core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	234921	235841	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	1	921	GCA_001544235_1_1_221	GCA_001544235_1_1_221	-	471518	.	COG0130	tRNA U55 pseudouridine synthase TruB, may also work on U342 of tmRNA [Translation, ribosomal structure and biogenesis]. 	MDGILPLWKERGMTSHDCVFKLRKILHTKKIGHGGTLDPDVEGVLPICVGKGTKVIEYMVDSGKTYEGEITLGFATTTEDVSGEIVEKKPVTAPLSTEQIDQAMAEMTGEITQIPPMFSAVKVNGKRLYEYARNGEEVERPQRKAMIYSFERTSEPIFNESAQTQSWRFKVVCGKGTYVRTLSVDTGKKLGYPAHMSDLTRTASGGLQAAQCLTLEEVAKQMAAETIDQCLLPIETAVEQFPRIDLSDELYQKVKNGMRLHKKELGIKAMPESLVALFYQNQVVSLYMPHPTHDKLLKPSKVLRNN*	mmseqs_cdd	nonviral_gene	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0001	persistent	direct	high	920	0.999	GCA_001544235.1_00227
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	235995	237092	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	1075	2172	GCA_001544235_1_1_222	GCA_001544235_1_1_222	-	471518	.	PDB:4WLI_A	lytic-transglycosylase	MFKKLMIQLALVIGLSLTIPMTACAYTIEADPINFTYFPGSATNELIVLHESGNERNLGPHSLDNEVAYMKRNWSNAYVSYFVGSGGRVKQLAPAGQIQYGAGSLANQKAYAQIELARTNNATTFKKDYAAYVNLARDLAQNIGADFSLDDGTGYGIVTHDWITKNWWGDHTDPYGYLARWGISKAQLAQDLQTGVSETGETVIIQPGKPNAPKYQVGQAIRFTSIYPTPDALINEHLSAEALWTQVGTITAKLPDRQNLYRIENSGHLLGYVNDGDIAELWRPQTKKSFLIGVDEGIVLRAGQPSLSAPIYGIWPKNTRFYYDAFYIADGYVFIGGTDTSGARIYLPIGPNDGNAQNTWGSFTS*	common_virus_hmm	common_virus	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0002	persistent	direct	high	1097	0.999	GCA_001544235.1_00228
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	237238	237633	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	2318	2713	GCA_001544235_1_1_223	GCA_001544235_1_1_223	-	471518	.	PFAM:PF05105.11	Bacteriophage-holin	MERYLNTITMLLSIFGGIVVRLLGGLDQLLDVFLFLIIVDFITGWIKAIATKELSSRIGMLGIAKKVTMLFVVAVAVRVEKVVGNNLPIREMVLIFYIANEGLSFFENIATFIPMPKKLKELFIQLKNKDD*	common_virus_hmm	common_virus	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0003	persistent	direct	high	395	0.997	GCA_001544235.1_00229
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	237657	239426	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	2737	4506	GCA_001544235_1_1_224	GCA_001544235_1_1_224	-	471518	.	PDB:5EFV_A	Minor-structural-protein	MSVEHIEELDTLNQGRLKINAILDQSNASAEKVDAYQVQLTNGISEAKNIADEAGKEAVQIATDAGNQANETANQAMNNAKTAITIAGNAVSTANNNKQEFDTLRNDFDQLVAEAGDSNPEIVQARTDTQGIKQATLANRLQIDLNNRMTKADGISLLAKPTTVKLKLDFNGKTAGNTATNANSYSTDFTAKILKKPTDVWEEVSQADYNKMASRDDEGVKTGSTQSGVIPQQLAAFNLVEAAKKLIPQMFETFTTDEAVAFIRQNVQFFTINQRVKAAAPNNQTIKIAAYLPTTDNWVTQIQESAKEFGDFSIQINDQNFITDEGFIYLMSYTDSSNGVTPASLEVDYMGLHIGLSVDAQAVLAKSGFVQAEQLNTHVENQDNPHQVTAEQVGLGNVENYGFASDSEAVAGTLTSKYMHPKNVAEAIKGQAVTQTGDQEIAGVKNFVTMPTVNGLPLESSRMAIYEASGVGEVEAKYQAAFNKDNMKFVLIRVGNRVDAFVRCNLSDPTKLNTHMPKIFNIPTGYKMSSKISASVWNIPLSVAPAAFPYPNCNALYEIGNQGIIFASSRAGNIYLQGSWYTDDPFPTK*	hallmark_hmm	common_virus	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0004	persistent	direct	high	1769	0.999	GCA_001544235.1_00230
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	239459	240916	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	4539	5996	GCA_001544235_1_1_225	GCA_001544235_1_1_225	-	471518	.	PDB:3GS9_A	tail-protein	MLMALDLKRTYTAILDNAYQVSYEKIENKIGSLDFTMPLDDPKNEFIAEMQWVELTDNENEYIGLYRVMPTTIKKDANNNQIHYSATEALCTLGDTVLFGCHEIKNKTTKEAIQFLLNKQKTKHWVLKKCDFSRKLTYKWENENGLVEPLFSIPADFEEEYLWQWNTEVYPFELSLVKPPTEPVARIQEGYNMQGFEIERNPKMLINRIYPLGSGEGVNKVNIRSVNQGVPYLENKAAIDRYGLLESIWVEQRFSDPKALKENALRMLEEWTKPQVSWVVTAADLIKLTDQPLAIDRLRLGTVIMINTNEFGSVNLRIKKESKKDVFGAPQDIQLELGNLQETIHSTMTAFSRKQEISETYAQGATTLLNRSIQGELNKTQPVELNLYFDEDILYVNTAELTFKATAKGPSHSVTNIDLVVDGKKLPQLSLQQQRLNILSYLRKTTDGKIERGNHTLQFFSHQPLWLDASVICRVYIQSQLGGQF*	hallmark_hmm	common_virus	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0005	persistent	direct	high	1457	0.999	GCA_001544235.1_00231
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	240929	241855	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	6009	6935	GCA_001544235_1_1_226	GCA_001544235_1_1_226	-	471518	.	PDB:4DIV_S	Receptor-binding-protein	MYKFVDTNQATHSTPLPSEALNFNGQFLEKVIPGYQTLSVSGRELVPSEIESYQLGIRDGKRHVYARIPERELTVKYRLSAVNNEAFRDAFNHLNVALFTEKDVSIWFNDEPEMLWFGSKSSVSDVPEGVNQVTGTFTLLLSDPYKYTRSDATSVMWGSPTITFQANYLMGNTGSGAVDFPILIEGGAYWGSTMITFQNRAYTMGDLGKEVRPIEIYPTVEGLKVKPIIILTGTGRGVWIKTRNDTINLGDFDRSEIIIDTENFYLTKNGASMIRPMNDFYLYPNEPLYIQAKDSDFRLTIRYPNRFV*	hallmark_hmm	common_virus	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0006	persistent	direct	high	926	0.999	GCA_001544235.1_00232
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	241857	244790	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	6937	9870	GCA_001544235_1_1_227	GCA_001544235_1_1_227	-	471518	.	UniProtKB:R2PRN9_9ENTE	tail-tape-measure-protein-	MENDKEKTPLSEAKKSLAGVQQALKSMSGEYALLSGYLGKISAGVNQSATVMNTFKTVMQQSGETVKKTGDETAKAADQMNTALTDSAEQAGEAAKKAGKETSDGFTNAQNNMLSFGTAMTSAVSLPMLNVLKTAMGVGAGVSGEFQGMQGLIMASAGGISDSLQGELQGALTQMNQSFEAAAQVIQSVMAPGMEILVQVVITVVKGITALVNLFIKLPKPVQVFIVAIMGILAAIGPMLIMVTMAQQKFQQFSAGLALVQGNIGKLGGGLSKLSASFSALGGGPLILIVAAVLAAVAAFIYFYKTNETFRNSINSLASAIQGAVSAAFGKLVGLLQQIQPAFQQIMAVFKQFFAVGLEKMATIFSTIGCVLAGVFASGLQLGSNLLGQFGGTFDKAGLAVGLLVKVLTKVALAALGISGPFGLIISLIVSFVTAWMKTGDLSAGGITQVFDNLGNTITSVTTMLAANLPKVIQLFTTVLTSILGKITEAIPSIVTALSSLITLIVGAIVANLPVLIEAATQIITTLIQGITTVLPMLIEVGLSLLMTLVNAIVTALPTITTAAINIITTLVTAFVTALPMLVTAGVSIITALVNAFVTMLPLILTAGLQILMALITGIMTILPQLIQSALTIILALVTALVGALPQIISAGVKLLMALIQGIISILPTLVAAAITLILTLVNALIGALPQIISAGVKLLIALIQGIISILPQLVTAAITLITALMGAFINALPQLLSAGIQLIQALINGVLSLLGTLLSAAGTLISQMITKIGSYFGQLLASGGQLVENIKNGVTNAADQVKNAIGSVIEGAWQAIQGWFSKFTDAGANIVGMIADGITGAIGKAKEAIDGVVSKIRNFLPFSPAKEGPLSDLHKLNFGGTIATGIYAGETAVSRAMASILDLPLLNDFALDLAGRGNFTATIDHRLENDAYNRPLFVTVESTLDGKVVAATTAPYLATELQRQQVKQNNRLGRRG*	hallmark_hmm	common_virus	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0007	persistent	direct	high	2933	1.0	GCA_001544235.1_00233
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	244791	245147	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	9871	10227	GCA_001544235_1_1_228	GCA_001544235_1_1_228	-	471518	.	PFAM:PF12363.7	tail-assembly-chaperone	MYHDIALSAFRYLGCRSFEEVDRMTMSEFELRMIAFNLAEVDEERKRHELAYLNVKAQATNKKGKPVFESFKSFYDYEKRVAEVLAANQPQRTKLNERKKTQLATVAERLRRYRKGGE*	phrogs_hmm	hypothetical_protein	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0008	persistent	direct	high	356	0.997	GCA_001544235.1_00234
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	245165	245524	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	10245	10604	GCA_001544235_1_1_229	GCA_001544235_1_1_229	-	471518	.	PFAM:PF12363.7	tail-assembly-chaperone-protein	MNLEINGKTIEVKFTIGAIRELDKRYQIENGAAKFGMGISSAMIYLRQYNPVILVDIMEALQSGQLKIGKSEIEAWLMTQDVKKLSDDLLKEMGKQPLTKPMIDQFSKEAKKAEAQATN*	hallmark_hmm	common_virus	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0009	persistent	direct	high	359	0.997	GCA_001544235.1_00235
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	245800	246069	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	10880	11149	GCA_001544235_1_1_230	GCA_001544235_1_1_230	-	471518	.	PDB:5A21_H	major-tail-protein	MGEVMQGKDRILLVRRLDEAATKKAMKPLFQIEHEWEFSRESSGTQTKDGVANAVSGLEVTLSLSGLASRDDENLYMKDAVEDGILMEF*	hallmark_hmm	common_virus	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0010	persistent	direct	high	269	0.996	GCA_001544235.1_00236
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	246082	246474	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	11162	11554	GCA_001544235_1_1_231	GCA_001544235_1_1_231	-	471518	.	PDB:4ACV_B	Antigen-protein	MNEAEQELYEALVAICQTSGFLLLEELPTDLPDQPFVYLGDSKELPKPTKSAILGEIELIMHVYGALSERQQISTIKGTILRQATSNLKRTAHFNWGIKHQEVKAQMVKDTKQMKKTIWHAVLPLHMQFY*	common_virus_hmm	common_virus	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0011	persistent	direct	high	392	0.997	GCA_001544235.1_00237
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	246720	247127	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	11800	12207	GCA_001544235_1_1_232	GCA_001544235_1_1_232	-	471518	.	TIGR01636	phage transcriptional activator, RinA family. This model represents a family of phage proteins, including RinA, a transcriptional activator in staphylococcal phage phi 11. This family shows similarity to ArpU, a phage-related putative autolysin regulator, and to some sporulation-specific sigma factors. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MRTSTFNYIKDILADFYKTDEYIRQREEELRHPYQEADLNAGIRGQGLHSVVTERMAITIAMDRRLWNLERNRDIIKNCLAEADEQTRVIIEELYMKKRPSLTLIGLAQQLFISKSQAYKLRNHFFEAVADELGM*	mmseqs_cdd	nonviral_gene	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0012	persistent	direct	high	407	0.998	GCA_001544235.1_00238
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	247147	247518	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	12227	12598	GCA_001544235_1_1_233	GCA_001544235_1_1_233	-	471518	.	.	hypothetical protein	MSNLTKRKKDLFEMKSVVFKDISKQQSEKAQKRKRLLQLMNQYPDWASQKNKLIMQEIQELGQAIGNWSMDQSRPIQSIKAASFTKSEYLYLIWLGYSDEAIRHGLDMSKECYFIYRLTLLNE*	.	hypothetical_protein	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0013	persistent	direct	high	371	0.997	GCA_001544235.1_00239
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	247511	247603	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	12591	12683	GCA_001544235_1_1_234	GCA_001544235_1_1_234	-	471518	.	.	hypothetical protein	MLTIIIGFIFWTMTLMLGYLIGEREGRKHE*	.	hypothetical_protein	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0014	persistent	direct	moderate	92	0.989	GCA_001544235.1_00240
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	247606	248448	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	12686	13528	GCA_001544235_1_1_235	GCA_001544235_1_1_235	-	471518	.	PDB:4M4W_K	Replicative-helicase	MHATDQTFQILLSQLLEKVEDRCPECGSEQYVWQQKNKDGTERCAPTCWSCGYKMLKKHEQEATQQRSQESFMARTQKFFHQGSLIADDALRQCRLTNYQTTELETRQAKERALAAVSAIVEGKPIHVIFSGKPGVGKSHLAISILVEVLERSAYQKYCLFVSYSELLEKLKMSMNESAKSQAKAQAYITRMKKADVLVLDDLGAELGIKNKVSTDFNNDILNRILEARQNKATIFTTNFSGKQLVEAYGTRIISRLMKHASGYVFQYKDTTDKRMRSVK*	rep_hall_hmm	common_virus	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0015	persistent	direct	high	842	0.999	GCA_001544235.1_00241
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	248467	249222	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	13547	14302	GCA_001544235_1_1_236	GCA_001544235_1_1_236	-	471518	.	PFAM:PF09681.9	phage-replisome-organiser	MFAKTIIDSDAFLDMPLSSQALYFHLAMRADDDGFINNPKKLQRMVSCGEDDLKLLMVKKFILVFESGVIVIKHWKIHNYIRSDRYKPTLYQEEKNQIVEKNSKAYRFKGESSVSGQPADYQRLPQESIVQSKLGQSQGSSSENDCLKMIYHFYEENGFGTLASKTSQDFKYWLQDFIQKGSSQEEACQLILHALGIAVDRNKRNYGYVNAILKSWEQQNYLSVHEVLVNDKKQVSEHAPQMTEEYQELGF*	rep_hall_hmm	common_virus	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0016	persistent	direct	high	755	0.999	GCA_001544235.1_00242
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	249620	250102	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	14700	15182	GCA_001544235_1_1_237	GCA_001544235_1_1_237	+	471518	.	PDB:2FJR_A	Repressor-protein-CI	MNIFAVRLKEALTAKNIKPSDLAKKTGIGKSSISDWLAGRYEAKQDKVYRIADALDINEAWLMGQEVPMEKNASTIDRIYKKLEPQRQAIVYQFAEQQLHEQQTQAEILSFPRRDEMTLAAHAGDPEKIFSKEEIEKIHDYLDEIDAKYQQSISSDKKED*	common_virus_hmm	common_virus	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0017	persistent	direct	high	482	0.998	GCA_001544235.1_00244
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	250137	250622	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	15217	15702	GCA_001544235_1_1_238	GCA_001544235_1_1_238	+	471518	.	PDB:3DTE_A	IrrE-protein	MNGKVNDYEKLVSSIQKDVTVLEIDLYNQTGCYGLYRNGKIYIEKTLSTRQKKNILAEEYGHYQTSVGTILNQNCTENRKQELKARNVALEQLVTLDDLIRCSEAGLSNHYSCAEFLEIDVETLKNVITYYRQKYGATYLYKGRIFEFRDYSVMVLNTGLT*	common_virus_hmm	common_virus	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0018	persistent	direct	moderate	473	0.973	GCA_001544235.1_00245
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	250682	250912	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	15762	15992	GCA_001544235_1_1_239	GCA_001544235_1_1_239	-	471518	.	.	hypothetical protein	MKRIVAYYKNGDRYLKEMGSGKSSLHFFLFFFVLHSMREHIIQFIGFWPSFIFVLILVPNLMLGVGHINHWYKNRS*	.	hypothetical_protein	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0019	persistent	direct	high	230	0.996	GCA_001544235.1_00246
GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote	cenote	CDS	250995	251345	GCA_001544235.1	BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235.1_BCQC01000001.1	GCA_001544235.1|BCQC01000001.1	GCA_001544235_1_1	GCA_001544235_1_1@C17	16075	16425	GCA_001544235_1_1_240	GCA_001544235_1_1_240	-	471518	.	PRK13818	ribosome-binding factor A; Provisional	MANYRDRRVGQEIMREVNDILNKRIRDPRVQGITITDVRVTGDLQQATIYYSLLSDLASEQQKAQQGLDKAKGLIRKELGQRLTLYKTPELIFERDESVQYGNHIDELIRKLNQGE*	mmseqs_cdd	nonviral_gene	C17	16425	234921	251346	GCA_001544235.1|BCQC01000001.1@region_234922_251346@tool_cenote_CDS_0020	persistent	direct	high	350	0.997	GCA_001544235.1_00247
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	30616	31272	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	1	657	GCA_001544235_1_11_27	GCA_001544235_1_11_27	+	97334	.	COG0637	Beta-phosphoglucomutase or related phosphatase, HAD superfamily  [Carbohydrate transport and metabolism, General function prediction only]. 	MKKFDGVIFDMDGLLFDTELIYYTSTQKVADAMGLPYSKEVYLDYVGISDEEVQENYRRIYASYGHDTVEEFIRRSYDDTLQEFQSGNVPLKPGVVEFLDFLDDQKIPRLVASSNVRPAIEMLLSHAGIQDRFVGIVSAEDVKRAKPDPEIFQKARQLLGTEAPKTLIFEDSFHGVSAAHSAGIPVIMVPDLLQPTEVIQEKTLHVLESLHQAPHYLK*	mmseqs_cdd	nonviral_gene	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0001	persistent	direct	high	656	0.998	GCA_001544235.1_02209
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	31328	31879	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	713	1264	GCA_001544235_1_11_28	GCA_001544235_1_11_28	+	97334	.	PRK00024	DNA repair protein RadC. 	MQVSDLFIREMPSDCLPRERLLAIGEKALSNQELLAILLRTGSKEADVMTVAATLLKQFKQLSYLQQATLNELMAIKGIGQVKAIELRAAIELGCRIYQSSQIKFGKVTSSQQVAQRLLQEMKGLQQEHLICIYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSG*	mmseqs_cdd	nonviral_gene	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0002	persistent	direct	high	551	0.998	GCA_001544235.1_02210
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	31901	33268	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	1286	2653	GCA_001544235_1_11_29	GCA_001544235_1_11_29	-	97334	.	PDB:4BQQ_A	Integrase	MANEIKQVALYIRVSTDQQAKHGDSLDEQQHTLNEYVRQQGNMRVFKTYIDDGISGQKLYRDEFQKLLDDVKKGRIDTILFTKLDRWFRNLRHYLNIQEILDKNNVTWLAVTQPFFNTETAMGRSFVNQSMGFAELEAQMTSERIRAVFDNKIRKGEVVSGKVPLGYEIKDKHLVPNEKAEIVKEIFQYYLETGSMRATVRHLENHFSMTRDYQSVRQMLTNRKYIGELRDNKNFCEPIIDRDVFERVQLQLSKNIRMNKKRDYMFTGLLVCSECGCNYSATAVISRYVRKDGTTNPNERHLYRCTKNRNNVKKCSNKKGIYETTLENFLLENIEKQAEELSVKMQQEPEVKKTKNTNDKIKKKIDRLKKAYLNEVITLEEYKKDREELEALLIPERDNKIAKIDLNSLHNYSTAEFRDGYKQLTISEKSSLWRQVIKNIVVYPDGNLKINFLGY*	common_virus_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0003	cloud	direct	high	1367	0.999	GCA_001544235.1_02211
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	33378	33809	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	2763	3194	GCA_001544235_1_11_30	GCA_001544235_1_11_30	-	97334	.	.	hypothetical protein	MKKIAMLGLVVISIISLAACTDSEVTKVDYDKTNNSIVETDSHAKAEFATIAEKQITKNYAIDNFKIDLSSIKVNQFPDEINADTGEVYKNVMNGGGKFTFQDKIYDFSLIYSKKDESKYTVLYLYSPLDKTKTMEIPLKSDQ*	.	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0004	cloud	direct	high	431	0.998	GCA_001544235.1_02212
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	33897	34241	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	3282	3626	GCA_001544235_1_11_31	GCA_001544235_1_11_31	-	97334	.	PDB:3DTE_A	IrrE-protein	MKSIKELVEEYNVELVFTTLHKKACFESEHGVIFVNQNLSTEEQEEAIYHEFKHVKDHADLMALYNIPIFRSKMEAEAEHYMFECLIEKNDGQFNYSNVITHYNLKMGQETYLK*	common_virus_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0005	cloud	direct	high	344	0.997	GCA_001544235.1_02213
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	34259	34591	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	3644	3976	GCA_001544235_1_11_32	GCA_001544235_1_11_32	-	97334	.	PDB:1PRA_A	Repressor-protein	MTAFDRIKKITDRRGISINELENRVGISQNVLYGWKKKTPGGENLTKVAKYLNISTDYILGIVDNPEPFVEKKTDDLDDVLDNVMSFDGEPLDDHDREVIRAYLKGRFGK*	common_virus_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0006	cloud	direct	high	332	0.997	GCA_001544235.1_02214
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	34912	35088	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	4297	4473	GCA_001544235_1_11_33	GCA_001544235_1_11_33	+	97334	.	PFAM:PF10078.8	transcriptional-repressor	MSQDLAIDVRAALIRAGKNQSWLAKQLGISSPYLSDILHGRRRSEEQVQKIKKILNIK*	phrogs_hmm	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0007	cloud	direct	high	176	0.994	GCA_001544235.1_02215
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	35099	35242	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	4484	4627	GCA_001544235_1_11_34	GCA_001544235_1_11_34	+	97334	.	.	hypothetical protein	MADQVNIDLLGQAYCNVMTRKTGITHTYTIKGKDDKKQNEKNVQKPK*	.	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0008	cloud	direct	high	143	0.993	GCA_001544235.1_02216
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	35214	35435	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	4599	4820	GCA_001544235_1_11_35	GCA_001544235_1_11_35	+	97334	.	.	hypothetical protein	MKKMYRNLNRLTYGLYIFGVGLLIGTKADGKILLIYALVLMTYNLVIELCSFNSWIADNAGEHYKRKQNREVK*	.	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0009	cloud	ambiguous	low	30	0.135	GCA_001544235.1_02216
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	35436	35852	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	4821	5237	GCA_001544235_1_11_36	GCA_001544235_1_11_36	+	97334	.	.	hypothetical protein	MNVFDVIGIVAIPLAILCFHNWVISERLSEAENRINSLTIQQMNSRPTFQDSRTGAVLPTRQQAIPPHMKTKTKSVLNEHETEMVKEVVLEKIDVLKNNLQFMQSNQRKHNSVYTLNQLERQLTLYERIYKKMSDDEE*	.	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0010	cloud	direct	high	416	0.998	GCA_001544235.1_02217
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	35961	36185	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	5346	5570	GCA_001544235_1_11_37	GCA_001544235_1_11_37	+	97334	.	.	hypothetical protein	MIEVRGLSDDVYELMLANAQNRIVQSIRTAAANGNTSCVVNSKGLTSTFLSQLETEGFDHVELEENKTKIFWEW*	.	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0011	shell	direct	high	224	0.996	GCA_001544235.1_02219
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	36188	36289	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	5573	5674	GCA_001544235_1_11_38	GCA_001544235_1_11_38	+	97334	.	.	hypothetical protein	MPEFDSLGARQEPLEEKEALEPTWEYDEEEENQ*	.	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0012	shell	direct	high	101	0.99	GCA_001544235.1_02220
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	36286	37251	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	5671	6636	GCA_001544235_1_11_39	GCA_001544235_1_11_39	+	97334	.	PFAM:PF03837.13	RecT-protein	MMGEIILQKDVTDAVSNRIKGLEQDGLQLPANYNASNALKSAWFAIQKVQDRNKRPALEVVTKESVANTLLDMVVQGLSPAKTQCYFVVYGKELQMQRSYFGTQAVLKRLSNVKDIWAEVVHKGDVFRIGSEKGRTVVKEFEPDFANQDNEIIGAFAVIEKNDGERVYTVMTKKEIDKSWSKAKTKNVQNDFPGEMAKRTVINRAAKTFINTSDDSDLLTDAINRTTEYEYDENRRKEAEPVADTAIALEEKLFANNKKVIEQENDIEQANPIEKEDLTKTAEQILEEPVQETLDVMAGYETNQKESEADVSTIEEDDYPF*	common_virus_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0013	cloud	direct	high	965	0.999	GCA_001544235.1_02221
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	37214	38029	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	6599	7414	GCA_001544235_1_11_40	GCA_001544235_1_11_40	+	97334	.	PDB:3L0A_A	Putative-exonuclease	MSQRLKKTIILSDENYYSQEADLAYMSVSQYKKFLECEAAALAKLKGEWTPENDPKALLVGNYVHSYFESPEIHEAFKEENKSKMFSSRKPFGLLKDFQIAEQMIERLKQEEAFLNIYQGEKEVIVTGEIGGAMWKGKIDCLNLEEKYFVDIKTTKDMHEKKWDERLNRKANFIERFGYVLQMAVYCELLRQQYDKNFLPLIAAVSKQTPSEAKLITISEEKMIYELEELKENIEHVVRVKKGEEEPISCGTCEYCRGHNKITNFTSMDDL*	common_virus_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0014	cloud	direct	high	815	0.999	GCA_001544235.1_02222
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	38045	38821	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	7430	8206	GCA_001544235_1_11_41	GCA_001544235_1_11_41	+	97334	.	PFAM:PF07261.10	DNA-polymerase-B	MAIGGWIKLYRTIQDHWIWENPQYLKWWLDLIFMANHQDRKILFDGELKTVKVGERITSEKKLSERWEVSRNTVRKFLDLLVKDDMIELSRSRQNGTWYKVSNYAEYQSFSEMKKQRSEQQAAHQTEQRTEHKQEPKEPKNLRSNNNNNKGSSIRSIWENNGFGLMSSKTMTDFDYWISDFEKIGASQKDAEQLIVKAIEIAIDANARNYNYINAILKDWEQRGFKSVDDREAARKQKKTIKQQKSNTGHSDYDDLGF*	rep_hall_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0015	cloud	direct	high	776	0.999	GCA_001544235.1_02223
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	38833	39672	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	8218	9057	GCA_001544235_1_11_42	GCA_001544235_1_11_42	+	97334	.	PDB:4M4W_K	Replicative-helicase	MQSASDGFSKMIKTLLYITPDPCPECGGNLYAWRAKNKDGSDRCPPTCMECGYKARKKAEDLETEKMFNDSLKARAINYLKYSSLYTDKNLINCRFKTYKTVDTETKLAFEIAKRATTEILLNKPIHMILSGKSGVGKSHLAMSTAWEVLEKSNYDKRCLFISYAELLEQLKFAMKDEQVRKTITGTLMAEIKSADLVVLDDLGAELGVKGNDSTNFNNDTLNRIVEARQNKATVFTTNLTGKEMSQAYGERILSRIMSNSQGFVMKIEGTSDKRVSGI*	rep_hall_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0016	cloud	direct	high	839	0.999	GCA_001544235.1_02224
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	39958	40422	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	9343	9807	GCA_001544235_1_11_43	GCA_001544235_1_11_43	+	97334	.	PFAM:PF06356.10	Endonuclease	MQSPTALNKRGNKVTLDGYIFDSEKEAKFYQRFVKTCGLPFEVHPRFIMHEKCEIPGGNISSIAYSPDFIIKDHDGNWLHVIDIKNSFGAYGIDQSNKLRFRLFAMKYGHPVEAVVIRSNDFKVITQGVTKPLNEKKPFITNNFNYHWRQATNY*	common_virus_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0017	cloud	direct	high	464	0.998	GCA_001544235.1_02225
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	40434	41039	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	9819	10424	GCA_001544235_1_11_44	GCA_001544235_1_11_44	+	97334	.	.	hypothetical protein	MTKQVNFRPEVKKVTSKSNGNIEVLLVVSNASLKGKYESLNEFLGKTVSTTIEPETVEYKIPVNKQTNKPNVEYVVNNDGTVEVLKEEQTSLEMGDDVQEVEEVAVQVSKETIDEFIKKATTIEWPESVTINVRGVLHRIDEGEALEEIAADHDVSVDNLINQVEIARQHFAPFADSWSKNKENIIFPEKTVEDDEEEIEE*	.	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0018	shell	direct	high	605	0.998	GCA_001544235.1_02226
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	41055	41261	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	10440	10646	GCA_001544235_1_11_45	GCA_001544235_1_11_45	+	97334	.	.	hypothetical protein	MFILLEIYYTPTSAIIADALAKTYEVVSLDKARNIAKKFKASLKQKTDLYVIEGILIDAGYKKEPVNL*	.	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0019	shell	direct	moderate	197	0.952	GCA_001544235.1_02227
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	41315	42058	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	10700	11443	GCA_001544235_1_11_46	GCA_001544235_1_11_46	+	97334	.	PDB:4U7P_B	Adenine-specific-DNA-methyltransferase	MIVWALFDSGNGCYKRSAQKFEDIEIYSIGLDIENKNDHFIHLNLADYSYMFNDNKLFKVLDKLPKPDLIIASPPCESWSVASAMKNGNACWKREDVTDNLFAPQILPSPFTIRTTKDYEDTNYVYERQFLKRVNGELTVFNTIKIIKKYQPRYFIIENPANGKIWEYIEDVLNFKLPFKNLTRYNNYDYPLQKPTKFASNIHLGLKNKVIKQEIAWGNFSKSYNERSNIPEKLVDDIFKKVLEKNK*	common_virus_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0020	cloud	direct	high	744	1.0	GCA_001544235.1_02228
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	42112	42765	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	11497	12150	GCA_001544235_1_11_47	GCA_001544235_1_11_47	+	97334	.	PFAM:PF02384.15	DNA-methyltransferase	MKLTTEKINELLGVDDAYKAPEALMNILLSRDKREIVFNKFLEIEKDLTFDWFHEYFQDEHADRKVKKQDFTPNSIGEVIAKIVGPGSGLTHEVASGTGGMIIQKWRADRLSIGFFEYKPSMTFYDLEELSDRTIPFLLFNLAIRGMNATVVHGDSLDRKIKQIYFLQNSKDDSLAFSDVNVMPHSDVITREFQVREWLEEAIDHIESPSVLGGENE*	phrogs_hmm	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0021	cloud	direct	high	653	0.998	GCA_001544235.1_02229
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	42762	43706	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	12147	13091	GCA_001544235_1_11_48	GCA_001544235_1_11_48	+	97334	.	PDB:1Z19_B	Integrase	MSKRPRLFTGYFLEWIETYKVGAIRDISVSKYYIAHKHLTEICPDLTIDKLDRKAYQSILNEYALTHERQTTMDFHHQIGSCVRDMYHEGLIKRDPTYKAIIKGIPPRPKKKKFLQKGELQKLLKSLELGEGINMDWFILLVAKTGMRFAEAIALTPADFDWTRNTVSINKTLNYKNSTMFFQDTKNKSSVRTISIDWQIVGQFKPLIENLPQDELIFVNRDEKTGKYKRIFNSTYNSHLIRKCKESGITVITMHGLRHTHASILLADGVSTHSIAKRLGHSSVTTTQETYMHIIDELQSKDDEKILGALMQLS*	common_virus_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0022	cloud	direct	high	944	0.999	GCA_001544235.1_02230
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	43719	44312	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	13104	13697	GCA_001544235_1_11_49	GCA_001544235_1_11_49	+	97334	.	PFAM:PF13921.5	transcriptional-regulator,-D5-like	MYRKWTEDELVYLEYFVFENDTQLIEASKYLNRSINAIRKKLCKMRKEDNFRCYMHRLWSEKEDEFLKKHYLSMKNKYIADRLNRTVGAVEFRAKKLGLTKHKKIKELDTEIRRLIDEDYYLSQICTKLNIKMSSLIAHCQREKIPYKKMPRTEYKNYGNHVWNVQDKVRFQEYLSKQELKASEEDDSKVSRGISDE*	phrogs_hmm	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0023	cloud	direct	moderate	431	0.726	GCA_001544235.1_02231
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	44275	44814	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	13660	14199	GCA_001544235_1_11_50	GCA_001544235_1_11_50	+	97334	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MIPKFQGGLAMNKQELIEELECLEVPTDSLDYLKGANYAVEKAISLAKQLDEPKKAILPKTADDFIEESLGMGSDKVDIIGSADSFLSAMPDDEFSLWFKSNRDLFVNALANGYEVEKEPLYHVLLSDKGATNIGYTFLNLAGTIDFTICKEKVDTLTENQIKAIDERYWPFAVKVDGN*	mmseqs_cdd	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0024	cloud	direct	high	539	0.998	GCA_001544235.1_02232
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	44814	45299	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	14199	14684	GCA_001544235_1_11_51	GCA_001544235_1_11_51	+	97334	.	PF06319.12	DNA repair protein MmcB-like	MKTDLTRQAEKCLWHYTNKMGVFGCFEVTIGWRGKERVDFMTYSTDNTIRCYEIKVTMADLKSSAKQTFLGDYNYLVVTNELWEKIQANPELGWKYYNQGILVFSELSHNLGITSVKKAKKQNVTLGTRATVLESMVRSLNREVEKFYKVKPFWGLSEEAK*	hhsuite_tools	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0025	cloud	direct	high	485	0.998	GCA_001544235.1_02233
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	45300	45617	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	14685	15002	GCA_001544235_1_11_52	GCA_001544235_1_11_52	+	97334	.	3VKW_A	Replicase large subunit (E.C.2.1.1.-, 2.7.7.-	MKIIARDRGTGKTTELVKESARTGQYILASNKSHVRAIEQIAKKAGVTIPYPVTVDEIVSMDRFTCASSIQRDGLLVDEAIMVLIKLIGLKITGATISLEGEQQC*	hhsuite_tools	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0026	shell	direct	high	317	0.997	GCA_001544235.1_02234
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	45611	45847	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	14996	15232	GCA_001544235_1_11_53	GCA_001544235_1_11_53	+	97334	.	.	hypothetical protein	MLSYPEVYILERQVDGIYVEYLHGSEQSDLFFDYAIACDERNHMNQTNTKDGEWKILKYGRPITVELNNKKANRPLVD*	.	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0027	shell	direct	high	236	0.996	GCA_001544235.1_02235
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	45990	46523	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	15375	15908	GCA_001544235_1_11_54	GCA_001544235_1_11_54	+	97334	.	PFAM:PF05263.10	transcriptional-activator	MWITLWKSRYHYTTNHKRGNQRMVLFDVKKYETPDAKDVDMEQTKHNVSVFLSAYLAARCRVGQPREPKVTASFSLVPPSTANNVFEAEQMLIQKEEAQEEFDYLHKLFVRGYSAIQHPHKPDVTERRKRIFYDRYINGNPIYLAAQRNCISEESVKQESNMIIVQFASALELVAFK*	phrogs_hmm	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0028	cloud	direct	moderate	467	0.875	GCA_001544235.1_02236
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	47052	47468	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	16437	16853	GCA_001544235_1_11_55	GCA_001544235_1_11_55	+	97334	.	PFAM:PF09124.9	endonuclease-VII	MRVLIRSSASGKEYWDTEEKRNVFVPKGQETDFEVTENPESMLSKEADLHVGGLPITVGNVTVDTDGIKYEQSNDEPIDSDGHTEMDMAGDAGTNNDELSFDKMSVKELREYAKRNDIEIPSAVRVKAEILNIIKESE*	phrogs_hmm	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0029	cloud	direct	high	416	0.998	GCA_001544235.1_02238
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	47468	47836	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	16853	17221	GCA_001544235_1_11_56	GCA_001544235_1_11_56	+	97334	.	PDB:5H0M_A	HNH-endonuclease	MRYCQFEGCSNTTERGAYCSEHARSSRKKKKQGNVYHHKNKSFYRTKAWQDVADFVYEREGGCCQRCGRFVFGRQAHRHHVIPIKKNEMLKLDPNNIRLLCPKCHVIEENESDEKKVFPSYF*	common_virus_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0030	cloud	ambiguous	low	2	0.005	GCA_001544235.1_02238
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	47949	48401	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	17334	17786	GCA_001544235_1_11_57	GCA_001544235_1_11_57	+	97334	.	CDD:pfam05119	Small-Terminase	MTTKAQRKAIIDEKVNHEKARILEIMRKSDLYTITLDPLIESYLDIFEVYQYKYMLWKEKGFPETQKTTNKAGATNNSKHPLAQQVEVWADKKMKALDLLGLTNKSKAGRQITGGSTARAGEEIKRPEEKPVDELAKHRNKWRKKAGNET*	hallmark_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0031	cloud	direct	high	452	0.998	GCA_001544235.1_02239
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	48398	50125	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	17783	19510	GCA_001544235_1_11_58	GCA_001544235_1_11_58	+	97334	.	PFAM:PF03354.14	Large-Terminase	MIEPGVNYADLFAKEVRKHPKKYPKTVRLAIDRWYRWKKRKDIWFDVDRANEMMDWVESFIVHTKGDMVGKPFLLESWEKFIYSWIYGWVKENEKGQVVRVTREAYVQIPKKNGKTLIAVGALGYAMYGEGALSVDCYACASDFAQAQYAAKPFAATILNNPVLLDGTKIFKGPKGTVSSITYDYLHEEMAYTNKFIVQTKNIDNIEGSNPYFVLNDELHKQEKMEQYDNFKSAQISLPQPLMFNISTAGKGSSSVGIRVYKEAKEVLKRDDNDSNFVLIYEPNKNYDWTDKKVWEMCNPNWGISVDLSALESAFKTAQRSAHSKAEFLTKHLDVFVNGADNFFEQDQVEPCLVSTNELGNLSGEPCWIGLDLSKSRDLTCVSLNFPTWDAEGKAILKVKQLYFIPSENIDFREKEDNVPYSELAEQGFVEFCDGKLIDQEQIFHFIEDCMDFYDVQQVNYDPAMSDRLVEKLENLGLECIQVDQYARVLNSPLEDTERLFYEQRIMFDNPLFLYCALNVVVKMDFQGRKVPSKNQSKRKIDGFVAFLCAHKETMDQMIDVNEDDMDNYLDSIYR*	hallmark_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0032	cloud	direct	high	1727	0.999	GCA_001544235.1_02240
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	50144	51370	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	19529	20755	GCA_001544235_1_11_59	GCA_001544235_1_11_59	+	97334	.	CDD:pfam04860	Portal-protein	MKLRDRFSNAVYGFLEKRGWIEDIYGNSTRYSQRYVNDSSIMESSDVYELVQDISNQVALAEPVVIGPDGEEVKNHFLLNILKKPNNYLTGFEFAKLETNTLLINGEAFPITDNDQLHLGYGVQTTIDDRLIEKFSMNGQPIPRNMIRHIKNIGVDSLKGAGIIDLAKSTLEGVLSAEKVLTDKYTKGGLLAFLLKLDAHINPNNSAQQKIVKAILDQLEGVQDDSNHSVKMIPLGKGYSIDTLKSPVDDSAILNYLGVYKKDLGKFLGIDVNTYQSLMKSDIEKAMMYLHNKAIKPILKNKSEHYSALFFTPNSGYRVEWKINILDFVPYSTKTNIGYNIVRTGITSPDNVAEMLGFPKQNTAATQAVYISNDLTEIGKKNATDNSLTTEHDLKGGDKNEETGNSDI*	hallmark_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0033	cloud	direct	high	1226	0.999	GCA_001544235.1_02241
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	51342	51914	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	20727	21299	GCA_001544235_1_11_60	GCA_001544235_1_11_60	+	97334	.	PFAM:PF04586.16	prohead-serine-protease	MKKQEIRTFDITNLTTRSEEDSQTQIVTGYAAVFNSPTELWDGLNEVIKPGAFSRALANSDVRCLFDHDWGKVLGRTKSGTLKLEEDEKGLRFEVELPNTTIANDLIQSMTRGDINQCSFGFYPTEETWDYNSEPVLRTINEVELYEVSIVSLPAYEDTEAALSRNKQEMKQDIKTRKNLIKKIKTALEA*	hallmark_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0034	cloud	direct	high	572	0.998	GCA_001544235.1_02242
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	51926	53281	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	21311	22666	GCA_001544235_1_11_61	GCA_001544235_1_11_61	+	97334	.	CDD:pfam05065	Major-Capsid-protein	MNKKLLRQLQARHEQRLSDLKGQIESGEVREADLDSINEEIDGLIDELKGIKEELDEVSTDEEPSDENNDSENSDTTVVAATDTDGEGRSTEVEEENRSGMISQEQRDGLLGSIRNGMQARNTLSKEKREKEIRKAFANFVVGNITEQEARSLGIEAGNGSVTVPEVIASEVITYAQEENLLRKYGTVKRTAGDVKYPILVKKADANVNKKERKTDIVETAIEFDEILLDPSEFDALATVTKKLLKMSGVPVEDIVVEELKKAYVRKEINYMFNGDDAGNENPGALAKKAVAFKKPVDLTAAGAGQKLYDALIEFKNTPVTEVMKKGRFIINRAALTAIEKMKTDDGFPLLRPFTQAEGGIGYQLVGYPVDWTDAADKKGEPDTPVLYFGDFSAFKIQEVIGALEIQKLVEKFSGKNQVGFQIYNLLDGQLVYSPFEPAVYRYEITKPVGG*	hallmark_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0035	cloud	direct	high	1355	0.999	GCA_001544235.1_02243
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	53283	53564	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	22668	22949	GCA_001544235_1_11_62	GCA_001544235_1_11_62	+	97334	.	CDD:cd08054	head-to-tail-adaptor	MNNEAETLSLEEKFKAHIHFEEGMDASMLSFYLDMAKNYVKTATGGQEEYLILMVAGIAYEYRISEDELDKAINAITPFIIQGVIQHAEETNQ*	hallmark_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0036	cloud	direct	high	281	0.996	GCA_001544235.1_02244
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	53542	53868	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	22927	23253	GCA_001544235_1_11_63	GCA_001544235_1_11_63	+	97334	.	PDB:5A21_F	head-closure-knob	MPKRQTNNLRWKAELLNIEVALDLNDRPVTVYKSKRNLFYEDIGVTAQEKYLSQQAKTDVVRRIIVRLDKSITEKFSAVRIDSVTYKITRIYTNMDKREMELSLAYVD*	hallmark_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0037	cloud	direct	high	326	0.997	GCA_001544235.1_02245
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	53858	54196	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	23243	23581	GCA_001544235_1_11_64	GCA_001544235_1_11_64	+	97334	.	PDB:5A21_G	tail-completion-protein	MSISFEKLRATLKTVGVPVTRDKAEKGTDYPYIVYSNVSKGKKMASSKVHRRLPYYQISFYTTGTEKDLTDLENALENAGIPYADFVGIQGDENDDTVTNFYTYVRCIEDGQ*	hallmark_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0038	cloud	direct	high	338	0.997	GCA_001544235.1_02246
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	54186	54548	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	23571	23933	GCA_001544235_1_11_65	GCA_001544235_1_11_65	+	97334	.	PFAM:PF04883.11	type-I-neck-protein	MANNNGFADMADYLGTLAQVDPTKLSLESLTDAASFFVEQLLPQIPRSLLKKKHMADQVKVVIEEDRVQVVFEETAYYWRFAENGSVNQKAQHFASGTFEQNKDQIEKIMTQQILDLWEG*	hallmark_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0039	cloud	direct	high	362	0.997	GCA_001544235.1_02247
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	54536	55192	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	23921	24577	GCA_001544235_1_11_66	GCA_001544235_1_11_66	+	97334	.	PFAM:PF04630.11	major-tail-protein	MGRMSNLGKQDVYYFEGLDDILIAMMATPDEVGVAPTYSEVIRLAIATKLAIKGNGSALVKWASSKMFRRVSRETEHEIGLDHVGIPIEVMDEIKGLLAEAGVTFGKNTAREFPYFAFGFIGNIEGGGKKAVWYPKTQLSNVIDEEYATAEDDTKIDDVTANFVANGLKYNNVMYASFDSNRLSAKPGDFEKFIAQPIYDEEQWKKLVTPSTPGGGGE*	hallmark_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0040	cloud	direct	moderate	647	0.985	GCA_001544235.1_02248
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	55192	55647	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	24577	25032	GCA_001544235_1_11_67	GCA_001544235_1_11_67	+	97334	.	PFAM:PF12363.7	tail-assembly-chaperone	MAKLADYGIVVSDTPTVTIKGHQFPILLTMETMEHIADIYDDDYSKFEEDMNAMLNKSGGRISSKDLSASDLKIMRALIYGMLKTGGLDETPETIFKFLGMNSTIVEVYGACMEVFTEQNFQVDDVKKSKKPQDYQTPQQKKNKKKKHKRK*	phrogs_hmm	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0041	cloud	direct	high	455	0.998	GCA_001544235.1_02249
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	55839	58136	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	25224	27521	GCA_001544235_1_11_68	GCA_001544235_1_11_68	+	97334	.	PFAM:PF10145.8	minor-tail-protein	MSKKESDVVLNFKTNGEVNYSRTIKDINKEMNLAATEYKNQVSAMDKDATQTEKLTATKKKLEKQLSLAEQRTKLLREEYEKSVKETGEYSEQSQKLYKRLLESETGENKLRSALESTNEALKEQGDLSVKTAEKLAKIEKAGDKMKSVGKKMTVGLTAPIMGIGAASIAAFKELDDSLDSITTATGATGEQLESLQDSFKTVAGQIPTDMENISTGIGEVNTQFGLMDKQLEDTTGRMLKFSEINGSDVSQSTINAKKSMDLFRLSIEDLPMILDSVSKTSQDTGVGVDQLFDAVNKGAPQLKAMGLGFSESTTLIGQMEKAGIDSAGTLGYLAKASVVYAKDNKTMQDGLSGTIESIKGATTEQEKLTIASEVFGTKAASKMVEAIDSGALSMDGLADSAKNAAGTVDQTFNDILDPIDQAKIAQNQFKIAMGELGEQVQIALLPAFEAASNTIQKVSTWFSGLTDNQKQTIITIAGVVAAIGPVLVVLGTLASSISSLIPVIAFIASPIGIVIAALAAFVAGIVIAYNKVGWFRDFINMSFNVIKDIVVGVFKVLADTTKSTFDFITGFIGGAMDGAVKIISDYVNAITRIFGGIIDFVTGVFTGDWSRAWQGIVDIFGGIFEGITAVAKAPINAMITLINGFLGGLNNIKIPKWVPGVGGKGFSIAKIPYLAEGGHMINGQAIVGEAGPELLTAKNGKTTVTPLSQDEKSKGISGALKGSSTVNNYVTIGQVDANNPSEINRLNRKMFQANVWNNLATGDV*	hallmark_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0042	cloud	direct	high	2297	1.0	GCA_001544235.1_02250
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	58139	58843	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	27524	28228	GCA_001544235_1_11_69	GCA_001544235_1_11_69	+	97334	.	PDB:2X8K_A	Distal-Tail-Protein	MDRYTPNFVWKGANALLDYGLIIESELPEIVAKPRYNEITVIGSNRVLNEWFGDYEPFDLKIKDVSVSYERLPEVKRWLSGQSELITHNNVNVYVNAVCNINNEVEYVNEWGTFYSFEITFRCEPLKRKVNEPFINLNKGENTVINHGDEVSQPLIEIHSNGGDIEINCGKNTLTILDTNAGLLSLDNEMAVCTQDGRIQRTKGSWIKMLPGKNKIMITGNIASIRMKIRSVFF*	hallmark_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0043	cloud	direct	high	704	0.999	GCA_001544235.1_02251
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	58840	61584	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	28225	30969	GCA_001544235_1_11_70	GCA_001544235_1_11_70	+	97334	.	PDB:3GS9_A	tail-protein	MINPIYIYEKVPIDLSENGVSLLDWADAPEITRSLNSEYSFYGNYSLVGKNNNQIKKGYYLKAMVSDGSWQYFRIKSVDKNLHSISIKALHIGYEANRNFIQMAYTANGTGKQIMENLKSNLAFKQPFIYESNINTRHQFTAKEVNPISAIIGQNNGNENLTGVTSGELDMDNYRLMLKDRIGEDNGFRIDLGVNLESIKETVDDLNVFNSLYLIGGTPDDVNYNEDQEPVTFAFLETKGVNDENRRITSRTNSECKTIEELKKWGQSLFDKERIHEPKVTHEINMVTLENTIEYQKLYGKMMKLNFGDTVYCDIEYNGITGVKERVTECTWLPTLGKYKNIVLGNEIKSYTDSVNTAVNQITKKLEVKSEDLQNAIVNATQWITGTKGGYVRFRPKDAPEEILIMDRPNANDAKKVWRWNLGGLGYSNNGVNGPFETAITQDGSIVANFITAGILTGILVQGVALKTLDDKDFQVVMEGGKVSFERKRVSTGLNDVHGELFGDIKATYDGSGKKANGFAVRQKPGYIFSINTISKNNDVQSVPIIQIPADVHPDNKKVNSYASWSHEGKFSISGKTTLKSEMDISGILTGTIAKFDKLYVGGKEVIPGDGSGGNDGDVPPELTTEKEKNAWAVWQFLKSKGYSEQAAAGILGNMDQESGIMPDIDEGGGGPGYGLVQWTSPIAGESGRAYVQRLLAQAGISGDYRNITTQLKLLDWHMHNGQYIPSAAYPYSVAEFKALTDIGTTTMAFEANFERPAVTHPERIPLAQYWYDLLHNLKPGTNKWVNPVRSSYTITQEWDEIGWGTNVIHGGIDIASMPAGSMPPVYVARSGTVETVTYDGTGGNYVVIKHDDGYWTYYGHLDSVDLSVGDKVTTNSRVGIMGATGLASGVHLHFEVWKGAQWQRINPRDVINF*	hallmark_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0044	cloud	direct	high	2744	1.0	GCA_001544235.1_02252
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	61599	62504	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	30984	31889	GCA_001544235_1_11_71	GCA_001544235_1_11_71	+	97334	.	PDB:4DIV_C	Distal-Tail-protein	MVKWQATLSTTEPYNYIGIQNVRQGNRNTEVLEAILVENALPLDLTGCEVFFESVIDKEYPIQRAAKIVNAKKGIIQYTFDEYSMQSLHRQEAYFSIHKGDNLIGSTQNFSYFVVNAVSKTEGEMGSYWQSIEDLIADMTAFINENKGDFTAWMNARKEEFEEWRKNQQDTFEAWRNGQESDYLMWFESIKDILKTVDPGGTMLAELMDARVDIQGVRHNSLSERLLADMDYLYQRLEERLFTLKHGNVSTLEILQDDSFSTNHQVKVIGSVNRPMKDGALIIAKIDDEKQNTFRIEGVSK*	hallmark_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0045	cloud	direct	high	905	0.999	GCA_001544235.1_02253
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	62501	62818	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	31886	32203	GCA_001544235_1_11_72	GCA_001544235_1_11_72	+	97334	.	.	hypothetical protein	MIESKRMMETDEKGVKRQFFPMTHVSAIIGLSEIMGGQSMVSSVNGRSGPVIITRADLDLPKDGVMISQEEYSKITQIIADYEAGKLGGSSVEFEKVKGDEESNA*	.	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0046	cloud	direct	high	317	0.997	GCA_001544235.1_02254
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	62811	63128	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	32196	32513	GCA_001544235_1_11_73	GCA_001544235_1_11_73	+	97334	.	.	hypothetical protein	MPDLYVVKKDGVAIDVQTSTTGVVGLNEFVDAKLGDAGAGTVSSVNGHTGEVILNAADVKALPDTTVIPTIPSNATAEKDGLMSKTDKAKLDALPVFTFEKVGEV*	.	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0047	cloud	direct	high	317	0.997	GCA_001544235.1_02255
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	63128	63616	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	32513	33001	GCA_001544235_1_11_74	GCA_001544235_1_11_74	+	97334	.	5E7T_H	Minor structural protein 4, Minor	MDIVQLMENNEPKAMATVVEAVDGLENYPTKADADKSYQKIIQGSPLWTGVWYGGASGSGTTPSKPLSQCQNGWILQWQEMSSTGQANDAVFQFQYVPKNHISNSGSGGTVFNLNAYNGKNPQTKYLYIKDAKITGHDLNAPDGTAAGSGNKMYILTKIFEY*	hhsuite_tools	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0048	cloud	direct	high	488	0.998	GCA_001544235.1_02256
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	63627	63947	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	33012	33332	GCA_001544235_1_11_75	GCA_001544235_1_11_75	+	97334	.	PFAM:PF09693.9	tail-fiber-protein	MKIWIDNVKGFLQGYSLVEQPKTIEVEVNEDFSDFFNYRWDGTSLIYDPDNVPEPAPTPPTELELLQKQNAELMKQVSQQNQVIQQTQRMTGELMKQVAELTKGAE*	phrogs_hmm	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0049	shell	direct	high	320	0.997	GCA_001544235.1_02257
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	63949	64104	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	33334	33489	GCA_001544235_1_11_76	GCA_001544235_1_11_76	+	97334	.	pfam09693	Phage uncharacterized protein (Phage_XkdX). This entry identifies a family of small (about 50 amino acid) phage proteins, found in at least 12 different phage and prophage regions of Gram-positive bacteria. In a number of these phage, the gene for this protein is found near the holin and endolysin genes.	MKTNVFPGFDNIKQLYDWNCYTKQDLVDYVNMNCLTEEEYTKICGEPFSES*	mmseqs_cdd	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0050	shell	direct	high	155	0.994	GCA_001544235.1_02258
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	64138	64359	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	33523	33744	GCA_001544235_1_11_77	GCA_001544235_1_11_77	+	97334	.	.	hypothetical protein	MNLTLEQWLALITFLGGIIFALMKFYHVFSQLEDSMKELKQAVDRLNNHEVRISRLEEQNKTLFRGIGGNKND*	.	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0051	shell	direct	high	221	0.995	GCA_001544235.1_02259
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	64352	64585	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	33737	33970	GCA_001544235_1_11_78	GCA_001544235_1_11_78	+	97334	.	PFAM:PF04531.12	Bacteriophage-holin	MIDWKSRIKNKQFWLSLIPAVLLLIQVVAVPFGYKFQIDVINQQLLDVINAVFVVLTILGIVTDHTTPGLSDRKGDK*	common_virus_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0052	shell	direct	high	233	0.996	GCA_001544235.1_02260
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	64586	65671	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	33971	35056	GCA_001544235_1_11_79	GCA_001544235_1_11_79	+	97334	.	PDB:4WLI_A	lytic-transglycosylase	MKKKILAGALVALFFMPAINVDAYQVETRGNINAGWPSTVNRYIIAHDTANMDAGVENEANNMLNNWQRQEAFTQYVVGGGGRVLQVAENGRIAWGAGDANPYAHAQVELANTSNKAMFKKDYAAYVNLLRDLARQINVTFDLDDPTGYGIKTHLWVTNNLGGNHTDPYGYLASWGISKAQFAQDLQTGLPEDGSEVIVNPGKPNQPKYKVGQHVRFTTIYKNPDAPIEQHINANTLWTQVGTITQKLNGRKNLYRIENSGKLLGYANDGDIAELWENSKPTPAKTFTIGVSEGIVLRNGAPSLLAPVYGVWPKGSTFKYDSVRVADGYVFLGGSDVNGTRIYIPVGPNDGNPSNTWGTGY*	common_virus_hmm	common_virus	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0053	cloud	direct	high	1085	0.999	GCA_001544235.1_02261
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	66066	66599	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	35451	35984	GCA_001544235_1_11_80	GCA_001544235_1_11_80	+	97334	.	PF18813.1	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4	MPKDLQKTYNLFLSNLDGKMAVITTPFVKLDCFYVKFDILQLPHLLGLHKIYKDSPRIICQKLNDEVITYKHLQRHSNFGTIKDRVELFEFILEIFLEGYNDSVIYVSEADKFGSSMKLDIAFSHPHKNKILTLGLREVNDCVYAPVTFYVSKSSRPTFTKSKRAKILTLELISFNL*	hhsuite_tools	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0054	cloud	direct	high	533	0.998	GCA_001544235.1_02262
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	66799	67284	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	36184	36669	GCA_001544235_1_11_81	GCA_001544235_1_11_81	+	97334	.	.	hypothetical protein	MVRRTKKEFKPYNDYVDRPFELKWPTAFPLGELTEAIKSTDEYHARNIDRLPQQSQKQIEYFLDRSIKQNKVLEIQLNSLDEYDRVKPHVFGVFRGMAEFDVVLIGEQEIDFYDIRHIQIHNFTKWSEEYVIEENPFEEEQEHCETIDEFVDEYFNDEWIE*	.	hypothetical_protein	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0055	cloud	direct	high	485	0.998	GCA_001544235.1_02264
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	CDS	67668	67868	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	37053	37253	GCA_001544235_1_11_82	GCA_001544235_1_11_82	+	97334	.	pfam00313	'Cold-shock' DNA-binding domain. 	MEQGTVKWFNAEKGFGFISREDGSDVFVHFSAIQGDGFKTLEEGQAVTFDVEDSDRGPQAVNVEKN*	mmseqs_cdd	nonviral_gene	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_CDS_0056	persistent	direct	high	200	0.995	GCA_001544235.1_02265
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	115904	116821	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	1	918	GCA_001544235_1_3_120	GCA_001544235_1_3_120	-	231011	.	COG0276	Protoheme ferro-lyase (ferrochelatase) [Coenzyme transport and metabolism]. 	MNLGTPKDSSKTEVRKYLKTFLSDRRVIKIHPIIWKPILNGIILNIRPKKSAKLYQKICTENGFPLLEYTEKQMENLKNICPEVEVTIGMSYSEPSIETALDTLLSKEIEELNVIPMYPQYSGTTVGSVFDSVMNYFIKSDRIVDIKFIRSFYNNPQYIGYFSKKINEALNESPIDAIVFSYHGIPMSYVKDGDNYPEECTKTTKLIMDKLGDIPYYQTYQSKFGPSEWLKPATDDTLKKLPSKGIKNILIVAPGFVVDCLETIEELEHENRNYFLENGGEFYKYVHPFNGDIEFAKLVKDIISL*	mmseqs_cdd	nonviral_gene	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0001	persistent	direct	high	917	0.999	GCA_001544235.1_00984
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	117561	117806	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	1658	1903	GCA_001544235_1_3_121	GCA_001544235_1_3_121	-	231011	.	.	hypothetical protein	MGFGKWKEVIPSDKSKQFEEGQKVSFIYRKEIRSGIIAVLLINSAVINIIDSSKPKNKKEKTVISYEKLLSMYQLKDLSLD*	.	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0002	persistent	direct	high	245	0.996	GCA_001544235.1_00986
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	117905	118105	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	2002	2202	GCA_001544235_1_3_122	GCA_001544235_1_3_122	-	231011	.	COG1278	Cold shock protein, CspA family [Transcription]. 	MNNGTVKWFNSDKGFGFITGEDGNDVFAHFSAIQADGFKSLEEGQAVTFDIEEGQRGMQAVNIFKA*	mmseqs_cdd	nonviral_gene	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0003	persistent	direct	high	200	0.995	GCA_001544235.1_00987
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	118942	120183	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	3039	4280	GCA_001544235_1_3_123	GCA_001544235_1_3_123	-	231011	.	PDB:5EMI_A	Cell-wall-hydrolase-autolysin	MKKKLLATLLVVLFFVSPISTFAAKGDQGVDLSIWNGYQATFGYAHDKFSISQIGGQNNYGIYDQVTYSSQVASTIAQGKRAHTYVWWQNVLTYENAKQVLDYFLPKVQTPKGSIVALDAEDGVQSTDVTLWALDYIKEAGYTPMLYGYKGYLTSSYDLSRIAKKYQLWMAEYPDYEVTPYPNYNYFPSFENIGIFQFTSTYVAGGLDGNVDLTGITDNGYTKNNQPATNTPAIEEGKEVENTPSSDVKVGDTVKVKFSVDAWATGEAIPQWVKGNSYKVQEVTESRVLLEGILSWISKGNIELLPDAATVPDKQPEATHVVQYGETLSSIAYQYGTNYQRLAALNGLTNPNLIYPGQILKVNGSVVSNIYTVQYGDNLSSIAAKLGTTYQTLAALNGLANPNLIYSGQTLSY*	common_virus_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0004	shell	direct	high	1241	0.999	GCA_001544235.1_00988
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	120184	120417	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	4281	4514	GCA_001544235_1_3_124	GCA_001544235_1_3_124	-	231011	.	PFAM:PF04531.12	Bacteriophage-holin	MINWKSRIKNKQFWLSIIPAVLLLIQVVAVPFGYKFQIEMINKQLLDVVNALFVVLTILGIVTDPTTPGLSDRKGDK*	common_virus_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0005	shell	direct	high	233	0.996	GCA_001544235.1_00989
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	120410	120631	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	4507	4728	GCA_001544235_1_3_125	GCA_001544235_1_3_125	-	231011	.	.	hypothetical protein	MNLTVEQWLAVITFLGGIIFALMKFYHVFSQLEDSMKELKEAVERLNNHEIRISRLEEQNKTLFRGIGGNKND*	.	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0006	shell	direct	high	221	0.995	GCA_001544235.1_00990
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	120666	120821	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	4763	4918	GCA_001544235_1_3_126	GCA_001544235_1_3_126	-	231011	.	pfam09693	Phage uncharacterized protein (Phage_XkdX). This entry identifies a family of small (about 50 amino acid) phage proteins, found in at least 12 different phage and prophage regions of Gram-positive bacteria. In a number of these phage, the gene for this protein is found near the holin and endolysin genes.	MKTNAFPGFDNIKQLYDWNCYTKQDLVDYVNMNCLTKEEYTKICGEPFSES*	mmseqs_cdd	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0007	shell	direct	high	155	0.994	GCA_001544235.1_00991
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	120823	121143	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	4920	5240	GCA_001544235_1_3_127	GCA_001544235_1_3_127	-	231011	.	PFAM:PF09693.9	tail-fiber-protein	MKIWIDDIQGYLDGYSTMEQPNKIELEVEKEPTDFFNYRWDGTSLIYDPDNVPEPEPTPPTELELLQKQNAELMKQVSQQNQVIQQTQRMTGELMKQVAELTKGAE*	phrogs_hmm	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0008	shell	direct	high	320	0.997	GCA_001544235.1_00992
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	121157	121648	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	5254	5745	GCA_001544235_1_3_128	GCA_001544235_1_3_128	-	231011	.	5E7F_I	nanobody L06, Major structural protein	MTTDIVQLKEKGKPVYLKTHTAAIDGLESYIKKIDADKAYQKITKKEPLWTGAWYGGAAGNGQVPSKSLSQCENGWILQWQEYTKEGALNGACYHFFLVPKQHAQNPGSGGVIFLLHGYYTNLVRKYLYIKDTKITGNDLNASSSDTAGSGSKMFALSAIYEY*	hhsuite_tools	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0009	shell	direct	high	491	0.998	GCA_001544235.1_00993
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	121648	121935	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	5745	6032	GCA_001544235_1_3_129	GCA_001544235_1_3_129	-	231011	.	KOG3546	KOG3546, Collagens (type XV) [Extracellular structures]	MTDIVKVKQGGTQVFPQTHWNAVEGKPEVLKGEKGDPGPQGPKGDKGDVGPQGPAGQNATTTDVATSIKNGLMSKEDKTKLDGLPAITFEKVGEV*	mmseqs_cdd	nonviral_gene	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0010	shell	direct	high	287	0.997	GCA_001544235.1_00994
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	121932	122510	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	6029	6607	GCA_001544235_1_3_130	GCA_001544235_1_3_130	-	231011	.	.	hypothetical protein	MMETDENGVERQFYPITHASAVRGLEKIIAGQSKVLSVNGYTGAVIITKADLGLENALTELPYATEETDGIITAEMFQRLSNGEGGVYILPIATADELGGIKVGQLLEITEDGTLSAVKQTDQNFTTELKSKLEELKGYTAGANISISEDGVISATGGGDGGGVNQQYVDQKVQEAIDRIPDITFERVGEVE*	.	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0011	shell	direct	high	578	0.998	GCA_001544235.1_00995
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	122521	123402	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	6618	7499	GCA_001544235_1_3_131	GCA_001544235_1_3_131	-	231011	.	PDB:4DIV_C	Distal-Tail-protein	MVKWQATLSTTEPYNYIGIQNVRQGNRNTEVLEAILVENAWPLDLTGCEVFFESVIDNKYPIQRSAKIVNAKKGIIQYTFDEYSMQSLHRQEAYFSIHKGDNLIGATQNFSYFVVNAASKTEGEMGSYWQSIEDLIADMNAFINENKGDFTDWMNARKEEFEAWRDAQKTDFTSWFESIKDILKTIDPGGTMLAELMDARVDIQGVRHNSISERLLADMEYLYQKLEKRLYTLEYGEISDLIILQDDAFSLNHETEIVGTVDYPAIDGALVIATVDDTKQNAYVFEKVGEISG*	hallmark_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0012	shell	direct	high	881	0.999	GCA_001544235.1_00996
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	123421	126213	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	7518	10310	GCA_001544235_1_3_132	GCA_001544235_1_3_132	-	231011	.	PDB:3GS9_A	tail-protein	MIPVIFKPGEKDFSTNGLGRLVDATRCEITEEANGKYELEMDYPAISRFSDYFENGYQIKAKPNDLEEYHIFEIKQTFKDTFTNSIVIYAQSRTYKLGNRQVRLVTVDNRNGAEAMKLIEQNMDEPCDIKLYSDINTASSTTFEARNVLNCIAGEQGSLLQYWGGEIKREPFKLSLLRRRGRDNVGTVRYGKDLKGLTIKFDWQSIVTKVLPFAELQSGADGTSQRIYGNAVKSEYISKYPDVYAQYIQFTEDQGVKDIASLNKVASKYFTTLYPGSDKPKVSIELEIEKLTDSEEAKEFAKMRNYNLFDTFTVYHKLYDIDIQTKVTGIVYDALAEKTIKITAGDIQVAFYKQQSQDFQEAIKTLTKKEYMSDFVDYITNLINGVEGGSILQYPKNRPNTHYYLDTESTDTAKDVIAINNKGIGFSRTGWKGPFKNAWGINGVLNADFIGAGKIKSNIFETSFNSCGDILRMVNGTLQAWNNKKKIMELTKKGMEFWNGNSHVGTMGTKGNPFPGLADKNGNPVVSDGNSLLLVADNPQKIIGLSNQSGTGHLITGPTQFFVGNNFNFFGPNGSKAILTVDRLIVGGKEVIPGQNGGGGSGAGTGGYPSEVTSDADKFAWDLWSYLLANGYSKAAAAGILGNVQGEVGPSMNPDTEQIGGPAYGWVQWDGSAYPLVGAPTWNGREYVQRLIAAAGIKQDYRTSLAQAQLINWCMFNGQWLGQVSPLTVDEFKVVSSPKTAAYAFELNFERPAAAHPERQTYAQVWYDKFKDLKASTATGKAGIEHLETLMGKWLGNGQCYAVPAEYSGFMGGCGLGAGTIYGFSHVIGDTSSAADIGEAYDWNAVGWRVIQNPTYQDLVVGAIVNIRRGGQWGTGWTVDPTYGHTGVIYGLNNGRIQTIEQNAEQGQIVAKYDRLYFANSIQSIVIPPK*	hallmark_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0013	shell	direct	high	2792	1.0	GCA_001544235.1_00997
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	126210	126965	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	10307	11062	GCA_001544235_1_3_133	GCA_001544235_1_3_133	-	231011	.	PDB:2X8K_A	Distal-Tail-Protein	MQRGVLLVEFKRGQFFLNGKHSSEFNVFMRERPERLSAGRVVELRERMGNDSIAVDFAYYKNVERTITCYAKANTLQEVSFLEDEISFWLDMGNYSDFIVYFDEHYIYQAIVTSPPKFTGTRKSGVLIPFEFTVSIRPFKKNRIGQYWISNPNQLINTEKYPSEPIIQILGSGDISFFINNQSYSLKAINGDIIIDSEKQEAYRKSGGAFEILDHKTLFKDYPILKCGENNFRWTGKVTEFKVQPNWRRKV*	hallmark_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0014	shell	direct	high	755	0.999	GCA_001544235.1_00998
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	126934	129858	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	11031	13955	GCA_001544235_1_3_134	GCA_001544235_1_3_134	-	231011	.	Uniprot:T2PM72_GARVA	tail-tape-measure-protein-	MNNEDLVLKMILDESGFSQGLNSAVKKLQGFDVEVDRTGQKGGRSLGSIWTSFVGNFLASGATKIISKGIGLITSNIDGAINRVDTLNNANRVFENMGFSAGETSKTMDSLKKSIQGLPTPLDSAIKGVQLIASSTNDLGKSEQIFAALNNGILGFGGSAEMVENAIIQLSQSFSNGKVDAQTWNSMINSGLGPALNALAKQMGLTAGQMKEGLSDGSISVEEFQDALIKLNKEGGGGLKSLEQIAKDSTAGIKTGLANMKTAIVRGVANVVTKIDEGLKSAGFGSISEIIADKGAKMEAALSKFAEMIPPMIKTAKTLYDTLKPYAPLLAGLAGSIGTLMLVNKVNAAFKAWREGTEALSIAQAILNKTMLSNPFVAILTAVVGLVTAFIYLWKTNEGFRDAVKNIWKNIQEVISSAADVVVKAWNSTMEFFSNMWDGTKEAFSNAGTWMKEAPGNAADWVKNKWNGTKEFFSGLWNSTKEGSKNTWENIKQSAADSAKSVGESFKNGFDNVKDWFKGVGKSISDVFTTAFDFVWKYIGPYVTGIKNAFKMVVNAMKANIENVKMIAENVVTILKNVLLAPILFITSMITGGWEEAKENMIAVWDNIAEAAQTIWFGIKNIFYNTVTAISYSVTSIFNGLMLTIKKIWIDVKLFFTLLWIDIKYGAINVWIEIKYSIIETWINIKFEAIRIWESLKTWFFETVENIKNGVIDGWNSLKQGTVDTFNATVQWSKDTWNNFKQWIVDLVTGIKDGIINGWENLKQGTVNIFNNLVQGAKNAWNNLKRSVSDTVENVKQTFNDMRHIDLFEIGKNIIQGLVNGIGSMIGAVNKKIKEVAGNIKEKIKGALGIHSPSRWMRDMIGKNIVLGVVAGIDQEKGTLDKSVKKMTDLPTELPNFSTTGRYINQQGAQTESLAKNKGNATTNIGGDTFNINIQAMGKLNEKQLMDMAKDLVKYIQIVKNRDSDATGGAFGGI*	hallmark_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0015	shell	direct	high	2924	1.0	GCA_001544235.1_00999
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	130079	130429	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	14176	14526	GCA_001544235_1_3_135	GCA_001544235_1_3_135	-	231011	.	.	hypothetical protein	MASKFQQKIKLMIKDGSKYTTKQFMSAEFLPGSVMDTGTDLQIRLEEATKTNDMEAIRPILRECYDFIADVIFEKQFTGQEYIDGMDARELLKITAQLLGSVTSGYDAIYSEQKKK*	.	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0016	shell	direct	high	350	0.997	GCA_001544235.1_01000
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	130482	131330	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	14579	15427	GCA_001544235_1_3_136	GCA_001544235_1_3_136	-	231011	.	PFAM:PF04630.11	major-tail-protein	MAKMKNVSVISVEKPTWFPLKDETGAFPVYGTPITIGTAVSIKPDVTTETTPDYGDSVVQDQYVAFGGAEVTLETNGYQNEVLAEITGGKKLKGGVLRSADDIASDGAFAYRRRKSNGKYRYTIFYKGKFALTSDETSTLEGSSVSYTHPEWTGSFVDVPGLGYMYSVDEDDEGVDLEMIKNWFTEVMDPRKENTTAVTGVTLDQTELNLKVGQTATLTPTITPDNASNKKYQFRSESEAIGTVTPIQGKVTAVGEGTTEIVVTTEDGNFTAKCTLNVTTAD*	hallmark_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0017	shell	direct	high	848	0.999	GCA_001544235.1_01001
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	131331	131705	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	15428	15802	GCA_001544235_1_3_137	GCA_001544235_1_3_137	-	231011	.	PDB:5A21_G	tail-completion-protein	MYDKILKMLTDTIKQFSNAPIYLDDVMQSSEPFYFVLSLEESLTDNVGQNVQNKAYNVDIALVDSKKDKQLVTSLTESCGAFFNVLNLDGNELFPEDYQTFKTDGIQHINFNVAFPQLIEWSEK*	hallmark_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0018	shell	direct	high	374	0.997	GCA_001544235.1_01002
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	131708	132106	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	15805	16203	GCA_001544235_1_3_138	GCA_001544235_1_3_138	-	231011	.	PFAM:PF05521.10	tail-completion-or-Neck1-protein	MSKSDLRMKSNADKVIANLKKMTPIAEKEGAAMVNDSLAKIYQLIVPMTPIKSGDLRRGYRIIKARKLSSGRIVGALINNEKYFRYVNDGHRTKNGGFVKGRFMLQKSNKLANATYIPKRFKQMAIIIVKKG*	phrogs_hmm	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0019	shell	direct	high	398	0.997	GCA_001544235.1_01003
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	132099	132467	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	16196	16564	GCA_001544235_1_3_139	GCA_001544235_1_3_139	-	231011	.	PFAM:PF10665.8	head-closure-knob	MNEAEILAATYFDTCVIERMSDIENTESGITEQVYFPIHVGKLPCAFSQGSMGNLPVIENKEAFNISYEEQKLFLEPNIKVKKGDRITITQGTGQKHVLFSKKPFYYPSHIEVVLSGSSIDE*	hallmark_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0020	shell	direct	high	368	0.997	GCA_001544235.1_01004
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	132464	132808	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	16561	16905	GCA_001544235_1_3_140	GCA_001544235_1_3_140	-	231011	.	PDB:5A21_D	head-to-tail-adaptor	MVDEKKEEIVEKIQLMLPNASEDRILSVLNLVIFEINSYNTCKIDIAWDEFEQLIIEVIYKALKNEIDKSVASVKRGDTSISYVVESKDIQSLMKNYSSAIKRILGCDSGVFFY*	hallmark_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0021	shell	direct	high	344	0.997	GCA_001544235.1_01005
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	132822	133004	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	16919	17101	GCA_001544235_1_3_141	GCA_001544235_1_3_141	-	231011	.	.	hypothetical protein	MATAKKEVTYRVLDKKNFVGFMHPKTKKFITANENNEFVVSEDDKEAIEILERAADTFKV*	.	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0022	shell	direct	high	182	0.995	GCA_001544235.1_01006
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	133033	133920	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	17130	18017	GCA_001544235_1_3_142	GCA_001544235_1_3_142	-	231011	.	PFAM:PF17236.2	Major-capsid-protein	MKKSSLNNLEYLDISQEVNALQVPNTPFLSYLLGAGKVEAAKSTEIKWREYGMNNDDSSAQLEGGEYADAESDRTWFNNYTEIFRKSTSVSGTLDAINVDGVGNELNSQVALRATEMKIDLNRKLIVGVKADESGSKGRQMNGILNLISSTNKVETAAAGAVTRKDIDALFKTMFQKGYMGEKLCLVAPDMQELMTDQLDEKSTKIVQFGDKLTFGLQLGNIVSNYGSGIALIEPNLPNGTIAAIDTNYVKLRPLREWRAEELAKTTDSRRIGLVGEYSIEYKASNSGAILNLKA*	hallmark_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0023	shell	direct	high	887	0.999	GCA_001544235.1_01007
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	133934	134557	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	18031	18654	GCA_001544235_1_3_143	GCA_001544235_1_3_143	-	231011	.	PFAM:PF14265.5	head-scaffolding-protein	MKPNLLPMDLQMFAEGEGATDFTFDDFKAFVESNEEAQKFVQSQSQSAADKQLEAWKQNNLEKIKETTIKEYEESKKNKTPEQIKLEELQAEFEAEKALRVTSDNKAFVAEKIAGLDWDGDLKDSISQFMLNNLVSSDTEFTKKAVEGFTELLEAINDKHAEAIKNVEMTKAFGNKSQQTNMVTGNQTKSFENPEAALGQKLQAFID*	phrogs_hmm	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0024	shell	direct	high	623	0.998	GCA_001544235.1_01008
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	134775	135095	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	18872	19192	GCA_001544235_1_3_144	GCA_001544235_1_3_144	-	231011	.	.	hypothetical protein	MKGLFEAVLNLEVTNGTEKAYKKVFEQENERYLTKHTLRDGNGNIVKDGLESVWSGNYCHVDILYSIPGRKSKLTISIVSRTLQNVKDAVTDYQMLGAELVHKNWK*	.	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0025	shell	direct	high	320	0.997	GCA_001544235.1_01009
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	135160	135381	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	19257	19478	GCA_001544235_1_3_145	GCA_001544235_1_3_145	-	231011	.	.	hypothetical protein	MKILMQHLEFSFGSLNGDYSEQTLENFEYMFNRLEEDNLGYVHFDNVSEFYFNGITNEDKRVLKETIIANSKK*	.	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0026	shell	direct	high	221	0.995	GCA_001544235.1_01010
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	135378	137135	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	19475	21232	GCA_001544235_1_3_146	GCA_001544235_1_3_146	-	231011	.	PFAM:PF06152.10	minor-capsid-protein	MTKKKTTASERYWEKRRGLEDKARLKLEKKTLNELESVFERALVKIQRQLLSQADLHDITQSEMLEDFSKRDQEKYRKYIEKNYEKLMESDEAYKQFIDEYFPSFDYAKVNRLLQLRADIFSTLAGEAISSDVNGKFNNDLENITKRIYNSNSNTLMQLLGGSAPGLSKKELENILNYPWSGKTFSSRLWGNISSLEQRLSNSIINSLASGEGVLEALRTMKNDGVVSGMFKLEQGKFNRSIENLVRTEYSHFAVEGVRKSLKDVGIKQTQSWSAEDERVCSICGRRHGKEIKDDWHPPYHGRCRCTEIPMVPEISDDIDKLYEEMFGDLLDEFASKQWGIKLNHPKSTTIANRFSLSKLTEENIGDTERINDIINRTKDVISNYKNETGIDVIKLFEDKKFADKNNPYTDEKSKFIRYLLKNNGFDGLPQKVTDVDDLIPVYRGIVDFKYGDDTSQDQIDRFLRSHFDISGARSSANGRGSYFTSAKFKAQEYANNGNNGQLITAYLLEKINLLDDSIFLKEREAFRKIADNFGEDAKYYAFLLSKNFLMDTQKDIYALISGYDGIQKGAIYNILNRTMLGVKK*	hallmark_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0027	shell	direct	high	1757	0.999	GCA_001544235.1_01011
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	137110	138597	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	21207	22694	GCA_001544235_1_3_147	GCA_001544235_1_3_147	-	231011	.	PDB:5A20_A	Portal-Protein	MFQNNLSLKRYKRVRTKYSTQINEEVFDPNDFITEMKPFFDDRERKYKAYTSEQNEIDRRPKPNTEIIKVNNKLHAGLYNTIIDQAADHFTGIPIKWDYDITEQRKSILQKMGSKVKDLFSGNVRNETKTPEEFDRLTELVNDMRFAMLDSDTARFQGACGVAFRLLEPVETVEGWQLWASNIEPWKAEKYENADIFIREKYDTHQKKFFEEMKVITKKRICIYSRYVESNLVSASGTFKLIEEVENPLETFYLSEFKNNTNRYCDFEVAEELSDAFDRSLSDQQNEVEQFKLAYMAISGSRLDEKEAQRMMEQLGIINLPDPQAKVGYVTKDINKDFNEYHLDKLKKLYYTVTKSIDFNDEVFKSNSSGEARKWQIIALEAKTNTKEQYFKEGLKEAAETMSAFIKFRDKLDVDVSKIVFTFSRSLPTDIGYLADALPKLSPFVSKRTIINQIPFVKDPDYEMDLMNLEQGQDYPSGEYDELGGAGNDEEENNG*	hallmark_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0028	shell	direct	high	1487	0.999	GCA_001544235.1_01012
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	138609	139877	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	22706	23974	GCA_001544235_1_3_148	GCA_001544235_1_3_148	-	231011	.	PFAM:PF17288.1	Terminase_3C	MSKKLSEFLPKAFHTTWRIALNSNILHVVEKGGRGSGKSSGIAHIIVQLIMRYPVNAVAIRYVDNTIELSIFEQIKWAIEEQGVSKYFKVNKSPMKITYKPRGNYIVFRGAQNPERIKSLKDSRFPFAIAWIEELAEFKTEDDVKTITNSLLRGELADGLFYKFFYSYNPPKRRQSWVNKKYESSFQPENTFVHHSTYKDNPFIAQAFIEEVNATRAKNPKRAEWEYDGKAIGSGVVPFDNLRVIKGCITDEMAANFDNIRNGLDFGYATDPLAFVRWHYDKKKNGIYAIDEIYGVKISNREFANKAKSKGYISDRIAADSAEPKSIAELNSEHGMPRVFGVKKGPDSVEYGEEWLGDLDFICIDPLRTPNIAKEFENIDYQTDKDGNPKPRLEDKDNHTIDATRYAFSEDMDKNNVRFIQY*	hallmark_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0029	shell	direct	high	1268	0.999	GCA_001544235.1_01013
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	139870	140673	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	23967	24770	GCA_001544235_1_3_149	GCA_001544235_1_3_149	-	231011	.	PFAM:PF06056.11	Small-Terminase	MARKRDPRRDKAKKIWLESNGDKQLKEIASELNVSDSQIRKWKSIDKWSAELKGNVTNAKGNVTNRGGAPFGNQNAVGNKGNSRASPPLGNKNAIKTGEYEIIFADMLSDEEKDIYSNLNDDPFFILNDEIRLLKVRQFRMMKRIKEAEKGLNDEEVERLQQLRKIKTPIEKDGRKLEIKREVMQDVQVTRKTFRKLDDILAIEDALTRISNQLTKAVKQQNALLANDAKLQLLKVQTEKAKASLGATSGDMDMPVFIDDISGDGYE*	hallmark_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0030	shell	direct	high	803	0.999	GCA_001544235.1_01014
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	140942	141859	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	25039	25956	GCA_001544235_1_3_150	GCA_001544235_1_3_150	+	231011	.	pfam14350	Beta protein. This family includes the beta protein from Bacteriophage T4. Beta protein prevents the gop protein from killing the bacterial host cell.	MYYSTIRSKEGELRALEKLYETGNNLDNFIPNIIVSDGSEEILNLINRKFPLFSLLDIRELDADNIEALEELLKKQEYSNHAIVYPIDILLEPMDNEIICEYVRIPKNSINRFLLQWLVSNKNLLPKNIFIDFEDIDDKISSQLIEIVIDLIDSLPEIDFIILSGAVPSTIPVKSTENYRLERYEKELFNHINDSTMSNSYYGDYTTISPIPISTDGPIIPIVQLKYTLENYYWFVRNGQRRGNYDFVSVCKEIAHNVPSFNPEYCWGDEYIQSVIDADVNKGNPSVWVSVCVNRHIQMCIDEFS*	mmseqs_cdd	nonviral_gene	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0031	shell	direct	high	917	0.999	GCA_001544235.1_01015
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	141897	142493	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	25994	26590	GCA_001544235_1_3_151	GCA_001544235_1_3_151	-	231011	.	NF033832	sce7726 family protein. This family of uncharacterized proteins is named for founding member sce7726 from Sorangium cellulosum, from the Deltaproteobacteria. It belongs a gene pair found sporadically in genera as diverse as Enterococcus, Lactobacillus, Staphylococcus, Streptococcus, Acinetobacter, and Klebsiella, or in phage from those lineages. The partner in each gene pair is a member of the sce7725 family.	MFGGDKVRLDDKDIRRVIIERLQSYKNCQVYEEVTVPSGKARADLVAINGHVTAYEIKSDFDSLKRLSSQITEYDLNFERNYVVVGEKYVESVAYIVPKYWGIILVSGEELNALKIRFIRKARLNPNISFSNFMSLLSSNQIKFLAKQLSVFTKEYSKTEIQKMFKQDLVEKIDSTISMTAKNNLKKRIRENLKKEAF*	mmseqs_cdd	nonviral_gene	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0032	shell	direct	moderate	579	0.97	GCA_001544235.1_01016
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	142619	142852	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	26716	26949	GCA_001544235_1_3_152	GCA_001544235_1_3_152	-	231011	.	.	hypothetical protein	MKSYWYVSLTHKYPQPNRSTGSMRVVMSVQIKKNASIVEMTREATPKEIDDCKLVYCGHGYFDEKNIQDNIKRNMRN*	.	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0033	shell	direct	high	233	0.996	GCA_001544235.1_01017
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	143370	143462	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	27467	27559	GCA_001544235_1_3_153	GCA_001544235_1_3_153	-	231011	.	.	hypothetical protein	MGYSLTGRAAVSKTVGIGSSPIVPVGSIAT*	.	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0034	.	unmatched_CDS	none	0	0	.
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	143846	144262	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	27943	28359	GCA_001544235_1_3_154	GCA_001544235_1_3_154	-	231011	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MILLLKEVDFRQTKANARNVLKSFRRLERIAGRSLIDLKSPIITDMPKSQSHGNKAEDALVQLADAEAERDAILSALMALSLTSRQILHYSFCVQDHYSNYKIAREVGYSERSIQRMKSEALIEFAEAYRNGKLIAYK*	mmseqs_cdd	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0035	persistent	direct	high	416	0.998	GCA_001544235.1_01019
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	145169	145594	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	29266	29691	GCA_001544235_1_3_155	GCA_001544235_1_3_155	-	231011	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MRIILPIEPKPQSRPRFARRGNYVQTYEDSAMRAYKQKVKAYLRKAKPELIEKGAIFAHVTFYVPAPKYLLSSKKKRLEVELERKYCDKKSDLDNYFKAVTDAAEGILYKNDGQIAVMVCQKLYSMRPRTELEITSLEEQV*	common_virus_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0036	persistent	direct	high	425	0.998	GCA_001544235.1_01020
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	145612	145911	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	29709	30008	GCA_001544235_1_3_156	GCA_001544235_1_3_156	-	231011	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MNELVKLVEEWAKEKRLDKAEPEKQMLKVIEEVGEVGAALARNNENDLRDGIGDVVVTLIILAMQKNMDLYECLNQAYSEIKNRQGEMVNGVFVKEADL*	phrogs_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0037	persistent	direct	high	299	0.997	GCA_001544235.1_01021
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	145912	146214	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	30009	30311	GCA_001544235_1_3_157	GCA_001544235_1_3_157	-	231011	.	PFAM:PF17399.1	replication-initiation-protein	MIEMRVLDYRITSDDRQVIVNKARRNEHGELTILTDKDGTEKESLALIGYYGNLSKALVAIERDYVLSSGKTIQTVKEYKKELESIHSKLKRELDFGEEF*	phrogs_hmm	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0038	shell	direct	high	302	0.997	GCA_001544235.1_01022
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	146218	147219	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	30315	31316	GCA_001544235_1_3_158	GCA_001544235_1_3_158	-	231011	.	PDB:2ZC2_B	DnaD-like-replication-protein	MARPYKQGVDYYSLDVDFLKDIKYRKIRKSCGPQTCEILLCLLSYIYGDMGYFLRWDEDSAFLVADDVGAKEGLVEEVVNKAVQVGFFDHDKYQKYKILTSNGIQKRYKLMTSKRKEVVLQEEYLIIDGNNSLPTVVNDVNNSPSTVVNGVNNTQREKERESKVNKSKVNKKETESSINPSLPETSVEKAFFEEPLGEEKLTELIRYYSQNVSPATPVNITDLQYDLSDFDGDLELLKEAVNICARNNERRYSYFAGILKNWRANGVKTYADYLNNERERADKKTQNKQYQNKPVRQEKVPEWMNQANGEEEKLSPEEQAEFERQMQELLGGE*	rep_hall_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0039	shell	direct	high	1001	0.999	GCA_001544235.1_01023
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	147256	148149	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	31353	32246	GCA_001544235_1_3_159	GCA_001544235_1_3_159	-	231011	.	PFAM:PF03837.13	RecT-protein	MATNETLKNQLSQQNQKQVPANQLGLKGLMNTPTMKRKFEEVLHENANAFMSNVMTLVSNDSYLAESEPMSILSGALTAATLNLGLDKNLGYAYLVPFNTKNKQTGKWERKAQFILGYKGYIQLAQRSGKYKALNVIEVYEGELLSWNRLTEEFEFDPNGRQSDDVIGYVGYFELLNGFKKTVYWTKQEIEAHRIANSKDKEKTKLSGVWATDYNAMARKTVLRNMLSKWGILSIEMQEATTSDEKVQQMQEDGNIISETEVEENTTMKTAEVINEADSDSLNQTDLFDTKNPPLDK*	common_virus_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0040	shell	direct	high	893	0.999	GCA_001544235.1_01024
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	148149	149093	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	32246	33190	GCA_001544235_1_3_160	GCA_001544235_1_3_160	-	231011	.	PDB:3SZ4_A	Exonuclease	MIQSTLSMSHQEWLEDRRKGIGGSDVATILGLNQYKSAYQLWLEKTGQVELKDTESEPAYWGNVLEEVVAKEFQERTGKKVRRRNQVFEHSLHPFLRANIDREVVRENAILECKTANQFLAKEWAGDEVPLSYLCQVQHYMNVLNKDYCYIAVLIGGQKFIWKRVERDQELIDVLTEQLVDFWENNVIKGVEPIIDGSKATADFLKDKYSDIEETQTTLPASFDELLDQKNEMKKTKKELDVAIRKIENEIKSELGKRNASIGITKKHIVEWKEIPTKRLNSKKFAEKYPQIAEDEEIYMVTTPRRLIEKEIKQ*	common_virus_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0041	shell	direct	high	944	0.999	GCA_001544235.1_01025
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	149090	149191	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	33187	33288	GCA_001544235_1_3_161	GCA_001544235_1_3_161	-	231011	.	.	hypothetical protein	MPEFDSLGARQEPPEEKEVLELTWEYDEEEDER*	.	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0042	shell	direct	high	101	0.99	GCA_001544235.1_01026
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	149191	149418	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	33288	33515	GCA_001544235_1_3_162	GCA_001544235_1_3_162	-	231011	.	.	hypothetical protein	MIEVRGLGNDIYELMLANAQNNIIQSVRTSASYGNTSCVVSSKGATKPFLDQLQMQGVDYIELEDEKIKLFWEGL*	.	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0043	shell	direct	high	227	0.996	GCA_001544235.1_01027
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	149418	149741	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	33515	33838	GCA_001544235_1_3_163	GCA_001544235_1_3_163	-	231011	.	.	hypothetical protein	MNDKIQNLLMELVKECRKGKVAIVLSTVDSEMMEASSVLLAGSLPEQAIAFSELFEKFKEEALAHDCDCPQCKQIKESFIGAESSSTKQNNEEKLDILLKDFLRGEL*	.	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0044	shell	direct	high	323	0.997	GCA_001544235.1_01028
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	149785	149970	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	33882	34067	GCA_001544235_1_3_164	GCA_001544235_1_3_164	-	231011	.	.	hypothetical protein	MYVAIGEASRETYVIGETQAEVMRKLFEEYPYVSADKNVYPERLSIVQKEPRTSANEQGKY*	.	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0045	shell	direct	high	185	0.995	GCA_001544235.1_01029
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	149961	150155	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	34058	34252	GCA_001544235_1_3_165	GCA_001544235_1_3_165	-	231011	.	.	hypothetical protein	MKAIRETRLVGAFLLMIVLGVLLKSHFSMPILATLSAPFFIHWFFNWDEAKYQYSKKGGDKKCM*	.	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0046	shell	direct	high	194	0.995	GCA_001544235.1_01030
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	150208	150390	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	34305	34487	GCA_001544235_1_3_166	GCA_001544235_1_3_166	+	231011	.	2K7I_A	UPF0339 protein Atu0232	MFFVIKRASDKKYYFLIKTEENEIIASSKTYYYKSSVLEIIESIKNDMNPKAIIVDTTFN*	hhsuite_tools	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0047	shell	direct	high	182	0.995	GCA_001544235.1_01031
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	150430	150951	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	34527	35048	GCA_001544235_1_3_167	GCA_001544235_1_3_167	-	231011	.	pfam10552	ORF6C domain. This domain was identified by Iyer and colleagues.	MNRDGFTLLAMGFTGQKALKFKLKYIEAFNQMEELLKTQSNLPINNTELLLEAALKHERGLTLVNQRLDKLETETTINRSQQRKIQGLVSSTVIKVLGGKKTVAYRDSSIKQSAFSNCYKQLKALFDVASYVDIPKVRYKEALTLIPKWKPDLELQARIDMANGNGDMFKEVS*	mmseqs_cdd	nonviral_gene	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0048	shell	direct	high	521	0.998	GCA_001544235.1_01032
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	151059	151151	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	35156	35248	GCA_001544235_1_3_168	GCA_001544235_1_3_168	-	231011	.	.	hypothetical protein	MDNLVIMKNQQAVTTSLQVEQRLIKIIVMF*	.	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0049	shell	direct	moderate	92	0.989	GCA_001544235.1_01033
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	151190	151501	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	35287	35598	GCA_001544235_1_3_169	GCA_001544235_1_3_169	-	231011	.	PFAM:PF12964.6	HTH-DNA-binding-protein	MENFLDTSSKNFLYNIIEKILRKMFEQVINEASQGLNERAEYLDIKQLSSRYSMSVPEVEQNFVKDKRMQIIEKRKPGTSKGKRYWPAKEAIKICNDIMNHWD*	phrogs_hmm	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0050	persistent	direct	high	311	0.997	GCA_001544235.1_01034
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	151513	151704	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	35610	35801	GCA_001544235_1_3_170	GCA_001544235_1_3_170	-	231011	.	PFAM:PF10078.8	DNA-binding-protein	MPDTSVSRQKIRDYFESKGISLVSVATYFDIPRQDLIDYLNGKNKSKKAHETLLAIIDFYKIR*	phrogs_hmm	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0051	shell	direct	high	191	0.995	GCA_001544235.1_01035
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	151995	152339	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	36092	36436	GCA_001544235_1_3_171	GCA_001544235_1_3_171	+	231011	.	PDB:1PRA_A	Repressor-protein	MTTFERIKNLAKQKDKSLQQVARELKYGENYFYSLNAGKQPTAEKLQEIANYFNVSVDYLLGRTDNPNSDNLEEDEIATFFRVNTEDLTESEKDQLREELKEYLEFMKSRLKNK*	common_virus_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0052	shell	direct	high	344	0.997	GCA_001544235.1_01036
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	152352	152990	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	36449	37087	GCA_001544235_1_3_172	GCA_001544235_1_3_172	+	231011	.	PDB:3DTE_A	IrrE-protein	MYLDYDTYFEYHDQTYIIIEKVANYYGIELKELRWKHYKDYMIDVENVDIIPYSFGDVSRKIFSGNIIRFHDKCGISYNSTMVKGRQNFSILHESAHYFFDMNKECKSQSFSDLITGKGYTSEDEPKEIRANIFASLALINNEALKECLQKQMSFRQICEEFEMSAAALYVRLYDFLTKIFLLNTCLARSAINQYRYNYDSTKLISYVKMVL*	common_virus_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0053	shell	direct	high	638	0.998	GCA_001544235.1_01037
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	153108	153872	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	37205	37969	GCA_001544235_1_3_173	GCA_001544235_1_3_173	+	231011	.	PFAM:PF08139.11	endolysin;-lysM-motif	MKKIVTLSLSLLLLTACSNETKQVSKQNSSSTTITSEKKDISDSKKINSSSSESSTIHYSSTQTDETTQMELGGSTYSQILETYTQKLTTTTPILIEELRNEGEPIKGNVSALAEVLNSKIGKLADISNAGISEMASIQLSNKDDYSLYESWANKLTDVYTAEANKLTDLYTELAAVNTEISTSQQPLPSTQSSSAIEQPQSSEVEQPVYDKVRSGEGARQVAERNGLTLEQLFALNPGIDTSVFYPGQPLRIK*	phrogs_hmm	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0054	shell	direct	high	764	0.999	GCA_001544235.1_01038
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	153887	154216	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	37984	38313	GCA_001544235_1_3_174	GCA_001544235_1_3_174	+	231011	.	.	hypothetical protein	MKKIKYFIYTLLLLIVFTACGTKEVKPDYTSKEAETALNNGEDLTGKTVQFTVDKYVPDGSLGYTIQTGDHLNFVSSKNPDVRTGDKVIAKIKKVENLMGSWIITFDKK*	.	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0055	shell	direct	high	329	0.997	GCA_001544235.1_01039
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	154291	155439	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	38388	39536	GCA_001544235_1_3_175	GCA_001544235_1_3_175	+	231011	.	PDB:1Z19_B	Integrase	MAKLNWSKKYKYVFSYSNKKGTFWGYRYPYYNSLKHRKEASKRGFESERAANKALLKIQYDLETQNTSFIENKQLTIDEWIKVWIPYAQDNWSVSTKQNIESAIKFHISPLIGNQKLSSLNKITYKREFIDKLRQENKYTESTIQTWHKIVMRMINAAVHNQIIPSNTLTGFKFDLSNNVRSFSKKELQRFIAVLENEDIQTQVIFLTLLKSGMRKGELMGLRWSDIDLNEKYFDINSTRGDYGENKPKTKTSIRKVYFDNSLLTLIKKYKNHEKERLFREGIILSDKDYFILSSRNLPIKQSRITYMFRLLCEKAEVQNITVHGLRHTHATFLIEAGANIKYVSTRLGHKNINITLDVYSDVLKEEEKETADMMDKLIENL*	common_virus_hmm	common_virus	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0056	persistent	direct	high	1148	0.999	GCA_001544235.1_01040
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	155467	155883	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	39564	39980	GCA_001544235_1_3_176	GCA_001544235_1_3_176	-	231011	.	.	hypothetical protein	METLASLTIVCFMTMLPTLAIHRWQETLKIEQFLATVEKQLRFAQQQAIVLEETQEVWFFEEQQSFSFPDKLNQPARRTSLAVPEKMTVSGPSKLSFLHSSGNNGRLVKYIFTWTEKKQQLILQFQMGSGRAFIYQWF*	.	hypothetical_protein	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0057	persistent	direct	high	416	0.998	GCA_001544235.1_01041
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	155907	156182	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	40004	40279	GCA_001544235_1_3_177	GCA_001544235_1_3_177	-	231011	.	PFAM:PF07379.10	pilin	MKKKQKYAGFTLLEMLIVLLIISVLILLFVPNLAKHKETVDKKGNEAIVKIVESQIELYTLEKNKTPSLNELVNEGYITKEQLDKYTAEKQ*	phrogs_hmm	nonviral_gene	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0058	persistent	direct	high	275	0.996	GCA_001544235.1_01042
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	CDS	156182	157228	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	40279	41325	GCA_001544235_1_3_178	GCA_001544235_1_3_178	-	231011	.	3JC9_Cb	PilA, PilC, PilN, PilO, PilM	MGLLQKKRIFKPSNKLTKKQQQLFLKLLADLLANGFNIQESFSFMKKSNTLPQRSITFLVEGFSSGIALQALVEELGFSTMVSAQLSFATAHGDLVGTLQAISEHFFQTEKYRQQFYKIISYPLLLIAFLILVIVGIRQFLLPQLMENDANSYSKNIGILLIVYSPYILVTLVFVLSFSFFILNRYLKHQSAIQRAFVYLKLPIIRGLYREYVSAFFALEWGKLLAQGLEMKEVIDLMRHTTNYPLMKELAGAISEGLLVGETLHRQLAAYPFFTKALGLMIQQGEVKGKLGKELMVYSNVCFQGFFKKIERVITLVQPLIFIIIACLIIGVYGAMLLPIYGNMEGVL*	hhsuite_tools	nonviral_gene	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_CDS_0059	persistent	direct	high	1046	0.999	GCA_001544235.1_01043
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	30466	30846	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	1	381	GCA_001544235_1_8_28	GCA_001544235_1_8_28	+	144783	.	3HSA_D	pleckstrin homology domain	MGLFDGLLGNATQNNNETAEKELRDVLIPNEKVDMAFTLVRDLIVFTDKRLILVDKQGITGKKVDYKSIPYKSISRFSVETSGHFDLDAELKIWISSAELPSVSLQFRKDKDIVAIQQALAAAVLS*	hhsuite_tools	nonviral_gene	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0001	persistent	direct	high	380	0.997	GCA_001544235.1_01865
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	31217	31798	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	752	1333	GCA_001544235_1_8_29	GCA_001544235_1_8_29	+	144783	.	PFAM:PF08139.11	endolysin;-lysM-motif	MKKSLSLVFALLLLTACTNENTKTENTKGSSTTVTSTVKESSNNSINEKNILSTNTTTTSTADRKSSQTEEEQSHTEDPASLSSFVGGWGIPQSGNFFFINPDGKMSGSGQPNGVIQSPNFLSNADGSITMNFIINNTSLSFTKNLDGTLSTENQIYSYLGNITLEQWLELKNKGQMSSEQQTGILEASSQTP*	phrogs_hmm	nonviral_gene	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0002	cloud	direct	high	581	0.998	GCA_001544235.1_01866
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	32164	33666	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	1699	3201	GCA_001544235_1_8_30	GCA_001544235_1_8_30	+	144783	.	PF14264.6	Glucosyl transferase GtrII	MKYFFKENKGLAIYSFLMVFATYGIKLFNNTYAIDTMHLMTNYRGYLKHWVSIGRPGLVALKLLTYNYVNVYFLNLLAIIFFAIATILLCYYVDLSTKQIYNKKYLYVIPSIFPTSQLFSEQFYFVLQNFEFSLGICLVILSLIAIYHIPNKIFKLFGFLLLTFTLTMYQSFFVFACTLILFKILMALYFAQLNDLKISFKDYAFKIGHFILLAISSLVLSQLMAMLAKKVLNVESSYLDNMILWGKRPLIDSINDIKDYAKELFFPPVGDTFFTPLFLICVLLLVIVLINMSYLKRKNVFFIFITLLGILITPLMFTVLGGKRPAIRGEVPNFPAVLALLLIFIMIYWGYNFVLKHLLVGIVIIFTFIQVRETTNLEYSEYLTAEEDLRTAEMITNNIYSMEIENPESYKLLMYGNRSPRNVSNIKGETNGVSLFEFMPNSVHTSLNTLVYMKTFGLNFNDPTPEDFEKHKALQAEMNVWPSKDSIRVVDDCIIVNLSK*	hhsuite_tools	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0003	cloud	direct	high	1502	0.999	GCA_001544235.1_01867
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	33730	34995	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	3265	4530	GCA_001544235_1_8_31	GCA_001544235_1_8_31	-	144783	.	PDB:4F88_1	Lysin	MADTWLSPLAVSYQATQEWDEPDYLSGGQAGIHGGIDLAPKAGTNPPVYSAKSGTVEEVVPNHPIGGNYIVIRHMDNYWTYYGHLATINVSVGQQVTNQTVLGLCGATGGATGIHLHFEVWRGGKWQRINPREVINLDGSGRDSSNNGGNGGIYTGGALLNAGKSISESNIRLIISAGKKYNIKPSFMIAQMFIESHWGDPSISIVGSKDNNWAGISEPFSVPADLGINMSRGSARPVGEGGYYIHFATMNDFFKAYAFVLSKRNGLYNVEGANSIEEYCKGLFRIGGANSDYAATGYQNYFNMLIPTYNSINKQNPGKLAQIDASTEEITNNGGLTTMQCLYERPINPNTGALDINGSATTMMFCNGVNTRRVYHNDEVNIVKELYRKNNGKEIPVYYKKDWPKTSPWYIRLEAMFPVVK*	common_virus_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0004	cloud	direct	high	1265	0.999	GCA_001544235.1_01868
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	35084	35464	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	4619	4999	GCA_001544235_1_8_32	GCA_001544235_1_8_32	-	144783	.	PFAM:PF05263.10	transcriptional-regulator	MKSEIKKHIRQLLCDYKKIEKQLKKYEDALVYPQSSFSLYFEEKSNEKISLNQIVFHKFFLNTVEEVLSDATSDVRDIFISKYKNGYPRKKNEIVAYETYLSLSTIKRRDSEFLEELARQLGWLEV*	phrogs_hmm	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0005	cloud	direct	high	380	0.997	GCA_001544235.1_01869
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	35477	36736	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	5012	6271	GCA_001544235_1_8_33	GCA_001544235_1_8_33	-	144783	.	CDD:cd06415	Cpl-1-lysin	MKKKILVGALIALFFMPLNVFAAKGDQGVDWAVYQGEQGRFGYAHDKFAIAQIGGYNASGIYEQYTYKTQVASAIAQGKRAHTYIWYDTWGNMDIAKTTMDYFLLRIQTPKNSIVALDFEHGASSDVNANTETILYGMRRIKQAGYTPMYYSYKPFTLQYVDYQRIIKEFPNSLWIAAYPSYEVTPEPLYAYFPSMEGIGIWQFTSTYIAGGLDGNVDLTGITDSGYTDNNKPETDTPATDAGEEIEKTPNSDVKVGDTVKVKFNVDAWATGEAIPDWVKGNNYKVQEVTGSRVLLEGILSWISKGDIELLPDATIVPDKQPESIHVVQYGETLSSIAYQYGTDYQTLASLNGLANPNLIYPGQTLKVNRSVVSNVYTVQYGDNLSSIASKLGTTYQALAQRNRLTNLNLIYPGQTLIY*	common_virus_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0006	persistent	direct	high	1259	0.999	GCA_001544235.1_01870
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	36741	36944	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	6276	6479	GCA_001544235_1_8_34	GCA_001544235_1_8_34	-	144783	.	PFAM:PF16938.4	phage-holin-Dp-1	MILPDKYYKIIKWGVLTVLPAISVLVATLGKGYGWQQTDMAVLTINAIATFLGVVTGVSAYNLKDKE*	common_virus_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0007	shell	direct	high	203	0.995	GCA_001544235.1_01871
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	36941	37168	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	6476	6703	GCA_001544235_1_8_35	GCA_001544235_1_8_35	-	144783	.	.	hypothetical protein	MILSNEIVVAVIGLVGSTFGAFIGVVASANLTAYRIEQLEKKVEKHNGVIERTFKLEGRMQEAEHDIIELKGAKK*	.	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0008	cloud	direct	moderate	222	0.974	GCA_001544235.1_01872
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	37242	39005	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	6777	8540	GCA_001544235_1_8_36	GCA_001544235_1_8_36	-	144783	.	PDB:5EFV_A	Minor-structural-protein	MAIEQIKETDTLNQGRIKINAILDQSNTAVEKINDYQSQLTEGINDAKKIADDAGKEAVQIAEQAGNQANETANQALTNSQTAINTSNQAVSTANNNKQEFDALRNDFEKLVGEAGDSNPEIVQARTDTQGVTQSTLATRLQVDFNDRMTKSEGVSLLSGTTNVKIPMDFTGKTAGNTATNANQYFTDVTAKVLKKPKDTWNEISQSDYNKLVSRDDSGVSSGSTQNGVIPQQLGVFNALEAAKKLIPQNFEGLSQEEAVVLLKDSFVAFTISERVKATSPNNKTIKVSTYIESTDSWTTQIQENAGEYKDLSVQVTDKNFITSDGLIYLISYTDPSNGVTTANLDVDYSAIQLEISINAQDVLAKSGFVREEQLKEHTESQDNPHKVTASQVGLGNVKNYGFATDSEASAGTSTTKYMSPKNVADAIKGQAVTQTGDQEIAGTKDFMNPPKIAGQTVISEKVIAFSAPNTVSVSGTGVKVIPISQKVITNNEFFELSANKIKVLKDGIISVVTSYTTNVPAGWCNIELTKNNAVMNRSNQGTGGLHAAGLTDVFDVKAGDTIAFQSNSNQSSYTVLYLRGFLRYLT*	hallmark_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0009	cloud	direct	high	1763	0.999	GCA_001544235.1_01873
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	39016	39189	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	8551	8724	GCA_001544235_1_8_37	GCA_001544235_1_8_37	-	144783	.	.	hypothetical protein	MRLTVKLISKQEEFIINDESGKTLDDYFAELIDNSSPFIKIGNRILQKATIEYINAE*	.	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0010	cloud	direct	high	173	0.994	GCA_001544235.1_01874
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	39190	41205	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	8725	10740	GCA_001544235_1_8_38	GCA_001544235_1_8_38	-	144783	.	PDB:3GS9_A	tail-protein	MLMAMDLKREYTAVLDNAYQVSYEKIENQIGNLEFSMPLDDPKNEFLQEMLWVELTDNENEYIGLYRVMPSTVRKDASNNSITYTANEALCTLLDTVLFGYHELVNRKTVDVINYLLNKQRTKHWVLKKCEFTRYFSYAWENENGLADALFSIPQAFDEDYMWQWNTKVYPFELSLVKPPKEPIARIQEGYNMQGFEIERDPNNLVNRVYPLGAGEGVNQINIKSVNKNIPYVEDAKSIKEHGLVEYVWVDQRFTVPQALKDNAINMLKKWAQPKISWDVTAADLLKLTDEPLSIDKLRQGTVIMINTDDFGSINLRIKKETKQDVFGAPQDIQLELGNLSDDFTTTMSDLKRKQEINETYSQGATNILNYSYQDNCEKAYPAEIEFFLDDDVFHVNTVELTFKTKRYRGYTKAVKGGGATVKSTSAGGASTQTSSAGGGSVVSSSAGGGGSTTSGSGGGSYQGGSTNTDGGSAQTSSANGSHDHLMFNVIQGPPQTLPKITLRAGGGGEIYTEARGGTFRTASAADNHTHTVNVPSHSHRFNIDIPAHSHVVSIPNHTHSISVPSHSHQVRIPAHTHQITLPDHSHPLEWGIYEAPSSATSVDIVVDGTTIPVHDTSQQRLNIVNYLRKTSGGKISRGNHTIKIIPNKLARIEAQVICRVFIQSQLGGQF*	common_virus_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0011	cloud	direct	high	2015	1.0	GCA_001544235.1_01875
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	41222	42151	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	10757	11686	GCA_001544235_1_8_39	GCA_001544235_1_8_39	-	144783	.	PDB:4DIV_S	Receptor-binding-protein	MLYNFIDVNEQQTKASLPSEAMNFNGSFLEDLVPGYRTLSVVGRELAPTEIQSYQLGIRDGMRHVYARIPERELTVKFKVEANSNEAFRDSFNRLNVALFTEKDVQIWFNDEPEMLWSGSKSDIDAVPEGLNRVVGTFTILLNNPYKYTRSDATSVMWGSPTITFQANYLMGNTGSGAVDLPIVIEGGAYWGSTMITFQNRSYLMGDNGQEVKPIEIYPTVEGLKVKPIITIEGTGRGVWIKTRSDTIDIGDFDKSEIVIDTEQFNITKNGKPMIRPMNDFYIYPNEPLYIQAKDSTFNLTIRYPNRFL*	hallmark_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0012	cloud	direct	high	929	0.999	GCA_001544235.1_01876
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	42152	45559	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	11687	15094	GCA_001544235_1_8_40	GCA_001544235_1_8_40	-	144783	.	Uniprot:T2PM72_GARVA	tail-tape-measure-protein-	MESYSVEAILTATDRTFSSTMSSAERSMAGVNKQSGELGDGLDKSTTKGNQLGKSILSIGAGVGAVKLVSTAVNMVKDSVEGAINRFDTLNKYPVVMKALGYSTEDVDRSMNKLSDGIDGLPTSLDEIVASTQQLSISTGSLSKGTDTAIALNDAFLASGASTADATRGMQQYIQMLGKGEVDMQSWRTLQETMPIAMDKVAKSFKEQGVNSVNQLYDALKEGDITFNEFNNRLIELDKGVGGFADLAKKNSKGIKTSWANIKTATVKGVTTVIKSFDELSKAVTGKNIAENLDSLKNVVNITFKAIDAAIQSTIPLMKLFGKAITSIGTALTPLLPTIASFAATFTALKVIQQVTGYIKQSELAIKAYTTAISLYNGISKLATLSTTALGRAWMLNLAADKANSAAIAIKTGLLVAQNTIVGVLTGTISLATVATTVFSTAMKLLLGPIGWVTAAIGGLVAVGVNLWKWLNKETESTKAVKKEQESLMKTTDDLIKKNQEHAQSRKDEAIELDNTKEKFQSMISEMEMLSAKEKLSNSEKKRMVEIVEELNGKMTGLNLVYDDQKNILSEMPGTIQQQVDAYNALDEASQAQENINQMLKERNDNEAKLMEINAAREKWNQTLKESGGNTKEARENIEKLGEQEQVLKGVQQELTNEIINTANAHEQSMQRASQAVENGVLNQTVSYNALSGKTKETMDAMRSEYSSLEEKVGSAFDVIEQKQAISVDQMAANLQKNQEAVAQWGQNISTLAERHVDQGLLEQLRKMGPEGAAQAAELVNASDEQLQRLNDVYRNTGETSMNAMKEGYQLGKNGLNEEIQALIPTQKETLMTQIKNTDFNSVGLSVTDDFKAGIENGRTAVEEMTKGIVPKVGEDMKGEVQKADFRGIGKSIPQGLEKGVDDGKGVPVKTSNQMIDDIVSGARKGLDSHSPSRVFHSIGEDVDSGLSNGIEQNAMNPVRAVEAIVDKIISAMDKLPSEMNSIGANAIDGLTNGINANANSALAAARGVADQIVSTMKSAMDIHSPSRVMRDEVGKMIPAGVAVGIDKYSNFVEKSMQRLSKKVAMPALDNLNSNLSFSGGSQSLAFAGDVSSKFTVEVPVIFDSSEVARVIAKPMSKELQNQQDKKNVSLGRRR*	hallmark_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0013	cloud	direct	high	3407	1.0	GCA_001544235.1_01877
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	45575	45832	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	15110	15367	GCA_001544235_1_8_41	GCA_001544235_1_8_41	-	144783	.	PFAM:PF12363.7	tail-assembly-chaperone	MTLYEYEVRLLAFQLKRLDHERDLYLQAWLNNQIKATKGKKSEPYFKEFNKFFNYEEQEKLILGKSLIDEKIDIGAIDLLRKANK*	phrogs_hmm	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0014	cloud	direct	high	257	0.996	GCA_001544235.1_01878
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	45925	46275	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	15460	15810	GCA_001544235_1_8_42	GCA_001544235_1_8_42	-	144783	.	PFAM:PF12363.7	tail-assembly-chaperone-protein	MQIEIKGKKYNCIFGVKFIRELDKQHGVVRNDVNLGMGLTTLLPQLVSGNIVVLSDVLYTATITEKSRPSKDEVDEFVETVDDIEALFDETLKYLEESNAGKLTVRNFKKALMENK*	hallmark_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0015	cloud	direct	high	350	0.997	GCA_001544235.1_01879
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	46330	46788	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	15865	16323	GCA_001544235_1_8_43	GCA_001544235_1_8_43	-	144783	.	PFAM:PF16323.4	major-tail-protein	MVDTFKIYKGQTEVVSGTSPLTITGMEPNTSVSAGEYQVTRVVNGKESERVDIPAFKTLSIAVTGLDFSPKTSTADAGTAGSRQITATVLPENATTKKVTYDISPVTEGLAVSETGNITWTESVPAGVYTTTGTTEDGKKTAQHTLTLNNQA*	phrogs_hmm	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0016	cloud	direct	high	458	0.998	GCA_001544235.1_01880
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	46804	47397	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	16339	16932	GCA_001544235_1_8_44	GCA_001544235_1_8_44	-	144783	.	PDB:5A21_H	major-tail-protein	MANEAKVAAKGIDIILLFRLLKKSKEEAAWKLAFQTEHENTKTKDSDSVATKDGPIRIPGSLEIDFSATSILSVGDPYVDQLEEALDNDDIIEIWEINKAEKGTGDNVDKYKATYYQGYVTSFGKSPNAEDTVEVSLEFGINGKGAKGFATLTADQEEVVQYVFKDTTIEKDDPEKVDSPSVESVTPTFDGASTELS*	hallmark_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0017	cloud	direct	high	593	0.998	GCA_001544235.1_01881
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	47413	47802	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	16948	17337	GCA_001544235_1_8_45	GCA_001544235_1_8_45	-	144783	.	PDB:4ACV_B	Antigen-protein	MIKTRDQSIFDEVYKKCQSLGYEIYDYKPMNDVGYPFVELEDTQTLHQANKTDIKGSVTLNLSVWGLAKKRKQISDMASAIFAEALSISETEGYYWSLNIQSSGIRLVDDISTNTPLKRAMISLEFKIL*	common_virus_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0018	cloud	direct	high	389	0.997	GCA_001544235.1_01882
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	47799	48179	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	17334	17714	GCA_001544235_1_8_46	GCA_001544235_1_8_46	-	144783	.	PFAM:PF04883.11	putative-tail-component	MAISQVRINGLAGISKKLKRNAQLDDVKKVVRNNTAELTANMQAEAGKVLTGHREGKKFVKPTGATKRSIVMRLSNNGFSGHTGPGTEYAPYLIHGTRFMVKRDFFLPPLKQQKVKFRTDLERLMK*	hallmark_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0019	cloud	direct	high	380	0.997	GCA_001544235.1_01883
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	48154	48489	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	17689	18024	GCA_001544235_1_8_47	GCA_001544235_1_8_47	-	144783	.	PDB:5A21_F	head-closure-knob	MRYTDEITFVKKSSESHYDPNSGEWIEEEPFRKTTDVNVTDIGTDRSITIFGSIKEGAKVIRTQPLFVIPEFDYIEFEGKAWEVITSRVPALRNSLIIQEVIIDGNKSSKN*	hallmark_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0020	cloud	direct	high	335	0.997	GCA_001544235.1_01884
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	48486	48818	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	18021	18353	GCA_001544235_1_8_48	GCA_001544235_1_8_48	-	144783	.	CDD:cd08055	Head-Tail-Connector-Protein	MPSITDDITKLLNSPANEKLEVIERRTRERLNSLLNVSETPSKFDSIIYEVVLKRFNRIGQEGMISYSQEGLTMAFPDSDFSEYEKQINDYLNEEKEVQYKKLRGKARFV*	hallmark_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0021	cloud	direct	high	332	0.997	GCA_001544235.1_01885
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	48892	49905	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	18427	19440	GCA_001544235_1_8_49	GCA_001544235_1_8_49	-	144783	.	PFAM:PF03864.14	Major-Capsid-protein	MANIAELFSQKNVLDYVNNRQAPVLLGETLFPARKVQGLEFDVLKAGSKIPTIASVHAFDTEAEIASRVGSKTAQELAFIKRKIQLKEKDLIALRNPRTAEEQRYLEQEVYNDVYSMVSSVNARVEKMRMEVLANGKVTLDENGLDLVVDYGVPADHKDTADFSAPDTDIIGLLTEWASKLDVMPTRILTSTKVRNAILKNDGIKAFFKTSGLLPNIGSLNQMLQQFNLPTIVTYDAKYNKENAEGVLVKERYFPENKLVMFGDENPGESIFGVTPEESRLLSNGSNNYTVGNIFAMVYESNLDPVGTWTKASGTALPSFPEADNVFQATVLPDSKK*	hallmark_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0022	cloud	direct	high	1013	0.999	GCA_001544235.1_01886
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	49928	50269	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	19463	19804	GCA_001544235_1_8_50	GCA_001544235_1_8_50	-	144783	.	PDB:1TCZ_D	Head-decoration-protein	MVYVKKTQTYQDINFLKSEKFISFTKQVDETTEGVVKGVLPAGSVFPKNDATAEGITINDVDVSNGPQPVGVIVEGHVLIKRLPAEPSSEAQKAMRELKFYDANGKMLAVPTA*	hallmark_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0023	cloud	direct	high	341	0.997	GCA_001544235.1_01887
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	50282	50923	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	19817	20458	GCA_001544235_1_8_51	GCA_001544235_1_8_51	-	144783	.	PDB:6B0X_d	capsid-scaffolding-protein	MKTKKLLLPMHLQFFADNLDTGTGGTDQPAGGQEQTPPGDGGKDKGNGKTFSRDEVAKMIAAEVSKTKEAWEKELQEKQEEADKLAKMNDQEKNDHEKQKLLEKIKELESAQNLAEMSKTATKMFSDKGIQATEGLLSLVVKETAEETSENVKAVVKLIETERETIKADFEKRIGSKLPLDGNADASLSRGAQMAKQANNQNKAPENNLWATN*	hallmark_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0024	cloud	direct	high	641	0.998	GCA_001544235.1_01888
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	51053	51331	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	20588	20866	GCA_001544235_1_8_52	GCA_001544235_1_8_52	-	144783	.	PFAM:PF14083.5	nucleotide-pyrophosphohydrolase	MKARKKPVVIETVIFLGFYGKDRNFSERPKWLERAIYVDKKIEFFDVPEKLTIHTIEGPIYAIPGDYIIKGVNGELYPCKPDIFEKTYEIIE*	phrogs_hmm	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0025	cloud	direct	high	278	0.996	GCA_001544235.1_01889
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	51300	51419	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	20835	20954	GCA_001544235_1_8_53	GCA_001544235_1_8_53	-	144783	.	.	hypothetical protein	MTERRDSMNDDPYDYLDADYEEYLRKEEVNESTKETSSD*	.	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0026	cloud	direct	moderate	99	0.825	GCA_001544235.1_01890
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	51424	51693	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	20959	21228	GCA_001544235_1_8_54	GCA_001544235_1_8_54	-	144783	.	cd13946	LysW	MDNLYKCNQCHKYTPLVRKSENITKDIEHHYAECANCGYKATIMYMNTEIKLLMHEQRKTNFGTKKKGKLTEKLNRLISELRKEVEESL*	hhsuite_tools	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0027	cloud	direct	high	269	0.996	GCA_001544235.1_01891
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	51694	52632	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	21229	22167	GCA_001544235_1_8_55	GCA_001544235_1_8_55	-	144783	.	PFAM:PF06152.10	minor-capsid-protein	MSYLKDREDAWIKEQMKLDRNREKEIVKQLQNAIDAIQTEIEANWDRFSNGQKITISEARKMANKMDVKRFERKAKEYVKNKDFSPQANKELKIYNLVMRVSRLELLKSQIGLELITLFDELDKWGYSQLTEAAKEEYLRQAGILGETVQENYSSKVRKIVNASFKSSDFPSFSDNIWQNFVEMKADLEKIITQAITQGKNPRAVAKEIAKFLKPNQLNIRYKLNRLMMTEISGIQTDIQKQSYLDADIEEYDYIAEPFACEICKKVAKGSPYRVLKMKKGINAPYMHPHCKCSTVPKVSEDYDKSLKERCL*	hallmark_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0028	cloud	direct	high	938	0.999	GCA_001544235.1_01892
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	52638	54251	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	22173	23786	GCA_001544235_1_8_56	GCA_001544235_1_8_56	-	144783	.	PDB:5A20_A	Portal-Protein	MNNKLLNGSRFDKEANLVYKVPVSKLPTRIMQYSNGEKEEVVDFEHQDVFNMIVKFVRHHKEKQVPRLKELKRYSLAQNNIKFTEDKSENRADNKIANDWARFIVNFKKGVLLGNPLKYNGDKTIADKINDFSSKSNEDYHNQLMLDDLLVYGRAFEYIGRDEYGKEMLAKFSAEETFVIYDTTTNKNSVCAIHCYDLEFNDETFSYIDIYANDGYFYQHESKNQDYEQSKLIDKYQTFFDSIQVNEWINNEERLGDFETVLDNIDAYDLSQSSMANFQQDSSEAYLVIKGNPETAIGDEEGNSAVDVLNDMIKARLLILGDKKYYGDGQTGSDPDAYYLKKEYDTQGTEAYNDRLVSDMLRFTSLIDFTDENIGSNQSGIGFRFKGWGSDNDRKNKERMVKKAIMRRLRLLTYSWSLKDNLNKPTGLAEKVKSFFVSRDNDKELLFEKVNAIEILFTPNVPQSDKEIMEVIAGMVGIVSDETLCEMAAKLTGVPVQTELNRLKKENQPDTLSDEEAAKLKEKQAEFLANQSETEED*	hallmark_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0029	cloud	direct	high	1613	0.999	GCA_001544235.1_01893
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	54256	55710	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	23791	25245	GCA_001544235_1_8_57	GCA_001544235_1_8_57	-	144783	.	PDB:4IEE_A	Large-Terminase	MNKEFIPFADIGAAIDYYYDKPVAFCQDILHLDPDEWQDKVLDDLAKFPKVSVRSGQGVGKTALEAGAILWFLTCRPYAKVIATAPTMKQLYDVLWAEVAKWLNNSLIKDLLKWTKTKIYMVGDSERWFATARTATKPENMQGFHEDHMLIVVDEASGVADPIMEAILGTLSGFDNKLLMCGNPNNIEGVFYDSHNTDRDKYRTHKVSSYDSKRTNKENIQMLIDKYGENSDVARVRIYGEFPKGALDSFISLEIVEFAKDINISDSELKHVREGHIGVDVARFGDDSTIVFPRIGAKALPFEKYSKQDTMQTTGRVLKAAKRMMDDYPTIKKVFIKVDDTGVGGGVTDRLKEVISDEKLPYEVIPVNNGESSTDDYYANKGTQIWGDVKELLEQNISNSINGQGPTIELPDNANLIKELSTRKFKMTSNGKIRLESKEDMKKRNVGSPDIADALTLAFYEPFRPEPINVKKAINTFKKLGLSR*	hallmark_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0030	cloud	direct	high	1454	0.999	GCA_001544235.1_01894
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	55703	56497	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	25238	26032	GCA_001544235_1_8_58	GCA_001544235_1_8_58	-	144783	.	PFAM:PF06056.11	Small-Terminase	MDKKEQAKKYYEKGWKYKDISEKLSVPLNTLKSWRKRDKWERGGATKEVQPTNRGAPKGNQNAIGNKGNSRASPPKRNKNAVKTGEYETIFADMLSDEEKDIYSTMNDDPFFILDEEIRILKIRQYRMLKRIKDAEAGLNDEEVERLQQLRKVKEPSVIDGKMVTVKREVLKDVQVTRKTFRKLDDILAIEDALTRVSNQLIKAIKQQKELLSTDKKSLLMEAQIEKIKLETDKLSGGSSNDEADSWKQAVINAANKRAVEENE*	hallmark_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0031	cloud	direct	high	794	0.999	GCA_001544235.1_01895
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	56545	57465	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	26080	27000	GCA_001544235_1_8_59	GCA_001544235_1_8_59	-	144783	.	1S2D_A	purine trans deoxyribosylase (E.C.2.4.2.6)	MAKEKNEKKANSDKGEIKETNLKKCFFITPIGEKNSNEFKKLKAIVENVLNKVLEKYDYELIIAHEIHSMGSIGDQVFTNIIGADLVISNLSGWNANVMYETAVAHSFGKPTIMICESGTELPFDLINDRTIFFEDTIEGTGALIEELDKKIPKISEDSTADNPVTRVIRRKALEDDLKGETDNDSRILGLLLDMDKRLSMYEDSNIIEKKKINTGNIERIRAKIYYKNEGNINVIDELEGYLFEKYRDTVQIVSVTSGNRYEDRNSEVMKVIIVNSLYSPAKIFKDIEITLGKLGMVDISVKVFP*	hhsuite_tools	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0032	cloud	direct	high	920	0.999	GCA_001544235.1_01896
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	57510	57698	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	27045	27233	GCA_001544235_1_8_60	GCA_001544235_1_8_60	-	144783	.	.	hypothetical protein	METFDYEVQQALEKQKIAEENNKIIRAAKAQWISNFKAGHIKLNTVKDLKDLIEIESHLKEL*	.	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0033	shell	direct	high	188	0.995	GCA_001544235.1_01897
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	57835	58443	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	27370	27978	GCA_001544235_1_8_61	GCA_001544235_1_8_61	-	144783	.	PFAM:PF14236.5	Mom-like-DNA-modification-protein	MLKVDWATHEATKYACTHFHYSKSVPVGKLIKIGAWEDGQFIGVVIFSRGANKSIGSPYGLEQTECCELTRVALTNHKTFVSEILAKAIKFLKEFNPSMQLIVSYADTDQNHHGGIYQATNWIYTGKTDGERYFIVNGKKTHPKSIHAKYGTGSQRLEFLHKHVDPKASIYESKGKHKYLMPLNKKIRKKIIKLSKPYPKAK*	phrogs_hmm	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0034	shell	direct	high	608	0.998	GCA_001544235.1_01898
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	58430	58951	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	27965	28486	GCA_001544235_1_8_62	GCA_001544235_1_8_62	-	144783	.	CDD:cd16403	ParB-like-protein	MHIEKMKLSDLRPAEYNPRVKLNPGMAEYEKLKQSILEFGFVDPPIFNKNTGNLVGGHQRVTVAKELGLFDEIEVSVVDLPLDKEKALSIALNKISGNWDEDKLTELLNELTADNLELTGFDNEELEILIEDADIPNFEPGSIDDQGDLTKLEPKFVKCPCCGEEFDLRDVES*	common_virus_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0035	shell	direct	high	521	0.998	GCA_001544235.1_01899
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	59006	59455	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	28541	28990	GCA_001544235_1_8_63	GCA_001544235_1_8_63	-	144783	.	.	hypothetical protein	METNNTFSNLLKNFDYPRIEPSMKYAEKLETGSNWLGDINREKKQLQELQKLANESTLKSEELLKQIAENTSYIKDLVMINRETQLNTEELTYVMKSIYKVSKAENKQEADSLFSQAIQVINDSGEAAGNIANLTSLLLGIYTFVSTII*	.	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0036	cloud	direct	high	449	0.998	GCA_001544235.1_01900
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	59919	60335	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	29454	29870	GCA_001544235_1_8_64	GCA_001544235_1_8_64	-	144783	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MIQLLKEVDFSQTRANARAVLKNFRRLDRIAGRSLVDVRSPIITDMPKGIKHGNKAEDALIQMMDVEAERDAILTALMSLSIISRQILHYSFCVQDHYSNYKIAREVGYSERSIQRMKSEALIEFAEAYRNGKIIAYK*	mmseqs_cdd	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0037	persistent	direct	high	416	0.998	GCA_001544235.1_01902
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	60398	60487	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	29933	30022	GCA_001544235_1_8_65	GCA_001544235_1_8_65	-	144783	.	.	hypothetical protein	MGKKKSKIKKKKRRLQEKAIANGTQNSKK*	.	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0038	cloud	direct	moderate	89	0.989	GCA_001544235.1_01903
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	60480	60680	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	30015	30215	GCA_001544235_1_8_66	GCA_001544235_1_8_66	-	144783	.	.	hypothetical protein	MSYPEVYILGRQVDGVYVEYSEPYLSKIEAELDKHHYEIGQSMSHDAGSWKILKYGRPITLEVQHG*	.	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0039	cloud	direct	high	200	0.995	GCA_001544235.1_01904
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	60863	61045	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	30398	30580	GCA_001544235_1_8_67	GCA_001544235_1_8_67	-	144783	.	.	hypothetical protein	MEQLLLTKTGENEIGINATGMDDNEIVFTLAAALIGYSKELGLTEAILNESMSVLWKDGE*	.	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0040	cloud	direct	high	182	0.995	GCA_001544235.1_01905
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	61046	61531	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	30581	31066	GCA_001544235_1_8_68	GCA_001544235_1_8_68	-	144783	.	PF06319.12	DNA repair protein MmcB-like	MKTDLTRQAEKCLWHYTNKMGVFGCFEVTIGWFGKERVDFMTYSTDNTIRCYEIKVTLADLKSSAKQTFLGDYNYLVVTNELWEKIQANPDLKWKYSNQGILIFSELRHNLGITSVKKAKKQNVTLGTRATVLESMVRSLNREVEKFYKVNPFWGLSEEVK*	hhsuite_tools	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0041	cloud	direct	moderate	366	0.753	GCA_001544235.1_01906
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	61545	62150	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	31080	31685	GCA_001544235_1_8_69	GCA_001544235_1_8_69	-	144783	.	pfam12961	Domain of Unknown Function with PDB structure (DUF3850). The search results from NCBI sequence alignment indicates a conserved domain belonging to ASCH superfamily. Dali searching results show that the protein is a structurally similar to the PUA domain, suggesting it may be involved in RNA recognition. It has been reported that the deletion of PUA genes results in impaired growth (RluD) and competitive disadvantage (TruB) in Escherichia coli. Suggestions have been put forward that, apart from their usual catalytic role, certain PUS enzymes (e.g. TruB) may also act as chaperones for RNA folding. The interface interaction indicates that the biomolecule of protein NP_809782.1 should be a dimer.	MNKQEFIETLEEIRANINRNAEISDYTDFSRGKKDAYNNAIGLAKQIDEPEKVVVPKFVAEWLDKHKYSTDIIDLFLSVEYATDSDGFVAEKWDYSGEFYDWLSNSADIQFTLCDAMRYGYEVEKEPTIHELKILPEYFEAVVSGNKRFEIRKNDRNYKKGDILRLNEYQEGQYTGDVHVSEITYITDYAQQDGYVVLGIK*	mmseqs_cdd	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0042	cloud	direct	high	605	0.998	GCA_001544235.1_01907
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	62143	62310	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	31678	31845	GCA_001544235_1_8_70	GCA_001544235_1_8_70	-	144783	.	.	hypothetical protein	MKRLKISYIDLAVIIESIYYGEDEDVSDIDDLLKYLRNNGHLSTVLTVSRGISDE*	.	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0043	cloud	direct	high	167	0.994	GCA_001544235.1_01908
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	62307	62717	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	31842	32252	GCA_001544235_1_8_71	GCA_001544235_1_8_71	-	144783	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MIPKFRARDQRGNWHIGLLTFMFGQYAIVNESDENSVYLIDKETVGQSTGLKDKNGVEIFEGDILKIIEVTNEGISEYITDVIWEDCSFVFKSEGVDYYDSFLGAFSGDPNKTYPLFELLVIGNVWDNLKLLERTE*	mmseqs_cdd	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0044	cloud	direct	high	410	0.998	GCA_001544235.1_01909
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	62738	63058	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	32273	32593	GCA_001544235_1_8_72	GCA_001544235_1_8_72	-	144783	.	.	hypothetical protein	MNEQINLLELDNDKLWQFYGHYCNDDWSAKTETVNGVTDIVLGFRVKLSKNELRKICRDAIEISRIKYGYSVRFLTNNVKKELFVRFDNYTTSKKRDVFEHINLYF*	.	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0045	.	unmatched_CDS	none	0	0	.
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	63060	63524	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	32595	33059	GCA_001544235_1_8_73	GCA_001544235_1_8_73	-	144783	.	pfam08241	Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	MKRILDACCGSRMFWFDKQNEQVLFMDNREHYEKLDSGHVIDVNPNLVADFRKMPFEDNSFYHVVFDPPHLLRCGNNSWLAKKYGKLNEKTWKEDIQKGFHECMRVLKPNGTLVFKWNEEQIKLSEILSTIDCEPLYGNKRAKTHWLVFMKAGE*	mmseqs_cdd	nonviral_gene	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0046	cloud	direct	moderate	429	0.923	GCA_001544235.1_01910
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	63581	63808	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	33116	33343	GCA_001544235_1_8_74	GCA_001544235_1_8_74	-	144783	.	.	hypothetical protein	MKLTSVTFKPSAERFPPIVAIDLDQLTPDEYVTLRNLGYDTQLSKITKRTFEELEGHLGIRGDVAKKNGFYVLVK*	.	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0047	cloud	direct	high	227	0.996	GCA_001544235.1_01911
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	63936	64460	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	33471	33995	GCA_001544235_1_8_75	GCA_001544235_1_8_75	-	144783	.	.	hypothetical protein	MTKYPTQELKNKRKAHVLFMSTEVMKNIFELGYPFEFYEASHQFAIHSPLGVIDYFAISGTWVVRKGQDRGKGIRKMKQYIKKRVGDYVEKVKVVKCSGYLDKEGNITNQIKQAMHFTDDELANLAAEVAGGKVVNVVIPPEKPKQLREKAKEESFQEKTKKKTKSNQSWMNKK*	.	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0048	cloud	direct	high	524	0.998	GCA_001544235.1_01912
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	64464	65420	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	33999	34955	GCA_001544235_1_8_76	GCA_001544235_1_8_76	-	144783	.	PFAM:PF09681.9	phage-replisome-organiser	MAEISWIKLSTSLPDNKKIKRIRKLPDGDRVILFWVFLLARAGESNQKGGLFLTDTLPYSDEDLAADFDFTVEFVKFAILTLEKYSMVTTYEDVIFIKNWEEYQAIDGMEKVKEQNRIRQAKYREKQKQLSLSNVTSNVTRNADVTLSNGTDKDIDKEIDKEIDKDNKEESKKPPCKYSDEHLRLAQKLQNNLINDFPSEMKKVKIEKWADVFRLIEERDQQTIAAIDYVLDWLPTNSFWFGNIRSASKLRTQFEKLKFEIKNEKERGQQRTTYQRQNVRTENLPEWAKEPNKQQEEKLSPEEQLELDRQIKEYMEGK*	rep_hall_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0049	cloud	direct	high	956	0.999	GCA_001544235.1_01913
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	65425	66105	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	34960	35640	GCA_001544235_1_8_77	GCA_001544235_1_8_77	-	144783	.	PFAM:PF16784.4	Putative-HNHc-nuclease	MNLNNVYSAVIKSLKNNSITAVINEAINIERLKTMYFDYTGPREVEIRFIDPRKFSVAQRRFIFAMLEDIFSFTGQETEVLKEMFYLRFEALQGYEISLRNDSENTMDDATILANIILNFIFENNIPFRKGYDILPANQEYYFYKCITKRVCCICGKTGADIDHFDKALGRRKRKSVDHTEYTYAGLCRCHHTEKHNIGITAFKKKYHVKGIKLNQETIKKLHIGG*	common_virus_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0050	cloud	direct	high	680	0.999	GCA_001544235.1_01914
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	66102	67025	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	35637	36560	GCA_001544235_1_8_78	GCA_001544235_1_8_78	-	144783	.	pfam07083	Protein of unknown function (DUF1351). This family consists of several bacterial and phage proteins of around 230 residues in length. The function of this family is unknown.	MTNELTTELQFNVDFKASKITIQNEAQLAEMVESAVKHYSTMIFTDENIPEAKKARADLNKVVTLLDDQRKEVKNQYDKPLKDFEEKIKKYTEKISEVSSEINESIKSYEEAEKQKRSKKLQKVIAEMSENYNVSIDEIEIPSSWTNKTAFTVKGEPNKKTIEEIAASMVAVASEKERIKNDKLIVENYAKAVGLDSFSWVALIDKGSTAPELIKEIDSAVALKKEQEERERAKKEHDEAIAALKTETINNKTVDTATGEIITEEAPKTCKKQQEKTVTLRLTAEHQKLVALNNFIINNGIQVEVIE*	mmseqs_cdd	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0051	cloud	direct	high	923	0.999	GCA_001544235.1_01915
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	67025	67702	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	36560	37237	GCA_001544235_1_8_79	GCA_001544235_1_8_79	-	144783	.	pfam04404	ERF superfamily. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to ERF.	MNENSENLKELFDGMYKLKSKLIQPRFDAEVAYTTKKGPMNFQYATLKAIEEAIRKAAQESESGIDFQQNVVNENNALKVTTIITHVSGQYIVHGPFEFPNSGTNPQGLGSLTTYARRYSLSAAFGIAADKDDDGQTAAEKNNDTSKVNLISGKQLATLNDHIRQLSELSNSELDYVRNELSKELNVDVNENMPSSMFNKAVEVLKQWIQQFQPQPEENITWGQS*	mmseqs_cdd	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0052	cloud	direct	high	677	0.999	GCA_001544235.1_01916
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	67703	67939	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	37238	37474	GCA_001544235_1_8_80	GCA_001544235_1_8_80	-	144783	.	.	hypothetical protein	MRVEVDSMQRIVLIDNHSPYGSLIFEKDAINNHVAVYQDSEDEEVRTVFESLDESAYFNQVELIEGLQKVISLLKEGE*	.	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0053	cloud	direct	high	236	0.996	GCA_001544235.1_01917
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	67996	68151	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	37531	37686	GCA_001544235_1_8_81	GCA_001544235_1_8_81	-	144783	.	.	hypothetical protein	MFKAVGKDSLKIYVVEDTKALVFQKLKEKYPDTAINKAVFPEALFIQETKK*	.	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0054	cloud	direct	high	155	0.994	GCA_001544235.1_01918
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	68136	68261	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	37671	37796	GCA_001544235_1_8_82	GCA_001544235_1_8_82	-	144783	.	.	hypothetical protein	MTRKEKLQQTKKLADLWYQQQKNQIYIMQQKERREFRCLKQ*	.	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0055	cloud	direct	high	125	0.992	GCA_001544235.1_01919
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	68258	68431	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	37793	37966	GCA_001544235_1_8_83	GCA_001544235_1_8_83	-	144783	.	.	hypothetical protein	MRKIYNLRRIAVLLIVFGLGLLVGGNFNPIIQNVYIGLFIIWTLFYDLALEDREVNK*	.	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0056	cloud	direct	high	173	0.994	GCA_001544235.1_01920
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	68453	68701	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	37988	38236	GCA_001544235_1_8_84	GCA_001544235_1_8_84	-	144783	.	PFAM:PF00292.17	excisionase	MQITLAKTIDLQQAWMAKDEAIVYFGYQHHKPTFQKLLREFKEHKEFKDGYRLVTSCMPIIHIQKFDEFLVWREKNKYKRNK*	phrogs_hmm	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0057	cloud	direct	high	248	0.996	GCA_001544235.1_01921
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	68717	69436	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	38252	38971	GCA_001544235_1_8_85	GCA_001544235_1_8_85	-	144783	.	PFAM:PF03374.13	KilA-protein	MNELIKVTTNENDEQLVNGRELYEFLGVKDNYTDWFKRMIKYGFDENVDFISFSEKSDKPFGGRPQVNHYVKLDMAKEISMLQRTERGKQARRYFIQLEKFWNSPEMLTKRALEFQQKKIEVLQLENESLKPKALFADAVDASKTSILIGDLAKLIKQNGIDIGQNRLFQWLRDNGYLIARKGESYNMPTQRSLDLGIAEIKERTHNNPDGSIRISRTPKITGKGQIYFVNKFLHDKTA*	common_virus_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0058	cloud	direct	high	719	0.999	GCA_001544235.1_01922
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	69518	69751	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	39053	39286	GCA_001544235_1_8_86	GCA_001544235_1_8_86	-	144783	.	pfam05339	Protein of unknown function (DUF739). This family contains several bacteriophage proteins. Some of the proteins in this family have been labeled putative cro repressor proteins.	MCYDYSKLAGRIVEKFGTQYNFAIAMGLSERTISLKMNGKVSWKDTEITKACKLLDLETNFIHLYFFKEKVHVCEQR*	mmseqs_cdd	nonviral_gene	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0059	cloud	direct	high	233	0.996	GCA_001544235.1_01923
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	69910	70482	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	39445	40017	GCA_001544235_1_8_87	GCA_001544235_1_8_87	+	144783	.	PDB:2FJR_A	Repressor-protein-CI	MDRVKTSARLKQLMSERNLKQVDILRLSEPYQKELNIKMSKSTLSQYVTGKQSPDQNRIYLLSKTLDVNEAWLMGFDVSKKRIPDEQRSSEKDDFDIVPIFNQLEPKLQQLIYNEAKSHLEKQNKASNNVVNINKKKYDTLAAHSPDPDKVFTDEEKLKINQFLDKVDADYDRKQKECKHLFDDDSDDKE*	common_virus_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0060	cloud	direct	high	572	0.998	GCA_001544235.1_01924
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	70499	70972	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	40034	40507	GCA_001544235_1_8_88	GCA_001544235_1_8_88	+	144783	.	PDB:3DTE_A	IrrE-protein	MNEYELLVSEVQKKAPVIETDLFQNTGCYGLYRDGRIYIEKSLSLIKKRNVLAEELGHHDTSFGDILNQDCLENRKQELKARQYALEQLVTLDDLIKCSESGFSNHYTCAEFLGVDVETLKNVLAYYRQKFGDTHFYKGRIFEFNDLSVMILNTNLQ*	common_virus_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0061	cloud	direct	high	473	0.998	GCA_001544235.1_01925
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	71060	71614	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	40595	41149	GCA_001544235_1_8_89	GCA_001544235_1_8_89	+	144783	.	PFAM:PF03843.12	outer-membrane-protein	MKKIFASMAFLLFVVVIFVGCSKNVNPDSSKSSTQESSKTYKILVDQDSTEQKEKLEKISEYYKTADPKSYNSNVRVNSMLRDEKAHKGEKVYSLAKIIQIVDEPSDEYIYYMGYVTYAKNDREYVMLAVLKDNVYSKVLQDDEILFWASFAGSYDYTTNLGDNNTLPLLKVDMYKNVTASEEK*	phrogs_hmm	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0062	cloud	direct	high	554	0.998	GCA_001544235.1_01926
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	71656	71856	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	41191	41391	GCA_001544235_1_8_90	GCA_001544235_1_8_90	+	144783	.	.	hypothetical protein	MKVGMRKPSIKKSISARTTGKAKRKFKKAVIPGYGQKGTGFIKNPKKAMYNKVYNKTTFSFWDLFK*	.	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0063	cloud	direct	high	200	0.995	GCA_001544235.1_01927
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	71917	72489	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	41452	42024	GCA_001544235_1_8_91	GCA_001544235_1_8_91	+	144783	.	4LES_A	Protein - conserved hypothetical	MKKITISILLLSSLTLGACDSSSTAPEKNKKETSTTKITEKTSATKTSTSTESTSDNKKTVYNLGEWWEVPNQWKLKIDSVTSTDERNPYSDKSPQQVVIISYTYENLGYEDDIQDLFIMPENVVDSAGIMGETYPVSTTGAKPTPVGATMSGAQAAYGVQNPGGNIKILFKKYDSNRTGQAATFEIPVQ*	hhsuite_tools	hypothetical_protein	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0064	cloud	direct	high	572	0.998	GCA_001544235.1_01928
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	72556	73692	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	42091	43227	GCA_001544235_1_8_92	GCA_001544235_1_8_92	+	144783	.	PDB:1Z19_B	Integrase	MWIEELPNGKYKYFERYKDPYTEKYRRVSVTLNSKSNQAKKQAMMELQDKINNRMEKKDQKKVSLENLLNSWWQQHQLSIRKTSVKAYGKILKYIFSNMNVDVLIRNTDTKFFQDFINDLPHSWEYKKKFKSVLNMSFTYAQDMGMIDENPINRVKVVKPPLTKENFENIESKYLEEREVYQLLSYYYSTFQSVHHGRLAEFMYLTGLRAGEAISLTINDYVKNEHAILVNGTLDYSNGYKNATKELPKTLASFRKVELSNRAVEIIEELILEREIKFKEQTNYLFVGKTGNPIQVNSFNASLKKANESLGKNKINKTISSHIFRHSHISLLAELNVPVKAIMERVGHVDTETTLKIYTHVTKKAKTNLVEALNKYGK*	common_virus_hmm	common_virus	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0065	cloud	direct	high	1136	0.999	GCA_001544235.1_01929
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	73886	74407	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	43421	43942	GCA_001544235_1_8_93	GCA_001544235_1_8_93	-	144783	.	COG0590	tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]. 	MGKKETTLTQEEKEFFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVAYVEAGVLEEECRLLLVQFFKKLRAKRKEEKLLKNQKKD*	mmseqs_cdd	nonviral_gene	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0066	persistent	direct	high	521	0.998	GCA_001544235.1_01931
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	74485	75336	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	44020	44871	GCA_001544235_1_8_94	GCA_001544235_1_8_94	+	144783	.	COG3835	Sugar diacid utilization regulator [Transcription, Signal transduction mechanisms]. 	MIIENLSQLYPKGYLSKTIGSEATYSIPVDDQFFIVNKAFLSIKEQHLLEALFPISENPTITGNHPWFSYLFQQAKLPAEGTFRMLQIQTNVTKELQAEWQFNLTKMFPDTVDCFSPSNNMYILVEEQSKNTFQQEEIQGIFLTLDTDFDCTSAVFVGNFYSSEDILRRCFHEEQRIFSEELNSSSRTTVFSLTDVALHYFTKEAMSQNVLVEYYRRLLNKDTDIQPIISALWKNQGNISSTAKDLFMHRNTLHYRLEKFFEQTGLSLKKMDDLIFCYLLLRK*	mmseqs_cdd	nonviral_gene	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0067	persistent	direct	high	851	0.999	GCA_001544235.1_01932
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	CDS	75393	76238	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	44928	45773	GCA_001544235_1_8_95	GCA_001544235_1_8_95	+	144783	.	COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily [General function prediction only]. 	MKITAYVASAFSKNHEGGNKAGVVFMTQPLTRTQKMAIAKELGFAETAFISDSKIADFRLEYFTPKEEVDLCGHATIGAFTIMKHLNKLLQTEYTIETNSGLLAITANGEQLFMEQTVPTFYDTLTLEELSGCFDLNAVATAFPIQIVSTGLKDILVPIKNAQLLQDLQPNFEKIKLLSQKYRVIGMHLFALSEENIICRNFAPLYDIDEEAATGTSNGALACYLHHHQILQKTNYTFVQGYTLNAPSEVLVCLNTTPQKTIDQVLVGGRGYYVETKELFL*	mmseqs_cdd	nonviral_gene	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_CDS_0068	persistent	direct	high	845	0.999	GCA_001544235.1_01933
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	tRNA	46825	46896	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	16210	16281	tRNA-Trp	tRNA-Trp	+	97334	.	tRNAscan-SE score: 67.9	Trp	NA	tRNAscan-SE	.	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote	cenote	tRNA	66624	66697	GCA_001544235.1	BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235.1_BCQC01000011.1	GCA_001544235.1|BCQC01000011.1	GCA_001544235_1_11	GCA_001544235_1_11@C1	36009	36082	tRNA-Met	tRNA-Met	+	97334	.	tRNAscan-SE score: 75.0	Met	NA	tRNAscan-SE	.	C1	37253	30616	67869	GCA_001544235.1|BCQC01000011.1@region_30617_67869@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	tRNA	143390	143461	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	27487	27558	tRNA-Trp	tRNA-Trp	-	231011	.	tRNAscan-SE score: 62.6	Trp	NA	tRNAscan-SE	.	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote	cenote	tRNA	116875	116948	GCA_001544235.1	BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235.1_BCQC01000003.1	GCA_001544235.1|BCQC01000003.1	GCA_001544235_1_3	GCA_001544235_1_3@C10	972	1045	tRNA-Met	tRNA-Met	-	231011	.	tRNAscan-SE score: 47.8	Met	NA	tRNAscan-SE	.	C10	41325	115904	157229	GCA_001544235.1|BCQC01000003.1@region_115905_157229@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote	cenote	tRNA	59622	59694	GCA_001544235.1	BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235.1_BCQC01000008.1	GCA_001544235.1|BCQC01000008.1	GCA_001544235_1_8	GCA_001544235_1_8@C1	29157	29229	tRNA-Asn	tRNA-Asn	-	144783	.	tRNAscan-SE score: 69.7	Asn	NA	tRNAscan-SE	.	C1	45773	30466	76239	GCA_001544235.1|BCQC01000008.1@region_30467_76239@tool_cenote_tRNA_0001	.	.	.	.	.	.