core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	genomad_gene	genomad_length	genomad_strand	genomad_gc_content	genomad_genetic_code	genomad_rbs_motif	genomad_marker	genomad_evalue	genomad_bitscore	genomad_uscg	genomad_plasmid_hallmark	genomad_virus_hallmark	genomad_taxid	genomad_taxname	genomad_annotation_conjscan	genomad_annotation_amr	genomad_annotation_accessions	genomad_annotation_description	genomad_element_name_std	genomad_element_name_orig	genomad_element_gene_wrt_to_contig	genomad_element_gene_wrt_to_element	genomad_element_gene_start	genomad_element_gene_end	genomad_protein_translation	genomad_phage_region_id	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	567580	567993	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_538	414	1	0.355	11	GGAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	538	1	1	414	MNLKSKVAGLAMMFVVSSSFATTYQLSTHILDINKGVPAPNVGIELYKFNEKTEDWVQVAKTVTDGNGRVKGLLPLQDGKDNKGIYKLKFQVKQYLEQLYTKSFYPFIEVPFELKDNAHYHVPITLSPYGYSTYRGS	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0001	persistent	direct	high	414	1.0	GCA_001594245.1_00571
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	568187	569137	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_539	951	1	0.346	11	AGGAG	GENOMAD.197941.VC	1.782e-06	52	0	0	0	1246	Caudoviricetes	NA	NA	PF24738	NA	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	539	2	608	1558	MKSRDIMYLSGLLENDCKNIPTFSRPLDESERIIYKGFFPNLNLSTAKATSISTECYNCVAWTLGITDDWLWPEFHAYTTDKDTTLEDFDKFYEKMGFVRAASDKEAHITAWGNTTPEGKLYMTHASVTYPDYQGQWESKLGKFIRMKHDPNDLQGNSYGRRVAYYKKSTTQDLLQTRLRLIKERRPVTYDEAIKLNRKLVMLPKALIDSFDNKYEFWKETWDDSSDVLATFSSNPTTFKLSNEYQELVKLGKNSDILPLIVLRLLFFKNDFFALQLYDELQANKSLVVEYDDNFHLLEGEKGRAHLTVKKYISSL	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0002	persistent	direct	high	951	1.0	GCA_001594245.1_00572
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	569642	569818	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_540	177	-1	0.412	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	540	3	2063	2239	MEQPKLLSKAKVIEVTSLSDTTIWRMMRQGKFPKSVKASMGRVAWRKSDIDTWLAERS	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0003	shell	direct	high	177	1.0	GCA_001594245.1_00573
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	569837	569962	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_541	126	-1	0.349	11	3Base/5BMM	GENOMAD.124237.VV	1.546e-18	78	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	541	4	2258	2383	METRETVTQGEALEIVQYWIKYKDVKPEQLKIVEVPDILKK	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0004	shell	direct	high	126	1.0	GCA_001594245.1_00574
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	570019	570216	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_542	198	-1	0.449	11	AGGA	GENOMAD.217601.VV	1.367e-23	94	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	542	5	2440	2637	MKQIITTALLAIITGVMMLYAVALITLPAHADNTTDYCDNDMSEQISAEWEAKAKAEWIDKNYRL	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0005	shell	direct	high	198	1.0	GCA_001594245.1_00575
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	570302	570958	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_543	657	-1	0.481	11	GGAG/GAGG	GENOMAD.222649.VP	1.261e-43	160	0	0	0	1246	Caudoviricetes	NA	NA	PF10548;PF10547;COG3617	Prophage antirepressor	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	543	6	2723	3379	MTTLTFQSTTLSAIHQNNQIWLTVTEIGKALGYSDPFKSVKNIYDRHADEFTPQMTALIDMRTNGGIQKVRIFSLRGAHLIGMLSHTKVAKDFRRWVLDILDREAQQPKQLALPQPEKTYTVTLTEYELQTVAWACFAFRRNNNLLHELYSPLAAIGSKFAVEARDNAVEYRNTLRRFNEVVKRITVDIEADPETNWRVLKHIRSFNEKIFGKVETTI	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0006	shell	direct	high	657	1.0	GCA_001594245.1_00576
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	571402	571626	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_544	225	-1	0.404	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	544	7	3823	4047	MWNIAKRPFEKETLDDWAKLSVDVAKVAILAIPVILYGKDPILIKLLNSILLCLGIYGGLFAGRKFRKMKEEVQ	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0007	shell	direct	high	225	1.0	GCA_001594245.1_00579
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	571691	572047	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_545	357	-1	0.367	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	545	8	4112	4468	MKRNWDLIRKILIKLEEKADSTSWLQDNEIKGYDTQTIAYHYKLLTDAGLIKSVDMSSMNEISYAALSLTWQGHEFLDKIRNDSVWNKVKSTVQSKSLDLSFDVIKQVATALIGSMLP	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0008	shell	direct	high	357	1.0	GCA_001594245.1_00580
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	572044	572166	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_546	123	-1	0.382	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	546	9	4465	4587	MQLIFGSLGFAPPREGLFYLMMTSYNLYRMFFVSALGEIK	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0009	shell	ambiguous	low	4	0.033	GCA_001594245.1_00580
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	572355	572618	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_547	264	-1	0.348	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	547	10	4776	5039	MSKVLYRYKEYDEPKNPDDGEPWVSEEYKDLKCIISDIAQENHIAWELYNESDGIDIYIWLDGDFDNRKKFAVSPYYRLLFSVTELE	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0010	shell	direct	high	264	1.0	GCA_001594245.1_00581
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	572962	573405	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_548	444	1	0.453	11	GGA/GAG/AGG	GENOMAD.055069.VV	1.115e-80	263	0	0	1	1246	Caudoviricetes	NA	NA	PF06892	Phage regulatory protein CII (CP76)	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	548	11	5383	5826	MAMKKVIIEMIEKIPGGKSAVAGFLGFSEAELNNRLYQTKGQRFKNEELIALQVEYGCTDFIEELCRNAGGRFVPDAIASELDAVEISTLQLHELSARGLLFEALESALADGEITTDEEDVIRKLLNKHLAATQHSIECVISLNKRQ	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0011	shell	direct	high	444	1.0	GCA_001594245.1_00582
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	573448	573816	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_549	369	1	0.466	11	AGGA	GENOMAD.021947.VV	6.265e-09	55	0	0	0	1246	Caudoviricetes	NA	NA	PF14090	Helix-turn-helix domain	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	549	12	5869	6237	MENINQNETTSQTQSAQILKALKNGERLTHLDAEKRFNCLRLGARIYDLKKRGHNIISKMITVPSGNRRDSDRHPLVQRYANPICGSFTGARWQRHIHDHRARNLCSKHRYNEKREDYDGRQ	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0012	shell	direct	high	369	1.0	GCA_001594245.1_00583
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	573967	574233	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_550	267	1	0.449	11	AGGAG	GENOMAD.093870.VV	1.39e-49	170	0	0	1	1246	Caudoviricetes	NA	NA	PF22479	Cyanophage baseplate Pam3 plug gp18	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	550	13	6388	6654	MKQIPVTQFPHQEQTFEFNGTKIRLTLRFNSVGRFWAMDVFEPVNQKQICTGQALACGVPLLVRSTQPYFFFLEDESGAELDPMEISD	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0013	shell	direct	high	267	1.0	GCA_001594245.1_00584
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	574424	574783	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_551	360	1	0.464	11	AGGA	GENOMAD.009002.VV	9.18e-37	135	0	0	1	1246	Caudoviricetes	NA	NA	PF10934;COG3628	Phage baseplate assembly protein W	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	551	14	6845	7204	MTTRVRRLDKNHDWTFGQGFSNYATESEAIAQNVQTRLWSFANDWFLDLEHGLPWLEQMGRGVNLADWEIKIKRHVLGTEGVSKITDYQADFEPDSRKLTISIDYQDIYGQQQTARYTA	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0014	shell	direct	high	360	1.0	GCA_001594245.1_00585
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	574809	575228	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_552	420	-1	0.431	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	552	15	7230	7649	MLRYPVEITPDDNGTFLVTCPDIPEMASVGEDIESALLEAEEGLETALEFYFDDKRPIPMPSQPKDGQYMVPLSLLRSLKVFLLNEMLAQGVRKAEMARRLDVHMPQVDRLLDFRHPSKIDFVEKAFKKLGREINLSVH	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0015	shell	direct	high	420	1.0	GCA_001594245.1_00586
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	575280	575462	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_553	183	-1	0.415	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	553	16	7701	7883	MKYSEFLRYLLEQGCKVEATKRGSHRKVTLNECQTVFPYHGSKEIGTGLVHKIKKDLNLK	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0016	shell	direct	high	183	1.0	GCA_001594245.1_00587
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	575717	575848	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_554	132	1	0.333	11	AGGA	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	554	17	8138	8269	MNTTNIIAGIIVILILCSPFALIYWIVKKIKQRRGQKTYLKSV	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0017	shell	direct	high	132	1.0	GCA_001594245.1_00588
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	575963	577129	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_555	1167	1	0.416	11	None	GENOMAD.066051.VV	1.014e-253	776	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	555	18	8384	9550	MGALGLTLTEIARATLTQYGLTQLYTGYDSQREDLALTPKTAFLLKQLIDSNTRALGDVIPNSKKSDEVNSNSSDTVATSKAVKTAYDKGVEAKTAADNAQHTANSAENIANNANDNANGRVSKSGDTMTGQLSVPNIITKHHGTGGYHNQFDMQAPFFVDAVGYTRESTFHPFIKGKVRTKGDWGAVFSIGYTTKQTGYYENGEFGRGVINLNEDNGTFKNWEFEHNGTFRSAGDVVTSTGRSLNSTIYKEGNPHDIALSWLTDGLKVRVDTTDLGRVTFRHDFQYQKIGNFEIRRYPDGTMIQTYIIYQNDLKDFNDEKSFNWAQAFIDTPIVIPFITTEVNDAHDCGVNILTKSNHATVFYREYEHGHPDQGNVRIQFYAIGRWK	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0018	shell	direct	high	1167	1.0	GCA_001594245.1_00589
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	577129	577740	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_556	612	1	0.418	11	GGAG/GAGG	GENOMAD.060523.VV	2.93e-54	190	0	0	0	1246	Caudoviricetes	NA	NA	PF14301	NA	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	556	19	9550	10161	MAIYYKDGFYNDENGGYVPQGAVEITEQTYRTLLEGQSAGKQIIADSEGKPILVEPQPSHLHEFKNGKWIISEKNKTALLLEQRKTICAKINQLRDEKTAGGVYVESIGKWFDSDDKARANVIELKAAFDVLGDETVPWTTYENDVVMMDHEKMKALFKELKDSKLHNHQVATKHKLALEQSAEPLNYNYSTGWSKTYADKEN	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0019	shell	direct	high	612	1.0	GCA_001594245.1_00590
GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	genomad	CDS	577721	577957	GCA_001594245.1	CP012958.1	GCA_001594245.1|CP012958.1	GCA_001594245.1_CP012958.1	GCA_001594245.1|CP012958.1|provirus_567580_577957_557	237	1	0.456	11	GGAG/GAGG	GENOMAD.219518.VP	1.249e-15	72	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad	GCA_001594245.1|CP012958.1	557	20	10142	10378	MQIKKIKIWGYHVVVAIDQLFNALIGGAADETLSSRTYRGAMLAPKPRKRWRVLYRLIRHYAFVSLSFFLPESSTPYF	GCA_001594245.1|CP012958.1|provirus_567580_577957	GCA_001594245.1|CP012958.1@region_567580_577957@tool_genomad_CDS_0020	shell	direct	high	237	1.0	GCA_001594245.1_00591