core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	38559	38810	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	1	252	GCA_001656255_1_23_31	GCA_001656255_1_23_31	+	200239	.	PF16793.5	RepB DNA-primase from phage plasmid	MNDYMISQKFKRFQEILLSDKAIHDLARVMRLPGFIHQKTKNGVTTDAFTSRVVYVGKRYDKVDLMAWLATMDVVVEQNTPLF*	hhsuite_tools	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0001	cloud	direct	high	251	0.996	GCA_001656255.1_01146
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	38923	40635	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	365	2077	GCA_001656255_1_23_32	GCA_001656255_1_23_32	+	200239	.	.	hypothetical protein	MVAISHARIVAVVIALDLIIIISKQVMAVGYAVKVWAKRLGAMVGAVWLANVAKNSALVASFVSLTGATVASTKASIANAFSVQGQITAYNALSTRLMLLRLTKAHYIDLTKTAIATTAVYARSLVGLATSFNTATASARLHTLALAGVTTAKRSAMGVGILATRAITGLGGAFMTLGRIITAHPIIAIGAVLASVVVSTHGVTGALESLSDAFGVATLMTKDFITFIGNGFSMAWDIVSNFADNMLAKVGDTTKGSTGAFSNFFATSHGGFVGMLQVAAKTFDLINAAAKAGAKNALHNFVQLGKTTKNIFLGMGNAFVSIIEMMINNAARKIDFLSTKANSMAKVLGIEASIPLIGTVSLGRLQYDNVDFGAVASIADNNTNSAYDYVTKLADKATQATKANASLADSYNSVGSAATNAANATKNASDKTKKTADDITDAINELDALVAKLHHESHQLLNNSLSEMIFETDNKLGKFYGATEAQKQKLKDLAGQKDLYTATKKANDELKSLARTIKLVGKQTPFDELRNDLFDVRHEMSVLNDETKNNLLLWAAHTKTCHLAEVAGLS*	.	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0002	shell	direct	moderate	1634	0.954	GCA_001656255.1_01147
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	40769	41206	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	2211	2648	GCA_001656255_1_23_33	GCA_001656255_1_23_33	+	200239	.	6AF2_D	HIT domain-containing protein	MFQLHPTLAKDTFLVGDFPLSTVRLMNDCQFPWLILVPRVSGIKEIYELSVADQIQFLRESSWVSSQMAKIFGADKMNVAALGNQVSQLHFHHIVRYQNDAAWPNPVWGHEAMPYTQEVLSHMQQTLMMALRGHHQMPFDWKMDV*	hhsuite_tools	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0003	persistent	direct	high	437	0.998	GCA_001656255.1_01148
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	41361	42023	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	2803	3465	GCA_001656255_1_23_34	GCA_001656255_1_23_34	+	200239	.	COG0352	Thiamine monophosphate synthase [Coenzyme transport and metabolism]. 	MTLQSIDKVPKLYLLTNDDELSTLLDKLERVFDTGAVSLLQVRRKSTLKLYDLATVYREAEMIVSLASDYDIDVVMNDNLELASHFGTGLHLGQRDGSVRVAREILGDDVVIGRTCHTDIALFKEAKREGATYGAMGTAFASITKPRAKIISKDILKKACEFDFPLCVIGGITLENIHQLRDELNGAPIDYIAVTADIMGHSVDTIADKCLAWQQKLNTW*	mmseqs_cdd	nonviral_gene	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0004	persistent	direct	high	662	0.998	GCA_001656255.1_01149
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	42025	45582	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	3467	7024	GCA_001656255_1_23_35	GCA_001656255_1_23_35	+	200239	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MMIDTLKPKLNLPTKANFKTTLPLLGGADLSFWLALAAKSEERLIVMIANHQNELNQLDTELSFFGIDAHVFPDWEILAYDQLSVHQDIVSERIALLTRMPTTGVLLVSTQTLMQRIAPPSWLIGQHFDLAVGDKFDINEQRLRLTKAGYVQTENVFEPGEFAVRGSIVDIFAVGQSLPFRLDLFDDDIETIKFFDPDSQRTLSDNDLAQLKKDAQAGMNTHHAQKLPSSAKITEFRLLPAREFPLEEGKEMFRQNFASLFPNASARKIEFYNDVMAAIAPQGIEFYAPLFFELDAWMKTGNLFSYLPDDTLVVSHDNLSACHDEYYQQIQARHHSRAHDKSLPIMPPDYLFLANNEFHQALKAYPRVVINTNHDTAKIGAIASLPPPILPINHQAAEPLSELLSFIKSGQVPILLVAESAGRREIILELLKDKVAVKVVDNYQEFINNLDDFNADCIALSVAPIERGLWLRDETGGLCIISETQIFGRQVLQTRRRRQSSVSQAFLIKSVTELTEGALVVHLEHGIGRYQGLVVLDVGEGEQEFIHLKYADDASIYVPITNLALIGRYSGSDLQTVSLSKIGSGKWEKAKLKALEQIHDVAAELLNVQARRNAKSGISFDIDMSQYELFASQFAFEETIDQAEAIHAVMHDMKQNKPMDRLICGDVGFGKTEVAMRAAFIAVQAGYQVAVLVPTTLLAGQHEDSFLNRFADWPIKIESLSRFGNKKHQDAILAGLADGTVDIVIGTHKLIQDDVKFKQLGLMIIDEEHRFGVRHKERIKAIQTNIDSLSMTATPIPRTLNMALSGMQDISIIATPPARRLAIKTFLLPKSDETVKEAILREILRGGQVYYLHNDVASIEAAADTLRELVGEARVAVAHGQMNERELSAVMNDFYHKKFNVLVASTIIETGIDVPNANTIIIHRADKFGIAQLHQLRGRVGRSHHQAYCYLMVPSLKGLSSDAKKRLNAITRANTLGAGFMLASEDLEIRGAGEILGKEQSGNMQTIGFGLYMDMLERATNAIKQGKTPSLATPLDLVSDIDIHASALIPDEYLGDVHERLVFYKRISSLDDVNQLIDIRTEMIDRFGTLPTQTQNLFAVHRIRIRAKALGITKIDATQSTISVEFRADTPIDGLAIIKLIQSNDGYRMNGATAIRYTSQELMDTQARIDKVNELLLYFESAKTA*	common_virus_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0005	persistent	direct	high	3554	0.999	GCA_001656255.1_01150
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	45848	47110	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	7290	8552	GCA_001656255_1_23_36	GCA_001656255_1_23_36	-	200239	.	TIGR02800	tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MKSPITKVCLALTISFAAALTHAYADDELIVISEQVAQSRYPVAVMPFSEAHQMSHYLSLAGLGATHQNLPQHTQTNHDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEIIDTANGSVSVKHTQISDNHPASIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNKISSLKLIDPNGQLIRTLDTVNGSIITPTFSPDGLSIAYSVQTKNNLPIIYIVPVSGGTPKLVTPFWGHNLAPSFSPDGGSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPNYLADASGFIYTADKGTRRQSLYRYDFGTTHSTQIASYATNPRLSPDGSKLVYLSGGQIIIANTKGRIQQSFRVLGTDVSASFSPSGTRIIYTSNQGNKNQLMIRSLSSNTIRTVATSGTVRDPIWSK*	mmseqs_cdd	nonviral_gene	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0006	persistent	direct	high	1262	0.999	GCA_001656255.1_01151
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	47127	47921	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	8569	9363	GCA_001656255_1_23_37	GCA_001656255_1_23_37	-	200239	.	PF06519.11	TolA C-terminal	MRSSDNHPTVNFDKSALILPILASVLLHTVIIIAVAAPLITPPTKPNTAIQTALVGQEAFNSAKTALSNHHANQNTPTAANASSTITANDNAFMQAQNQHRYRPQVSTSATTTQAYHPLPNSAPFESNSPNIQNQPTNAHAKLAKYSNNDSGLEQANHTESTPSRAQINAAISSVKHRIETIWQRYPKQPNQTITFQVNINQQGDVTSIQFGGGHPDLRESVEAAVYAAAPFYELGGMRDSIRLQFTTEQLIMDNSQTPNEPNH*	hhsuite_tools	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0007	persistent	direct	high	794	0.999	GCA_001656255.1_01152
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	47952	48386	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	9394	9828	GCA_001656255_1_23_38	GCA_001656255_1_23_38	-	200239	.	TIGR02801	TolR protein. The model describes the inner membrane protein TolR, part of the TolR/TolQ complex that transduces energy from the proton-motive force, through TolA, to an outer membrane complex made up of TolB and Pal (peptidoglycan-associated lipoprotein). The complex is required to maintain outer membrane integrity, and defects may cause a defect in the import of some organic compounds in addition to the resulting morphologic. While several gene pairs homologous to talR and tolQ may be found in a single genome, but the scope of this model is set to favor finding only bone fide TolR, supported by operon structure as well as by score. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MATSNRFARRQRLLNSDMNVVPYIDVMLVLLVIFIVTAPMLATGVEVSLPKEQTKPITQADKLPVIVSIQSDGNLYVSHKNAIDVPITPDKLDALLRQMHQDNANLQVMVNADADNAYSQIMHIMALIQNVGITQVSLLSESVQ*	mmseqs_cdd	nonviral_gene	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0008	persistent	direct	high	434	0.998	GCA_001656255.1_01153
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	48409	49098	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	9851	10540	GCA_001656255_1_23_39	GCA_001656255_1_23_39	-	200239	.	TIGR02796	TolQ protein. TolQ is one of the essential components of the Tol-Pal system. Together with TolR, it harnesses protonmotive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this model describes specificially TolQ per se, as found in tol-pal operons. A close homolog, excluded from this model, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MNESISLISLVIEASIVVKLVMAILLLLSTISWVLIFHLGAKIGGVAKFDERFEQWFWTDDIDRQLSVVQAESERVGLELIFYTGFYDQNHTNQDFVLSDDKKVQMVERRLRMALGGEQVRLEKGLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQAESVGLATVAPSIAEALIATALGLFAAIPATMAYNHFTAKSNTLYENRSLFCEGLMSALVTNLAKKNTASTL*	mmseqs_cdd	nonviral_gene	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0009	persistent	direct	high	689	0.999	GCA_001656255.1_01154
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	49374	53546	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	10816	14988	GCA_001656255_1_23_40	GCA_001656255_1_23_40	+	200239	.	PDB:5XDR_A	Replicative-polyprotein	MHSTDNLPVLAKDRHYLNKLKQKVDYTTGDLKAKCKIRYDAIYKRSAEQVANRMDSIPKNLSEKLNHDLPVTAEADTLIQAIREHQVVIIAGETGSGKTTQLPKLAMMAGRGVTGQIGHTQPRRLAARSVAMRIAEELGETLGQTVSFKIRFAEEGGKYSIVKLMTDGILLAELGSDKFLANYDTIIIDEAHERSLNIDFIMGYLKRLLPKRPDLKVIITSATLDTQRFSDYFSVHGKPAPVYIVEGRSYPVEVHYRPLTDTIVSSQDDDAFDDIEDNLPRALTAAVNECFEDARAKGHPDQADILIFAATEAEIRELQEVLMLYAPAHTEILPLFARQSYGEQQKIFAPSGKGRRIIIATNVAETALTVPNIRYVIDLGFARISRYNYRSRIQRLPIEAISQAAANQRKGRCGRVASGVCIRLYSEEDFNSRPEFTEPEILRTNLASVILQMERLQLGDVNDFDFITPPDLRLVNDGRKLLIELGALDDKSFTKTRAKKGRTQLSGLTKIGQQMAKMPIDPRLARMLVAGDTFDCLADILIIVSALAVQDVRERPINKQAQADQKHALFRKEDSDFLFYLELFAALFDQHSTNDNQVLGSNARRNFAKKHYLSYARIREWQKTHRQLSEMMAEMGFEINKQKNHQNGVKTDTKKGTRLSLKPGASHQKSIKQALVGAKALKNEIDHKTSIHYANIHRALLSALLSFVAHKTDTVGEYLMARSQKARIFPASTLHKKGAQWVMAFEVVETSQVYMRTLAKIEPEWIIKAAPNLLKYHYFEPHWSKKAGRVRAYAQISLFGLIVIAKELVNFEQIDLVQAREIFIRDALVANQYGMQMKFLADNANKIKDIERIEDKLRRRDLLVDEERLYQFYDAKIPNHIASRKSFEEFYHDAENKTPNFLHFSDEDVLNESVDDNREFPESWHLGGVRLPLSYVFDPAADDDGVTVRVPIKALAQVDPVALLWGISGWRYELVLQLLKTLPKEIRRQIVPIPDTCQKIFPQLDASLKMGLLDQLVAALKTLGVQTQAQDFAPDKVEDYLRPLICVVDDKNRVIEKSRDLPKLQARHRKTSVQSIAVEQGVHHHFPNHFNFVKNKHTSGIVMQEFSALKADKTQSTVFIATFTEINAALAEHKKGVLTLIKGRLGAKQKQLTGQIDKAFKLAFAPLGDLEKLKNIVVHATLEACLYEYGQDFDHKPVSQNGDHARAAIAGLVTQNNQWLISHLPLDEREFEYCQDLILKNFLLVGQEILRSLKEIYTAWQTARGKLLMLDQEIFGENIEDIEDQLDDLQLANFVYQTDYRHWRQYPRYLQALNIRLDRLQHNLEADLDAVYLLDTHMERLARCVKNPKFAEYRWLVEEYRINLFAQPMKTVQPVSAKRLETLWANLTTQ*	common_virus_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0010	persistent	direct	high	4172	1.0	GCA_001656255.1_01155
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	53809	55305	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	15251	16747	GCA_001656255_1_23_41	GCA_001656255_1_23_41	+	200239	.	4K7R_A	Cation efflux system protein CusC	MSIKCQLVAIDNIIKPCYDRILNFVYFSTMKMPYFLLLGLLLVQQADADYSLLDAQKQLMSSSPAIQASHALYQADVLQAESLQKLHYPRISLNAHAFALQQNSNIPLDNIKEQTAQHINTHFDHRFGNAPDGLLDALHNSTQTALDRLPDHQDVKLRHDGITPNITATMPIYTGGLISNSKNIANLQAQRGKFGLQERISLAKLNLIRHYFNVQLQKQLTDTQQNTLSAMQLHVDNAYKLEQQGFISRGQRMQFEVARNQVQRLYQNTQNQHQNSIYELAVLLGLPHIEPLSTPLFINTQHRPNWQALLKDSQNTPLNQKLKTDILLADENIALRQSTKKPKIAAVARYTLDNKPDWFAGVAVQYNLLSGIDRDKQIEAAHLQKQAAKLGHEQVNEHITTTMHTAYGEMVLAQKTHALLQQNHQAAKENLRIQTLSFQEGFGTVAGVVDAQSALSQIDSETALNAYRYLLALATLLHHTGTIDDFDDYLSLDDAHKL*	hhsuite_tools	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0011	persistent	direct	high	1496	0.999	GCA_001656255.1_01156
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	55352	56551	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	16794	17993	GCA_001656255_1_23_42	GCA_001656255_1_23_42	+	200239	.	COG1566	Multidrug resistance efflux pump [Defense mechanisms]. 	MTDKTDDVKPDTDGNHPKKQKPHTQAKSKPRPLALFLLLALIGSVLLVIIFGLIQSYGTPQNLPTANAIGSTNEPPKGVIAHVRQKITKPATFSIQGRVEGETVNISTKLPSRVAAIYVKEGQAVRTGEPLVQLISPEIDAKKQQAAAMLQSALAFQSSTDRGTRQENVDTLYANWQSAKAQATLAEESYRRGEYLYQEGVISRQRRDEMRAAKQSSAQIAHAAQQQYLKAERGRTDELKSSADAQVQIARAAVAEADALDAETMLYAPIDGTVSKIYIQSSELVMPAVPVMSLLDNHPTITISVQENQYSHVHALPKLTGFIPALNKTADFKIVHTEDEGEFATIKNTRQTGGYDIHSFKTKLEPITPIEGLNKLEPITPIEGLKVGMSVIFDITVLP*	mmseqs_cdd	nonviral_gene	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0012	persistent	direct	high	1199	0.999	GCA_001656255.1_01157
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	56579	57757	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	18021	19199	GCA_001656255_1_23_43	GCA_001656255_1_23_43	+	200239	.	PF12698.7	ABC-2 family transporter protein	MIVRFIRAFCQAFLRELNRLSCNRFDLAMVMIAPFVIIVLFGAMFYHGKAHHLPVALVDEDNSELSHLIYQHIHHNETVEAVLILDDIQDAHHAINRLDVGGYIHIPKDAQNRLVRGENTGIHIAYNQSFFSIGSAISSALSKSTKGGIAKFIQTKHLTGVLPHLSGNMPHVKISVLFNPNLSYEFFLEPFLVAAVLHLLLCCLVAHAIGQEFHEYSIHEWLYHSPFGALFGKISVYVLIISLWHGLWQAWLIGVRGWFVAGSLFVLIIGQLLFYLAYALFGAMVVLKTQNINKSYGILAVYGGSSMSFAGVTLPLNNASGFTQFWSQIIPFTPFARLQVEQWVIGSPFIITLAHLNSLLIFVLIFAIGSLLLLRRIKKTLIAMPNTPKDDS*	hhsuite_tools	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0013	persistent	direct	high	1178	0.999	GCA_001656255.1_01158
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	57757	58857	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	19199	20299	GCA_001656255_1_23_44	GCA_001656255_1_23_44	+	200239	.	COG0842	ABC-type multidrug transport system, permease component [Defense mechanisms]. 	MRRFIKQYLTIWLDVIKDRSIFLTMVLSVVFYGFFYPFAYQAQRPADLPIVIVDEEQSPLTQAIIHTTSHTPNIHVLAVVSDFRQAQMLVQSAKADGILLLPDNLSQSIHHGQTGGVGLYLSSAYFLRTQNIGAGLASSLQATIIQELGQVTQTRHKPMPELIHQSALFNPLSGYGSYIFPAVAPIIVYQTIVLGLAMLVAGYRQRLWRASACDFLAIYAVALTIGCLSCFYLFGFVFWWHDYPRGGNFWGMMLGVPIFVSCAIGVALLIASWVADGAKVGVLLIFSSVPLFMLTGLAYPLMAMPKFLQPLANALPTTQGVQMFIQLNQMGVPIQDVWQKMAYLASVAVLCLGAAFWRLRLVNKSV*	mmseqs_cdd	nonviral_gene	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0014	persistent	direct	high	1100	0.999	GCA_001656255.1_01159
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	59547	59906	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	20989	21348	GCA_001656255_1_23_45	GCA_001656255_1_23_45	-	200239	.	CDD:cd08053	Head-Tail-Connector-Protein	MITLDDLTDIDKADEQTVVIVNAWLNKHKLIPFKTIPEPIKQAGRYIAKAWLDGDLFATRTEGQVISKSSKAGDVSVSKTYADGQMGQAMSQNEQIALALIEPYLQQPLGMFGLPLVRG*	hallmark_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0015	shell	direct	high	359	0.997	GCA_001656255.1_01160
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	59966	60169	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	21408	21611	GCA_001656255_1_23_46	GCA_001656255_1_23_46	-	200239	.	.	hypothetical protein	MSLPKDKVKPAFNFTYPSERAYFDESKSTLTNAQVTDPAKSGADYGIKDPQVTEALTGTKSETAKVE*	.	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0016	shell	direct	high	203	0.995	GCA_001656255.1_01161
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	60180	61196	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	21622	22638	GCA_001656255_1_23_47	GCA_001656255_1_23_47	-	200239	.	PDB:6R3A_A	Major-Capsid-Protein	MAKLREIFNKNVTLSYQVKDNLQRSKFWQSGAFVSDARLRPLLTSGSLTFDVPFIHPIDGNLEANYSNTIMTDIAMPRSIEGSKSKGRLAVLNEGFIESRLESYLTGQSPLKLMAQMIDDYWLAQAENRAIATLFGLLNYDQSNGKKLSTDISKATADDSSGFDVNAFIDAEGSLDEMHQGSGLMIVHPLIATKMRKQRLLERVTTADDLKPIDMYNGRRLIQSKRATVIGTGKNAKYVSYLLGAGAFAADMVAGHDDLELERTANTGNGSGHTTLWTRRNILIHPQGFSFIGEPSTLTGGTKNEALSPSWTDLTTAANWRLDADADATPIRFLITNL*	hallmark_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0017	shell	direct	high	1016	0.999	GCA_001656255.1_01162
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	61200	61847	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	22642	23289	GCA_001656255_1_23_48	GCA_001656255_1_23_48	-	200239	.	PFAM:PF06810.10	minor-structural-protein-	MSDNTQENPTTVLSGDTENQITQEQYNELQAEVDRLRKHSETLLAEKKQQSEQRRAEQAEKERLAEETARKKGDFETLEKQYQAKIQELNEQITKRDAERDENLVKSHAQKLSSQLSDNPANQEILQILIEKRLSAKDGQLSVLDDSGAVSIMTLDDLAKQIQNCGKYDSLIIGTKSCGTGSNGQSAKRAGDYSEQERLALANSNPALFNQLFLE*	hallmark_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0018	shell	direct	high	647	0.998	GCA_001656255.1_01163
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	61877	61972	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	23319	23414	GCA_001656255_1_23_49	GCA_001656255_1_23_49	-	200239	.	.	hypothetical protein	MEMKRFLILVGLVAFGLLLFALPNIITAIKA*	.	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0019	.	unmatched_CDS	none	0	0	.
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	62147	62476	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	23589	23918	GCA_001656255_1_23_50	GCA_001656255_1_23_50	-	200239	.	.	hypothetical protein	MDYDERDITTYDFLFDLSDDDKKLLIKYTEFRLNKSFSSINQWENWLSEHLKQSHFEFILKLYCFSDIDYYDVPFDYPTIDEVQKLVTDKSNDVEMMTNVWIELLRKYY*	.	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0020	cloud	direct	high	329	0.997	GCA_001656255.1_01164
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	62452	63987	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	23894	25429	GCA_001656255_1_23_51	GCA_001656255_1_23_51	-	200239	.	PFAM:PF06152.10	minor-capsid-protein	MKTLINLERLKTQLANDFKISIEEILAFLQRVVFNEELSDLSQKQVKVLIRRTDSKLATIFGAFAYNLKSSWQELFYHRYKVDAPKDIKALQKHADEIFKKPLQLDGKMGITLDELLDAFTETERKKITNAIRLAHHDGLPNAKLVQMIRGSRARNYQDGILAITTRHAKTIAHTGTAIVASQAKQQFIHDNKDIIKGIKVIATLDLRTSGICRGLDGVFMPLDKARYPPYHFNCRTSFEIVYDDYTAPKQRASMDGVVKNQSYYEWLKNQPAQYQDEVLGKTRGKLFRDGGLTVERFRALQLDKHFTPLTLEQMRALEPRAFKKAFGEKILGIQNHPFYRRAKKKFDELKPIGEKFGLSDNELFSISAYTSAHGFVQSYFLKPTKFKNKDPKGYADIEEQINHMLKGLNKLPNYQGQVVRRVSLYDDLKNLKVGDVYQSPAFMSSAIIGESDVFSHYRVRMLIKVKTGKRIDMLAVKPEQREVLILPKTSFKIEKIQQKGDELWITMSEI*	hallmark_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0021	cloud	direct	high	1535	0.999	GCA_001656255.1_01165
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	63999	65360	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	25441	26802	GCA_001656255_1_23_52	GCA_001656255_1_23_52	-	200239	.	PDB:7Z4W_L	Portal-Protein	MIEDCYHGQDAITKKGEIYLPNPSPIDENEAVKVQRYIDYQKRAVFYNVTKRTANAMAGMVFAKYPTLDIDPALEFLKTAVDGGALSFVGQARQAFLMMLLKGRGGLLVDYPLVKHGQYLPTKKDVSDDNLRPKIRLFDPQSIINWRVQMVNNTRKLTLLVLKENYIEQDDGFKVQTGEQILVYRLIDKQVWCAIYQKHGTWQQIQNEPIRGVHEIPFVFFGANDNDESIDDAPLYDLAVLNLAHYRNSADYEEGNFIAGQPSLFITGLTKEWVTDIVNQGNPIRLGARTANILGSGANAFLLQSNANSGLYEAMQNKKEQMVALGARLIEPKGGTKTATEAQSDKADETSIIAHLANNLSDAYSRAFNYCGQFLGIKHISTVVFNTKFDANKMTADERRQLIAEWQTGAITFSEMRARLVDDEIAFIEDDELAKAEIDSDLGEITDHIDDEP*	hallmark_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0022	shell	direct	high	1361	0.999	GCA_001656255.1_01166
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	65413	66885	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	26855	28327	GCA_001656255_1_23_53	GCA_001656255_1_23_53	-	200239	.	PDB:2O0J_A	Large-Terminase	MFDKLKDPLYRLNHLYYITDKSGRKVKFNMTAEQYDYFKHEHSRNIILKARQLGFTTQVCIMQLDSALFESKKCALIAHTLHDAKRLFREKVKFAYDNLPELVRLANPIKIETKEEMVFENGGSVTVSTSFRGGTLQRLHVSEFGKICAKYPDKAREIVTGAFEAVPLDGIATLESTAEGRQGYFFEYCQTAQKDQLSHKDLTAQDWRFFFFAWHQNAKYIMPVQPISERLQAYFDSLKSKYGIQLSDEQKAWYQAKERTLGDDMKREYPSLPSEAFEQSIEGAYYAKQFAYLYANSRIDKLPDNEHLPIDTYWDLGVSDSTTIWFIRQVGDEFHIVDYYENSGEGLNHYIKVLKDKGYKYAKHVAPHDIDNRQLGADRAKTLRELARDGYEIDGQIYRLNFDVVPRTSNVNEDIEKVRQILPKCAFDAIKCEQGIKALESYRKEWNDKMGVWRDKPLHDWASHGADAFRYFATYQTKQQYATQLKVSMY*	hallmark_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0023	shell	direct	high	1472	0.999	GCA_001656255.1_01167
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	66886	67311	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	28328	28753	GCA_001656255_1_23_54	GCA_001656255_1_23_54	-	200239	.	PFAM:PF07141.10	terminase-small-subunit	MANKKPKMGRPSIFTDELANEICERVSLGRSLRSVCLDKDMPTKTTVMRWLDENEDFCDQYRRACEDRETTHFEEMLTIADEVLPETAEVARAKLRIDTRKWVLARMNPKKYSDKVQEDNADNAVSLMAQFMKELGEKQGG*	phrogs_hmm	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0024	cloud	direct	high	425	0.998	GCA_001656255.1_01168
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	67420	67812	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	28862	29254	GCA_001656255_1_23_55	GCA_001656255_1_23_55	-	200239	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MGSEKLEAYKKEFIEWGRWVRCDPDRLSYPSPWFEMIMRDNIPCSFVSPNITDDRAMAIDKAVSRLSRYSVLQYQIFVLYFAKNIPEYKIAKMADMRVFSNGRIKNARNIIKENLSGAMGYVIAFLENNA*	phrogs_hmm	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0025	shell	direct	high	392	0.997	GCA_001656255.1_01169
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	67802	68347	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	29244	29789	GCA_001656255_1_23_56	GCA_001656255_1_23_56	-	200239	.	PFAM:PF11753.7	nucelotide-kinase	MTHSTNDEVIYQKEPRQPKVGDIWACQEGAVLVFSISDIGVEYLWQDTPYEFVADSRSAEDWHKNFDYQENIFDCEGLKDDDPKLYKEIKEQKQMFESLKKKEATQDPVNHPSHYTSDPSGIECIQISENWSFCLGNALKYLWRNGKKDADTDIQDLQKAIWYIQREIERKKSVKGELDGQ*	common_virus_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0026	cloud	direct	high	545	0.998	GCA_001656255.1_01170
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	68337	68717	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	29779	30159	GCA_001656255_1_23_57	GCA_001656255_1_23_57	-	200239	.	.	hypothetical protein	MNSQEKHGDIKIGSKWSRQPDYPVVTVCDVKDGKVYFFGNGTNLTYRIDIQDFRDGFKRITPKISKYDRFSVLFVSLFAILMLIVLSIYLLFALSHYVGDDGKIILMAIFFFVFVFSAIEVFRNDS*	.	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0027	cloud	direct	high	380	0.997	GCA_001656255.1_01171
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	68692	68871	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	30134	30313	GCA_001656255_1_23_58	GCA_001656255_1_23_58	-	200239	.	.	hypothetical protein	MTTYYNEQNNQLAKVNSSKADKDGNIWVEIDGKAPVPMNYDDFIKNFRSMSNEFSRKAR*	.	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0028	shell	direct	high	179	0.994	GCA_001656255.1_01172
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	68900	69367	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	30342	30809	GCA_001656255_1_23_59	GCA_001656255_1_23_59	-	200239	.	PFAM:PF05772.11	NinB/-Orf-homologous-recombination-mediator	MMKQVFRIISELVMKHCFTEIVKQYESGQVCSVVITDKNETRTNAQNRLYWLWLKQIKDKTGQDDDDLHVMFKRLFLAKIYARDDGEMAQLFESLNTLKRQPNYEQQVALPFAKRFVTTTMATTAQFSEYLNEIEVWAFKNGIALSVPDDLKWIK*	phrogs_hmm	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0029	shell	direct	high	465	0.994	GCA_001656255.1_01173
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	69400	69747	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	30842	31189	GCA_001656255_1_23_60	GCA_001656255_1_23_60	-	200239	.	PFAM:PF06356.10	Endonuclease	MSMKYKNKKVKIDDITFDSKKEANRYLVLKQMQNSGLISDLTLQKPFILVNGTRIAGEPRKRPSVRYIADFVYFDNRAGKTIVEDVKSAITKKDKVYRLKKHLMKTVHDIDILEI*	common_virus_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0030	shell	direct	high	347	0.997	GCA_001656255.1_01174
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	69758	70654	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	31200	32096	GCA_001656255_1_23_61	GCA_001656255_1_23_61	-	200239	.	PDB:2RU8_A	Primosomal-protein-1	MSFKAVAWAAEQTKTTTSSQTLLLMILANFANEDFRAYPSLETLSKLTRLDKRTVRKCLIELQELGLIFDTGDKYKKQICVYYLNLLDDKVGDNGANLAVKGGTILHERGCKNDTPNKNDTPNNFVSKGGTILHKGGTILHERGYKNDTQSYYKPINKPIINPVSINTHARTSENSDHLNNSEQQSEMVKKPSSSSNDFGEQKTHTPAKKSKTKHSEQKPVDVKAYLAELGVSKQACDDFIDFRKQLKRPLTITAVNRLVNEANKAGLTVEQAEMQNEINRFLTTFGRKKHGLQTTEV*	rep_hall_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0031	cloud	direct	high	896	0.999	GCA_001656255.1_01175
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	70644	71054	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	32086	32496	GCA_001656255_1_23_62	GCA_001656255_1_23_62	-	200239	.	.	hypothetical protein	MNEFIIPNSVSNDYSRTDLDAQEQQIAEFIKKCGKVINLDNTKRPKKKSKRDFNNQGIKSEMHLVLCYLKKSGKRMTGIQIQEKFGISAVTLGTQARLLNAQAGKTLIENEKIRDENNRLKRVYWATRQGMKQDEF*	.	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0032	cloud	direct	high	410	0.998	GCA_001656255.1_01176
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	71070	71312	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	32512	32754	GCA_001656255_1_23_63	GCA_001656255_1_23_63	-	200239	.	COG4197	DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily [Transcription]. 	MSKTKNKAVQRLIEFFGSQMKLADALDVEQSSVSGWLNNRFYISRDNADLAESLTNGVVRSEELRPRKKTKPLAATRGSD*	mmseqs_cdd	nonviral_gene	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0033	shell	direct	high	242	0.996	GCA_001656255.1_01177
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	71455	72153	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	32897	33595	GCA_001656255_1_23_64	GCA_001656255_1_23_64	+	200239	.	PDB:2FJR_A	Repressor-protein-CI	MELKDRLKYTRKAKGLTQKQVTEQIKGLSQSAYSQLESGKSKSTTRAIELAHLFGVDVHWLISGEGEMTKNNYKLTPITEWDDSTPLDDEVEIPFYKDIAFACGHGAVNDAVTHETRKLRMGKRTLSNLGVMSENAFAVTARDDSMTPYVQDGDTIYIDKGRKEIKDGRIFAIRFGELCLCKRLYRLPDGGVRIVSDNAAEFPEQVATKQQISDGEFEVIGWVWSVSRLERW*	common_virus_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0034	cloud	direct	high	698	0.999	GCA_001656255.1_01178
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	72416	73324	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	33858	34766	GCA_001656255_1_23_65	GCA_001656255_1_23_65	+	200239	.	.	hypothetical protein	MTQTIDIDFHIKYNMTTTPSVDDVVTSLTALQHLIPKSVTVLDKIYPELNIHTAELLVEDVRAGSLWEDLKVKLTVGLVGEQNAKKLQEVLNDSIKHHHMLSKLLYAGFAAVVAFGAITAVQSCSKKEQAVVNNFYDNSTNIAILSEHSDLSDDEVVAVVKSVMDKKTIQKTADFIQPAKQDPNGSIEIGGKTANPQTIPNEVVQAVPEQIEVPQQEEREQDYSNIDVYIYASDQDKNTQGWAGIVPELFEHRVKFELAEDINPYRLHGQRKINADITVIERYQKSQKKYTVAKVIIRQVVQ*	.	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0035	cloud	direct	high	908	0.999	GCA_001656255.1_01179
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	73690	73941	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	35132	35383	GCA_001656255_1_23_66	GCA_001656255_1_23_66	+	200239	.	.	hypothetical protein	MALCNDPRFGVCNKFTIFSISPTPHYSFHIDKIGGDYLVMNGNECCKYTDTSRKALDFIRKQLSYSLDADVQAVVASMPKILD*	.	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0036	cloud	direct	high	251	0.996	GCA_001656255.1_01180
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	74113	74388	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	35555	35830	GCA_001656255_1_23_67	GCA_001656255_1_23_67	+	200239	.	.	hypothetical protein	MAVYRRQGIDMQTVTATIRLGKSEQVITGRIGYQDGQYHSIILSVLVYLGNHEIELDLQAHDDWQIAEVLAIQAGLFEPTALSENIKGAAA*	.	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0037	shell	direct	moderate	245	0.888	GCA_001656255.1_01181
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	74385	75014	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	35827	36456	GCA_001656255_1_23_68	GCA_001656255_1_23_68	+	200239	.	PFAM:PF05565.10	resistance-protein	MNDRYFMDFIELQFSEEELAQFDDEQQYYDLLAHEFGLPFESEAKKEAQISKEAEESLIRLDEMLENGETPSDEEVNDLLDLRGDLHDKLLNYGKFIKNNSSDIDALDGEIRRLSAKKRALNNLNECLKSNMLAAMQANDIKKVDDPIIPIRRQKSIPSVCLDINADRLPKEFQKMEIKANNVAIAKALKDGIVIDGANLVQNEHIRIG*	common_virus_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0038	cloud	direct	high	629	0.998	GCA_001656255.1_01182
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	75114	75743	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	36556	37185	GCA_001656255_1_23_69	GCA_001656255_1_23_69	+	200239	.	CDD:cd01120	RecA-like_NTPase-recombinase	MAIGAFILGQSGTGKSFSLRNLNPDNVGFINVVGKYLPFRGAEFKQVVTDDPNLICDILMKSKAPIIIIDDFQYLMSNKYMRDSEVKGYDKYTENGKNIWRILNTVNYHMKPYQRVYILSHTDEVDGKTKLKTIGKLLDEKITPEGMVGIVLQTHIESGKNYFITKNNGFTTVKTPFEMFDNDLITNDLEMVDNAICNYYNLSKNGENS*	common_virus_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0039	shell	direct	high	629	0.998	GCA_001656255.1_01183
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	75740	76378	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	37182	37820	GCA_001656255_1_23_70	GCA_001656255_1_23_70	+	200239	.	PFAM:PF05037.12	single-strand-DNA-binding-protein	MNYFIACNDADAAKFGASNFIDGDTAQVVKITQAYYTQNDKGTQTLHLSLISSEKQTGDVAIHFANGQGERLIGYNLINAILKVTGTAGITQAQGTYSAYDFNAGGTVNKQGMVAPELVGKFFGAIFSKNYRINDKGEEKYSINLFGVYHAQTQQWAKQMINGEQALPGQIDQMLERAKAESEKSRANPYGKRQTQQVSYQQNSQARQHPQR*	phrogs_hmm	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0040	shell	direct	high	638	0.998	GCA_001656255.1_01184
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	76431	77465	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	37873	38907	GCA_001656255_1_23_71	GCA_001656255_1_23_71	+	200239	.	PDB:1Z19_B	Integrase	MGVYPLISLKQAREKSLSAKTQLLHGKDPKLEEQIAKQAYINADTFYECFLQWYDKSAVITKKQASDIKRSFELYVFPVIGSLPINDITLQQYIIIIESISEKTPGIAERILTNTKQMLKWAKKREIVTHNILADLELSDFNLVRVKRKRYLSDDEIILFYKALYGSKISYRNRLATELALMFGCRGIELRRAKITDFQDSVWTVPPENHKVGHITQQPLIRPILPPMQALIDEAIAISRSEYLFDRRGEMLEKNAFLDITTGLIHWIDRHCSIQLPRFTFHDLRRTARTNFSAFTSRDIAEIMIGHTVGNMQQVYDHYNYLPQQTAAYEQWLKKLAELKQVAL*	common_virus_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0041	shell	direct	high	1034	0.999	GCA_001656255.1_01185
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	77619	78764	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	39061	40206	GCA_001656255_1_23_72	GCA_001656255_1_23_72	+	200239	.	PDB:5U30_A	endonuclease	MKTLKLRIKDKHATQLNRLSSSVNFVWNYVNDLSYKHLQKTGKFFSAYDLNEYTKGSGELLGLHSQTIQAINETHAKSRKQFKKAKLKWRTNNSKSKHKSLGWIPFKQSAIKHIATHQTGKKGLKSTLQLSLAKGQKLIIDLWDSHNLSLYQINTCELVQDSRNRWYACITVKEYPKTQCGTGSVGIDLGLKDSATTSNGDKLQIKQTLKYAKDLAIAQRAKNKQRVKAIHAKIKNTRLDLIHKFTTQLVRDNAIVVVGDVKSNQFNSKKGKLAKSVYDAGWFELKRQLTYKCKHAGCRLEIVNERYTTQICSCCGDMSSSPKGRTDLGIREWACAECGTRHDRDINASKNILAVGLDRLGAGIPTLRAGRKSKATPNLKS*	common_virus_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0042	shell	direct	high	1145	0.999	GCA_001656255.1_01186
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	79162	79779	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	40604	41221	GCA_001656255_1_23_73	GCA_001656255_1_23_73	+	200239	.	PFAM:PF10078.8	transcriptional-repressor	MMFCATLSQTFNFAKIMTYKIIIDGATSQAITDKATAYANYRAVCRDYDNKPKKVELVHDDSELSAKAPNMMLLDNNDVFSANDVLCQAMQTLGINIKGLKDKIKTSELKLSNSRIDGWIRPSDDRHFVQMHNDELVAVLKLLLSDTVATIKSPENIVALRKKLGLTQSELAKKFGLKSGFRQVARWESGEQEMPDAKWKKMQDF*	phrogs_hmm	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0043	shell	direct	high	617	0.998	GCA_001656255.1_01187
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	79893	80069	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	41335	41511	GCA_001656255_1_23_74	GCA_001656255_1_23_74	+	200239	.	.	hypothetical protein	MKNMQTLNRELKMAELERIKMEAEKLRAETVKLQKEANWFPWLSLAVALIALIVALVK*	.	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0044	shell	direct	high	176	0.994	GCA_001656255.1_01188
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	80148	80753	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	41590	42195	GCA_001656255_1_23_75	GCA_001656255_1_23_75	-	200239	.	PFAM:PF08291.10	Peptidase-M15	MNSFHIEQTLLTHIKSWEHFDDIPLAKENRNFKPPDGIWGDKSKQALKSAINDGKIITITKNISLNELLASNTAKRHNIDNMPNQAILQNLIDASVNLYQPVRDILGVPIIITSGYRCPALNKAVGGSSTSAHMSGYAIDFRSPRFGTPKIIVPHIVRKLKEKGIGFDQAIIEYPKSPRSWVHLGYKHPNGKQRGSSFVIG*	common_virus_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0045	shell	direct	high	605	0.998	GCA_001656255.1_01189
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	81339	81539	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	42781	42981	GCA_001656255_1_23_76	GCA_001656255_1_23_76	+	200239	.	PFAM:PF16777.4	transcriptional-regulator	MPKITSTPKSQTQIQKESNERRGVKNKAFTLKLDDIELIKSLSKRLNIPQNQLIMDAVRAYQRQLD*	phrogs_hmm	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0046	shell	direct	high	200	0.995	GCA_001656255.1_01190
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	81536	81883	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	42978	43325	GCA_001656255_1_23_77	GCA_001656255_1_23_77	-	200239	.	PFAM:PF04883.11	putative-tail-component	MGIKWNKKMTVEPIADKIDDIYRKFAIDCYNNVIALSPVDTGRYRLAHHISIGEKSLNENGGGVELVLGIPKHTYPIIYIQNNLPYALRLEHGWSQQAPTGVYGNAFNSALGALG*	hallmark_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0047	persistent	direct	high	347	0.997	GCA_001656255.1_01191
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	81873	82232	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	43315	43674	GCA_001656255_1_23_78	GCA_001656255_1_23_78	-	200239	.	PFAM:PF12206.7	head-closure-Hc1	MKQEITQEIKQAFDTDLKDAVKDFTAKRIILSDDDWAVNDTQVLSTINYSGRGVFTGFYAHEIDNKTIMQQDTKLICLQSELTDTPQMNDSINQMKVMNISQDPAGICYFIQLRGINGD*	phrogs_hmm	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0048	persistent	direct	high	359	0.997	GCA_001656255.1_01192
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	82362	82754	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	43804	44196	GCA_001656255_1_23_79	GCA_001656255_1_23_79	+	200239	.	.	hypothetical protein	MNVIYKTEAGTKVKKAVKALNIKAKIKVTQHRYKVYVSITTTNAKLCEVEALKKVTSEMTSEIDDIYVTHNNNQTNEYAKMLNDLAVKFFCKKYRNNHQTDEELAEIAKPHIQKIINGTHRLSSEFWATI*	.	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0049	shell	direct	high	392	0.997	GCA_001656255.1_01193
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	82802	83011	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	44244	44453	GCA_001656255_1_23_80	GCA_001656255_1_23_80	+	200239	.	7DTR_A	HTH motif, protein interaction, VIRAL	MKPHIDNHRPDPTYLRALLKKAELSQRKAAHMLGVSERMMRYYLVHTDDPNYRPMPYAVQFCLECLAKT*	hhsuite_tools	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0050	shell	direct	high	209	0.995	GCA_001656255.1_01194
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	83230	83775	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	44672	45217	GCA_001656255_1_23_81	GCA_001656255_1_23_81	-	200239	.	COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ribosomal structure and biogenesis]. 	MSQFSDALIHIVLFSPKIPNNTGSIIRLCANTGAQLHLVKPLGFELDNTRLKRAGLDYHEYATLSVHGNWQETKSALKSLGVERIVAMTTKFSRPFYEYQFKLDNDQHKVALVFGSETDGLPDDVRADIGANHWLRLPMLPDSRSLNLANSVGICLYEVWRQLGFVGDVGQSVGYHKPTSR*	mmseqs_cdd	nonviral_gene	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0051	persistent	direct	high	545	0.998	GCA_001656255.1_01195
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	84023	84163	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	45465	45605	GCA_001656255_1_23_82	GCA_001656255_1_23_82	+	200239	.	COG5510	Predicted small secreted protein  [Function unknown]. 	MKKVLIASIAAVVVLTGCNTIKGFGKDVSKTGEAVSDTAQKVEKKI*	mmseqs_cdd	nonviral_gene	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0052	persistent	direct	high	140	0.993	GCA_001656255.1_01196
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	84258	85433	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	45700	46875	GCA_001656255_1_23_83	GCA_001656255_1_23_83	-	200239	.	COG0635	Coproporphyrinogen III oxidase or related Fe-S oxidoreductase [Coenzyme transport and metabolism]. 	MYPDLLDPAHIPLSLYIHMPWCIKKCPYCDFNSHALPSQAPFESYIEALLSDAVSQQSLVSNRQIDTVFIGGGTPSLLPIESFKRLFDGLRLIYDFAPTCEITLEANPGTLEHSPFDEYLNIGINRLSIGVQSFDHNALTVLGRIHNPDQASNAIRAARTAGFDRVNADLMYGLPNQNSSKAVNDIQTAIDAGATHLSWYQLTIEPNTAFYRTPPQLPDEEIMAEIETLGQSVLTKHGFYNYEVSAWHGPNDAPCRHNLNYWQFGDYLAIGAGAHGKLTLKNYPNYQDGIYRYQKSRLPKDYLAFENAPKMVNFERIADDNLPFEFMMNALRLKDGVSTDMFETRTGLLISTIDNEMLPLQHQGLMVLDPLRIAPTHLGFRYVNYLVSQFI*	mmseqs_cdd	nonviral_gene	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0053	persistent	direct	high	1175	0.999	GCA_001656255.1_01197
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	85447	86622	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	46889	48064	GCA_001656255_1_23_84	GCA_001656255_1_23_84	-	200239	.	PDB:1OYW_A	ATP-dependent-DNA-helicase	MTETTVKNFDDLPLSEPILKAVQALKFDQLTPIQAQILPHTLANQDAIGQAQTGTGKTATFLITIIESLLKRPFQADEIRYLGEPRALVLAPTRELAQQILADCRELTRFSQLYNLCITGGADFDKQLEQLHKRPLDILIGTPGRIIDWVNKGELFLDRIEVFVLDEADRMLDMGFIPDIKRIVRHMPSNTERQSLLFSATFNQDVMNLAYRWLHQPAFVEIAPESKTNQAIDQQFYLVTEREKISALKQILADDSVKKTIIFANRKDQVKRLYDYLRRHHKVTMLSGDVAQQKRERYLQRFKDGEVNVLVATDVAGRGIHVDDVTHVINYTLPDMPDDYVHRIGRTGRAGLSGVSISFVGENDAFNLPALERHVDQKFKLNQFEFLDEHK*	common_virus_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0054	persistent	direct	high	1175	0.999	GCA_001656255.1_01198
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	86653	87081	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	48095	48523	GCA_001656255_1_23_85	GCA_001656255_1_23_85	-	200239	.	.	hypothetical protein	MMKNKWMRGLAILALSLPTVTYAKTSAPKSPEAPKESLTQEEQMAIDFCDFSAYGVMHIAAEHQSGVTKSEALTNHDERMAKLRGIDPETATMLDQYWKGVIDRIFQESVQKTDAEKQAFVMGVGESSFYSCLDQVLKTPKN*	.	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0055	persistent	direct	high	428	0.998	GCA_001656255.1_01199
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	87419	88297	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	48861	49739	GCA_001656255_1_23_86	GCA_001656255_1_23_86	+	200239	.	TIGR02139	sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]	MPNQPIPLKNRTRRVMPFFGLSMGISIFALGLLVILPFLMMILTTLQMGFGDIMRTIREPQVFAAIKLSLSMAMLATLTNLIFGTLVAWVLVRYEFWGKSFLNALVDLPFALPTAVTGIALATLYAPNGLFGQWFTRLGILLFDEPIKIAFTPIGIWLALVVVSFPFIVRAVQPVLAELSVEFEEAAAVMGASRLTTFFRVILPEITPAMLIGAGMMFARATGEYGSVIFIAGNIPMQSEILPLIIVSKLEQFDVAGAACVSLFMLLISLVVLFTINFIQWKLSARLGAKTN*	mmseqs_cdd	nonviral_gene	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0056	persistent	direct	high	878	0.999	GCA_001656255.1_01200
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	88349	89188	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	49791	50630	GCA_001656255_1_23_87	GCA_001656255_1_23_87	+	200239	.	COG4208	ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]. 	MANTSSYSYQKNPATRDKTWVKWSLIGIAVVFMGVMLVVPLVSVFYEALKEGWQAYQEALLEPDALASIKLTLITAVIILPINTIIGVALAYLITRHQFHGKFVITTLLDLPFAVSPVVAGLMFVLVFGANTRLGGYLESMGIQVIFATTGIVLATLFVTFAFIARELIPLMQAQGDSEEQAALTLGANGWQMFWKVTLPNIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLMIEIAYNEYAFTLAFALSSLLALLALVTLIAQGLMSHKK*	mmseqs_cdd	nonviral_gene	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0057	persistent	direct	high	839	0.999	GCA_001656255.1_01201
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	89285	90004	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	50727	51446	GCA_001656255_1_23_88	GCA_001656255_1_23_88	+	200239	.	COG1118	ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]. 	MSIKIQNIHKTFGDFVALGDISIDISTGELTTLLGPSGCGKTTLLRIIAGLENADSGRIYFDSIDVTDIPVQHRGIGFVFQQYALFRHQTVAQNIAFGLTLLPRNTRPSANTIDRRVDELLDLVQLSHTKTRYPHELSGGQRQRVALARALATKPKLLLLDEPFGALDAKVRKSLRDSLKDIQREIGITSILVTHDQEEAQAISDKIVIMNHGQIEQIGTPSKLFAQPSSDFVVDFLGL*	mmseqs_cdd	nonviral_gene	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0058	persistent	direct	high	719	0.999	GCA_001656255.1_01202
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	90046	91464	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	51488	52906	GCA_001656255_1_23_89	GCA_001656255_1_23_89	-	200239	.	PDB:3BH0_A	Helicase-ATPase	MAKAKSSYICQNCGAIYGKWAGQCTDCGEWNTLVEAPNTSLPHHHKSKTTTVPRKTANYAGAVSAVMTLDHVGVTLETRMPTGIGEFDRVLGGGLVAGSVVLIGGDPGIGKSTILLQTAINMASSNSLAGSALYITGEESLSQVAMRAVRLGLPTDRLRVLAETNVDIICAALTAEQPAIAVIDSIQTLFTEAIQSAPGGVAQIRESAAVLTRYAKQTGTALFLVGHVTKEGALAGPRVLEHMVDTVLYFEGESDSRFRMIRAIKNRFGAVNELGIFGMTDTGLKEVANPSAIFLSRYDKPIAGSVVMVSREGTRPLLVEVQALVDTAQAQPRRMALGLDYQRLSMLLAVMHRHGGIHTSGMDVYVNVVGGVKVMETGSDLAVLLACASSIREKALPNRLCVFGELGLSGEIRPVPNGQERLKEAMKHGFTHAIVPRANAPTTNHPQFKNIQIIAVDRLDEAIYQAFEINVG*	rep_hall_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0059	persistent	direct	high	1418	0.999	GCA_001656255.1_01203
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	91762	93594	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	53204	55036	GCA_001656255_1_23_90	GCA_001656255_1_23_90	+	200239	.	COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent [Energy production and conversion]. 	MTAKITAPDFVRHQALIHWVAEIAALTKPAAIEWCDGSEEENQRLIDLMIKNGTMIKLNEDKHPNSYLAFSDPTDVARVEDRTYICSKEEIDAGATNNWVEPSQMRTKLNNLFDGCMAGRTMYVVPFSMGPLGSHIAHIGIEITDSPYVVVSMRKMARMGKEVYDVLGADGEYVPCVHTVGSPLTEGQKDVAWPCNDDKYIVHFPETREIWSYGSGYGGNALLGKKCLALRIASAMGREQGWLAEHMLILGVTNPQGKKHYIAAAFPSACGKTNFAMLIPPAGYEGWKVETVGDDIAWIKPSEDGKLYAINPEAGFFGVAPGTNTKTNSNCMSTLGSDVIYTNVAVTDDGEVWWEGKTKEAPNNLTNWKREPHTGEERAAHANARFTVSAKQCPSIDPQWENPEGVPISAFIFGGRRADTVPLVSEAFDWVDGVYKAATMGSETTAAATGQQGVVRRDPFAMLPFAGYNMADYFNHWLQMGENLGKKAEAAGNQLPKMFKVNWFRRDENGDFVWPGFGQNMRVLQWIIERCEGTANAVRTPIGLVPTYDDINWDQSDFTKAQFELVTSQDKDAWIKELESHAELFDKLGERMPAALKAHNAKLKADIEQV*	mmseqs_cdd	nonviral_gene	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0060	persistent	direct	high	1832	0.999	GCA_001656255.1_01204
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	93659	93811	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	55101	55253	GCA_001656255_1_23_91	GCA_001656255_1_23_91	+	200239	.	.	hypothetical protein	MLNDKTVNNKPIKQETTNFFKAGYFVLKLCYKLFIWNGQNLPDTQIGRRF*	.	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0061	persistent	ambiguous	low	56	0.366	GCA_001656255.1_01205
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	93755	96214	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	55197	57656	GCA_001656255_1_23_92	GCA_001656255_1_23_92	-	200239	.	PDB:5EMI_A	Cell-wall-hydrolase-autolysin	MKKHTKSSIPTQILKPLSLAISSCILVACSSTGTPTKPVSQTPKPIPQAKPSQQINISSGNTNLGNTKAGADVDVLDVQMLDALEALLQATDMSMVEGDELAIQRYGNLWDRVRRGYRINEMTNARIEAQKSWFYTRQTYLDRLTARASRYLHHTVAEAERRGIPSELALLPIIESSYDPTATSNAAAAGLWQFIPSTGRIYGLNQSATYDGRRDVIESTRAAYDFLTSLYNQFGSWELALAAYNAGPGRVSRAIKANQDQGLPTDYWSLKLPTETMNYVPRFLAVAQIVRSPNTYGINLPAIANHSHFRTVPVNYGVSLSEVATVTGLSVSELRLLNPALLNFTVDEIGPNRIVIPDSLPNQIDNQLASLKGHGFGGDYIATAPAQSITYVVPKSGAAANTSSQQELIAANTLPTTIAQVTPNNTIVQEPALSKSEINLIAAEIQKTSPEVPAISPQDGNIQLNAVQTGQSVLDARGETKMLSFADGPKTQAITPPAQQPVQVSITPPAQPVQITVVSPTPEPISQPQPQLPPVTASIPVVSSPPVLVAPPPSRPRPEPASRPKPKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKPQPVSAQQPSQATQSTKNNQSTQSTATHRVQSGESLTAIARRYNISLHALAKENGLSVTDGVLIGQTLKLPSDAKAESSTPSRLGNAKNNSTRTPANTNIGITENYTVKAGESLTMLSNRFGVAIGDLAAANGLASNANLRIGQTLKVPKLTTTYTVKAGDGLIALARRYGISTQELAKMNNLEPTADLRIGQVLTVPNK*	common_virus_hmm	common_virus	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0062	persistent	direct	high	2459	1.0	GCA_001656255.1_01205
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	96409	97014	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	57851	58456	GCA_001656255_1_23_93	GCA_001656255_1_23_93	-	200239	.	PF13474.6	SnoaL-like domain	MAYSFIDKYIEYKGWFMKYSTRSVLKKVVAASMLTAAIRSVIQFTGKSFGKGASIGLFIGMIGVQSLITTNAYAISEQDVSRYASSMSSAANAQNIAQISRLIADDAIISLSRGGKTTSLDKEGYLQLLQKSWAKSSGYRYRINVADVVVTGDQARAQIVTTENWTQDGRPVTINTASRATFSQVGNHVVLLRSVSQVTVD*	hhsuite_tools	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0063	persistent	direct	moderate	558	0.921	GCA_001656255.1_01206
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	97102	97905	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	58544	59347	GCA_001656255_1_23_94	GCA_001656255_1_23_94	-	200239	.	COG1253	Hemolysin or related protein, contains CBS domains [General function prediction only]. 	MTLIILIGTEIIPKTIGTVYWRRFAMPVAYYVRTINVALLPIIWVTEKISRMLTRGNQEIGFNRHEFLALANQGESLGQMSEMETRIIKNSLALGMINVEDILTPRSVVSAFDENMTVGDVFASYPKLPFSRFPIFDADLDNATGFILKSDLLIAKANQEIHTPIKQFRRDINFVFAKMKLFDLLDLMLKEQVHIALAVGEFGEVKGLVSLEDVLETLLGLEIVDEFDRVDDMQILARQLMDRRMARLGAKLEEDTPFDEKSAGSNK*	mmseqs_cdd	nonviral_gene	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0064	persistent	direct	high	803	0.999	GCA_001656255.1_01207
GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote	cenote	CDS	97905	98327	GCA_001656255.1	LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255.1_LXHH01000015.1	GCA_001656255.1|LXHH01000015.1	GCA_001656255_1_23	GCA_001656255_1_23@C3	59347	59769	GCA_001656255_1_23_95	GCA_001656255_1_23_95	-	200239	.	7M1T_A	CorB, CNNM, DUF21, magnesium transporter	MPRPRTQNLANLSFVSIAVFTVSVAAVFIPSTAFAAFELGGTPTNLALLIFFICLSLVVSFLCSISEATLLTMTPSYIDTLEEDNPKGAALLKSVKVDHIEKSISAILTLNTVAHTLGSLGAGAQAVIVFGMRGLGCSAV*	hhsuite_tools	hypothetical_protein	C3	59769	38559	98328	GCA_001656255.1|LXHH01000015.1@region_38560_98328@tool_cenote_CDS_0065	persistent	direct	high	422	0.998	GCA_001656255.1_01208