core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001435015.1|AZET01000019.1@region_1_6000@tool_cenote	cenote	CDS	132	644	GCA_001435015.1	AZET01000019.1	GCA_001435015.1|AZET01000019.1	GCA_001435015.1_AZET01000019.1	GCA_001435015.1|AZET01000019.1	GCA_001435015_1_11	GCA_001435015_1_11	133	645	GCA_001435015_1_11_1	GCA_001435015_1_11_1	+	6000	.	PDB:4BQQ_A	Integrase	MALDKIDELNKDVIVIHPQRVIKDYAVGVYARVSTNRKEQLDSLAVQVSGLTRLAAAHMTWFVADVFLDVASAKVGSSRNEFNWMIDECEKGNLDIILTKSVSRFGRDTKEGLEVIRKIKACGTRIIFEADKIDTETVDDELLISVVQACSQAESDWRSENIVWGLRRRA*	common_virus_hmm	common_virus	NaN	.	0	6000	GCA_001435015.1|AZET01000019.1@region_1_6000@tool_cenote_CDS_0001	cloud	direct	high	512	0.998	GCA_001435015.1_00479
GCA_001435015.1|AZET01000019.1@region_1_6000@tool_cenote	cenote	CDS	705	1103	GCA_001435015.1	AZET01000019.1	GCA_001435015.1|AZET01000019.1	GCA_001435015.1_AZET01000019.1	GCA_001435015.1|AZET01000019.1	GCA_001435015_1_11	GCA_001435015_1_11	706	1104	GCA_001435015_1_11_2	GCA_001435015_1_11_2	+	6000	.	PDB:4BQQ_A	Integrase	MLIIDEEQAKVVRAIFDWYLEGLSVGGIIERLKSKGDNSPKGKDTWSKRAVESTLTRRKYTGDVAIADSGGSDRQYLYSAHHAGIISKEKFEAVELEMAARSNLEVGEDGTVKHKSKKYSSKTSRKENLNEL*	common_virus_hmm	common_virus	NaN	.	0	6000	GCA_001435015.1|AZET01000019.1@region_1_6000@tool_cenote_CDS_0002	cloud	direct	high	398	0.997	GCA_001435015.1_00480
GCA_001435015.1|AZET01000019.1@region_1_6000@tool_cenote	cenote	CDS	1093	1737	GCA_001435015.1	AZET01000019.1	GCA_001435015.1|AZET01000019.1	GCA_001435015.1_AZET01000019.1	GCA_001435015.1|AZET01000019.1	GCA_001435015_1_11	GCA_001435015_1_11	1094	1738	GCA_001435015_1_11_3	GCA_001435015_1_11_3	+	6000	.	.	hypothetical protein	MNCRGHDTRQRIVRDYEIHPEAHIKLLTNQQKHSDAGATIEDEYYVFSAKRKADGKKKVIQCGMGAARYFLELINHKGLPLFNPIIGDPSVNNRKEYDNIGNGNLQSEKWNETAKQLYNAIMWLIILWDAKPDTPLFDFKDEVIKYKTYEPFESKIKRFNTTIKNGGKEKTLTEIINGYRADNDIRDGICNFDILKNKIRDMKDKQGNTIESYF*	.	hypothetical_protein	NaN	.	0	6000	GCA_001435015.1|AZET01000019.1@region_1_6000@tool_cenote_CDS_0003	cloud	direct	high	644	0.998	GCA_001435015.1_00481
GCA_001435015.1|AZET01000019.1@region_1_6000@tool_cenote	cenote	CDS	2393	2716	GCA_001435015.1	AZET01000019.1	GCA_001435015.1|AZET01000019.1	GCA_001435015.1_AZET01000019.1	GCA_001435015.1|AZET01000019.1	GCA_001435015_1_11	GCA_001435015_1_11	2394	2717	GCA_001435015_1_11_4	GCA_001435015_1_11_4	+	6000	.	PDB:6Z6D_A	Large-Terminase	MVQNLENMGFTVVLFGQGFKDMLPPMKELMKLTLEQKIAHGGNPVLRWNMDNIFIKTDSAENIKANKEKSTEKIDGAIATIMALDRAIICGNANTESVYDSRGILLV*	hallmark_hmm	common_virus	NaN	.	0	6000	GCA_001435015.1|AZET01000019.1@region_1_6000@tool_cenote_CDS_0004	cloud	direct	high	323	0.997	GCA_001435015.1_00482
GCA_001435015.1|AZET01000019.1@region_1_6000@tool_cenote	cenote	CDS	2855	3898	GCA_001435015.1	AZET01000019.1	GCA_001435015.1|AZET01000019.1	GCA_001435015.1_AZET01000019.1	GCA_001435015.1|AZET01000019.1	GCA_001435015_1_11	GCA_001435015_1_11	2856	3899	GCA_001435015_1_11_5	GCA_001435015_1_11_5	+	6000	.	COG3177	Fic family protein  [Transcription]. 	MRFFNYENLARSKWDSEIINLLSQIHEHKGKQELFLTRKPAVLDKLVEIAKIQSVEDSNRIEGIVTTAVRIKELMNQKTTPRNRDEEEIIGYRDVLNMIHESYEYIPINSNYILQLHRDLFKYSEKEIGGRYKNTQNSIVEKDKEGNAIERFKPLSPYETPGAIEQICNELNIAFDKKDVDSLLLISIFIHDFLCIHPFSDGNGRMSRLLTTLLLYRQGYVIGKYISLESKIEKNKDSYYIALEKSGIGWHENKENPVPFIKYILRTILAAYIDFEERVDYVDEKVPTIDLVKNAIDSKLGKFTKSDMMELVPSVGKATIENKLKKLTEEGYIERYGKGRATFYVKK*	mmseqs_cdd	nonviral_gene	NaN	.	0	6000	GCA_001435015.1|AZET01000019.1@region_1_6000@tool_cenote_CDS_0005	cloud	direct	high	1043	0.999	GCA_001435015.1_00483
GCA_001435015.1|AZET01000019.1@region_1_6000@tool_cenote	cenote	CDS	3944	4141	GCA_001435015.1	AZET01000019.1	GCA_001435015.1|AZET01000019.1	GCA_001435015.1_AZET01000019.1	GCA_001435015.1|AZET01000019.1	GCA_001435015_1_11	GCA_001435015_1_11	3945	4142	GCA_001435015_1_11_6	GCA_001435015_1_11_6	+	6000	.	PFAM:PF06074.12	Portal	MGSSSSERRVNERSAMQMTAVYSCVRILSEEVASLLLHVYERTEIGTVKTIEHPLYKVLYDESNL*	hallmark_hmm	common_virus	NaN	.	0	6000	GCA_001435015.1|AZET01000019.1@region_1_6000@tool_cenote_CDS_0006	.	unmatched_CDS	none	0	0	.
GCA_001435015.1|AZET01000019.1@region_1_6000@tool_cenote	cenote	CDS	4125	4427	GCA_001435015.1	AZET01000019.1	GCA_001435015.1|AZET01000019.1	GCA_001435015.1_AZET01000019.1	GCA_001435015.1|AZET01000019.1	GCA_001435015_1_11	GCA_001435015_1_11	4126	4428	GCA_001435015_1_11_7	GCA_001435015_1_11_7	+	6000	.	PFAM:PF06074.12	Portal	MNQIFRETMMTHLLLWCNAYVQIIRNGKGEVLGLYPLMPDRMKVDRDDKGQIYYEYFVSDSDEGTEKQGRVKLNELDVLHIPGLGFDGLVGYSPQVAARH*	hallmark_hmm	common_virus	NaN	.	0	6000	GCA_001435015.1|AZET01000019.1@region_1_6000@tool_cenote_CDS_0007	cloud	direct	moderate	278	0.917	GCA_001435015.1_00484
GCA_001435015.1|AZET01000019.1@region_1_6000@tool_cenote	cenote	CDS	4896	5093	GCA_001435015.1	AZET01000019.1	GCA_001435015.1|AZET01000019.1	GCA_001435015.1_AZET01000019.1	GCA_001435015.1|AZET01000019.1	GCA_001435015_1_11	GCA_001435015_1_11	4897	5094	GCA_001435015_1_11_8	GCA_001435015_1_11_8	+	6000	.	PFAM:PF07508.12	DNA-invertase	MVVNAGGKEGQIYKLNNFHPAIISKEMFDAVQEEKHKRSNVVVDDNGIHRNTTKYSSKNKNRILT*	phrogs_hmm	hypothetical_protein	NaN	.	0	6000	GCA_001435015.1|AZET01000019.1@region_1_6000@tool_cenote_CDS_0008	.	unmatched_CDS	none	0	0	.
GCA_001435015.1|AZET01000019.1@region_1_6000@tool_cenote	cenote	CDS	5110	5856	GCA_001435015.1	AZET01000019.1	GCA_001435015.1|AZET01000019.1	GCA_001435015.1_AZET01000019.1	GCA_001435015.1|AZET01000019.1	GCA_001435015_1_11	GCA_001435015_1_11	5111	5857	GCA_001435015_1_11_9	GCA_001435015_1_11_9	+	6000	.	.	hypothetical protein	MSNYAYRDIERKIVLYSSQAIKEDRNETFYCPNPKCKAKLYICAIEGSKSAYFRATKPMYKHILNCPFGTSSSEFDKNKFDESEFVFNNAIDGLLVVTGNPKKEKKIDGHSIGEPRAHPLRTIKQIYSMCKSMPANLKYGDKEIGEMLLDDRSEYRYPRGCFGKKIIEAAVKGKLYDNKKKEIYLVAPMYSQKYSFILSFFDEITYKTIRSEIYNNRDKIIVVAGEWKSSGIYNITRIYGRKQVAIGK*	.	hypothetical_protein	NaN	.	0	6000	GCA_001435015.1|AZET01000019.1@region_1_6000@tool_cenote_CDS_0009	cloud	direct	high	746	0.999	GCA_001435015.1_00485
GCA_001435015.1|AZET01000023.1@region_1_4726@tool_cenote	cenote	CDS	2	574	GCA_001435015.1	AZET01000023.1	GCA_001435015.1|AZET01000023.1	GCA_001435015.1_AZET01000023.1	GCA_001435015.1|AZET01000023.1	GCA_001435015_1_16	GCA_001435015_1_16	3	575	GCA_001435015_1_16_1	GCA_001435015_1_16_1	-	4726	.	PFAM:PF06152.10	minor-capsid-protein	MKKKTNRYWEDRAEDERKWQLEQFRVDEKFNKTLDRSYQIAVDNINKQIEHELARIGGIQKLVTPEQMSEYERMAQQVVARANNLRAAGHKVSYKDFPQAVNDRLKAYNATMRISQLELMKSEVGLPLINLGMDLECSIGDKVYSDYLKEKKRQAGIISKTLVNNEKWASRKTVDSATANVTVGDFSKNVW	hallmark_hmm	common_virus	NaN	.	0	4726	GCA_001435015.1|AZET01000023.1@region_1_4726@tool_cenote_CDS_0001	cloud	ambiguous	low	16	0.028	GCA_001435015.1_00817
GCA_001435015.1|AZET01000023.1@region_1_4726@tool_cenote	cenote	CDS	558	1979	GCA_001435015.1	AZET01000023.1	GCA_001435015.1|AZET01000023.1	GCA_001435015.1_AZET01000023.1	GCA_001435015.1|AZET01000023.1	GCA_001435015_1_16	GCA_001435015_1_16	559	1980	GCA_001435015_1_16_2	GCA_001435015_1_16_2	-	4726	.	PDB:5A20_A	Portal-Protein	MRKLDTGQDKVTKNDTFIFPRGNKLNGNELIAFIGYNETVLNKRYITNMNYYLGKHAILSENSFKSDNIDNRIVDNKIKPLVDSYNGFFIGIPPTITATDDSVNEEVQTWNNENLIQDQLNEISKQTDIYGRSIAFIYQGEDSKPHLKYSSPSHAFIIYDDTVERRPLAFVRYELEDGETYTEAYGQIQYADKIYKFKGSEISDDTDTNEYAANPYGIVPAVEFYENEERQGIFEQIIYLQDELDHAMSQKANQIAYFDNAYMYMFGINLSEDEDGNPEFNFKKNRLIYSPNIDPSTKPEIGFISKPDADGMQENMIDHLQKSIYENTGIANLRDENFAGNSSGIAMQYKLLSMKDKADSKERKFTQSLKKIYQIVFATLFNDKTKQQAWSNLKFHFTRNLPDDIAALISSAKNAEGLVSHQTQLSLLPFIKDPQAELDQISKEKAEAIKQAQQSMQSVPDYLLEDKPDEKED*	hallmark_hmm	common_virus	NaN	.	0	4726	GCA_001435015.1|AZET01000023.1@region_1_4726@tool_cenote_CDS_0002	cloud	direct	high	1421	0.999	GCA_001435015.1_00817
GCA_001435015.1|AZET01000023.1@region_1_4726@tool_cenote	cenote	CDS	1992	3221	GCA_001435015.1	AZET01000023.1	GCA_001435015.1|AZET01000023.1	GCA_001435015.1_AZET01000023.1	GCA_001435015.1|AZET01000023.1	GCA_001435015_1_16	GCA_001435015_1_16	1993	3222	GCA_001435015_1_16_3	GCA_001435015_1_16_3	-	4726	.	PDB:5OEA_B	Large-Terminase	MIAVALQDLLTKKQIKVLHSYLADDWKILINAGAVRSGKTYINNYLFLLELRRIAKLAMENNDEHPQYIIAGFSSNSIFNNIINSIGSQFGIMLTADRHGHYHLFGVNIVPAYTGSLRGIGGIRGMTSYGAYINEASLSTHAVFQEIKQRCSKEGARIICDTNPDIPTHWLKTEYIDNVDSNAGIKYFMFTIDDNPTLPKDYVVSLKASTPKGMFYDRAIKGLWVTGDGIVYRDFDKETMIVDKVPQNLNYYVGVDWGFEHKNAILVFGDDDKGNTYLVESHTGKHQYIDYWIKVAKDIQKRYGRNINYWCDSARPEHVSAFQKAGLKARNANKSILAGIEKVSELMTLGNFFILHSASKDILDELYQYVWNEQTGEPIKEHDDDMDAMRYAIYSQHIKKEAKVIKSFI*	hallmark_hmm	common_virus	NaN	.	0	4726	GCA_001435015.1|AZET01000023.1@region_1_4726@tool_cenote_CDS_0003	cloud	direct	high	1221	0.993	GCA_001435015.1_00818
GCA_001435015.1|AZET01000023.1@region_1_4726@tool_cenote	cenote	CDS	3175	3726	GCA_001435015.1	AZET01000023.1	GCA_001435015.1|AZET01000023.1	GCA_001435015.1_AZET01000023.1	GCA_001435015.1|AZET01000023.1	GCA_001435015_1_16	GCA_001435015_1_16	3176	3727	GCA_001435015_1_16_4	GCA_001435015_1_16_4	-	4726	.	PFAM:PF07141.10	Small-Terminase	MNIVSLAFYFILKVVMLLVMGRALYKEWLDKDKLVLLQGWKRAGLTDVQISQNMGVSVFTLDKWKRNYSQIRQALKRGRSEINYIVENALLKKALEGNITAMIFFLKNNWRDKYNDSQLSKEERELVLANIQKTKAEARIKEAKAIIAERLGDESNAKLEELLNKIVQGDSSGTTRFTDKETN*	hallmark_hmm	common_virus	NaN	.	0	4726	GCA_001435015.1|AZET01000023.1@region_1_4726@tool_cenote_CDS_0004	cloud	direct	moderate	495	0.897	GCA_001435015.1_00819
GCA_001435015.1|AZET01000023.1@region_1_4726@tool_cenote	cenote	CDS	3741	4136	GCA_001435015.1	AZET01000023.1	GCA_001435015.1|AZET01000023.1	GCA_001435015.1_AZET01000023.1	GCA_001435015.1|AZET01000023.1	GCA_001435015_1_16	GCA_001435015_1_16	3742	4137	GCA_001435015_1_16_5	GCA_001435015_1_16_5	-	4726	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MSNNLLIYPIIVTECHDEAGHYYGAISPNIPGMVTDGQTLQELVIHAEDAIATMISGTKYPEVQDLKEWTLGPNDFVVYVTVNMLKWEAQHEKTVRRNITLPEGLNNWAKDNKINVSKVTTEALRSMQNTN*	mmseqs_cdd	nonviral_gene	NaN	.	0	4726	GCA_001435015.1|AZET01000023.1@region_1_4726@tool_cenote_CDS_0005	shell	direct	moderate	384	0.97	GCA_001435015.1_00820
GCA_001435015.1|AZET01000023.1@region_1_4726@tool_cenote	cenote	CDS	4186	4374	GCA_001435015.1	AZET01000023.1	GCA_001435015.1|AZET01000023.1	GCA_001435015.1_AZET01000023.1	GCA_001435015.1|AZET01000023.1	GCA_001435015_1_16	GCA_001435015_1_16	4187	4375	GCA_001435015_1_16_6	GCA_001435015_1_16_6	-	4726	.	COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family [General function prediction only]. 	MPIKPSKMVRLLLKAGFKEVPKGGGHRRFRHPDGRMTEVPMHGKELTPYTQRKILEQAKIKL*	mmseqs_cdd	nonviral_gene	NaN	.	0	4726	GCA_001435015.1|AZET01000023.1@region_1_4726@tool_cenote_CDS_0006	shell	direct	high	188	0.995	GCA_001435015.1_00821