core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	1	191	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	1	192	GCA_001618065_1_19_1	GCA_001618065_1_19_1	+	13005	.	.	hypothetical protein	DVFGDHGLGGLLKEGGHGKSPKCLGGNLGDFGEFCKGLRPSEILRNRFQTAFCYLIFEAMIAS*	.	hypothetical_protein	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	198	740	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	199	741	GCA_001618065_1_19_2	GCA_001618065_1_19_2	-	13005	.	pfam02462	Opacity family porin protein. Pathogenic Neisseria spp. possess a repertoire of phase-variable Opacity proteins that mediate various pathogen--host cell interactions. These proteins are integral membrane proteins related to other porins.	MKKVLVTLIALSLPTFALADATKGFYVQADAGHATVKLGGASIKGFSPRISVGYDFGDFRVAADYTHYKSAKINVPSVYAEAKYHSDGVSAIYDFDLQAPVKPYVGARLGLNHSTHKYQTAGQTAERKDTKIGVGAMAGVSYDVTQNVALDAGYRYNHWSKINNVKLHTHEVSAGVRVTF*	mmseqs_cdd	nonviral_gene	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0002	cloud	direct	high	542	0.998	GCA_001618065.1_00279
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	1005	1307	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	1006	1308	GCA_001618065_1_19_3	GCA_001618065_1_19_3	-	13005	.	PDB:2G1P_A	Adenine-specific-DNA-methyltransferase	MENESWERCFQRYDREHRFFYADPPYWQTTGYDRSFDWSQYELLAKMMRECKGKVMLSINDHPDIRELFKGFRITELNLVYSISRDKTQKTSGELVICNW*	common_virus_hmm	common_virus	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0003	cloud	direct	moderate	165	0.545	GCA_001618065.1_00280
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	1404	2195	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	1405	2196	GCA_001618065_1_19_4	GCA_001618065_1_19_4	-	13005	.	.	hypothetical protein	MGQLVRLNTVFGNKKLPVIIDRDISALESEILSLPNLRGFWDMSDTASRTVSGGKITKILDKSAAANHLVADHSSAPVVDGSVLGGLSSAYFDGSVGMVSEGNVFNAAWDKVTFVVFAVKSEITNPINTVLVAGKTNATVTLYANNSNIGINSANLFLNGGGNLPGKPISVIASTNLTENRSTIRSEESVVQQSNLAPRTLKTEPIYIGKWPESANPEVAIGWKGYIGHVMVFNGYIEDSQYISDLLLEYARRKYNTSAWENR*	.	hypothetical_protein	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0004	cloud	direct	high	791	0.999	GCA_001618065.1_00281
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	2199	2831	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	2200	2832	GCA_001618065_1_19_5	GCA_001618065_1_19_5	-	13005	.	PFAM:PF03629.17	tail-fiber-protein	MLTCQTSSAAGYKKTAPTRHQFTTPLLQLKASAEHPRIFLVCPKYQFSYKDYAHILANDTKWLGEYYAKVKKIVIDEGRDWLGLRPKALRKIDACTVEIEFEVPVAPLVFDESLVSNPGNYGFSLYNAGEVAISSVELLPDQNKVRIVATDELPPTATITYAFDNGIGGKSGKTEGARGNLRDSDPAMSLDGKFNLYNWAFTFELPINQE*	phrogs_hmm	hypothetical_protein	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0005	cloud	direct	high	632	0.998	GCA_001618065.1_00282
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	2825	3430	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	2826	3431	GCA_001618065_1_19_6	GCA_001618065_1_19_6	-	13005	.	PF03677.13	Uncharacterised protein family (UPF0137)	MEVLGHAVGATANELAIHSMAVMDRFSNGEAYNEAVWIERGRFAVRQTMEGMFELGRALIIIKEHTPHGRFAEIAEKEFGLGRRESQRLMNATLRFIDPKMKQAQPQLMKLGKSKLLELLVEDDDTLLEFAEGGEINGNTLDDVDRMTVKELRVALRESRETAEAKDKVIADKNKKVDELAEKLAKKQTGVREPKKNSQLC*	hhsuite_tools	hypothetical_protein	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0006	cloud	direct	high	605	0.998	GCA_001618065.1_00283
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	3466	3744	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	3467	3745	GCA_001618065_1_19_7	GCA_001618065_1_19_7	-	13005	.	PFAM:PF02319.19	transcriptional-regulator	MSAKGVRLLKVFKALEAHPIIGISNKEISDGLGISPVHVSRDLEDLIAEGLVVKLDNGNFAYSIKTLQIAERFRQQQERLTARLQEIEQRVY*	phrogs_hmm	hypothetical_protein	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0007	cloud	direct	high	278	0.996	GCA_001618065.1_00284
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	3744	3944	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	3745	3945	GCA_001618065_1_19_8	GCA_001618065_1_19_8	-	13005	.	TIGR04111	phage-associated protein, BcepMu gp16 family. Members of this protein family occur in Burkholderia phage BcepMu, Pseudomonas phage B3, and Burkholderia phage KS10, and many bacterial putative prophage regions. The member from Burkholderia phage BcepMu is named gp16. Homology suggests DNA-binding activity. [Mobile and extrachromosomal element functions, Prophage functions]	MNAEKVKEGFRKRGETIKSWCDERGYDPTYVSRILNGTIKANRGKAHEIAVELGIKQQSGDVKRSA*	mmseqs_cdd	nonviral_gene	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0008	cloud	direct	high	200	0.995	GCA_001618065.1_00285
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	4085	4756	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	4086	4757	GCA_001618065_1_19_9	GCA_001618065_1_19_9	+	13005	.	PDB:2FJR_A	Repressor-protein-CI	MSLIFTRNIRELLSEKDLTIAEFADAIGEKVSRINDVLSGKQRPPFDIVEKILTTFDVDARWLITGKNNSRIEPADIRNYSESLDYDYVPMFDVEVSAGNGAAAYGVTDPAMHLAFRKDWLKSRGLFAKDLNCVVARGDSMEPTINSKDTLLVDTSKNNPRDGQIYVIRSGDTLWVKRIQKQLDGSLLLISDNDTYPPMSLTLADHPDIQVIGQVVQISKDLS*	common_virus_hmm	common_virus	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0009	cloud	direct	high	671	0.999	GCA_001618065.1_00286
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	4774	5001	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	4775	5002	GCA_001618065_1_19_10	GCA_001618065_1_19_10	+	13005	.	PF05901.11	Excalibur calcium-binding domain	MKKSYLTALLPALLLLAPSVATAKSCKDFPTHQAAQKYFQAKKPGWKQLDRDGDGRACDCNPGGNGKKCPKKGKK*	hhsuite_tools	hypothetical_protein	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0010	cloud	direct	high	227	0.996	GCA_001618065.1_00287
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	5020	5610	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	5021	5611	GCA_001618065_1_19_11	GCA_001618065_1_19_11	+	13005	.	.	hypothetical protein	MKTTTFLAMLMLALSASVNAKGVIKTGGMIGPHPQTFSDRFNGMKSDIPGLFPRISITTGKINQIQNLGNGVTLTAKLVSAADAFETVGMTCNTQTSTKRITACMLGMYYAATALDTSINQTRFMDNIKAATNTGFSIYNQNGIDYAITVNRKKKSVAMIAKSDTPMQIEQMEDIDEEHMKSSKCNPMVELCIKAK*	.	hypothetical_protein	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0011	cloud	direct	high	590	0.998	GCA_001618065.1_00288
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	5702	6205	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	5703	6206	GCA_001618065_1_19_12	GCA_001618065_1_19_12	+	13005	.	CDD:COG3926	Lysozyme	MSTKFNQFIERVLSHEGGYVNHPKDPGGETNWGITKRTAQANGYNGSMRAMTREQAIGIYRQAFWERYHADQMPEAVAFQFFDACINHGHGNAARMLQRAAGVPDDGVIGAVSLKAINSLPENDLLLRFNAERLVFYTKLGTFGSFGKGWIRRVAQNLIHASADNTD*	common_virus_hmm	common_virus	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0012	cloud	direct	high	503	0.998	GCA_001618065.1_00289
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	6219	6392	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	6220	6393	GCA_001618065_1_19_13	GCA_001618065_1_19_13	+	13005	.	.	hypothetical protein	MSKKSLIALMTAAMLPDFSHSDLGIRYAMPTQGCWMQAHRKSGVAAAKRAAKKKRRK*	.	hypothetical_protein	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0013	cloud	direct	high	173	0.994	GCA_001618065.1_00290
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	6630	7025	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	6631	7026	GCA_001618065_1_19_14	GCA_001618065_1_19_14	+	13005	.	PFAM:PF03245.12	Rz-like-spanin	MWKTLNPIWQTLILILLIAGAVPTIYFCGYKSSAKKAEAEKAKVIATYQASALVAEQLYTEKLKAANEEKQRWFDFAQAQSRDLATAYQQIGRQAAQLEKQIDETVQKDGNRFNGLGTNSVQLYNRALGHD*	phrogs_hmm	hypothetical_protein	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0014	cloud	direct	high	395	0.997	GCA_001618065.1_00291
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	7217	7426	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	7218	7427	GCA_001618065_1_19_15	GCA_001618065_1_19_15	+	13005	.	PHA00080	DksA-like zinc finger domain containing protein	MTDFADRASEREAIFLAASLAKHQPPSETTASLSHCEDCGAPIPKARQQAVKGCTRCVVCQEYFEHGWP*	mmseqs_cdd	common_virus	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0015	cloud	ambiguous	low	9	0.043	GCA_001618065.1_00292
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	7429	7749	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	7430	7750	GCA_001618065_1_19_16	GCA_001618065_1_19_16	+	13005	.	PFAM:PF07889.11	lipoprotein	MEKTFIHIEFWQLVGFLLSFLGICFTFGKMLLTQFREQQDERQKQQERLQGKVEIMENKLAEFNAGLPLTYVLREDYIRNQVVLEAKLDNVAEKLTEIYKMESVKK*	phrogs_hmm	hypothetical_protein	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0016	cloud	direct	high	320	0.997	GCA_001618065.1_00293
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	7746	8063	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	7747	8064	GCA_001618065_1_19_17	GCA_001618065_1_19_17	+	13005	.	.	hypothetical protein	MISQELIAKQRREGMRWNIINTLNKARPHTTSETFLLDIMNAIYPQTTALELRQQLDYLADRKMVDLNKAPHGLWFADLTSLGVDIAEYTVECRAGIARPEKVWS*	.	hypothetical_protein	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0017	cloud	direct	high	317	0.997	GCA_001618065.1_00294
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	8066	8605	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	8067	8606	GCA_001618065_1_19_18	GCA_001618065_1_19_18	+	13005	.	pfam11985	Protein of unknown function (DUF3486). This family of proteins is functionally uncharacterized. This protein is found in bacteria and viruses. Proteins in this family are about 190 amino acids in length.	MAQRSSIEKLPEAVRHEFERKLVENGFSDYQAIAEWLQDQGYEISRSAAHRYGQKVQRRFAAIKSSTEAARLIAEGAADEGDTRSEALVAMVQSELFEAMLEIGEMEDLSAVDRFSMVAKAAKNIATLTSASTRLKEYQAKVKAKVAAAADDVAKQARKGGLSDEAAEAIRKQILGIAS*	mmseqs_cdd	common_virus	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0018	cloud	direct	high	539	0.998	GCA_001618065.1_00295
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	8732	10231	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	8733	10232	GCA_001618065_1_19_19	GCA_001618065_1_19_19	+	13005	.	PDB:4IEE_A	Large-Terminase	MSPENKIEDRTPMALLPYQQRWCADTSPVKLCEKSRRIGLSWGEAADTALLAASANGMDSWYIGYNKDMALEFIRDCAGWAKHYQLAAGEIEETEEVFVEGDDRQSVLAFVIRFASGYRITALSSRPSNLRGKQGRVIIDEAAFHEQLGELLKAAMALLMWGGQVHIISTHDGVDNPFNELINDVRAGKKPYSVHRITFDEAVEQGLYRRICLRLGKDWTPQGEASWCKEIRDFYGEDASEELDCIPKNGGGKWLNRALIESRMTPYTPVIRYDQTDDFGLLPEPRRAAEVADWIADTLQPLLDGLDKTCVSFVGEDFARSGDRTVIVPLLQSKDLILKPPFVLELGNMPFAQQEQIMQHLLAKLPNLRGAALDARGNGQSLAEAMRDAFGAEVVEAVMLSENWYRTHTAPFKAALEDGTLDGLPRDEDILTDLRAFELVKGVPRIPDTRTKGQDGKKRHGDAAIAFVLAHYASRELNAGPVRVASRRVRRISRTTHGF*	hallmark_hmm	common_virus	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0019	cloud	direct	high	1499	0.999	GCA_001618065.1_00296
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	10253	11764	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	10254	11765	GCA_001618065_1_19_20	GCA_001618065_1_19_20	+	13005	.	PDB:5NGD_C	Portal-protein	MKKPHFKLKTNHGNITFKPDDLTGHIAVSRQFLGGFGGWLPNPDPILRKMGKQIHVYRELLRDELVGSFVRRRKAAVARLDWKLSGDEVEDRVLDFVENWLAADVDVYKICKDIMNASFFGYQPIEIIWQKGSQWLPSEIVAKPQEWFGFNDERELVFTENGLSQEPLPPYKFLCPRHEDDYLNPYGLGDLGLVFWLVTFKRGGMKFWVSFTEKYGAPWLIGKEPRSNTHSDTEKLLDALEALISNSVGTIPNDSSVEIHEASGKSSSVDAFDKLLKECKSGINIALLGQDQTTDKETNHASASAGLEIADDIRDGDRRIVEAAFNELIEWVVELNFGDVACSKFELFENEEAGTKERAERDSMLSGAGVKFTPQYWKRTYGLEDGDIIETAEILTMPSENERSEFLSSKNRPVDFAESRDENDAGLIIDTLTPDAGRLNEQGKALTVALVAEIKKGETQDNILDRLAEAFPNMDDSILQEELARVIFLSDLVGRIEARGELA*	hallmark_hmm	common_virus	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0020	cloud	direct	high	1511	0.999	GCA_001618065.1_00297
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	11761	12138	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	11762	12139	GCA_001618065_1_19_21	GCA_001618065_1_19_21	+	13005	.	.	hypothetical protein	MNPEDIKAIFGMKPEAAVEYLKQKGVAVSWDWQDMLDDAHATAFTVAKTAGMDVANDIYHAVVKAAETGQTLEQFQKTLTPVLQSKGWWGRTPTTNPDTGEAQTAPPGNHLPDQYAVSLHGRTLR*	.	hypothetical_protein	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0021	cloud	direct	high	377	0.997	GCA_001618065.1_00298
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	12119	12649	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	12120	12650	GCA_001618065_1_19_22	GCA_001618065_1_19_22	+	13005	.	PFAM:PF04233.13	minor-capsid-component	MAGRYAEMMDSVDTHPYWQYVAINDSRTRDSHRRMHGRVYAAADPVWDTMYPPLDFRCRCRVRPLSRAAGESRALPSPTLETQTVDIGSNEYTGEARYAQRTGLRIDGKFVAPSAGFNANQGKAMLSRMASVAVQKAQSVHPDIARVALKTMMTNSKFKSSLSAVDLAWVLKLIKG*	hallmark_hmm	common_virus	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0022	cloud	direct	high	530	0.998	GCA_001618065.1_00299
GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote	cenote	CDS	12652	13002	GCA_001618065.1	LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065.1_LAEI01000038.1	GCA_001618065.1|LAEI01000038.1	GCA_001618065_1_19	GCA_001618065_1_19@C0	12653	13003	GCA_001618065_1_19_23	GCA_001618065_1_19_23	+	13005	.	PFAM:PF05069.12	Virion-morphogenesis-family	MLEINLDTSSLDRGLSQLLQNVSHPRKMMKAIATEMTSLTEENFESESFGGNRWKQSQRAAQGGQTLQLTGQLAARDLCKIALSSTAEAQNRISAVFVSNIHRFYSNIPLISLGYLI	hallmark_hmm	common_virus	C0	13006	0	13006	GCA_001618065.1|LAEI01000038.1@region_1_13006@tool_cenote_CDS_0023	.	unmatched_CDS	none	0	0	.
GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote	cenote	CDS	126587	127468	GCA_001618065.1	LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065.1_LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065_1_52	GCA_001618065_1_52@C12	1	882	GCA_001618065_1_52_120	GCA_001618065_1_52_120	+	149409	.	cd01572	Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide. QPRTase functions as a homodimer with two active sites, each formed by the C-terminal region of one subunit and the N-terminal region of the other.	MPSENNLLPLPDTLLRPMVEQALSEDLGRRGDITSAAVIAPDKTAKLFLISREDGVIAGMDLARLAFQTMDSSVRFQAEIQDGQAVRAGQTLAAVEGNARALLAAERTALNYLTHLSGIATATARAVAEVAEYGTDIVCSRKTIPLLRVLQKYAVRAGGGVNHRMGLDDAILIKDNHLAYCDSIAQAVRQAKQAVGPLTCVEIEVDTLAQLDEAIAAGAERILLDNMDDETLKEAANRCHTQTAHPHTVYCEASGGIGFDRLKRVAQTGVDGIALGYLTHSSRSLDIGLDFVA*	mmseqs_cdd	nonviral_gene	C12	8044	126587	134631	GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote_CDS_0001	persistent	direct	high	881	0.999	GCA_001618065.1_01886
GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote	cenote	CDS	127658	128608	GCA_001618065.1	LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065.1_LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065_1_52	GCA_001618065_1_52@C12	1072	2022	GCA_001618065_1_52_121	GCA_001618065_1_52_121	-	149409	.	PFAM:PF01548.16	Transposase	MYLGIDVSKLTIDCCLIADGQNHQKKFQNNKGGFEQLIKWLQSHKVTDKLHCVCEATGTYYEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKLIAQYCEDRKHKLKAWQPPAKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQKTISNLTAQIQTVKKQLLQFYKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFKNAKQFTAYLGLDPRKYQSGTSVNGKSRISKIGSSEIRKSLYMPAVVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIAFTLLQNGQDFQVERYK*	common_virus_hmm	common_virus	C12	8044	126587	134631	GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote_CDS_0002	cloud	direct	high	950	0.999	GCA_001618065.1_01887
GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote	cenote	CDS	129020	130204	GCA_001618065.1	LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065.1_LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065_1_52	GCA_001618065_1_52@C12	2434	3618	GCA_001618065_1_52_122	GCA_001618065_1_52_122	-	149409	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MLYLITGVPGSGKTLKMISDLMTRQDLKNRPLYLDGIPEVDEKIIPNLPIPEGETMQTWHKWAPTGAILVIDECQRVFRPRPSGSKVPDFVAELETHRHKGIDIFLLTQHPRLIDSNVRALVGHHCHIGKTNLGVRRMLEWERCADPTSSRDVSSAVKSVYTLDRKAFGVYKSAEEHTKIKTKLSRVVYIFPAVLALLITAGWYIYSSWNNRIDTMKAEQEKPKIEAQASSPEAVGAVAVPTANGTNAEGQYTPQTAVPEPPKPHLSEDDYKPRIEDRPETAPIYDGVNKSITAMPWPSACVKSDNGCNCYTDQGSKIAEINKKTCLSYIKDGLPFNPYKAKKTETAEVKETEQEIERPQVLSMGGKSQQNLMYDGYVEKGNEIGAQNGAKTGS*	hallmark_hmm	common_virus	C12	8044	126587	134631	GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote_CDS_0003	cloud	direct	high	1184	0.999	GCA_001618065.1_01888
GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote	cenote	CDS	130217	130495	GCA_001618065.1	LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065.1_LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065_1_52	GCA_001618065_1_52@C12	3631	3909	GCA_001618065_1_52_123	GCA_001618065_1_52_123	-	149409	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MWGKLITSVLMTVAGKVITALGLSFVSYVGLNEIQGFLLSHVQTQIGGIPSDAMNLAYIAGIGVCLNWIFGTFAFVVSLKSLSKLSASISKK*	hallmark_hmm	common_virus	C12	8044	126587	134631	GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote_CDS_0004	cloud	direct	high	278	0.996	GCA_001618065.1_01889
GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote	cenote	CDS	130498	132009	GCA_001618065.1	LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065.1_LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065_1_52	GCA_001618065_1_52@C12	3912	5423	GCA_001618065_1_52_124	GCA_001618065_1_52_124	-	149409	.	PFAM:PF05616.12	attachment-protein	MNKLIILLLVLFTSTFAVAGEINVNNSKSITYTKQHTEHWDKKPWARSVSDNSYRKFQTEAMKARYQGYLSKQTVNATFEATVSRKAVLSGAFRLVKAGAKLGLKAVPYVGTASLFYDAYQIVKPSLESEGYEYSQEQGEFIKGYPDALCLKDRAVNSCVGIDSSIIKALNKGGQSRKDAEELMRILVEKDFQKTSKIIIEDRYKGAYFQFCFYAGSGVSCQISTGTRFYYGAKNGLYSETLTEEKFLQIATPSIDGNPTPFVEGTGKPEYKENIKVPAGTVVTIGPVETPEGKKTYTVTFTNPINGGSSEASVQTNNSPAPTGNTGGSPDGNPNDKPDGKPDGNPNGKPDGKPDGNPDGKPDDKPDDRPDDRPDDRPDDKPDGKDGKDGKDGKDGKDGKDGKEAQDLCEKHPEASACKDLGDTDYKDLEIPEKAINLELKPLDVFSTNGTCPANPTFTLGVLGTFEIPYDYFCNIARLLRPILILGTIIMCGFFAFNAVKEL*	common_virus_hmm	common_virus	C12	8044	126587	134631	GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote_CDS_0005	cloud	direct	high	1511	0.999	GCA_001618065.1_01890
GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote	cenote	CDS	132002	132217	GCA_001618065.1	LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065.1_LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065_1_52	GCA_001618065_1_52@C12	5416	5631	GCA_001618065_1_52_125	GCA_001618065_1_52_125	-	149409	.	.	hypothetical protein	MMISFLILNIYGLLKRKPFNFNRKSLDDDLFIMDTNPKKPKPSDPDMVKFMSDLNKSIEKKKLDKIKVKNE*	.	hypothetical_protein	C12	8044	126587	134631	GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote_CDS_0006	cloud	direct	high	215	0.995	GCA_001618065.1_01891
GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote	cenote	CDS	132371	132460	GCA_001618065.1	LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065.1_LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065_1_52	GCA_001618065_1_52@C12	5785	5874	GCA_001618065_1_52_126	GCA_001618065_1_52_126	-	149409	.	.	hypothetical protein	MTPEVEFLIGMLPPFAVAICLYVLIRSFQ*	.	hypothetical_protein	C12	8044	126587	134631	GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote_CDS_0007	cloud	direct	moderate	89	0.989	GCA_001618065.1_01892
GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote	cenote	CDS	132457	132759	GCA_001618065.1	LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065.1_LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065_1_52	GCA_001618065_1_52@C12	5871	6173	GCA_001618065_1_52_127	GCA_001618065_1_52_127	-	149409	.	.	hypothetical protein	MGYQVGRICYETEQEAINVLMTQVSPSIDKDGVLHHAVFDGKAWKYQEQTVKLTFPQCEFGEFAQAGRELGYQLVLIMVSLFLIVIAVKVVGMISNKEEE*	.	hypothetical_protein	C12	8044	126587	134631	GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote_CDS_0008	cloud	direct	high	302	0.997	GCA_001618065.1_01893
GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote	cenote	CDS	132769	132927	GCA_001618065.1	LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065.1_LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065_1_52	GCA_001618065_1_52@C12	6183	6341	GCA_001618065_1_52_128	GCA_001618065_1_52_128	-	149409	.	PFAM:PF10389.8	major-capsid-protein	MSAPVMAEGILDTVKQEITGYKAEIIALGAIVVGISIAFAVIRIGKRGANQV*	phrogs_hmm	hypothetical_protein	C12	8044	126587	134631	GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote_CDS_0009	cloud	direct	high	158	0.994	GCA_001618065.1_01894
GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote	cenote	CDS	133076	133345	GCA_001618065.1	LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065.1_LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065_1_52	GCA_001618065_1_52@C12	6490	6759	GCA_001618065_1_52_129	GCA_001618065_1_52_129	-	149409	.	.	hypothetical protein	MSQETERRQGIFVIASFDRMFTRERKNQDGTFTKTHYVGLIIRSETETRLCEVRTKHPEKYEGYKPQQIVSMQVFPRAFKDNIYFSDEA*	.	hypothetical_protein	C12	8044	126587	134631	GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote_CDS_0010	shell	direct	high	269	0.996	GCA_001618065.1_01895
GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote	cenote	CDS	133507	134418	GCA_001618065.1	LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065.1_LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065_1_52	GCA_001618065_1_52@C12	6921	7832	GCA_001618065_1_52_130	GCA_001618065_1_52_130	-	149409	.	PFAM:PF05840.12	Rep-protein	MNRSASASAERALPCLNSNNCIETENLNKNNAKQMPIGYEKFLPNECKPEFNEFSTSHKKSSSALEMNVHQFIETFGLNHVGFLTLTFSDDVQEVKEAQRRFHSLRTNFLKKHFEHYICVYERMKSGRIHFHLIVNTREDIRRGLNFKQIQARNYTSANKALRQLWQILRENMDKYGFGRSELLPVKTNSKGLARYVAKYISKHINSRLPEDKGYRLIRTTIDKKSLWKIANSNFSFVSAGSRLWREKLQQWIICIEPYLKQYAKHEFNRELKAITEENYNRILSSLISPKWAFYNRETIINM*	rep_hall_hmm	common_virus	C12	8044	126587	134631	GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote_CDS_0011	cloud	direct	high	911	0.999	GCA_001618065.1_01896
GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote	cenote	CDS	134415	134630	GCA_001618065.1	LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065.1_LAEI01000045.1	GCA_001618065.1|LAEI01000045.1	GCA_001618065_1_52	GCA_001618065_1_52@C12	7829	8044	GCA_001618065_1_52_131	GCA_001618065_1_52_131	-	149409	.	.	hypothetical protein	MSLCYYTITPQPEKSPVAFILRLFVEKNDEPTILETKNFPIRNPNDAQSSYDEADLYGRLSCSVLMSEVQS*	.	hypothetical_protein	C12	8044	126587	134631	GCA_001618065.1|LAEI01000045.1@region_126588_134631@tool_cenote_CDS_0012	cloud	direct	high	215	0.995	GCA_001618065.1_01897
GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote	cenote	CDS	208498	209100	GCA_001618065.1	LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065.1_LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065_1_55	GCA_001618065_1_55@C15	1	603	GCA_001618065_1_55_191	GCA_001618065_1_55_191	+	248600	.	PF14014.6	Protein of unknown function (DUF4230)	MKMFGRGLVVLVLCALTAAGGWFYALHGQNEEHQVLSREGVLMQIKQMNRLESTAFYIDTIIRTEKKGDWRRLWQDSQSGIFIVRGKVLAGLDLDKLGADNVNIVDDKVLISLPAVEILSVDLENIEVYDIQTGSFNLLPMDKSVFKTVQEEARRQVLQSACKAEILEHANRQAQMQLENLFALTQTKVSVYPAAIGKCG*	hhsuite_tools	hypothetical_protein	C15	14683	208498	223181	GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote_CDS_0001	persistent	direct	high	602	0.998	GCA_001618065.1_02213
GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote	cenote	CDS	209166	210413	GCA_001618065.1	LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065.1_LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065_1_55	GCA_001618065_1_55@C15	669	1916	GCA_001618065_1_55_192	GCA_001618065_1_55_192	-	248600	.	PDB:5EMI_A	Cell-wall-hydrolase-autolysin	MVKLTRRHILRQGTGLFLTLTPVGDALAKPASPAQFLAVRIWPANAYTRVTLESNHSMKYQHFMLDNPSRLVVDIQGAEINSVLQGISSKVLSNDPFIRSIRAGQNTPNTVRIVIDLKQSTHPQVFALAPVGNFRNRLVIDLYPHGADANDPMMALLNGNVPKQRQNTNIAYDAPAPKNNRGSGGNRRPVIMIDPGHGGEDPGAIGPSGLKEKNVVLSIARETKKRLEALGYNVFMTRNEDIFIPLGVRVAKGRARNADVFVSIHADAFTSPSARGTGVYMLNTKGATSSAAKFLAQTQNNADAIGGVQTSGNPNVDNAILDMTQTATLRDSRKLGHSVLTELGKLNQLHKGRVDEANFAVLRAPDVPSILVETAFLSNPTEERLLGSESFRQQCAQAIATGIQKYINTAVLRRG*	common_virus_hmm	common_virus	C15	14683	208498	223181	GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote_CDS_0002	persistent	direct	high	1247	0.999	GCA_001618065.1_02214
GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote	cenote	CDS	210401	210871	GCA_001618065.1	LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065.1_LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065_1_55	GCA_001618065_1_55@C15	1904	2374	GCA_001618065_1_55_193	GCA_001618065_1_55_193	-	248600	.	COG0802	tRNA A37 threonylcarbamoyladenosine biosynthesis protein TsaE [Translation, ribosomal structure and biogenesis]. 	MHSNGLYTRFLPDEEATLKLGEEWSKQLSAPLTIYLEGGLGAGKTTLTRGILRGLGHTGAVKSPTYTIVESYPLDTFTLHHFDLYRFTMPEEWEDAGLDELFAPDSICLIEWPQQGGEFTPPADITITLTYTDKGRTCTFSAHTNQGRKSLESWSN*	mmseqs_cdd	nonviral_gene	C15	14683	208498	223181	GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote_CDS_0003	persistent	direct	high	470	0.998	GCA_001618065.1_02215
GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote	cenote	CDS	211043	212131	GCA_001618065.1	LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065.1_LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065_1_55	GCA_001618065_1_55@C15	2546	3634	GCA_001618065_1_55_194	GCA_001618065_1_55_194	+	248600	.	COG0077	Prephenate dehydratase [Amino acid transport and metabolism]. 	MPLSIDEQLLPHRNAIDSIDAEILRLLNERAGHAHAIGELKGTGAVYRPEREVAVLRRIQDLNRGPLPDESVTRLFREIMSECLAVERPLTIAYLGPKGTFTQQAAIKHFGHAAHTMACTTIDNCFKQVETRQADYLVAPVENSTEGSVGRTLDLLAVTALKACGEVVVRIHHNLLRKDSHEIGGITKVFAHAQALAQCNDWLGRNLPNAERIAVASNAEAARLVAESDSPNVAAIAGRIAAEIYQLSFAAECIEDEPNNTTRFLVMGHQETGRSGNDKTSLVVSAPNRAGAVTSLLQPFTELGISMTKFESRPSKSVLWEYLFFIDIEGHQSDENVQKALQLLGERASFVKVVGSYPTVVL*	mmseqs_cdd	nonviral_gene	C15	14683	208498	223181	GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote_CDS_0004	persistent	direct	high	1088	0.999	GCA_001618065.1_02216
GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote	cenote	CDS	212530	213663	GCA_001618065.1	LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065.1_LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065_1_55	GCA_001618065_1_55@C15	4033	5166	GCA_001618065_1_55_195	GCA_001618065_1_55_195	+	248600	.	PFAM:PF01139.16	tRNA-splicing-ligase	MGNYPHHVQIIADSNTWIEGNAVAQLETTARLPHMLRVAGMPDLHAGRGYPVGAAFFSDRHFYPALIGNDIGCGMAFWQTDLRAAKLKPAKLAKQLGNIDMPLDKDEQVDLLGDAVDMRQFSDGLAVGTIGGGNHFAELQTVDTVYRTDLLPTDFDENHLQLLVHSGSRGLGQQILQLHIAAFGHQGLAEEGEAAAAYLAEHQAALEFASLNRRLIAARMLDRWRSEGTCLLDVHHNFLEQTEIDGTTGWLHRKGATPTDKGLVMIPGSRGDYSYLVRPAEDCQISLNTLAHGAGRKWQRGECKGRLSHKYTADSLRQTEFGSVVVCQDKALIFEEAPQAYKSIDSVITAMKNAGLIELVARFKPVLTYKTGGECGA*	phrogs_hmm	nonviral_gene	C15	14683	208498	223181	GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote_CDS_0005	persistent	direct	high	1133	0.999	GCA_001618065.1_02217
GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote	cenote	CDS	213666	214274	GCA_001618065.1	LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065.1_LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065_1_55	GCA_001618065_1_55@C15	5169	5777	GCA_001618065_1_55_196	GCA_001618065_1_55_196	+	248600	.	TIGR03072	putative peptide chain release factor H. Members of this protein family are bacterial proteins homologous to peptide chain release factors 1 (RF-1, product of the prfA gene), and 2 (RF-2, product of the prfB gene). The member from Escherichia coli K-12, designated prfH, appears to be a pseudogene. This class I release factor is always found as the downstream gene of a two-gene operon. [Protein synthesis, Translation factors]	MKQNTPAIYLQISTAQGPAECRIFARFVLGKLLAEAQAKGIDAELVTETSDKHGILSATLKLEGQKAESLAQAWQGTLQWICPSPIRPKHPRKNWYIGVFRLPDMPQMYEMPSENGIEFQTCRSGGKGGQHVNKTESAVRATHKESGISVRVESERSQHANKKLAVMLLAQKLAEHHAGQVGNFAQEQHAQLYQVERGNPKR*	mmseqs_cdd	nonviral_gene	C15	14683	208498	223181	GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote_CDS_0006	persistent	direct	high	608	0.998	GCA_001618065.1_02218
GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote	cenote	CDS	214410	215366	GCA_001618065.1	LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065.1_LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065_1_55	GCA_001618065_1_55@C15	5913	6869	GCA_001618065_1_55_197	GCA_001618065_1_55_197	-	248600	.	PFAM:PF01548.16	Transposase	MNVIGLDISKDTIDATLITVKGGQDYIKIANNTEGFENLINWIKTKRIRKIAISMEATGIYYEQAAEYLNALYTVYVINPLKIKEYAKSQFSHTKTDKADSKLIAEFANRHLDKLTPFRPSENPILYKLVNLLQQLKEQQKETQNRLHTAKDIYIKSTHEAIIELLEEKIDQTSKRIEGMIKQKESLNIEYQNLQTIPAIGKETAVILLRHLTDKNFETANKFVAFAGLSPKIEQSGTSVNKKGRLSRYGHRQLKRALFMPALVAYRMNAFPQLVRNLEAAKKPKMIIIVALMRKLAKIAFYIHKTKKPFDKARHQTV*	common_virus_hmm	common_virus	C15	14683	208498	223181	GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote_CDS_0007	shell	direct	high	956	0.999	GCA_001618065.1_02219
GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote	cenote	CDS	215664	216821	GCA_001618065.1	LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065.1_LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065_1_55	GCA_001618065_1_55@C15	7167	8324	GCA_001618065_1_55_198	GCA_001618065_1_55_198	-	248600	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MIILQTGVPGSGKTSSVVNMLMTDESYTHFTDKDGVKKKRPLFVNGIPELKIEHEELTDEQIKEKPFQDFLPYGSLVIIDEAQRLMGTRSAASKVPPFIEALALHRHHGLDIVLITQHPSFLDSFVRKLVQRHMHVSIKPVGRKLYEWNECVDQPDSSVNIARAIERTFVVPKKSFGMYKSAEVHTKPKRRIPKSLIFVALFLPLLIGFAVYTINGMSKRFNQEEKQQTAALTSSDTTDEVTTPENSTPPQQTMNSSLKPEDFVPVLAEKPESKPIYNNVRQVKTFEYPVGCVDGGKSGCTCYSSQGTQLKEITKAMCKDYVKNGLPFNPYKDEQQEAQQQQTAYEPEKGKVLTMGGKSPQNLMYDGYVEAGETTGFQNGAKVGS*	hallmark_hmm	common_virus	C15	14683	208498	223181	GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote_CDS_0008	cloud	direct	high	1157	0.999	GCA_001618065.1_02220
GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote	cenote	CDS	216818	217111	GCA_001618065.1	LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065.1_LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065_1_55	GCA_001618065_1_55@C15	8321	8614	GCA_001618065_1_55_199	GCA_001618065_1_55_199	-	248600	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MKAAFFAILQRLLTYIVAKVFIALGISFVTYTGFTVGLGFIKDYVKNQFNSMPSDILQIVMMAGFGHALGLIFGAFAFNVAMQSISKLSFIPGGKAK*	hallmark_hmm	common_virus	C15	14683	208498	223181	GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote_CDS_0009	cloud	direct	high	293	0.997	GCA_001618065.1_02221
GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote	cenote	CDS	217115	218647	GCA_001618065.1	LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065.1_LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065_1_55	GCA_001618065_1_55@C15	8618	10150	GCA_001618065_1_55_200	GCA_001618065_1_55_200	-	248600	.	PFAM:PF05616.12	attachment-protein	MGKLYFNQNQLIRLIILILMSFLVKNSYAEWKAGPPFPGSNGTVRPLYDSSKVNLNPNTMYKTDTGHYGFKTTISQTIEHVPTGATRAGVPTIFEAQVSRKAVLSGAFNLVKRGAALGTRLSGWGTAAYFAYEAYQAVKSPLDSEGYEYKKESNEFYKLFNDSLCYSNSRTHIDSCIGVDSSVIKALEKSGDSQKSARNLLEMQVSTEFQKILPNIIEKTPAYKGAFFKTCEFFDPGVSCLISTGTRFYYAPKHGFRSEVLTEEKFLQIATPSIDSNPTPFVEGTGKPEYKEKVSVPAGTVVTIGPVTPENGKPVQITITFGQDSNGNTTANVATTQRPDLTPGGSEAPNTKPDPDPAPNPDGKPDKKPDDKPDSDDKPDKRPDDKPDPDDDPSNKDKRKEDKKDDKKEESKGLLCNIFPDILACSEKGDVEEQEEPFKIPHTNNDTTFSPDFFLPDNGVCPAPRTATYLGITMEFKYDMICNFAEMIRFLVIGIAAVAAAYIMFSSRKD*	common_virus_hmm	common_virus	C15	14683	208498	223181	GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote_CDS_0010	cloud	direct	high	1532	0.999	GCA_001618065.1_02222
GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote	cenote	CDS	219010	219288	GCA_001618065.1	LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065.1_LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065_1_55	GCA_001618065_1_55@C15	10513	10791	GCA_001618065_1_55_201	GCA_001618065_1_55_201	-	248600	.	.	hypothetical protein	MGYQVGNNCYATRQDAENVYFSLVPPKIGDDGKLYQLNFTKFGWKYGEQILKAELPECNPIDSMKDGSYIGWSVVAIMAAVWGIRLIWQKLR*	.	hypothetical_protein	C15	14683	208498	223181	GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote_CDS_0011	cloud	direct	high	278	0.996	GCA_001618065.1_02223
GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote	cenote	CDS	219355	219573	GCA_001618065.1	LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065.1_LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065_1_55	GCA_001618065_1_55@C15	10858	11076	GCA_001618065_1_55_202	GCA_001618065_1_55_202	-	248600	.	PFAM:PF10389.8	coat-protein-B	MKLMNTCRKYGAKLAVVAAAPLAFATQAWAEVPESVKTDLATAKTDALSVAAIVLGIIASIFAIQLIRRVLR*	hallmark_hmm	common_virus	C15	14683	208498	223181	GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote_CDS_0012	cloud	direct	high	218	0.995	GCA_001618065.1_02224
GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote	cenote	CDS	219659	219862	GCA_001618065.1	LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065.1_LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065_1_55	GCA_001618065_1_55@C15	11162	11365	GCA_001618065_1_55_203	GCA_001618065_1_55_203	-	248600	.	.	hypothetical protein	MSKYQQKFIVQELENHEFIYPDPFGDIGFTPNIKSAGQYESYEDAFNSAIEEIGGEFLIFSFYTKED*	.	hypothetical_protein	C15	14683	208498	223181	GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote_CDS_0013	shell	direct	high	203	0.995	GCA_001618065.1_02225
GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote	cenote	CDS	219876	220187	GCA_001618065.1	LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065.1_LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065_1_55	GCA_001618065_1_55@C15	11379	11690	GCA_001618065_1_55_204	GCA_001618065_1_55_204	-	248600	.	PFAM:PF07459.10	RstB-protein	MFEQSQVITYSATLLGAKQFKGEIDGNKIDSCTVLVASPMPANGNAVGFTAASMKFGDSHNFDKLKNLKFPCAVDVTVAMESTGKGLVPKLLDFQVKGATPKA*	common_virus_hmm	common_virus	C15	14683	208498	223181	GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote_CDS_0014	shell	direct	high	311	0.997	GCA_001618065.1_02226
GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote	cenote	CDS	220208	221542	GCA_001618065.1	LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065.1_LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065_1_55	GCA_001618065_1_55@C15	11711	13045	GCA_001618065_1_55_205	GCA_001618065_1_55_205	-	248600	.	PFAM:PF02486.18	Replication-initiation-factor	MKALEYKAVAVGADMAAAPADGKAATTAEGCPPRLIGGEQNKTPNPKGAEKSDNQDFEFEYFSHFVSDGKGKFIEIPLRRGRDDGAFIDQITFTIHEDSLPKVTGKGLVSDTEFVVKYSELLEEILGFGITQKLPFKGKFFYKSCYQLGPDNVEYGKVHYGGQRETMLVELNGTGCQAAIPGWENRLYEFLSKCIRPKITRVDVAHDFFNGEYTPDQALLDHDNGHFDVHNMRPKSECRGTAWRNDDGSGKTFYVGKRGNSKFTRVYEKGKQFGDVNSPWVRFETEFRAGDIEIPLDVLLYSGSYLGGAYPICTAIFKTEAKRMDAKTETVNLSFDHKLFHARNQVGKMVNFLRDIGWDDTKIVDELVKGIEGYPKGLQPEQYDCRDQTQKIQYIHEEQKAIDDLNMQTLLDDLLDEKETAFPQDREKHTLKTSNSKRKLFQIF*	rep_hall_hmm	common_virus	C15	14683	208498	223181	GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote_CDS_0015	shell	direct	high	1334	0.999	GCA_001618065.1_02227
GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote	cenote	CDS	221523	221753	GCA_001618065.1	LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065.1_LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065_1_55	GCA_001618065_1_55@C15	13026	13256	GCA_001618065_1_55_206	GCA_001618065_1_55_206	-	248600	.	.	hypothetical protein	MFIFYTVNPEPLSFPKAYILKVFRDKDNESQCIKTVCFPIRNPTLKQKTENEAYECGRLFVKELMDKECNRESLGI*	.	hypothetical_protein	C15	14683	208498	223181	GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote_CDS_0016	shell	direct	high	230	0.996	GCA_001618065.1_02228
GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote	cenote	CDS	221951	223180	GCA_001618065.1	LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065.1_LAEI01000041.1	GCA_001618065.1|LAEI01000041.1	GCA_001618065_1_55	GCA_001618065_1_55@C15	13454	14683	GCA_001618065_1_55_207	GCA_001618065_1_55_207	-	248600	.	TIGR01843	type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking]	MSRENNVKSKDLHLINDLNAALQKEKHSGQFWVIILFFLFLVVFVVWAYNSPVEEVTRGNGNIIPSSREQVIQSLDPGIVTEIMVKEGDMVEKDQILMKLDDTRSSAVLRESEAKVENLEATVARLKAEAYGTKLSFPDSVGPELRRREIAAYKARRQAMTDAVSGLSQSKAALDREIAITAPMVAEGVVSEVELLRMRRDSADLATQISERRNRYKADANNELLQAESELAQSKENVAMRADPVERSQIRAPMRGIVKGIKVTTIGGVVNAGEDIMQIVPVDDKLLVEAYIRPQDIAFIRAGQPALVKVSAYDYSIYGGLEGKVTLVGADTVSNSMQNRANDLKLDPNQVYYRVLVQTENNSLKDKNGKPMPIIPGMVATVDIKTGEKTIFQYLIKPITRMKQALSER*	mmseqs_cdd	nonviral_gene	C15	14683	208498	223181	GCA_001618065.1|LAEI01000041.1@region_208499_223181@tool_cenote_CDS_0017	persistent	direct	high	1229	0.999	GCA_001618065.1_02229