core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	29555	29671	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	1	117	GCA_001500315_1_4_30	GCA_001500315_1_4_30	+	53687	.	.	hypothetical protein	MIVLVFIHENAGVILMEELDVSCCKYTLDSFNNGDILK*	.	hypothetical_protein	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	30197	30541	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	643	987	GCA_001500315_1_4_31	GCA_001500315_1_4_31	+	53687	.	PFAM:PF00565.16	nuclease	MAENKKDDQKWYQTTWFTILCLILFFPLGLVLMWMYKKNWKTWVKVLVTVFFSISFIGGAFMGQSDLDETQAEDSTEQAQKNEQSDNDKQQENDNKDKEEAKDNKDKEKQQEKK*	phrogs_hmm	hypothetical_protein	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0002	shell	direct	high	344	0.997	GCA_001500315.1_00521
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	30654	31016	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	1100	1462	GCA_001500315_1_4_32	GCA_001500315_1_4_32	+	53687	.	.	hypothetical protein	MRGDLKSVRNENDEGNVVIVIDGAEGITDKETVKGFREATSQAVYGAKKSGVDINNLDINIFYTMTDGINKDDEKVLSTSWDKETIESMNEDAIFTLADTLENHAEDFYMHPGIAKHDEN*	.	hypothetical_protein	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0003	shell	direct	high	362	0.997	GCA_001500315.1_00522
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	31331	32029	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	1777	2475	GCA_001500315_1_4_33	GCA_001500315_1_4_33	+	53687	.	PFAM:PF16339.4	lipoprotein	MKKLLFLTLSGILVLSACGNNEDTTSEDNESKAENKQHDEKEKTTEDKDKENKKEDKKDKDESEEKENNKDENSEEESNQESTENDNVQNNQQDVANQNGYQDLDFNSIQDVGRLKSIIYGDYTEEQKLEAYNTAVSNGVIPQGNVMEGPASEAFESSMRIANGEEESIYDGLGEEDEDEIEKEREEREDELQDEYFEISDKLFEDDNLSEEEEEELEKRQDEILDEVEPIH*	phrogs_hmm	hypothetical_protein	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0004	shell	direct	high	698	0.999	GCA_001500315.1_00523
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	33498	33731	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	3944	4177	GCA_001500315_1_4_34	GCA_001500315_1_4_34	+	53687	.	.	hypothetical protein	MGIPKGTPLYADYVIQHNQLPKLVSLILNLTLKIEYDYVDTSIPHLYGGCFLYKKETADFRSCPLIKVWFIFMIHKR*	.	hypothetical_protein	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0005	.	unmatched_CDS	none	0	0	.
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	34486	35232	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	4932	5678	GCA_001500315_1_4_35	GCA_001500315_1_4_35	-	53687	.	PRK05565	3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	MEQLNDKVAIVTGGSSGIGEATVRLFAKEGAKVVIADVSESGKELSEELSKEGHKTFFVKTDVTQEEDVINLIDQTVDKFGKLDIMYANAGIAADNPAADLSYDDWKKTIDVNLSGVFLSDKYAVKQFKKQDSKGVIVNAGSIHSFVSLPQTTAYASAKGGVKLLTQNLCTAYAKDGIRVNAVCPGYVATNLLKDVDEDKRKTLEGLHPQGRLGKPEEVAKAVLFLASDDSTFVNGTTLLVDGGYTAQ*	mmseqs_cdd	nonviral_gene	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0006	persistent	direct	high	746	0.999	GCA_001500315.1_00524
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	35410	36843	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	5856	7289	GCA_001500315_1_4_36	GCA_001500315_1_4_36	-	53687	.	PDB:4OLS_C	Endolysin	MPAKLTKEEAKEFIKTLNGKMWDYDGAYGAQCFDLANVYWDKLFGHGLKGQGAKDIPNANNFKGEAHVYNNTASFKAKNGDLVVFNSNYGGGYGHVAIVVNGNSDGNLMQFKSLDQNWYGGGESMTEPAQYIVHNYDFPMWFIRPIFKKESETKKSTQSATKTTEKKKEAPKKKPIKLKYIEDEVTGYKLDKRGSKPKGVVLHNDAGSAGATADAYHKGLVNASQERLEQGIAHSYISGNTVWQALPEERIAWHTANSNGNKNYYGIEICQSIGASDKTFLKNEQAAFQEAARLLKKWGLKANRNTVRLHVEFTNTSCPHRSALLHTGHDPEKQGMLSKQQQKKLKDYFIKQIRAFMDGKVPTAKVVKGKSSSNTSSTIAGAWKRNNYGTYYMKEKARFTNGDQPIMVRTQGPFRSCPYAYDFTPGGYCDYDEVMLQDGHVWVGYNHNNKRYYLPIRTWDGVAPPNQGVGYLWGQIN*	common_virus_hmm	common_virus	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0007	shell	direct	high	1433	0.999	GCA_001500315.1_00525
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	36824	37312	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	7270	7758	GCA_001500315_1_4_37	GCA_001500315_1_4_37	-	53687	.	PFAM:PF04531.12	Bacteriophage-holin	MNWKLRFKNKPTLVAIVGACLLLVKQVTELFGLDLSAQLEQIADILGTIILLLVTVGIINDPTTEGVNDTELVKQYNKPRKQGLMPVDFVKPPQKEDENVAPEAKAKEIEDFDTNQPFTDDSDEVDFDVADDEADETLKRGASAYHDDQILKEDDENASETN*	common_virus_hmm	common_virus	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0008	shell	direct	high	488	0.998	GCA_001500315.1_00527
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	37361	37759	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	7807	8205	GCA_001500315_1_4_38	GCA_001500315_1_4_38	-	53687	.	.	hypothetical protein	MPEDKYVLKHEWQESNGKINEKMNQIDNKHTKNYTDLLNRIDKQTILQEKSFESQSKSEQHLEKISTSLSDMGYRVRDLEHDSDTNKKNIQMIQNKIEDEAKGNRDVIVAWISVVGVVLVPIITLVANVFFE*	.	hypothetical_protein	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0009	shell	direct	high	398	0.997	GCA_001500315.1_00528
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	37746	38174	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	8192	8620	GCA_001500315_1_4_39	GCA_001500315_1_4_39	-	53687	.	.	hypothetical protein	MTKHKNILVPQKIATLSLLALGAFITIRGFYFAVNQEDVIHESEFYTTLYRVMPMWIWGALLIVFGFLIILASCFFGKRSTNNISNYCMLIGGAGGAIIYFFIASASIYNTINWISPAQFITTTAWLCFISFLGGSDIYARR*	.	hypothetical_protein	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0010	shell	direct	high	428	0.998	GCA_001500315.1_00529
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	38171	38791	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	8617	9237	GCA_001500315_1_4_40	GCA_001500315_1_4_40	-	53687	.	COG4195	Phage-related replication protein YjqB, UPF0714/DUF867 family [Mobilome: prophages, transposons]. 	MADVYHSMSELIRKEKDYKFEYYDQGSHNLITAIHGGGIESGTSELAQCIAEKSRSNYFSFKAMKKENNYDFHVTSTHYDYPTLIQWSQKMKQVIAIHGVKGNDVITYVGGRDKEMRNAIIELLNGNGFKAEKAPKRLAGTNPNNITNKNARGQGVQLELSTQQRKMLFKNNDFSRSVREKEINWSDDMYLYADSICRAIKRGESS*	mmseqs_cdd	nonviral_gene	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0011	shell	direct	high	620	0.998	GCA_001500315.1_00530
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	38805	40013	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	9251	10459	GCA_001500315_1_4_41	GCA_001500315_1_4_41	-	53687	.	PDB:4DIV_C	Distal-Tail-protein	MELKKIGKIDIKDEPYLKPISDLDIGFYNLDNHTAVLRFYITKDNHPLLVSDKNANTYVYLESKNGSNQIVEDIAYINPMKGLVEITIPIEFLQASTGTSVTGQIYISVNNVDNPSDADTVVLNEFTFDVADSKINKINGATKISYIRMFDELRKHIGEREKDIQEKLDNMEDYITKVEAKTAEGVKEIDTKYKNAYASLSKLGQRNENEINEALNAALSTLNNTANDNYRKVRDIGTKHLRDIRAEKTNIENLLNSKGFVRHETLVALSTDLKQSVNELIPEVSDWITYDLNDDANKDKHYKAKGQNGFNCAYKTIKSRDYKMVSVRVNADTFESGDAIAKLPENIVTHTHTAFIRAVPQKAYGAQVVLEPTGELKVWISNPGEWEVDASHYIYGETCFIE*	hallmark_hmm	common_virus	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0012	shell	direct	high	1208	0.999	GCA_001500315.1_00531
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	40025	41245	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	10471	11691	GCA_001500315_1_4_42	GCA_001500315_1_4_42	-	53687	.	CDD:cd03872	Peptidase-M14	MCHITNMLVNEWEKHPQLAYMRKNVRLIWVPMVNPWGFANQERENVNNCDLNRNFDYNWDKSGGTDPAEKNYKGKAPFSEAESQNMRQLVQSISGLTAHIDLHDIISVKADYCLFYPRWAKQSTNRMAQLINKLKNEGDLVVWGSSTLGSLSNWVGVKNNVTSYLSELNEGRVGDKKSPAEMRRSVRWIGNLVFELCQLDSEQNGQTSNDPFIKAMIYDDKFNDKTSEVITLREDRNEWQRIMMSQQRFRVTANGFVELYGYITINVDRDVTVGINPNIIQNYHPFFSKTKTKERNLYSIEHVMNKGNTTVPIYAIAGVQMSSITEEGSNRVDEVMPMLDLLKKGEGVVKLKQVKLFVKFTPSNNAGAVQILKSGEHGNLKEDTFTQIYPNDLNYSDIRNTINPNQ*	common_virus_hmm	common_virus	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0013	shell	direct	high	1220	0.999	GCA_001500315.1_00532
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	41701	42084	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	12147	12530	GCA_001500315_1_4_43	GCA_001500315_1_4_43	+	53687	.	.	hypothetical protein	MIHSYVDNQLVSLDVHAIQLLYVFDVDVLNYHNIIKHFNFLNYFIMDYFFIVSYHLINIINIYECLYMGYRKEITLILSSKYLSITSLLIYNHDPHIFRKIIEKYSVSWSRLRSDRISIISWISASQ*	.	hypothetical_protein	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0014	.	unmatched_CDS	none	0	0	.
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	43486	44232	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	13932	14678	GCA_001500315_1_4_44	GCA_001500315_1_4_44	-	53687	.	PFAM:PF01610.16	Transposase	MNNHILKLLKIKDENIRGTDVEENVEIRRVKSTVIHGILTYEPSGCPLYLKAKHNQIHKHGKRASRITYLKFQEVGIYLKLLKQRFKCMCCLKTFTAKTSVVDDNCYISNQVRHAIMDKSTQIRSDLDIANDCNVSTATVKRQINKISAEFRVNPSTQLPTHLAMDEFKSVKNVASSMSFIFINNETHEIIDILDDRTIHNLKRYFFKFDRQSRLAVKTVTIDMYEPYINLIKVIFPNAKIIFDRFHI*	common_virus_hmm	common_virus	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0015	shell	direct	high	746	0.999	GCA_001500315.1_00533
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	44407	45048	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	14853	15494	GCA_001500315_1_4_45	GCA_001500315_1_4_45	-	53687	.	NF033845	MSCRAMM family adhesin clumping factor ClfB. Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.	MRRKQSKRLDFLPNAQNKYSIRKFAVGTASILVGATLVFGSGHEAQAAEEESDSSTQETSTNEEVQISGGFQTIGEAWDPSLAPETGDAAEGEGEAWDPSLAPETGDAAEGEGEAWDPSLAPETGDAAEGEGEAWDPSLAPETGENGDSQQGISNKEMTTNAKSSAQDGTQAKVLPDTGQDEAIFGTTVSGTLALGLAAVLFGSRSRNKNKQG*	mmseqs_cdd	nonviral_gene	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0016	cloud	direct	high	641	0.998	GCA_001500315.1_00535
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	45912	46349	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	16358	16795	GCA_001500315_1_4_46	GCA_001500315_1_4_46	-	53687	.	PFAM:PF07888.10	tail-length-tape-measure-protein	MAEQYDGVTIKLGLNTANIDRGMQALSRKMKTLNSEIKSHLSAFDMAEKSSDKYNGKIKILNKQLETQGQKVASAENKLKSLKGEQTKANEKIAESSQKLEKTKTTCDKIYDEDNDKQIDLIIFGVLIASLDLLLFRRYNKKEEK*	phrogs_hmm	hypothetical_protein	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0017	shell	direct	high	437	0.998	GCA_001500315.1_00536
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	46367	46522	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	16813	16968	GCA_001500315_1_4_47	GCA_001500315_1_4_47	-	53687	.	.	hypothetical protein	MGYKDHEIQQADFYEMIRIIMQTGDKQSKTTRVKKNESLIGAITGKDPRKK*	.	hypothetical_protein	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0018	.	unmatched_CDS	none	0	0	.
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	46606	46911	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	17052	17357	GCA_001500315_1_4_48	GCA_001500315_1_4_48	-	53687	.	.	hypothetical protein	MAKKYIELRTEDGKKKRYNAPTFIKGSVAREGLALGKKLEKQEKDFDPDIMLELYQFIADKLYEGKFSAEEFEDGIDAREILGVAMEQLTQSLGDPQENLK*	.	hypothetical_protein	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0019	shell	direct	high	305	0.997	GCA_001500315.1_00537
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	47000	47857	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	17446	18303	GCA_001500315_1_4_49	GCA_001500315_1_4_49	-	53687	.	PFAM:PF06488.10	tail-tube-protein	MGKYNSSTGLERFYYGVLDSNEKVKNVKVVDYLKEISLEFDEDLEKAYGSNKVAEIAKSNGETSLSATFHRLPIEAQQDLLGLVQHKSSDGVYGFSNATGINYTACVFARTMEDGSKEWFGLGKGVFTRPAKEGQTKEDGVEFGEDEIEGQFMETDLGGFDDQLAVIMAYDEKGQTQGRDTVFQSVFGKSYSEVTEDLTKVEDNSEASQGGNEDSEDKLKDILENMNRDEISEAVFGKPYDEVLKQLSPNSEASAENSEATPSEAVTESPSGEAASEIYPNTSEQ*	common_virus_hmm	common_virus	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0020	shell	direct	high	857	0.999	GCA_001500315.1_00538
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	47899	48315	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	18345	18761	GCA_001500315_1_4_50	GCA_001500315_1_4_50	-	53687	.	PFAM:PF05657.10	tail-component	MIDMISIIHSYLIRNDAIDKHCRGRIKFYDYPETAEADAPHILISPIGSPMPGEFGSNKELTTNYVFQIDVRGRDRKLVAFLQDEIKKVMWSIGFYTIGGTDQYDSELDKFLNGRRYEGEPYTNEEVKHIDTDIAHIE*	hallmark_hmm	common_virus	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0021	shell	direct	high	416	0.998	GCA_001500315.1_00539
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	48312	48707	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	18758	19153	GCA_001500315_1_4_51	GCA_001500315_1_4_51	-	53687	.	PFAM:PF04883.11	tail-component	MSIKIEGTHELIKKLEKKYGTSQVDKVTNTSLEKGAEYYEGQIKKNFETFKDTGASIKEVTHTEPHFITGNVKQVLIHWKGSMNRYAIIHLNEWGTVKNPNPRGKGMLLKTERESRKPYLNIVREELRKHL*	hallmark_hmm	common_virus	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0022	shell	direct	high	395	0.997	GCA_001500315.1_00540
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	48704	49048	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	19150	19494	GCA_001500315_1_4_52	GCA_001500315_1_4_52	-	53687	.	PDB:2KZ4_A	Head-tail-adaptor	MNKNKWITGGDMRTPVIFYVAKPYDGPEPGEKIEEVYYKCFADVHPPSVKDLDMTDHEASITLETYFPLGYDITDDMYFEIDLPNYKNQHFNIRNIESDINHMKTVKLIGVHKS*	hallmark_hmm	common_virus	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0023	shell	direct	high	344	0.997	GCA_001500315.1_00541
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	49041	49325	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	19487	19771	GCA_001500315_1_4_53	GCA_001500315_1_4_53	-	53687	.	CDD:cd08054	Head-Tail-Connector-Protein	MHLVDDELVEQFKDRNRIFYDIENERIKNDLELSYQDIQGKCGVFDLNDEPVGRELVLERTRYVLNDQLEHFHDNFLSMILQFQFDNMDVTFDE*	hallmark_hmm	common_virus	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0024	shell	direct	high	284	0.996	GCA_001500315.1_00542
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	49328	49510	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	19774	19956	GCA_001500315_1_4_54	GCA_001500315_1_4_54	-	53687	.	.	hypothetical protein	MAKFKVLNRFKDLEQNKIHEKDDTIDITVKRAIDITVKRANEIKDKLKSYDRPFLERIPK*	.	hypothetical_protein	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0025	shell	direct	high	182	0.995	GCA_001500315.1_00543
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	49527	50816	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	19973	21262	GCA_001500315_1_4_55	GCA_001500315_1_4_55	-	53687	.	PFAM:PF06673.10	Major-Capsid-protein	MINFNENEKFKNSQEIFKEFAKMDKHNTDQEIQDKYAEYMNAYTDDLTNAIRSDIQTENSDHAVLNARGMHTLTNEEKKFYNKLVSDEDVNTDVHWKDEYLLPETIVDRIFEDLEEDHPILQYINVQRTGLKTRVIRSNPEGQVVWGKIFGEIRGQLDATFYEQDISLGKATAFVVVPKDLADAGVQWVDRYVRTQIKEAFAVAIEKTAILGKGKAKDEPVGLMKEIDRTTGAVKDKESVGTITLKTPETAIKELNVVIANLSLKEIYDKNGEVKKRKNVNVLNNVVIGLNPADYVYILGAFMQVNNGQFVSPVPFNIIFVTSEFIPKGKAVAFDKQRYLMGVGSESIVRKFDQTLALEDCDVYTAKQFIYGEPEDHYTSIVLDVDFTSHGAPVNEDSQEQKDPSEVADNLDSLNETLNGDQTNDTPEA*	hallmark_hmm	common_virus	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0026	shell	direct	high	1289	0.999	GCA_001500315.1_00544
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	50829	51605	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	21275	22051	GCA_001500315_1_4_56	GCA_001500315_1_4_56	-	53687	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MEDNVIDIYGYIDSVSMDDNIVSPQHISKQLKKMQDAGNITVNINSNGGDVFSGIAIYNMLKKHPAHITVNIDGIAASIASVIAMAGDQINMPGNAVMMIHNAWSVMEGDSKKMKKQAENLERINDLIFNSYLSRKLEMDKKELQSMMDEETWMTAREAKKYGFIDKVIADSKAAATINGIFWGGEMMRKYRNFRNEEEEPETDREPTAEDVVEMLQEILDTVKDIKDKVDGEEDNEEEEKDEEGAQNSFARLFNSMK*	common_virus_hmm	common_virus	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0027	shell	direct	high	776	0.999	GCA_001500315.1_00545
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	51937	52407	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	22383	22853	GCA_001500315_1_4_57	GCA_001500315_1_4_57	+	53687	.	PDB:1Z19_B	Integrase	MQIVKRNNTWAYDMRIDDKRFRKTGFKTKKEAQAAANEKYIEILKSEEKKSAIAFSKYMYDWIEIYKKDYVSQQTYRHYIRIYEKVNAYFGEKEINKITREEYQKFLTRYIDTLSQDQLGRVHSLCNKVVEHAVYDGFLRKSFYFRCTSCIQKATL*	common_virus_hmm	common_virus	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0028	shell	direct	high	470	0.998	GCA_001500315.1_00546
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	CDS	52511	52984	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	22957	23430	GCA_001500315_1_4_58	GCA_001500315_1_4_58	+	53687	.	PDB:1Z19_B	Integrase	MMIETGGRFSDCINLTKKDINKQKGELFLNGTKNDSAPRHVAVTDKLINILLNYANNRPIPISGYLFTHNGEQITNTTVNKAVKQACKHLNIDRNITSHAFRHTHASYLIHEGINIYYISKRLGHSDISVTLNKYGHLLKESLEEENHRTIEKMENL*	common_virus_hmm	common_virus	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_CDS_0029	shell	direct	moderate	389	0.821	GCA_001500315.1_00547
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	tRNA	53562	53636	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	24008	24082	tRNA-Cys	tRNA-Cys	-	53687	.	tRNAscan-SE score: 69.9	Cys	NA	tRNAscan-SE	.	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote	cenote	tRNA	53181	53264	GCA_001500315.1	LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315.1_LLER01000012.1	GCA_001500315.1|LLER01000012.1	GCA_001500315_1_4	GCA_001500315_1_4@C3	23627	23710	tRNA-Leu	tRNA-Leu	-	53687	.	tRNAscan-SE score: 49.8	Leu	NA	tRNAscan-SE	.	C3	24133	29555	53688	GCA_001500315.1|LLER01000012.1@region_29556_53688@tool_cenote_tRNA_0001	.	.	.	.	.	.