core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1941959	1942453	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	1	495	GCA_001562215_1_1_1634	GCA_001562215_1_1_1634	+	4541594	.	.	hypothetical protein	MAVLGFALGQFGFEQEGIGAYEALTTCQAVKDFDSITCTTTSEYRRSLETTLDGNEDNTSAINALDRIRRHTHTFSGTIGDDDGRNGGAGRWQLLRNWFGANGRGASLLHHIRSGGNHLSFEASARASHFQLHSGHRESGQCWRCSEYEFIHVRIGNLRNKRSS*	.	hypothetical_protein	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0001	persistent	direct	high	495	1.0	GCA_001562215.1_01679
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1942750	1943208	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	792	1250	GCA_001562215_1_1_1635	GCA_001562215_1_1_1635	-	4541594	.	.	hypothetical protein	MNKYGNKTLIGATLLATLMMTGALTSCSGGAQEDAKSTGTEAEKPAGKDDGHDDHAADAKPGSAEAHSEGDGDGEHGEEESEEGVVKLTPDQIKASGIGVVAVGRGGGASTRLAGRVEPAIGGVLPSPQRSPAALSACLLRRVQPSRATSPW*	.	hypothetical_protein	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0002	persistent	direct	high	458	0.998	GCA_001562215.1_01680
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1943205	1944458	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	1247	2500	GCA_001562215_1_1_1636	GCA_001562215_1_1_1636	-	4541594	.	1YC9_A	Vibrio cholerae, outer membrane protein	MSILTGRSLSATGLAVAVLLALVPTGHVAAQTAPSYESLLSRLNQMPATVQGVALAEAAEARVQQARALPNPTVSIEAENAYGTGPYKGFSNADSIVTLSQPLEIWGQRGARVRAARAEAGAAGLRGDLMRSDAAGRLAATYAEAEAALRRYELASEALALIEQDAKAVAAMVSEGREPNLRGVQARSEVANAKASLDEAEAYRDAALARLAGVSLVDSPLTDIGESLLDRVPSHPIDNEAAPLAVRIAQAEADASGRLIDVERKRALPQLSASVAQTRFRQAGDQAYNVGISLSIPLFDRNRGAIQAAYAEQRAAEAVLEAQRRDSEAARLGAVASLKASNSRARAADESVQAADEAYRLARIGFEAGRISQLELRSTRSTLIAARGSAVDARLSRVAAEIDLARLEGRAPFVEAK*	hhsuite_tools	hypothetical_protein	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0003	persistent	direct	high	1253	0.999	GCA_001562215.1_01681
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1944515	1944826	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	2557	2868	GCA_001562215_1_1_1637	GCA_001562215_1_1_1637	-	4541594	.	.	hypothetical protein	MLLLLAAFVVVPVAEALACAQEATVSVGDVHALQSDSDSESSKSKDSSSADACGHGHCHHSTASLPAAGHDDLFADGRISLHSTEHGDVYALRLDGPMRPPRI*	.	hypothetical_protein	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0004	persistent	direct	high	311	0.997	GCA_001562215.1_01682
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1944967	1945149	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	3009	3191	GCA_001562215_1_1_1638	GCA_001562215_1_1_1638	-	4541594	.	cd14264	Integral membrane diacylglycerol kinase. This mostly bacterial family of homo-trimeric integral membrane enzymes, the products of the dgkA gene, catalyzes the ATP-dependent phosphorylation of diacylglycerol to phosphatidic acid. Escherichia coli DAGK participates in the membrane-derived oligosaccharide cycle (MDO cycle) by recycling lipids to restore phosphatidylglycerols that were used up in the biosynthesis of MDOs. DAGK also recycles diacylglycerols that are produced during the biosynthesis of lipopolysaccharides (LPS) back to phospholipids. DAGK is not the main source of phosphatidic acid in de-novo biosynthesis of glycerophospholipids. Escherichia coli DAGK has low activity as an undecaprenol kinase.	MGSVLFVLAFELLNSAIEAVIERYGPEIHELAGRAKDMGSAAVFVALCNVALTWAVILVG*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0005	persistent	direct	high	182	0.995	GCA_001562215.1_01683
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1945410	1946384	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	3452	4426	GCA_001562215_1_1_1639	GCA_001562215_1_1_1639	-	4541594	.	COG2194	Phosphoethanolamine transferase for periplasmic glucans (OPG), alkaline phosphatase superfamily [Cell wall/membrane/envelope biogenesis]. 	MMTPHPPGAKPHFLVIVVGETVRAQNWGLNGYGRQTTPQLAALDVVNFSDVTACGSNTEVSVPCMFSAYGRRDYDRDKIKGSESLLHVLERAGVRTLWRDNQTGCKGVCSDLAFESYRVPVKDVLCDDQACRDEIMLQGLHDSIEDNPGDVVVVLHQLGNHGPSYFKRYPEDLTKFTPDCRNADLGKCTRGEIVNAYDNAVLATDDFLAKTIRMLEQDKSHDTGLIYVSDHGESLGEANVYLHGLPYAIAPDTQIKVPMVMWMSDGMKSSNNLDLQCVRDRSKQPSSHDNLFHSVLGLMQVRTTVLDESLNLFSGCTSNAGHSL*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0006	persistent	direct	high	974	0.999	GCA_001562215.1_01684
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1947160	1947459	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	5202	5501	GCA_001562215_1_1_1640	GCA_001562215_1_1_1640	-	4541594	.	COG1807	4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis]. 	MATSVLAIGASLGVRDFGPVDEPRFALVATQMVATGSSLFPRRGAELHPDKRLFMWISAALLSLTQNLRTAVLAPSLVSGVAYVWMAFHLGTRNGGRVR*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0007	cloud	direct	high	299	0.997	GCA_001562215.1_01685
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1948310	1948927	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	6352	6969	GCA_001562215_1_1_1641	GCA_001562215_1_1_1641	-	4541594	.	TIGR01297	cation diffusion facilitator family transporter. This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence. [Transport and binding proteins, Cations and iron carrying compounds]	MSDCGCHHEAKNAQERRVLWIALALNAAMAVIGGIAGWIAHSTGLLADALDMLSDATAYAIGLVAIGRTARFKANAAWVSGSVLLVLGVGVLVEVGRRVMYGAEPVSGWMIGTALLSLAVNMAVLRMLAPLKSGEVHLRATWLFTRADVVANVGVILAGLLVWWLASPYPDFVIGALIGLYVIKEAFEILGDARRAGADARKTAA*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0008	persistent	direct	high	617	0.998	GCA_001562215.1_01686
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1949033	1949446	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	7075	7488	GCA_001562215_1_1_1642	GCA_001562215_1_1_1642	+	4541594	.	cd04785	Helix-Turn-Helix DNA binding domain of the CadR- and PbrR-like transcription regulators. Helix-turn-helix (HTH) CadR- and PbrR-like transcription regulators. CadR and PbrR regulate expression of the cadmium and lead resistance operons, respectively. These proteins are comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the C-terminal domains have three conserved cysteines which comprise a putative metal binding site. Some members in this group have a histidine-rich C-terminal extension. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.	MKISEAADASGCHLETIRYYERIGLLPRPGRSGNGYRVYGPADIERLRFIARGRDLGFSLEEVRSLLQLAGDEELSCGDVDRLARSHLTDVRARMADLERMATELERVIASCHGGQRAECTILSTLRQPVAVEATRQ*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0009	persistent	direct	high	413	0.998	GCA_001562215.1_01687
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1949443	1950714	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	7485	8756	GCA_001562215_1_1_1643	GCA_001562215_1_1_1643	+	4541594	.	PDB:3T79_A	DNA-recombinase	MTELDRYLDAATRQNTVRSYASALRHFEVEWQGHLPATPDSVARYLAAYAQTLAASTLRHRLAAIASWHRDHGFVDPTRSPLVRKVLKGIQTLHPGQVKQAAPLQIRRLVELDDWLAAAIAAAHARGDGAAALRHQRDRALVLLGFWRGFRGDELLRLDVAHLTLVPGQGMTCFLPRSKGDRQAAGVTYKVPALSRLCPVEATQVWLQAADLHEGPVFREVNQWGQVSAEGLHPNSLVRLLRELLTSAGFADAGLHSSHSLRRGFASWANDQGWDMKALMEYVGWRDVQSAMRYLDGRDPFARDRIEASLPSPTAPVPAMALPAPEGKPALQLRLRMVLTPFARTGRGAAKARGRIEEICLAPFQAVRLNTASSEYQLTVPTDPDRDLDEILATLLDDMHRMADTHQCFLEASLNTDDGRHWD*	common_virus_hmm	common_virus	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0010	persistent	direct	high	1271	0.999	GCA_001562215.1_01688
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1950738	1952894	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	8780	10936	GCA_001562215_1_1_1644	GCA_001562215_1_1_1644	+	4541594	.	PFAM:PF01526.16	Tn3-transposase-DDE-domain-protein	MATLHETAYPRLKPDPTAKELEEIYTPTAAEIAFAKQLTTQPGPQLAVLIHLKLFQRLGYFTVLAEVPERIRKHIAKAARLGRVLDTDQLERYDASGSQRRHMPQLRQFIGVHPLDKSGLAWLDTVATGAAQTKHTIPDIVNVLLEELVHHRYELPGFRTLELAAIGARERVNLGYYRSISHALTPATRTLIDELLRAPEGSRFTGWQSLKREPGRPTNKEVRFYLQHIRMLQQLAEQLPPIDVPVPKLKQFRAMARAYDASELAELAPDKRYALATIFIRAQHAKTLDDAAELFIKQVRGLENTAQQKLLAYQLEHAKRADFLIGQLKEILQAYQLDGSDSQRVDAIDNSLEAEVSTLLAECEEHMAYAGKNYLPFMLQPYGAVRPLLFNGLELMNLRATSHDAGMEPLIAAVLSLRNQRRELIEVASLGLDPEKDFDWMSKLWRQHVFGKRASAAGAGWMHRKYFELAVLVQVKDELKSGDLFIPSSERFDDYREQLVDEATLAQELEAYGQVSGLPTDAATFVAGLRAQLTDLADEVDERFPENVHADILEGRLVLRKGQRAEVSSAIATVDRLIAERLPESSIVDVLIDASQWLDLHRFFRPIAGTESQVEDLPRRVITTLFCYGCNLGPTQTARSIKGFSRRQVAWLNLKYVTEDVLEKAIVEVINTYNKFDLPGYWGSGKSASADGTKWSVYEDNLLSEYHIRYGGYGGIGY*	common_virus_hmm	common_virus	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0011	cloud	direct	high	2156	1.0	GCA_001562215.1_01689
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1952898	1953731	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	10940	11773	GCA_001562215_1_1_1645	GCA_001562215_1_1_1645	+	4541594	.	PFAM:PF01526.16	Tn3-transposase-DDE-domain-protein	MSDKYVALFSHFIPCGVHEGIYILDGLLANTSDIQPEIVHGDTQAQSYPVFGLAHMLGIQLMPRIRNIKDLTFFRPEPGRTYKNIQALFGDSIDWQLIATHLHDMLRVVISIRLGKITASSILRRLGTYSRKNKLYFAFRELGKAVRTLFLLRYIDDNEIRKTIHAATNKSEEYNGFVKWVFFGSQGIIAENVQHEQRKIIKYSQLVANMIILHNVERMSRTLAVMQKEGIELTPEILAGLSPYRTSHINRFGDYHLDLEREVAPLSYTAKVLEQAP*	common_virus_hmm	common_virus	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0012	cloud	direct	high	833	0.999	GCA_001562215.1_01690
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1953783	1954409	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	11825	12451	GCA_001562215_1_1_1646	GCA_001562215_1_1_1646	-	4541594	.	pfam18766	SWI2/SNF2 ATPase. A SWi2/SNF2 ATPase found in polyvalent proteins.	MIPSGVPTRVDRDQSGDLISPDRKDLDGQLFETFADCRWSIRATPVQANSRDDLREQLTAVEAGGVFFTTINKFAPERGQTSVPVLCERSNVIVIADEAHRTQYGFRADLDTKTGQTKYGLAKYMRDALPNAIYLGMTGTPVSLDDRDTEAVFGTYVDVYDMIAAQEDEAVVPVSYESRIIELRFNEAEKQALMRVGRESLRTGPNAT*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0013	cloud	direct	high	626	0.998	GCA_001562215.1_01691
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1954442	1955707	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	12484	13749	GCA_001562215_1_1_1647	GCA_001562215_1_1_1647	+	4541594	.	COG4097	Predicted ferric reductase  [Inorganic ion transport and metabolism]. 	MRLGSHSLIVPAVLASFALTASAVPGSTWPTTGMLSLGSGVAAVSLMALAAVLGARWKAVESLFGGLDRVYETHKWLGVWALVFASVHLVFKAGSPAWETAAILPLPGPVTRLVRQLSFVSLMLIVLLALNRKIPYRTWRWWHKLSGPLFLIVVAHWASFKSPIALASAAGAWLAVLSSLGVMGAAYKLLLYPLFSRHARYRLRAVSANGSAVHLQLVPEGPGIPFLPGQFAFVSFGHDGLREPHPFTIASAGDADGGIAFMVRSLGDYTERLVRDARPGMVAQVYAPFGRFEHRPTGRKEIWIAGGVGVTPFIAWLRDADASALDGVTFFHFFTPGRELPDAVDLAGMARARGVELIDIATGPSSAGFRQQFAQRVERAGASGVQISFCGPKGLLDQVRQLMRETGVAEDRLRHELFEFR*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0014	cloud	direct	high	1265	0.999	GCA_001562215.1_01692
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1955816	1956961	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	13858	15003	GCA_001562215_1_1_1648	GCA_001562215_1_1_1648	+	4541594	.	PRK00013	chaperonin GroEL; Reviewed	MSGAGDEPVTRVGEQVHVLVGFGVRHEVALPLEHQHLSGEAAHLRAGIGDIAEPVRAGAHVQPRASFLRLHLARIADHVAGEACRQRVQRGIRFRIRYGLDVEGHGDGLCQDQLGRHRRQCRIATVLLRIRRTEIQCCEVGLSLEKATINDLGRAKRVVITKENSTIIDGAGDAERIQARIGQIKAQIEETSSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALIRAKAAIENLKGANEDQNHGIVIALRAMEAPLREIVTNAGEEPSVIVNEVKAGSGNFGYNAANGQFGDMVAFGILDPTKVTRTALQNAASIAGLMITTEAMVAEAPKKEEPAMPAGGGMGGMGGMDF*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0015	cloud	direct	high	1145	0.999	GCA_001562215.1_01693
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1957205	1958746	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	15247	16788	GCA_001562215_1_1_1649	GCA_001562215_1_1_1649	+	4541594	.	PFAM:PF04986.12	Putative-transposase	MPRLAATVSQLQDAVAHATSPAAHLPTARYAPHRPERTLLYSLVQAHWPDFLARREVEDRSLPEYVREEFETYLRCGVLEHGFLRVVCEQCRAERLVAFSCKKRGFCPSCGARRMAESARHLVEEVFGPRPVRQWVLSFPYPLRFLFASKPEAIGPVLVIVQRVIAGWLADQVGVDHASAQCGAVTLIQRFGSALNLNVHFHMLWLDGVYDANVEPPRRKPRLRRARAPTSAQLTQLANTIAHRVCRHLSRRGWLEGEDESVFLSDSAGSDDGMDGLRMSSMTYRIATGRDAGRKVVTLQTLPGDAGSLEGDAGKVGGFSLHAGVAAEAHESHKLEKLCRYITRPAISEQRLSISPQGRVRYQLKTPWRNGTTHVEWDAVDFIAELAALVPPPRAHLTRFHGVFAPNANLRAQLTPSGRGKRPAGDAAPVDVSAHDEPRSPEQKRRAMSWAQRLKRVFSIDITTCAHCGCAVRIVASIEEPTAIRAILAHFEKHGALEQAHYRPAARAPPPAA*	common_virus_hmm	common_virus	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0016	cloud	direct	high	1541	0.999	GCA_001562215.1_01694
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1959071	1959793	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	17113	17835	GCA_001562215_1_1_1650	GCA_001562215_1_1_1650	-	4541594	.	cd02432	Nodulin-21 and CCC1-related protein family. Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter. 	MAESAPESDNSYIHKEHHYFQRVNWLRAAVLGANDGILSTAGLLIGVASADATPGAIFTAGLAGLVAGAMSMAAGEYVSVSSQADLEKADLAIERAALHSHPDAELQELTEIYISRGLTPETARDVARQLTEHDALEAHARDELGMSEIVAAKPVQAAVSSALSFSVGAVLPIIAAVASPAGLITPVVAVVSLISLGILGALSARAGGASKSKAAARVVFWGVAAMLATGVIGHLFGTVV*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0017	cloud	direct	high	722	0.999	GCA_001562215.1_01695
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1959941	1960684	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	17983	18726	GCA_001562215_1_1_1651	GCA_001562215_1_1_1651	+	4541594	.	COG1704	Uncharacterized conserved protein [Function unknown]. 	MLIGLGVIVLIAGFIILIYNGLVMKRQRVNQAFADVDVQLKQRQNLIPNLVETVKGYAKHEQDTLQQVIAARNAAQSAHTPAEMSQAEGMLTASLGKLFALAEAYPDLKANTNFIQLQNELSAIEDKLAAARRFYNSAVQDYNTSREQFPGSIIAGMFNFEGRDFFDVGVEGREALSTPPEVKFPEAGADFPQRPQHGRDGGRGQQPGRDGRAADVEESAQCQRQAGQQVIPGAAKGDQVEPAGEQR*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0018	cloud	direct	high	743	0.999	GCA_001562215.1_01696
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1961181	1961447	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	19223	19489	GCA_001562215_1_1_1652	GCA_001562215_1_1_1652	-	4541594	.	COG2183	Transcriptional accessory protein Tex/SPT6 [Transcription]. 	MSDIVKVKVLEVDVPRKRIALTRRLDDVPGEKPAREARGEQPRGGQDRGGGRGPGGPRGGRGPGGKPATASPPANNALADAFARARGR*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0019	cloud	direct	high	266	0.996	GCA_001562215.1_01697
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1961640	1963178	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	19682	21220	GCA_001562215_1_1_1653	GCA_001562215_1_1_1653	+	4541594	.	PFAM:PF04986.12	Putative-transposase	MLCLTAPEGRAAPRVARAANTALAAAPSYARHVPERTLLYALVEAHYPDFIASLEAQDRSLPEYVREEFETYLRCGVLEHGFLRVVCEQCRAERLVAFSCKKRGFCPSCGARRMAESARHLVEEVFGPRPVRQWVLSFPYPLRFLFASKPEAIGPVLVIVQRVIAGWLADQVGVDHASAQCGAVTLIQRFGSALNLNVHFHMLWLDGVYDANVEPPRRKPRLRRARAPTSAQLTQLANTIAHRVCRHLSRRGWLEGEDESVFLSDSAGSDDGMDGLRMSSMTYRIATGRDAGRKVVTLQTLPGDAGSLEGDAGKVGGFSLHAGVAAEAHESHKLEKLCRYITRPAISEQRLSISPQGRVRYQLKTPWRNGTTHVEWDAVDFIAKLAALVPPPRAHLTRFHGVFAPNANLRAQLTPSGRGKRPAGDAAPVDVSAHDEPRSPEQKRRAMSWAQRLKRVFSIDITTCAHCGCAVRIVASIEEPTAIRAILAHFEKHGALEQAHYRPAARAPPPAA*	common_virus_hmm	common_virus	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0020	cloud	direct	high	1538	0.999	GCA_001562215.1_01698
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1963493	1964422	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	21535	22464	GCA_001562215_1_1_1654	GCA_001562215_1_1_1654	+	4541594	.	COG1028	NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family [Lipid transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]. 	MGKLAGKIVVVTGSVSVIPGFDSIGSATVREALAEGADGVVISDINDEQGEAFAKSLNEEYGEGHALYVHTDVTDPKDVEKLFEITEKTYGRVDAIMANAGVATAEDFDKDPEEVLKSKKFIQSVNEDGVFNTALYGSRLMMKHGTKGSIVLVSSIHGVAGRPKVVNTETGEVLIERFNLVQYTMGKHGVVGLSKALALQFAEYGIRVNTVNPGYIMTPLFQAAVTTDKEKLSHEKSLETDAFDFTQLAALHPLCNDPVKDADIVPRGKFGGRMGVPAEIAKPAVFLMSDESSFMTGQKLVVDGGYTAC*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0021	cloud	direct	high	929	0.999	GCA_001562215.1_01699
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1964472	1965032	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	22514	23074	GCA_001562215_1_1_1655	GCA_001562215_1_1_1655	+	4541594	.	PFAM:PF04986.12	Putative-transposase	MKRGALAPRCCRYITRPAISEQRLSISPQGRVRYQLKTPWRNGTTHVEWDPVDFIAKLAALVPPPRAHLTRFHGVFAPNAALRAQLTPSGRGRRHDAAVEPADASANDAPRSPEEKRRSMSWAQRLKRVFSIDVTACVHCGGTVRIVASIEEPAAIRAILGHFVKQGAREEAHYRPAARAPPVQAA*	common_virus_hmm	common_virus	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0022	cloud	direct	high	560	0.998	GCA_001562215.1_01700
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1965124	1965750	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	23166	23792	GCA_001562215_1_1_1656	GCA_001562215_1_1_1656	-	4541594	.	COG0801	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme transport and metabolism]. 	MPTAYLSLGSNLDPVRFLREGIAALRARFDDVAVSAAYRFPAVGYDGPDFINAAAAIRTELSPEALNAWLHALEDAHGRDRSGPRYSDRTLDIDIVLYDDLVAEGVGNLRIPRDELRHAFVLKPLAQIAPGAVHPLERRTIAELWQAHPDHDVAFDEVAYRKFKRPFRAVCWVGGGRASPVLGTDRTSVSGISASRGHAAALSAAMLR*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0023	cloud	direct	high	626	0.998	GCA_001562215.1_01701
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1965836	1967116	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	23878	25158	GCA_001562215_1_1_1657	GCA_001562215_1_1_1657	-	4541594	.	6LYP_B	Mechanosensitive ion channel protein 1	MQEQLETLRTTLAPYPGAYTGIVIAALLLAAWLANWLTKRVLLRGLRRLLRATPLGGAQHDHEVQLRVIPRLANVVPALVIAAGIAVVPDLPAQVVTVVRALCQAFIVLTVALSISRALDLANQVYERRPDARNKPIKGYLQVAKIIMFVLVAISIVATLVGAQFLHILTGLGAMTAVLMLIFQDTILSLVASVQISNDGRVRIGDWIEMPSQNADGDVIDIALHTITVQNWDKTITTVPTKKLISDSFKNWRGMSESGGRRIKRAIYLDQHSVRFLEAGEVSRLHRFALIDGYLGEKQRELGEWNARPEVRGAEAVNQRRVTNLGTFRAYVEQYLRHHPKIHQDMTLLVRQLQPTSEGLPLEIYCFTNDVRWAFYEGIQSDIFDHLLAILPEFGLKVFQGSSDAPLDVNLRRVDAPSHPAGPGEG*	hhsuite_tools	hypothetical_protein	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0024	cloud	direct	high	1280	0.999	GCA_001562215.1_01702
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1967117	1967542	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	25159	25584	GCA_001562215_1_1_1658	GCA_001562215_1_1_1658	-	4541594	.	PRK11593	bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase. 	MRLLLPFPIPDSRFPIPALMDKVFIEALEIDALIGIYDWERRIRQTLVFDLEMGFDNRIPAASDDIALTLNYKAVSKRLVEYVSQSDFGLVETLAERCAEIVMNEFNVDWLRLKLSKPGAVRGARAVGVIIERVRTPQGNG*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0025	persistent	direct	high	425	0.998	GCA_001562215.1_01703
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1967552	1968430	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	25594	26472	GCA_001562215_1_1_1659	GCA_001562215_1_1_1659	-	4541594	.	COG0533	tRNA A37 threonylcarbamoyltransferase TsaD [Translation, ribosomal structure and biogenesis]. 	MRQTLAEAGLKIDEIDGVAYTAGPGLVGALLVGAGVARALAWALDVPAVAVHHMEGHLLAPLMEDDPPQPPFVALLVSGGHTQLVAVDGIGRYRLLGETLDDAAGEAFDKTAKMMGLPYPGGPQLAALAEQGVPGRFRFARPMTDRPGLDFSFSGLKTQVLLAWQQSDQSPQTKADIARGFEDAVVDTLAIKCERALDAAGCDVIVVSGGVGANKRLRAKLQEMADKRGGRACFPRPSLCTDNGAMIAFAGALRLQAGQREDAAVHVVPRWDMASLPPVAAERESGIGNGES*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0026	persistent	direct	high	878	0.999	GCA_001562215.1_01704
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1968660	1970414	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	26702	28456	GCA_001562215_1_1_1660	GCA_001562215_1_1_1660	+	4541594	.	PFAM:PF04986.12	Putative-transposase	MLCLTAPEGRAAPRVARAANTALAAAPSYARHVPERTLLYALVEAHYPDFIASLEAQDRSLPEYVREEFETYLRCGVLEHGFLRVVCEQCRAERLVAFSCKKRGFCPSCGARRMAESARHLVEEVFGPRPVRQWVLSFPYPLRFLFASKPEAIGPVLVIVQRVIAGWLADQVGVDHASAQCGAVTLIQRFGSALNLNVHFHMLWLDGVYDANVEPPRRKPRLRRARAPTSAQLTQLANTIAHRVCRHLSRRGWLEGEDESVFLSDSAGIRADGRPEAVRPAPAHALSEQERAAILEVANAPQYAALPPAQIVPRLADEGRYLASESSFHRVLHQAGQASHRGRAKTPQARRKPTTHVARAPNQVWCWDVTWLPSQVTGRWFYLYLILDLYSRKIVGHEVHEVESGEHAAHLLKRTALAEGIHAATNKPVLHGDNGAALKATTVLAMLQWLGVAPSYSRPRVSDDNAFVESLFRTAKYRPGFPIRGFADLQDARTWAAQFVHWYNHEHLHSGLRFVAPAVRHAGQDAAQLQVRTQVYELARQRHPQRWTGTIRDWSRVGAVTLNPDRDTVVPAQSKQNESKRLAA*	common_virus_hmm	common_virus	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0027	cloud	direct	high	1754	0.999	GCA_001562215.1_01705
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1970411	1970566	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	28453	28608	GCA_001562215_1_1_1661	GCA_001562215_1_1_1661	+	4541594	.	.	hypothetical protein	MKSGDNYLDTHRNARAHQSDPCVDLSSVHIILHRASRPDSGRLRRDRVKLG*	.	hypothetical_protein	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0028	cloud	ambiguous	low	5	0.032	GCA_001562215.1_01705
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1970799	1972139	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	28841	30181	GCA_001562215_1_1_1662	GCA_001562215_1_1_1662	-	4541594	.	6YII_A	Transcriptional regulator	MSSRTWNESRADKRIQATIDEVSISDITIKPYVRDTDLRSLSNKVAYRVDGVHLYADIVNLEDLLNVTMIEGEMCHRRTLRFLNLHYRAVERILANEDAILVDFHNQRLHSVVAKPYDDEAKRIHRAIAIGQMIMDVLARTGEDADHPAAKVRIGIDSGLALAVNNGRRGHREPLFLGEPANHAAKRSGGGKAAGIYLTNNARQKIGLAKVTSEDAAPLTVDEIKTSQNEVNLVSTVDKVVKDWEADLKAHPIGKFEFSAHTPPYAGLDFERLSVAATRRQDAATVYADIDGFTKFVSRNIADDLNAKHVVRALRVLRSELDAVLHTEFKGRKVRFIGDCVHGLLIEGTCANTNEEETISNMVLCAGGMRSSFALALKKLHTAGTNASSLGLQIGFEFGPMTATRLGMKGDLIRCSVSRGVLTAEREQGRCKGAETAIGAEAFKTG*	hhsuite_tools	hypothetical_protein	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0029	cloud	direct	high	1340	0.999	GCA_001562215.1_01706
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1972383	1973471	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	30425	31513	GCA_001562215_1_1_1663	GCA_001562215_1_1_1663	-	4541594	.	PDB:3T79_A	DNA-recombinase	MKDNSTIPVLAATAASLVLPEQLAQQAADAVRELLAEAAAENTTRSYTSALRYWAGWHAARYGIELMLPVHEATVLQFVVDHVQRRSTEGELTWELPPAVDQALVAAGLKAKLGPWTLSTVRHRIAVLSTAHRLKQVTNPCEQPAIRTVLSRAARAAVKRGERPRKKTAITLPELEAMLATCDDSLEGIRDRALLCFGFASGGRRRSEIAAADLRDLRRIGEAGYIYRLEHSKTQQAGVTATSTPDKPVLDRAALALQEWLEASGITEGAIFRRLWKQRVGPALSPAAVGEIVQRRARLAGLEGDFGGHSLRSGFVTEASRQGVALPAIMQLTEHRSVSSVVGYFQTGGAADNPAARLLDSE*	common_virus_hmm	common_virus	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0030	shell	direct	high	1088	0.999	GCA_001562215.1_01707
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1973576	1974466	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	31618	32508	GCA_001562215_1_1_1664	GCA_001562215_1_1_1664	+	4541594	.	pfam11740	Plasmid replication region DNA-binding N-term. The broad host-range plasmid RK2 is able to replicate in and be inherited in a stable manner in diverse Gram-negative bacterial species. It encodes a number of co-ordinately regulated operons including a central control korF1 operon that represses the kfrA operon. The KfrA polypeptide is a site-specific DNA-binding protein whose operator overlaps the kfrA promoter. The N-terminus, containing an helix-turn-helix motif, is essential for function. Downstream from this family is an extended coiled-coil domain containing a heptad repeat segment which is probably responsible for formation of multimers, and may provide an example of a bridge to host structures required for plasmid partitioning.	MARGITESDVHTAADALVANGERPTVERIRAHLGTGSPNTVTRWLDTWWKNLGLRLQSKRPDLKDAPAVLAELAGQWWALALQHARESVLEELAGARQSLAAEYDELRVQQQNFAEEASALHAQATASAQTERLALTQVTELRQLVDQLQSQLTESTQQRASVDQRLEQLDVAKQTLEARLHDERELARSERESLMEHARSVENRAAREVDQARQQIKDLQTKLASAEKLRVTTEQSLASALKAAQNAAAVSSKEADRQRAKSEVLEEQLSKIPAAIEAALRGKRKLPAPRKAKAK*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0031	cloud	direct	high	890	0.999	GCA_001562215.1_01708
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1975733	1975870	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	33775	33912	GCA_001562215_1_1_1665	GCA_001562215_1_1_1665	+	4541594	.	.	hypothetical protein	MQLDGLKLHQLYAVRRHWARLGDAAKVVQVEAAIDERIALIGGAK*	.	hypothetical_protein	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0032	cloud	direct	high	137	0.993	GCA_001562215.1_01709
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1976376	1976687	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	34418	34729	GCA_001562215_1_1_1666	GCA_001562215_1_1_1666	+	4541594	.	.	hypothetical protein	MANRVPYGIRRVDPRFYEPLPASSHLDVEVEALRAMPQPNYEIEHRIGDGPWLPKCRYGRDDAWAVARARWWNALLRGRRSYRVVAVLGSTRTVVYGEGASYA*	.	hypothetical_protein	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0033	cloud	direct	high	311	0.997	GCA_001562215.1_01710
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1976680	1977780	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	34722	35822	GCA_001562215_1_1_1667	GCA_001562215_1_1_1667	+	4541594	.	PFAM:PF02486.18	Replication-initiation-factor	MHEAAASGLPSSNRGVSETERIGVVIDWLASAFDLISVLDVYGMVDDRKAVLDDLDGPVGSCVRAVAQALAGHFFPGLFELGDPSRGRFYNWRVSLQAGGEHVGLLEFGGLATVRKDGVHTARLELTGNGCRIFEASSGDDHAQRWSSLASLLGLSDARITRVDIAADDFLGQWPVQWAVDRYNEGGFDRRGQRPKARLIDDMGNRTGKTFYVGSRKSEQQLRVYEKGREQGDMASEWVRYEGEFHASNRRELPLDMLTDPAPYLVGSYPILDFVDGIGQRLRIATEKLLANCTRAVMHFRRQYGPMINAMLHASGGDESTLSRLIVGTARAKLPPWCPRPEDAAQLLTAILFAPSGHIDSPESRA*	rep_hall_hmm	common_virus	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0034	cloud	direct	high	1100	0.999	GCA_001562215.1_01711
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1977794	1978084	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	35836	36126	GCA_001562215_1_1_1668	GCA_001562215_1_1_1668	+	4541594	.	PDB:1GVP_A	Rep-protein	MELIKVTILSAEVTERKGTFEDDSGKERAYTTRKQKAKLEAGGFGYPYDVRLEEGQTAYPVGEYVMDTASMIQVNKGTANWSKFPALVRATVPAKA*	rep_hall_hmm	common_virus	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0035	cloud	direct	high	290	0.997	GCA_001562215.1_01712
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1978288	1978545	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	36330	36587	GCA_001562215_1_1_1669	GCA_001562215_1_1_1669	+	4541594	.	PFAM:PF10389.8	head-protein	MNRNTRETALIRAKAVGRSLRDRVGAAVALGGAAAAPGLAFAADGFDSATVLAAIAAMVAAGVLIYTAYAVGKWTMKAFGLIGGK*	phrogs_hmm	hypothetical_protein	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0036	cloud	direct	high	257	0.996	GCA_001562215.1_01713
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1978658	1980163	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	36700	38205	GCA_001562215_1_1_1670	GCA_001562215_1_1_1670	+	4541594	.	PFAM:PF05616.12	attachment-protein	MRWLFTLLLVAAYVWQGIDPVQAQSSASCASSGICDQGEAYSQCKAAVSNSMSYYEPYGGYPKIAKDCTSVVDSYGNGGFECVVHATGPSTPRCRVSGSDGGDSSKTFWFSSGKTCSARNVTTPAGDKSAGSPMPWPSCVAGCKIQQEQISYSQPGGVMLYGRRNATYLNETCTSQSLSQNGAIDTREEQPKPTEPECTALGGGQTSCFKSNGDHCATASTGKTFCWTPNETGKKIDGDDAQVKGKKGEPVTPPNVKIDNKDWQRKEGHQQTACINNTCTTYNVTNYQTAPAGSAKNSTGDNQPDGSGNTSGNGKPSKGDGKDGDKDDGDSATDSGNCDTPPICTGDTLKCLQLKFTWKIECNTKGNEITNGTGCGENDIPVCAGKSCKAEAYSQVLQQWKQRCSFEGDRDAAKGDARSGAADGAGDDLAGVVGGLWAGDGVTPTLNQNRLSIGGGNVIPDVDIMGTKVVMPQGFYDALAIIKKIIIAAAMIAAFPILWRR*	common_virus_hmm	common_virus	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0037	cloud	direct	high	1505	0.999	GCA_001562215.1_01714
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1980165	1980479	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	38207	38521	GCA_001562215_1_1_1671	GCA_001562215_1_1_1671	+	4541594	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MSWFSVDNPFLGALAGVLNKLLKLKLALWIGKALSALGLGFAAQHFVYEPLIDQAVNVWNAVPAIAANWVHALGLDTAISIMLSAYGIQGVQRVFLSRKYEPPV*	hallmark_hmm	common_virus	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0038	cloud	direct	high	314	0.997	GCA_001562215.1_01715
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1980476	1981639	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	38518	39681	GCA_001562215_1_1_1672	GCA_001562215_1_1_1672	+	4541594	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MIGDTASISLLTGLPGSGKSLRMTQRIVELVEKGEHVYTCNINGISVPGVTPWDDPTRWRDLPAGAVLFVDEAQQYFRARRGGDPPEYISAMETIRHVGVRLVLATQQPNYLDTHLRGLVGFHEHLLRQSGKDETFIFRNHQVMDEVRMGLKRIKGLYDHEKWKLPQKYFQYYKSAELHTVKYRMPALLKKVLITGPIAILLAASVFGWLFWKGIRGQAEAEEMAATAPVAQPGQSSASAVRSDGERPAPRTGEQYIAALTPMVADVPWSAPAYVDRAVVSDPHVYCMASENSCRCVTEQSTRVVLRDDVCRDIARWGEPYNPYKQPAQPPQGGPVPYGAGDAQPTHLSQAGAPSSVVGYSSGSRGDVFPKNPARTIGGYTPPTSTL*	hallmark_hmm	common_virus	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0039	cloud	direct	high	1163	0.999	GCA_001562215.1_01716
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1983200	1983937	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	41242	41979	GCA_001562215_1_1_1673	GCA_001562215_1_1_1673	-	4541594	.	COG3142	Copper homeostasis protein CutC [Inorganic ion transport and metabolism]. 	MSSPYLLEIACNSAMSALAAQQGGANRIELFENLEQGGTTPSSGSIAIARDKVQIPLYVLIRPRPGDFHYGPIETEIMLRDIAHCRQLGCDGVVIGALDADGQIDVALCRELIRVAGPLDITFHRAFDAARDLPAALEQIVELGIKRILSSGGQTSAVEGSARLAKLVKQAGYRLQLMAGAGLNAANIADVARQSGCLQLHASAKALQRSAMRYRNPALKGLESNWVQSQAEMVCALRQALDAIS*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0040	cloud	direct	high	737	0.999	GCA_001562215.1_01717
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1983934	1984941	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	41976	42983	GCA_001562215_1_1_1674	GCA_001562215_1_1_1674	-	4541594	.	cd04513	Glycosylasparaginase and similar proteins. Glycosylasparaginase catalyzes the hydrolysis of the glycosylamide bond of asparagine-linked glycoproteins. This enzyme is an amidase located inside lysosomes. Mutation of this gene in humans causes a genetic disorder known as aspartylglycosaminuria (AGU). The glycosylasparaginase precursor undergoes autoproteolysis through an N-O or N-S acyl rearrangement of the peptide bond, which leads to the cleavage of a peptide bond between an Asp and a Thr. This proteolysis step generates an exposed N-terminal catalytic threonine and activates the enzyme.	MTTRRQFLQTSALLGALGTTAPGVLASPAAANGARVVSTWDFGVGANQAAWKVLAAGGSALDAVEAGARWAESELCNSTVGHCGNPDRDGVLSLDASIMSGDGRCGSVAAIVDILHPITVARAVMEKTPHVMLVGEGAQQFAVQQGHERRNLLTPAAEKAWREWLKTEHYAPQINAERRGIPGDKDNHDTLGMIAIDNKGDMAGACTTSGMAFKMHGRVGDSPIIGAGLYVDNEVGAATASGMGEEMIRNAASFLVVELMRQGRSPADACLEAIQRVVRKRPEASRTLQVCFLAMNRSGEVGAYALHRGFVYAVCDSNKQDALLESASVYTSTQA*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0041	persistent	direct	high	1007	0.999	GCA_001562215.1_01718
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1984973	1986013	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	43015	44055	GCA_001562215_1_1_1675	GCA_001562215_1_1_1675	-	4541594	.	PRK12408	glucokinase; Provisional	MSTPASADAARIDAIAGSLPASTIIGADVGGTYARLGWTQQQADGSLSVNGFRKYACAEHPSLAAILRDYADWLARETDAPPIAHAVVAIAGVVDGDNLLNTNLAWPVSLAATRNDSGLPSLEFINDFVAVAQAMAHAEADSLHLICGQPERGAAGPALVLGPGTGLGVAVYLPGGSPSVLPSEAGHAALAGSTALEHDVLQLLSQRYEHIDNERVLSGPGLITLYTILCELRGTTPQWHTPAELVDAARNGSDALAMESVEVFCAWLGSLAGDLALTFGARAVYLTGGITGHLSGPLHAGGFQQRFLAKGRLSAALKHVPVWRVEHGELGVLGALAWHVDKRATR*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0042	cloud	direct	high	1040	0.999	GCA_001562215.1_01719
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1986103	1986489	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	44145	44531	GCA_001562215_1_1_1676	GCA_001562215_1_1_1676	-	4541594	.	PRK14196	fluoride efflux transporter CrcB. 	MWLSFLAIGVGAALGAWLRYGLSLWLNPLHNTVPLGTLTANLLGGYVIGLALAFFATRPELSPQWRLFVVTGLLGGLTTFSTFSAEVVYLLQRQQLGWGLLTIGLHLIGSLSMTAFGWWTWRVLRHLT*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0043	persistent	direct	high	386	0.997	GCA_001562215.1_01720
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1986527	1987822	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	44569	45864	GCA_001562215_1_1_1677	GCA_001562215_1_1_1677	-	4541594	.	PDB:1SXJ_D	Activator-Clamp-Loader	MRPLAERMRPRTLDEMVGQKRLLAPNTALRRAVESGRVHSMILWGPPGCGKTTLALLLAQYADAEFKAISAVLSGLPDVRQVLAEAAHRFADGRRTVLFVDEVHRFNKAQQDAFLPHIERGTIIFVGATTENPSFELNSALLSRCRVHVLESVSPEDVVEALQRALADTERGLGEQEITVSPESLLEIARAADGDVRRALTLLEIAAELAAGEGGEITPETLLQVLADRTRRFDKNGEQFYDQISALHKSVRSSNPDGAIYWLARMLDGGCDPSYLLRRLTIMAVEDVGLADPRALEMAINVWNAYDRIGAPEGDIALSNLVVYLASTAKSNAAYMSLHAARADIANYGTQPVPMHLRNAPTRLMKTLGYGQGYQYDHDVEGGIALDQTAFPDDMGEQVYYKPVERGLEIKLKDKLDRLRLAREQARAQRK*	common_virus_hmm	common_virus	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0044	persistent	direct	high	1295	0.999	GCA_001562215.1_01721
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1987949	1988587	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	45991	46629	GCA_001562215_1_1_1678	GCA_001562215_1_1_1678	-	4541594	.	PRK00031	outer membrane lipoprotein chaperone LolA. 	MTAFLRHSVLAVALACAGLAADAHAGARDDLKSFTNGLRGLDGQFAQQVVDLRGRVKESSSGRVALSAPRQFRWEYTRPHPQLIIADGSKLWVYEPDLEQARVSPQGTEEQNNPLTALINPALLEQQYDISEEAAPRDGMQWLSLTPKRDTQASFDVAALGFSGGGLSRMELVDAVGQRTIITFSGWKKNPSFAAGTFRFVPGKDVDVVGER*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0045	cloud	direct	high	638	0.998	GCA_001562215.1_01722
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1988681	1991047	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	46723	49089	GCA_001562215_1_1_1679	GCA_001562215_1_1_1679	-	4541594	.	PDB:2IUS_D	DNA-TRANSLOCASE-FTSK	MAKQVPERDKSPKAAADARKQAAAADNPRRQKLWRDLALIAIAPALLYLLASLFTYSPTDPGWSQSGSVIAPVHNMGGKVGAWIADVLRQLFGYVAYLIPVMLAAVAWIAMFGLKKNDERGQDDLGPALRLVGIVGFLIGATGFLYLRLPPGDVARAGGGLGVLVGKSLQTGFGPVGSNLFLLVLLLTSITLATGLSWFAVMEKIGKWVLALGPVLNKKKEQASEWQQTRVLREEREEVRKVDAEVRAKREPVKIEPRPAPVIEKSDRAKRETQIPMFQGVNGDGSDIPPLALLDDPKPQPKGYDEQTLETLSRQIEFKLKDFRIDAQVVGAYPGPVITRFEIEPAPGIKVSQISSLDKDIARGLSVKSVRVVDVIPGKSVIGLEIPNVTREMIFLSELLRSKEYDKSASPLTLALGKDIAGRPTVADLARMPHLLVAGTTGSGKSVAVNAMVLSLLYKASPKDLRMLMIDPKMLELSVYQGIPHLLAPVVTDMKEAGNGLRWCVAEMERRYKLMSAVGVRNLAGFNKKVKDAIDAGQPLMDPLFKPNPEMGEAPRPLEPLPFIVIFIDEFADMMMIVGKKVEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRIAFQVSSKIDSRTILDQSGAEALLGNGDMLYLPPGTAMPDRVHGAFVSDEEVHRVVEHLKASGPTDYIEGVLDEVQTMGDGVVVGANGLPESSASAGDESDPLYDEALRIVTETRRASISGVQRRLKIGYNRAARLIEAMEAAGVVTAPEHNGDRTVLAPPPPKH*	common_virus_hmm	common_virus	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0046	persistent	direct	high	2366	1.0	GCA_001562215.1_01723
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1991336	1992304	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	49378	50346	GCA_001562215_1_1_1680	GCA_001562215_1_1_1680	+	4541594	.	PRK10262	thioredoxin reductase; Provisional	MSTSSLPTKHTRLLILGSGPAGWTSAVYGARANLKPLVVTGLQQGGQLMTTTEVDNWPGDAHGLMGPDLMARMQAHAERFDTEVVFDHIHTADLSKRPFTLTGDSTQYTADALIIATGATAKYLGIPSEEAFKGRGVSACATCDGFFYKDQDVVVVGGGNTAVEEALYLSNIARKVYLVHRRDTLKAEKIMQDKLFAKVAAGKIETVWHHQVDEVLGNDAGVTGVRVKSTLDGSTRDIEAHGFFVAIGHQPNTELFTGQLAMNNGYLEIRSGLGGNATMTSVEGVFAAGDVADQHYRQAITSAGFGCMAALDAERFLDEKGA*	mmseqs_cdd	nonviral_gene	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0047	persistent	direct	high	968	0.999	GCA_001562215.1_01724
GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote	cenote	CDS	1992439	1993188	GCA_001562215.1	CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215.1_CP014274.1	GCA_001562215.1|CP014274.1	GCA_001562215_1_1	GCA_001562215_1_1@C109	50481	51230	GCA_001562215_1_1_1681	GCA_001562215_1_1_1681	+	4541594	.	.	hypothetical protein	MVRNLCLSQDMVAELVKQDPALAYLGGSKRSLATMQLVLQSADPNVRKGLDEMLASAMGGNVKTREMLSPALAGCLVAGVRMAPERRQLALTWLQEDSMAGKTTAIEQLMTLALLKEVEGGGNAAATYFQQLPGKTLDTISPDSVGIGLFAMQEIAANNIINAAIQSYYTRSPQPLAGVPQPAVTYRFCNNSVAAAAGQARGVHRVAAFANARLQQLPEPVWNCDMTAIKEEVRTISWGTDVPSSPAPK*	.	hypothetical_protein	C109	51230	1941959	1993189	GCA_001562215.1|CP014274.1@region_1941960_1993189@tool_cenote_CDS_0048	cloud	direct	high	750	1.0	GCA_001562215.1_01725