTRAVIGQTLTPLFRAPPGLWDRGAALRVKLASGALESATALRVLNGANAMAIGDGSSDKWEVFQFVEAALVDGKVWEISLRLRGQLGTDALMPEVWPEGSVVVALNGAPEQILLPASARGLARHYRIGSAARSYDDPSFVHRIEAFAGAGLRPFSPCHLRATPGASGWDFRWLRRTRIDGDSWQGYEVPLGETAELYLLRVIEGTAVKRELTVGAASWSYPAALQAADGIAGGFTLEVAQVSDVYGPGLAARITVGA*	common_virus_hmm	common_virus	C5	16657	93071	109728	GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote_CDS_0002	persistent	direct	high	3914	1.0	GCA_001402725.1_01216
GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote	cenote	CDS	98166	98618	GCA_001402725.1	LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725.1_LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725_1_8	GCA_001402725_1_8@C5	5096	5548	GCA_001402725_1_8_93	GCA_001402725_1_8_93	-	190413	.	TIGR02219	putative phage cell wall peptidase, NlpC/P60 family. Members of this family show sequence similarity to members of the NlpC/P60 family described by pfam00877 and by Anantharaman and Aravind (). The NlpC/P60 family includes a number of characterized bacterial cell wall hydrolases. Members of this related family are all found in prophage regions of bacterial genomes. [Mobile and extrachromosomal element functions, Prophage functions]	MSAIGLRAVAIARDWIGTPYRHQVSVQGAGTDCLGLLRGVWRALYGAEPELVPPYTADWSEPAREEVLWRAAARHLLALPPARGPERPGEVLLFRMRHGAVAKHLGIAAEIGAGASFVHAYTGHGVVESPLSEPWARRIVARFQFPEGGR*	mmseqs_cdd	nonviral_gene	C5	16657	93071	109728	GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote_CDS_0003	persistent	direct	high	452	0.998	GCA_001402725.1_01217
GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote	cenote	CDS	98615	99505	GCA_001402725.1	LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725.1_LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725_1_8	GCA_001402725_1_8@C5	5545	6435	GCA_001402725_1_8_94	GCA_001402725_1_8_94	-	190413	.	PFAM:PF05100.11	Minor-tail-protein	MAYPQDLKAHLQGGVTTLARAWALARTDGRVLGFTDHDRGLSFEGIAFEPGSGMTAKAVLQGTGLSVDNTESYGALSSEAITEADLLAGRYDGAAVTVWLVNWADPGMRAVIFRGHLGEVSRGAGAFTAELRGLTEALGLDQGRIYHPRCAAVLGDGKCRFDLTKDGYALETALGAIEEAVVLRLAEGAGFEDRWFEKGRLLVLEGAAAGLVGVVKNDRLQADGSRIIELWQRLGADPVAGDRVRIEPGCDKRAETCRLKFDNFLNFRGFPHIPGEDWLVSYPVQSGTNDGGSLFK*	hallmark_hmm	common_virus	C5	16657	93071	109728	GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote_CDS_0004	persistent	direct	high	890	0.999	GCA_001402725.1_01218
GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote	cenote	CDS	99505	100137	GCA_001402725.1	LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725.1_LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725_1_8	GCA_001402725_1_8@C5	6435	7067	GCA_001402725_1_8_95	GCA_001402725_1_8_95	-	190413	.	PFAM:PF09343.9	glycoside-hydrolase	MAFHEVRFPANLSFGSVGGPERRTEIVTLASGHEERNSPWAHSRRHYDAGVGLRSLDDVERLIAFFEARAGQLHGFRWKDWADHKSCPASRAVAHEDQLIGIGDGVTTAFQLVKTYASGGQSYLRPIVKPVEGTVKLGIAGDHQAEAVNFALDPTTGIVTFNEAPSKGARVTAGFEFDVPVRFDTDRIAVSVQSFQAGDLPQVPVLEVRI*	phrogs_hmm	nonviral_gene	C5	16657	93071	109728	GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote_CDS_0005	persistent	direct	high	632	0.998	GCA_001402725.1_01219
GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote	cenote	CDS	100148	100807	GCA_001402725.1	LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725.1_LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725_1_8	GCA_001402725_1_8@C5	7078	7737	GCA_001402725_1_8_96	GCA_001402725_1_8_96	-	190413	.	COG5281	Phage-related minor tail protein  [Mobilome: prophages, transposons]. 	MIEVDGLDALGRQAAELEQALGGAEGVAASFNDELGRMRESLTYTGREVGSLSQSFGRSVRRAFDGVIFDGMKLSDALSSVAEGMAQAAYSVAMRPVQEAIGGALASSISGMLGGVFGFAQGGAFSQGRVMPFAKGGVVSSPTTFPMRGATGLMGEAGPEAILPLARGADGRLGVQAGGGRVINVVMNVTTPDAAGFARSQGQIAAQVNRALARGSRNA*	mmseqs_cdd	common_virus	C5	16657	93071	109728	GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote_CDS_0006	persistent	direct	high	659	0.998	GCA_001402725.1_01220
GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote	cenote	CDS	101018	101344	GCA_001402725.1	LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725.1_LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725_1_8	GCA_001402725_1_8@C5	7948	8274	GCA_001402725_1_8_97	GCA_001402725_1_8_97	-	190413	.	pfam11836	Phage tail tube protein, GTA-gp10. This is a family of phage tail tube proteins.	MANPWAGEVEVVLGAERRVAKLTLGALAELEAGLGEASLMDLVRRFESGAFSSRDVLALIVAGLRGGGWEGRAEDLRTVEIGGGPVGAARIAAELLARAFTVPGQGGT*	mmseqs_cdd	nonviral_gene	C5	16657	93071	109728	GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote_CDS_0007	persistent	direct	high	326	0.997	GCA_001402725.1_01222
GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote	cenote	CDS	101352	101765	GCA_001402725.1	LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725.1_LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725_1_8	GCA_001402725_1_8@C5	8282	8695	GCA_001402725_1_8_98	GCA_001402725_1_8_98	-	190413	.	PFAM:PF06199.10	tail-tube-protein	MAAQNGKDLLIKLDLTGSGQFETIAGLRATRISFNAETVDVTSLESQGGWRELLGGAGVRSASISGAGVFKDADTDERARQIFFDGEVPEFQVIIPDFGIVQGPFMITSIDYAGSHNGEASYELALASAGALGFTAI*	hallmark_hmm	common_virus	C5	16657	93071	109728	GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote_CDS_0008	persistent	direct	high	413	0.998	GCA_001402725.1_01223
GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote	cenote	CDS	101825	102232	GCA_001402725.1	LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725.1_LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725_1_8	GCA_001402725_1_8@C5	8755	9162	GCA_001402725_1_8_99	GCA_001402725_1_8_99	-	190413	.	PDB:5A21_G	tail-completion-protein	MSYAVAGALQAAVYQHLRADAVLAALVGTAVYDAVPPGTLVGTYVSLGPEDVADASDKTGEGAVHDFVISVITDAAGFATAKAAAAAVSDALVGADLALARGRLVGLWFLRAKARRVEKADTRRIDLVFRARVEG*	hallmark_hmm	common_virus	C5	16657	93071	109728	GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote_CDS_0009	persistent	direct	high	407	0.998	GCA_001402725.1_01224
GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote	cenote	CDS	102229	102567	GCA_001402725.1	LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725.1_LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725_1_8	GCA_001402725_1_8@C5	9159	9497	GCA_001402725_1_8_100	GCA_001402725_1_8_100	-	190413	.	CDD:pfam05521	Head-Tail-Connector-protein	MSMPRLNRKLVLEEALRVADGAGGHWLDWVAKGVLWAEVTAGSGTERAGEFVTLASVPWTIVVRAAPVGAASRPKPEQRFREGSRIFRILAVAERDREGHYLTCFAREEVVA*	hallmark_hmm	common_virus	C5	16657	93071	109728	GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote_CDS_0010	persistent	direct	high	338	0.997	GCA_001402725.1_01225
GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote	cenote	CDS	102564	103157	GCA_001402725.1	LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725.1_LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725_1_8	GCA_001402725_1_8@C5	9494	10087	GCA_001402725_1_8_101	GCA_001402725_1_8_101	-	190413	.	CDD:cd08054	Head-Tail-Connector-Protein	MMLNEVTAVPSAALPVAEFRDHLRLGTGFADLGAEDAALLSYLRAAIAAIEGRTAKALISRAFRLALTGWRWGDMQTLPIAPVSAVTALRLVDAAGAETPVAAGWRLVPDMARPRIEALGAALPAIPGGGRVEIDFTAGFGASWSALPVDLAQAVFLLAAQYYELRHDGAAEGGAMPFGVMALIERWRTVRVLGGRP*	hallmark_hmm	common_virus	C5	16657	93071	109728	GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote_CDS_0011	persistent	direct	high	593	0.998	GCA_001402725.1_01226
GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote	cenote	CDS	103332	104528	GCA_001402725.1	LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725.1_LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725_1_8	GCA_001402725_1_8@C5	10262	11458	GCA_001402725_1_8_102	GCA_001402725_1_8_102	-	190413	.	CDD:TIGR01554	phage-major-capsid-protein,-HK97-family	MKTETKARAGTGMPEGADPVAEVKTALAGFLREVKGFQDDVKTRLQQQEERVTMLQTKTFAGRHALATAATEEAPHQKAFAAYLRTGDDDGLRGLCLEGKALNSAVAAEGGYLVDPQTSETIRGVLRSTASLRQIASVVNVEATSFDVLVDKTDMGSGWASETAALSETATPQIDRISIPLHELAAMPKASQRLLDDSAFDIETWLANRIADKFARAEAAAFISGDGVDKPTGFLTKAKVANGAWAWGSLGYVATGAAGDFAAVNASDAVVDLVYALGAEYRANASFVMNSKTAGAVRKMKDADGRFLWADSLAAGEPARLMGYPVLIAEDMPDIAANAYAIAFGDFGNGYTIAERPDLRVLRDPFSAKPHVLFYASKRVGGDVSDFAAIKLLKFAAS*	hallmark_hmm	common_virus	C5	16657	93071	109728	GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote_CDS_0012	persistent	direct	high	1196	0.999	GCA_001402725.1_01227
GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote	cenote	CDS	104560	105114	GCA_001402725.1	LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725.1_LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725_1_8	GCA_001402725_1_8@C5	11490	12044	GCA_001402725_1_8_103	GCA_001402725_1_8_103	-	190413	.	PFAM:PF04586.16	prohead-serine-protease	MERGESGLERKFCGAQPVQLQEGARIEGYASLFGLPDQGGDVVAQGAYAKSLAAIAARGGSVKMLWQHDPAQPIGVWDEIREDARGLWVKGRLLPEVARAREALALIAAGAIDGLSIGYRTIAAEKDAKGQRLLAELELWEVSLVTFPMLREARVAAKGETLDAAIWRDLARALSAATAELAAR*	hallmark_hmm	common_virus	C5	16657	93071	109728	GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote_CDS_0013	persistent	direct	high	554	0.998	GCA_001402725.1_01228
GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote	cenote	CDS	105125	105358	GCA_001402725.1	LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725.1_LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725_1_8	GCA_001402725_1_8@C5	12055	12288	GCA_001402725_1_8_104	GCA_001402725_1_8_104	-	190413	.	.	hypothetical protein	MVVGGSRFLKEPFEVHEQRFEATERIMELQFTQVERRLERIEVMIERLEKRLFMTVYGVIAVILTQAVQGILDYAPK*	.	hypothetical_protein	C5	16657	93071	109728	GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote_CDS_0014	persistent	direct	high	233	0.996	GCA_001402725.1_01229
GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote	cenote	CDS	105362	106552	GCA_001402725.1	LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725.1_LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725_1_8	GCA_001402725_1_8@C5	12292	13482	GCA_001402725_1_8_105	GCA_001402725_1_8_105	-	190413	.	PDB:6TE9_A	Portal-Protein	MGLNFFRKAAPEAQVQTAVERKASVTGRIVAMASGAGRPVWGPRDTVSLMRTGFSGNPVGFRSVKLIAEAAAAVPLICQDAERRYEIHPVLDLLRRPNAGQGRAELFEALIGQILLSGNGYLEAVCPEPGVPRELHVLRSDRMAVVPGADGWPVAYDYTVAGRKHRFDMTGHPDPICHIKSFHPTDDHYGLSPMQAAAVAFDVHNAASAWSKALLDNAARPSGAIIYKGADGQGVLAPEQYERLIFEMETHHQGARNAGRPMLLEGGLDWKPMGFSPSDMEFHETKAAAAREIALAFGVPPMLIGIPGDATYANYAEANRAFYRLTVLPLLTRVSAALAWWLSGYLGAQIELKPDLDQVPALAVERDQLWARIGAAGFLSDAEKRVLLGLPPVAEG*	hallmark_hmm	common_virus	C5	16657	93071	109728	GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote_CDS_0015	persistent	direct	high	1190	0.999	GCA_001402725.1_01230
GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote	cenote	CDS	106742	108160	GCA_001402725.1	LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725.1_LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725_1_8	GCA_001402725_1_8@C5	13672	15090	GCA_001402725_1_8_106	GCA_001402725_1_8_106	-	190413	.	CDD:COG5323	Large-Terminase	MLKNFADKLPVSGPDASLTSTQPGLRSGAAWLASATPQEVDAFLGGLGDNALLALPWIFEFWALPHQLPPVGAWKSWVIMGGRGAGKTRAGAEWVRAQVEGAGPADAGPAHRVALVGETFDQVRDVMIFGESGILACSPPDRRPEWEATKRRLVWANGATAQAFSAQEPEALRGPQFDAAWVDELAKWRRAEETWDMLQFALRLGRHPQQVITTTPRNVGVLKAILNNPSTVVTHAPTEANRAYLAESFLAEVQARYAGTRLGRQELEGVLLEDVEGALWTTAQLEGLRLAAPPAMDRVVVALDPAVTGGAGSDECGIVVAGAVTRGPVQDWRGYVLEDASVRGRPTDWARAAIAAMERWGAEKLVAEVNQGGEMVESVLRQIDPLVPFRALRASRGKSARAEPVAALYEQGRVKHCRDGRLGALEDQMCRMTVQGYAGKGSPDRVDALVWALTELILEPAAHWRRPQVRGL*	hallmark_hmm	common_virus	C5	16657	93071	109728	GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote_CDS_0016	persistent	direct	high	1416	0.998	GCA_001402725.1_01231
GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote	cenote	CDS	108555	109727	GCA_001402725.1	LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725.1_LLVV01000008.1	GCA_001402725.1|LLVV01000008.1	GCA_001402725_1_8	GCA_001402725_1_8@C5	15485	16657	GCA_001402725_1_8_107	GCA_001402725_1_8_107	-	190413	.	COG1559	Cell division protein YceG, involved in septum cleavage [Cell cycle control, cell division, chromosome partitioning]. 	MMWRNIVSNFLTLLIVLMVVSGGMVTWAKRQYDGPGPLAAGMCLRVEPGAKFRDVSETLKEKGAISSAYIFRAGADYDQKAGKLKVGSYLIAPGASMAGIVDQITAGGPSSCGTELNYRIGVNGQQMILRELDPALGDYVETAKFDPKREAAPEGFAEDAAQSDVRLRVTLAEGVTSWQVVEALKSADFLTGEVAKLPPEGSLSPDSYEMKRGAKRADLIAEMTERQKAVLAEAWAARAPGLPYKTPEEALVMASLVEKETGVAEERARVASVFVNRLAQGMRLQTDPAVIYGVTKGQGVLGRGLRQSELRRETPYNTYVIDGLPPGPICNPGTQAIRAALNPDSTRFLYFVADGTGGHAFAETITEHNRNVARWREIEKTLKPGASDGN*	mmseqs_cdd	nonviral_gene	C5	16657	93071	109728	GCA_001402725.1|LLVV01000008.1@region_93072_109728@tool_cenote_CDS_0017	persistent	direct	high	1172	0.999	GCA_001402725.1_01232
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	tRNA	32744	32819	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	1254	1329	tRNA-Thr	tRNA-Thr	+	157765	.	tRNAscan-SE score: 86.6	Thr	NA	tRNAscan-SE	.	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	tRNA	70456	70527	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	38966	39037	tRNA-Val	tRNA-Val	-	157765	.	tRNAscan-SE score: 71.5	Val	NA	tRNAscan-SE	.	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_tRNA_0003	.	.	.	.	.	.
GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote	cenote	tRNA	34715	34800	GCA_001402725.1	LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725.1_LLVV01000002.1	GCA_001402725.1|LLVV01000002.1	GCA_001402725_1_2	GCA_001402725_1_2@C1	3225	3310	tRNA-Val	tRNA-Val	-	157765	.	tRNAscan-SE score: 30.4	Val	NA	tRNAscan-SE	.	C1	39455	31491	70946	GCA_001402725.1|LLVV01000002.1@region_31492_70946@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote	cenote	tRNA	28263	28334	GCA_001402725.1	LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725.1_LLVV01000006.1	GCA_001402725.1|LLVV01000006.1	GCA_001402725_1_6	GCA_001402725_1_6@C0	28264	28335	tRNA-Thr	tRNA-Thr	-	95907	.	tRNAscan-SE score: 76.7	Thr	NA	tRNAscan-SE	.	C0	28622	0	28622	GCA_001402725.1|LLVV01000006.1@region_1_28622@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote	cenote	tRNA	128043	128119	GCA_001402725.1	LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725.1_LLVV01000010.1	GCA_001402725.1|LLVV01000010.1	GCA_001402725_1_10	GCA_001402725_1_10@C3	42588	42664	tRNA-Arg	tRNA-Arg	+	134910	.	tRNAscan-SE score: 72.1	Arg	NA	tRNAscan-SE	.	C3	49455	85456	134911	GCA_001402725.1|LLVV01000010.1@region_85457_134911@tool_cenote_tRNA_0001	.	.	.	.	.	.