core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	628852	628959	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	1	108	GCA_001679345_1_1_589	GCA_001679345_1_1_589	+	1120865	.	.	hypothetical protein	MTDKMREAYEAIKAEQALQRQSEALMCMFDRLEKA*	.	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	628989	629390	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	138	539	GCA_001679345_1_1_590	GCA_001679345_1_1_590	+	1120865	.	.	hypothetical protein	MMRLVMFGIKLLHSDDFIKSASSFGCFLAIMDKQTNKNHVYNLSTQVQRFELIDIDQVANLANSVQNGAISATVGTLLVRAGVLPALVALSIGAGLPNRTKDAYVCHIEFDNGKSAILQLSKHKYQQFLKHIA*	.	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0002	shell	direct	high	401	0.998	GCA_001679345.1_00579
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	629453	629671	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	602	820	GCA_001679345_1_1_591	GCA_001679345_1_1_591	+	1120865	.	.	hypothetical protein	MALAINIVLGANTVHFSRNIQKATQNAKKYLQGFALLAYMQAADKDKSVQDFLIIDPNPMTDEQKKPLLSAL*	.	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0003	shell	direct	high	218	0.995	GCA_001679345.1_00580
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	629689	630585	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	838	1734	GCA_001679345_1_1_592	GCA_001679345_1_1_592	-	1120865	.	PF14337.6	Domain of unknown function (DUF4393)	MTAETFHLIPAITGAVSGAASVGLLNGPLQTLQDIWFVVYGHKWHYKVESIKAQQAMNIQAMQNNIQTGIEKIPANALKDPNVAIIGPALEASRFHMNEENIREMFANLIVSAMDERKDGQVHHAFVEIIKSLSPLDAKNLEYLSQSGDAPIVNIVKEASYGFHMLHQHVFLGNPEVSDQDLIAPSIDNLSRLKLIDITYNDYLTDDSEYESFYHSAPYQEMTSALDKEHEALNLDISILQNPDLKIEFEGKILNKDERSEKLDQVIKGLESKIEIQKGVIKLTAFGKNFLSVCSPTT*	hhsuite_tools	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0004	shell	direct	high	896	0.999	GCA_001679345.1_00581
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	630637	631287	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	1786	2436	GCA_001679345_1_1_593	GCA_001679345_1_1_593	-	1120865	.	PDB:2FJR_A	Repressor-protein-CI	MPSERAKADQFPKMIRRYSKGQAKPRNDKMKLLTQCLGVPITWLDYGEGEMTKNNDKLAPITEWDNGAPLDDDEAEIPFYKDIAFACGHGAVNDEVTHETRKLRMGKRTLSNLGVMSENAFAVTARDDSMTPYVQDGDTIYIDKGRKEVKDGRIFAIRFGELCLCKRLYRLPDGGVRIVSDNAAEFPEQVATKQQISDGEFEVIGWVWSVSRLERW*	common_virus_hmm	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0005	shell	direct	high	650	0.998	GCA_001679345.1_00582
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	631490	631786	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	2639	2935	GCA_001679345_1_1_594	GCA_001679345_1_1_594	+	1120865	.	.	hypothetical protein	MNEFIIPNSNSVSNDFNYSRTDLDAQEQQIAEFIKKGGKVINLDNSEQPKKKSAKKRDFNNQRINSKMHLVLCYLKRSGKRMTGLQIQEKRHIGNNFR*	.	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0006	shell	direct	high	296	0.997	GCA_001679345.1_00583
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	632159	633121	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	3308	4270	GCA_001679345_1_1_595	GCA_001679345_1_1_595	+	1120865	.	PFAM:PF06152.10	minor-capsid-protein	MKHLINLERLKVHLSNKFKTTLNEIDEFLQLVVFRHEISELNYKEFELLIGESKQKLLGFLAGYALELTQDWQELYDYSYTLETKMIDDDKPDTLNMNEPQFDADSPIKLSAQVGVTLNQILAKFGDEQSTQISNAISYAYTNGLTNQELIQIIRGTRKNRYQDGILQTTTRHAKTIAHTGTAIVASQAKQQFIHDNKDIIKGIKVIATLDLRTSGICRHLDGEIMPIDKAVYPPYHYNCRSSFEIVYDGYQSPKQRTSMDGVVKNQTYYEWLKNQSKAYQVEVLGKKKAKLFQESGVDEFKEFDKNLRPMTLDEIKAQL*	hallmark_hmm	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0007	shell	direct	high	962	0.999	GCA_001679345.1_00584
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	633193	633945	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	4342	5094	GCA_001679345_1_1_596	GCA_001679345_1_1_596	+	1120865	.	PFAM:PF06810.10	minor-structural-protein-	MQLKTDENGYAIVQDGKPIYVHDDGQEIAFDAQATMAKISQLNSEAKNHREEKQKAQSLLKSFDGLDADEARRALELVKNLDDKRLIDAGEVEKVKAEARKALDEQLAQKDAQIKKINDDYRSAVIGGEFARSSFIKDKTLLPPDIAQNAFGRHFDMVDGKVVGYLNGEPIYSRTNMGELANFDEAFETIINHYPSKSDILRGSGASGVGVKQPLAQAGTTNLKRSQMSLEQKSAFIKEHGQTAYLNLGA*	hallmark_hmm	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0008	shell	direct	high	752	0.999	GCA_001679345.1_00585
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	633949	634716	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	5098	5865	GCA_001679345_1_1_597	GCA_001679345_1_1_597	+	1120865	.	PDB:4AN5_F	Major-Capsid-protein	MAITTNNDVLIYNELAQTAYLERLQENLAVFNKASNNAILLSDENLQGDFTKESFYKIAGKIEHRDVNSTSVVQAKKIAMAERVGVKVPFKFGPYETTEEAFKRRARSVDEFSLLLGQDYADALMAGYWKYATAALQGAVGSNSSMLVTAKLSEHGRKVITQGMRKFGDKFSNLSLLVMDAASYFDIVDGAITDKLYQEASTVVYGGAPGTMGIPVLVTDQAKKDTILAYNKGQFVSEIANYLRLECIKTIPKKT*	hallmark_hmm	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0009	shell	direct	high	767	0.999	GCA_001679345.1_00586
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	634686	634892	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	5835	6041	GCA_001679345_1_1_598	GCA_001679345_1_1_598	+	1120865	.	PDB:4AN5_F	Major-Capsid-protein	MYQDNTKENLVIGVRAEGAFNLDVLGYSYKDTAGANPNLAALGATANWEKYATSDKNTAGVILNIAEG*	hallmark_hmm	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0010	shell	ambiguous	low	32	0.155	GCA_001679345.1_00586
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	634894	635145	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	6043	6294	GCA_001679345_1_1_599	GCA_001679345_1_1_599	+	1120865	.	.	hypothetical protein	MLVYSKQGKKVLGVDGEYRNPEYFEKTEQTDAVTVIGDYPHIELAYQAIGVNVIRLGVDDTPAIDDDSEQTKAKSRRTPKAVV*	.	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0011	shell	direct	high	251	0.996	GCA_001679345.1_00587
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	635213	635377	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	6362	6526	GCA_001679345_1_1_600	GCA_001679345_1_1_600	+	1120865	.	.	hypothetical protein	MSKTKKARIDAPAKNGFNYKPKFGLVIQCDDEAHQQTVFEQLKQLGYKAKVVVV*	.	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0012	shell	direct	high	164	0.994	GCA_001679345.1_00588
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	635374	636516	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	6523	7665	GCA_001679345_1_1_601	GCA_001679345_1_1_601	+	1120865	.	COG2401	ABC-type ATPase fused to a predicted acetyltransferase domain  [General function prediction only]. 	MIINIHHTCTDFDSYRAERVKSLFNVETGADVKITADLPIESEHWQDKDWQLGVIVGRSGTGKTSTGKQIWEGTPIYNPTWQTDQPIIDQIATNDSIDKATAYLSAVGLGTVPAWLRPYQVLSNGEQFRANLAKALADEPNRLIIDEFSSVVDRQIACIGASAFAKAWKRTKGKQAILLTCHYDVLDWLEPDWVYNTDTGEFTVNRGLLWRKPPIAFDIYQTNWRFWELFEPHHYLKMPKMIASTNYVAVVGGELVAHLAVSTLPGLIEARACRLVVMPEWQGAGIGMRFLNAVCQMWLEGNNRYNKSMRTIFHTSHPNLAQALRRDKKWTQISAKLQGGNKLRSQQTMVKASGKNAGSGYGGHFRAVQGFRYLGEDFDE*	mmseqs_cdd	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0013	shell	direct	high	1142	0.999	GCA_001679345.1_00589
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	636455	637042	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	7604	8191	GCA_001679345_1_1_602	GCA_001679345_1_1_602	+	1120865	.	cd08822	Formyl transferase catalytic core domain found in a group of proteins with unknown functions. Formyl transferase catalytic core domain found in a group of proteins with unknown functions.  Formyl transferase catalyzes the transfer of one-carbon groups, specifically the formyl- or hydroxymethyl- group.  This domain contains a Rossmann fold and it is the catalytic domain of the enzyme.	MADILGRYRAFAIWGKILMNKLKVMIVGQKWLAEQLLARCLKKPNIEVVTVSPPNNTDRLARLATIHQIPIVVHDKTLTANQVPTGVDIILTAHAYCFVQKKARDKARLGAVGYHPSLLPKYKGKNAIQLAFNNGDKVMGGSLYQLDDGWDTGAVLAQSSVTVDSGDTLAILWRDKLAPLGLDLFEQFLNSHLTV*	mmseqs_cdd	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0014	shell	direct	moderate	533	0.906	GCA_001679345.1_00590
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	637083	637439	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	8232	8588	GCA_001679345_1_1_603	GCA_001679345_1_1_603	+	1120865	.	CDD:cd08053	Head-Tail-Connector-Protein	MITLDDLTDIDKADEQTVVIVNAWLNKHKIRAFDKTPDPIRQAGRYIAKAWLDGDLFVARTEGVVTSKSSKAGDVSVSKTYADGADGQAMGQHEMIALALMQPYIKKSYGVNALVGRL*	hallmark_hmm	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0015	shell	direct	high	356	0.997	GCA_001679345.1_00591
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	637436	637786	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	8585	8935	GCA_001679345_1_1_604	GCA_001679345_1_1_604	+	1120865	.	PFAM:PF12206.7	head-closure-Hc1	MRQEITADIANAFNTDLADAVKDFTAKRIILSDDDWAVNDTQVLSTINYSGRGVFTGFYAHEIDNKTIMQSDVKLICLQDELTEIPQIDDEINEMKIISISHDPAEVSFTIQLRGF*	phrogs_hmm	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0016	persistent	direct	high	350	0.997	GCA_001679345.1_00592
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	637786	638133	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	8935	9282	GCA_001679345_1_1_605	GCA_001679345_1_1_605	+	1120865	.	PFAM:PF04883.11	tail-component	MGIKWNKKLSIDPIADEIDKTYRKFAINCYNNVKTLSPVDTGRYRNAHHISVGAPSYSETGGGVELILGIPKHTYPIIYIQNNLPYALRLEHGWSQQAPTGVYGNAFNSALGALG*	hallmark_hmm	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0017	persistent	direct	high	347	0.997	GCA_001679345.1_00593
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	638130	638330	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	9279	9479	GCA_001679345_1_1_606	GCA_001679345_1_1_606	-	1120865	.	PFAM:PF16777.4	transcriptional-regulator	MPKITSTPKTQTQIQKDSNARRGVKNKAFTLKLDDIELIKSLSKRLNIPQNQLIMDAVRAYQRQLD*	phrogs_hmm	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0018	shell	direct	high	200	0.995	GCA_001679345.1_00594
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	638466	638684	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	9615	9833	GCA_001679345_1_1_607	GCA_001679345_1_1_607	+	1120865	.	.	hypothetical protein	MAMMIAILMDAFIVLLLVVMVTMATILPIKQTLLDVLYYSLAYLKSQVIITVLYEIVMIIWLFYPILKKELL*	.	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0019	shell	direct	high	218	0.995	GCA_001679345.1_00595
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	638681	639184	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	9830	10333	GCA_001679345_1_1_608	GCA_001679345_1_1_608	+	1120865	.	COG3600	Uncharacterized phage-associated protein  [Mobilome: prophages, transposons]. 	MIKAPYNPIDVANYIVAEAIKREKPVTHLKLQKLLYYVVAKYAKTYNTILINEDIVKWQYGPVVKSVYHYFKLHGDRIITKPIAYLESAEIFNLKFTDVDVNNAQLGNDKRLVDTVGQVLNDTDLLTAYELVERTHKEPAWRNFEPEILQAKQELSYSMTELKVANI*	mmseqs_cdd	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0020	shell	direct	high	503	0.998	GCA_001679345.1_00596
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	639181	640062	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	10330	11211	GCA_001679345_1_1_609	GCA_001679345_1_1_609	+	1120865	.	.	hypothetical protein	MMIQISGDNAFIRAIIERYLQVQDTSPDKLDDLANEIVWLILEAFDNELRSSDAFNLPYKDITDSVFDSEKRLLTGSLTTFGENMETAIHHSFDKDKPNKHHEKKEKYVKRFMYIHGKIVEHILLAQVQKEFIQDSVRQAQETAKKAEAAAESAEEIAKIAKNNADKAKKTYNTMFANYVTILGIFTAIIVTIFGGLNVVDTVISYGNTHFSTIIFLAALVLMCVVCLLYFLAKIILKLNGKDDDNQRFTLECLFGAIFITCIGLIVFAWCVSPTKITPELDKTTDKIEQKSD*	.	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0021	shell	direct	high	878	0.995	GCA_001679345.1_00597
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	640130	640516	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	11279	11665	GCA_001679345_1_1_610	GCA_001679345_1_1_610	+	1120865	.	PDB:2L25_A	tail-completion-protein	MNSFHIEQTILGHIKAWEHFDDVPLAKENRNFKPPDGIWGRVTILGGVNQVRSISNTPNILQQGTLVIQLFCPQDLGTVKIKIWSDSLAQHLKAKQLGRLELLAPSIINVPSNDGIYQINVSVPYRYY*	hallmark_hmm	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0022	shell	direct	high	386	0.997	GCA_001679345.1_00598
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	640525	640938	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	11674	12087	GCA_001679345_1_1_611	GCA_001679345_1_1_611	+	1120865	.	6E3C_C	Dec protein	MKLITASVLTALLTSFVATRTVQATPLNRQEYNDLRGWQVPDNENPNDDGYLVVNAGVSERNVDGFDGYVSWLPKLAFEEQYKNDNLTFGQAVELLKGGKKSLVKVGMARVCICCLLPTLILRLRLICQICRMKMAN*	hhsuite_tools	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0023	cloud	direct	high	413	0.998	GCA_001679345.1_00599
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	640914	641042	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	12063	12191	GCA_001679345_1_1_612	GCA_001679345_1_1_612	+	1120865	.	pfam11195	Protein of unknown function (DUF2829). This is a uncharacterized family of proteins found in bacteria and bacteriphages.	MQNENGELTVPSITMKTADNKFAVGWLASQTDMLAEDWVVVQ*	mmseqs_cdd	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0024	cloud	ambiguous	low	26	0.202	GCA_001679345.1_00599
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	641077	641985	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	12226	13134	GCA_001679345_1_1_613	GCA_001679345_1_1_613	+	1120865	.	PDB:5NGJ_B	Tail-tube-protein	MSSGAFVKTAYAKQTGETLPKTGWKTLPNISNGLTVATELTNSEMLSGSRMAKAGMVTSASVQGDIETELMFGAYDELLAAAFWSEWSAGASPNTLSVGATKHQFAIAKDFSDINVNHVFTGCVVSSFGLSVDTSSPIKLKFGMTGLGYQESKTESFTKTPTAQADTAKASGLSIGEIKVNGTKLDVCVESFSFELDNQTEVQKCLGDNIYGGNILAMLTNITGSMTIAYSQKAHEMISNQMTGATLSLELPIKFGNSKYVIKIPKFQVSGEIPSPSGTDLVTVDLSYTVVDESPVIEKHTA*	hallmark_hmm	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0025	shell	direct	high	908	0.999	GCA_001679345.1_00600
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	642069	642215	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	13218	13364	GCA_001679345_1_1_614	GCA_001679345_1_1_614	+	1120865	.	.	hypothetical protein	MEYITIIVDFMKYLIEKHGLFVIWLMVASLITLYKLDMILTAVHLFFN*	.	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0026	.	unmatched_CDS	none	0	0	.
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	642304	642726	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	13453	13875	GCA_001679345_1_1_615	GCA_001679345_1_1_615	+	1120865	.	PFAM:PF08809.10	Tail-assembly-chaperone	MSAKREIEFDGLELTLEIQASEAFKRAAAEVQKIANTPKKVTKDSLKRDSQDEIGEYEAMLFILGEYCISQWNVTADGEPLAINGDNFLILLDQGFEKDKLTQFITLLFETYASLSQEFEDNKAKLVKKSMTATNGKKSG*	phrogs_hmm	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0027	shell	direct	high	422	0.998	GCA_001679345.1_00601
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	643028	646888	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	14177	18037	GCA_001679345_1_1_616	GCA_001679345_1_1_616	+	1120865	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MSNTYRLDIQVNADSANTALGNLKEHFDKIEQSSGKASVGIDGFSDKADKASKSSKKAGDEAKKAGDGAKKFGDDAKKAGNDIDDLKHKADGLKTAFGTLKGVMFTALAVAGVGGIIATADDMQTLTSQIKIATTSTKDYAHAMSEIERIAMGNMVSLDSVGQLYASNERSLKQLGKSQDEVIKFTENITTAMRVSGGSAESQAAALTQLGQAMASGVLRGDEFNSIAEQAPVIMELMADSLGVTTGKLRDMAKQGKLTSKVVYDAIAGASASDKLAEKSKKMSTTISGAMQNIQTQWRLGVHAIMNGEGGLSSVLADGINSIALGASSFVDALPAINQAITDTIAKAKEMGTAFLESDFGQSAIQTAKDAFEQLKSAMQGVADIAGDVKVFFEENPELAIALASGVGAAAGAFLLFKGVLIVWAGVATLATVAGGALAAVMAVLTSPITLVIAAFAALVAAGVYVYRNWDTIKQKANDAWQSIKETWQGVGEWFGELWDKVKQTFFNWLSQMPKPVQDMVANIGEIFSTIVDVAGAVWDGIANIAKSVWHAITKFVSYAIDKIKPIIKSVLEFFKNAWDGLVGIAKTVWQAVVSVVSHVFDKISGIISTQFEAMKAIFMAGVTIFASIFNAGFEMVKTIFSTAFKVIKAVLTGDMQGVKDAIKDGFQKAVDILKKLVGNIVDALKKLGKDLLQVGRDAMQGFINGISEKIGAAVSKAKQMASSVKNAITGFFDIHSPSRVMKQVGGWISEGLAIGIAYKAPIAAKEAKNLAKSVKNDLESELQKTAEEIFLTKQHIAGNPYAQLTKDIAFGKYGKQDTSRLQKLAQEQILQSNILTLTQQLHEAQQNLANVGLTSIEIMQRQYDETDKSVRASLDLFEQVKKTSQELIDATNRHEATQEFESTLKDIKKQMAIMGSQEPLAEFLYDLQNAEKYAYYTTEQLATLKDEMIKLQAAKDAKQASDGIEESLKDINKQLALLGSNHPLDDFFYELEQTDKYAHATTDEINELTDAIFKLQNAKDTLNAKQAFDTLMKDTALANETPAQRLQREYDEKMAVIDRYEQMHSDKLENATSLRQQITERYEQAEKDAKVKNYQEHLTAFAGFLKNTAGEQSKAYRVMFAASKAYALADVGVKMGKAVADAWADPSAVTIWQKLANVAKVSLEQGHVLSMINAISPKGFATGGYTGNMGINQVAGVVHGQEYVLNAKATKRIGVGNLERLNRGDGIGGHVNHINVHVTVNSDGSNVQADTQMGKTMGEAMAKIARQVVIQESKQNGHLDRLYRR*	hallmark_hmm	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0028	shell	direct	high	3860	1.0	GCA_001679345.1_00602
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	646991	647323	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	18140	18472	GCA_001679345_1_1_617	GCA_001679345_1_1_617	+	1120865	.	PFAM:PF05939.12	minor-tail-protein	MKTFTWDISADSSETTALNTTITAFGDGYEQAVSFGINNSRKSWQCSKTDTKAVIDEILSFLLNTKGVEPFTFAPIKGEPAIKVRLDGEISRQKTGGDVWQIGFTLKQVF*	hallmark_hmm	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0029	shell	direct	high	332	0.997	GCA_001679345.1_00603
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	647427	647810	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	18576	18959	GCA_001679345_1_1_618	GCA_001679345_1_1_618	+	1120865	.	.	hypothetical protein	MSETTLTELSRTEATVLQSFIAQVDFWKNQHGDKAATIEVIYYPEDDGFEVSNNEPNNGVLKRNRTTAFRADLLAWASNQLRQLQGWDNSQTVTEFSLSYKNDRYGVRAALASEATDKADDGAEQTQ*	.	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0030	persistent	direct	high	383	0.997	GCA_001679345.1_00604
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	647953	648618	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	19102	19767	GCA_001679345_1_1_619	GCA_001679345_1_1_619	+	1120865	.	PFAM:PF05100.11	minor-tail-protein-	MSFNTDIQQTTVQGFITLYELDARKLGGEIYRFHGHNDGVIRWQGQDFHPIAIKADGLEMRSDGRASTPTLIIHNDIGGIPQALRFLCLKFGDFVGAKLKVIHTLAEYLTSADEQNFKIQNWYIEQKTSQTNVTTTFELSNPVDFEGQKIPVRQITSYCHWAVCGRYRGEECGYIGTNRFTTDGKPTDNPALDRCGGRMTECKLRDNEQRFGGFPAAGLVG*	hallmark_hmm	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0031	shell	direct	high	665	0.998	GCA_001679345.1_00605
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	648615	648818	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	19764	19967	GCA_001679345_1_1_620	GCA_001679345_1_1_620	-	1120865	.	.	hypothetical protein	MADKASPQARKKATANYFDKSLARIGLVISHTEPHVLDALNQIMAHKDCSKAMAIKIALVEYAKTLD*	.	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0032	shell	direct	high	203	0.995	GCA_001679345.1_00606
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	649201	649995	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	20350	21144	GCA_001679345_1_1_621	GCA_001679345_1_1_621	+	1120865	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MRLTKNLQQQIITHAQDVYPNECCGVIIDGQYHPCTNIAPNPANAFEIDTAEWVVLSNRGDIEAIVHSHPNGEPLPSEVDKVQMGLHDIDWVIVGLGHTPTGATYCDIKRHKPTTYQSPLLGREYYHGVQDCYSLVQDYYSRELDITLPSFARSDDWWENPNHEPLYENNFTKAGFIKVQDKNDLQKHDVILCRVGRTHHVNHALIWLGDDGALTSEKTPDCVGNALILHHPHGGLSVREIYGDSWQRRTAMVVRHQALSQTNL*	mmseqs_cdd	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0033	shell	direct	high	794	0.999	GCA_001679345.1_00608
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	649975	650388	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	21124	21537	GCA_001679345_1_1_622	GCA_001679345_1_1_622	-	1120865	.	COG1598	Predicted nuclease of the RNAse H fold, HicB family [Defense mechanisms]. 	MHYPVTLTPDTDGFCVTFRDIPEAISQGDTTDEALDMAQDALMVAMEFYFEDNRAVPMPSQAQDGEHLVSLPPSVWVKVLLLNEMIAQNVSQAELAKRMGIVPQSLTRLVDLSHTTKIDTLANAFAKLGKQLQVGLT*	mmseqs_cdd	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0034	shell	direct	high	413	0.998	GCA_001679345.1_00609
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	650404	650610	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	21553	21759	GCA_001679345_1_1_623	GCA_001679345_1_1_623	+	1120865	.	.	hypothetical protein	MVKAITPDEIRAAGEQFKSHPENNAPATADKLIANKSGFVLSERSLKNLQMIIAPLPKQWHRQAVSWA*	.	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0035	.	unmatched_CDS	none	0	0	.
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	650580	650699	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	21729	21848	GCA_001679345_1_1_624	GCA_001679345_1_1_624	+	1120865	.	PDB:2MXZ_A	L-alanyl-D-glutamate-peptidase-endolysin	MAQASGKLGVNVRWGGAWMVITGKAGTPQEWVKDYRAGG*	common_virus_hmm	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0036	.	unmatched_CDS	none	0	0	.
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	651024	652124	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	22173	23273	GCA_001679345_1_1_625	GCA_001679345_1_1_625	-	1120865	.	COG0842	ABC-type multidrug transport system, permease component [Defense mechanisms]. 	MRRFIKQYLTIWLDVIKDRSIFLTMVLSVVFYGFFYPFAYQAQRPADLPIVIVDEEQSPLTQAIIHTTSHTPNIHVLAVVSDFRQAQMLVQSAKADGILLLPDNLSQSIHHGQTGGVGLYLSSAYFLRTQNIGAGLVSSLQATIIQELGQVTQTRHKPMPELIHQSALFNPLSGYGSYIFPAVAPIIVYQTIVLGLAMLVAGYRQRLWRASACDFLAIYAVALTIGCLSCFYLFGFVFWWHDYPRGGNFWGMMLGVPIFVSCAIGVALLIASWVADGAKVGVLLIFSSVPLFMLTGLAYPLMAMPKFLQPLAHALPTTQGVQMFIQLNQMGVSIQDVWQKMAYLASVAVLCLGVAFWRLRLVNKSV*	mmseqs_cdd	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0037	persistent	direct	high	1100	0.999	GCA_001679345.1_00610
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	652124	653302	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	23273	24451	GCA_001679345_1_1_626	GCA_001679345_1_1_626	-	1120865	.	PF12698.7	ABC-2 family transporter protein	MIVRFIRAFCQAFLRELNRLSCNRFDLAMVMIAPLVIIVLFGAMFYHGKAHHLPVALVDEDNSELSHLIYQHIHHNETIKTVLILDNVQDAHHAINRLDVGGYIHIPKDAQNHLVRGENTGIHIAYNQSFFSIGSAISSALSKSTKGGIAKFIQTKHLTGVLPHLSGNMPHVKISVLFNPNLSYEFFLEPFLVAAVLHLLLCCLVAHAIGQEFHEHSVHEWLCHSPFGALFGKISVYVLIISLWHGLWQAWLIGVRGWFVAGSLFVLIIGQLLFYLAYALFGAMVVLKTQNINKSYGILAVYGGSSMSFAGVTLPLNNAPSFTQFWSQIIPFTPFARLQVEQWVIGSPFIITLAHLNSLLIFVLIFAIGSLLLLRRINKTLIAMPNTPKDDS*	hhsuite_tools	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0038	persistent	direct	high	1178	0.999	GCA_001679345.1_00611
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	653330	654493	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	24479	25642	GCA_001679345_1_1_627	GCA_001679345_1_1_627	-	1120865	.	COG1566	Multidrug resistance efflux pump [Defense mechanisms]. 	MTDKTDDVKPDTDGNHPKKQKPHTQAKSKPRPLALFLLLALIGSVLLVIIFGLIQSYGTPQNLPTANAIGSTNEPPKGVIAHLRQKITGPATFSIQGRVEGETVNISTKLPSRVAAIYVKEGQAVRAGEPLVQLISPEIDAKKQQAAAMLQSALAFQSSTDRGTRQENVDTLYANWQSAKAQATLAEESYRRGEYLYQEGVISRQRRDEMRAAKQSSAQIAQAAQQQYLKAQRGRTDELKSSADAQVQIARAAVAEADALDAETMLYAPIDGTVSKIYIQSSELVMPAVPVMSLLDNHPTITISVQENQYSHVHALPKLTGFIPALNKTADFKIVHTDDEGEFATIKNTRQTGGYDIHSFKTKLEPITPIEGLKVGMSVIFDITVLP*	mmseqs_cdd	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0039	persistent	direct	high	1163	0.999	GCA_001679345.1_00612
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	654540	656036	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	25689	27185	GCA_001679345_1_1_628	GCA_001679345_1_1_628	-	1120865	.	6U94_A	RND efflux system, outer membrane	MSIKCQLVAIDNIIKPCYDKILNFVYFSTMKMPYFLLLGLLLAQQADADYSLLDAQKQLMSSSPAIQASHALYQADVLQAESLQKLHYPRISLNAHAFVLQQNSSIPLDHIKEQTAQHINTHFDHRFGSAPDGLLDALHDSTQTALDRLPDHQDVKLRHDGITPNITATMPIYTGGLISSSKNIANLQAQRGKFGLQERISLAKLNLIRHYFNVQLQKQLTDTQQNMLSAMQLHVDNAYKLEQQGFISRGQRMQFEVARNRVQRLYQSTQNQHQNSIYELAVLLGLPHIEPLSTPLFINTQHRPNWQALLKDSQNTPLNQKLKTDILLADENIALRQSTKKPKIAAVARYTLDDKPDWFAGVAVSYNLFLGIDRDKQIEAAHLQKQAAQLGHEQVNEHITTTMHTAYGEMVLAQKTHALLQQNRQAAKENLRIQTLSFQEGFGTVAGVVDAQSALSQIDSETALNAYRYLLALATLLHYTGTIDDFDDYLSLDDAHKL*	hhsuite_tools	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0040	persistent	direct	high	1496	0.999	GCA_001679345.1_00613
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	656298	660470	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	27447	31619	GCA_001679345_1_1_629	GCA_001679345_1_1_629	-	1120865	.	PDB:5XDR_A	Replicative-polyprotein	MHSTDNLPVLAKDRHYLNKLKQKMNSTTGDLKTKCKIRYDAIYERSAEQVANRMDSIPKNLSEKLNHDLPVTAEADTLIQAIRDHQVVIIAGETGSGKTTQLPKLAMMAGRGITGQIGHTQPRRLAARSVAMRIAEELGEPLGQTVSFKIRFTEEGGKHSIVKLMTDGILLAELGSDKFLANYDTIIIDEAHERSLNIDFIMGYLKRLLPKRPDLKVIITSATLDTQRFSDYFAANGKPAPVYIVEGRSYPVEVRYHPLTDTIVSSQDDDAFDDIEDNLPRALTAAVNECFEDARTKGHPDQADILIFAATEAEIRELQEVLMLYEPAHTEILPLFARQSYGEQQKIFAPSGKGRRIIIATNVAETALTVPNIRYVIDLGFARISRYNYRSRIQRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFNSRPEFTEPEILRTNLASVILQMERLQLGDVNAFDFITPPDLRLVNDGRKLLIELGALDDKSFTKTRVRKGRTQLSSLTKIGQQMAKMPIDPRLARMLVAGDAFDCLADILIIVSALAVQDVRERPINKHAQADQKHALFRKEDSDFLFYLELFAALFDQHSTNDNQALSSNARRNFAKKHYLSYARIREWQKTHRQLSEMMAEMGFEINKQKNHQNGVKTDTKKGTRLSLKPGTSRQKSIKQALVGAKTLKHGTDDKTSIHYANIHRALLSALLSFVAHKTDTVGEYLMARSQKARIFPASTLHKKGAQWVMAFEVVETSQVYMRTLAKIEPEWIIKAAPNLLKYHYFEPHWSKKAGRVRAYAQISLFGLIVIAKELVNFEQIDLVQAREIFIRDALVANQYGMQMKFLADNANKIKDIERIEDKLRRRDLLVDEESLYQFYDAKIPNHIASRKSFEEFYYDAENKTPNFLHFSDEDVLNEAVDDSREFPESWHLGGVRLPLSYVFDPAADNDGVTVHVPIKALAQVDPVALLWGISGWRYELVLQLLKTLPKEIRRQIVPIPDTCQKIFHQLDASSKMGLLDQLVAALKTLGVQAHAQDFAPDKVEDYLRPLICVVDDKNRVIEKSRDLPKLQARHRKASVQSIAIEQGVHHHFPNHFNFVKNKHTSGIVMQEFSALKADAAQSAVFIATFTEMNAALAEHKKGVLTLIKGHLGAKQKQLTGQIDKAFKLAFAPLGDLEKLKNIVVHATLEACLYDYGPDFDHKPVSQHGDHARAAIAGLITQNNQWLISHLPLDEREFDDCQDLILKNFLLVGQEILRNLKEIYTAWQTARGKLLMLDQEIFGENIEDIEDQLDDLRLANFVYQTDYRHWRQYPRYLQALNIRLDRLQHNLEADLDAVYLLDTHMERLARCVKNPKFAEYRWLVEEYRINLFAQPMKTVQPVSAKRLETLWANLTTQ*	common_virus_hmm	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0041	persistent	direct	high	4172	1.0	GCA_001679345.1_00614
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	660747	661436	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	31896	32585	GCA_001679345_1_1_630	GCA_001679345_1_1_630	+	1120865	.	TIGR02796	TolQ protein. TolQ is one of the essential components of the Tol-Pal system. Together with TolR, it harnesses protonmotive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this model describes specificially TolQ per se, as found in tol-pal operons. A close homolog, excluded from this model, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MNESISLISLVIEASVVVKLVMAILLLLSTISWVLIFHLGTKIGGIAKFDKRFERWFWTDDIDHQLSVVQAESERAGLELIFYTGFYDQNHQDQDSSLSDDKKVQIVERRLRMALGSEQVHLEKGLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQAESVGLATVAPSIAEALIATALGLFAAIPATMAYNHFATKSNTLYENRSLFCEGLISALVTNLAKKNTASTL*	mmseqs_cdd	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0042	persistent	direct	high	689	0.999	GCA_001679345.1_00615
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	661462	661896	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	32611	33045	GCA_001679345_1_1_631	GCA_001679345_1_1_631	+	1120865	.	TIGR02801	TolR protein. The model describes the inner membrane protein TolR, part of the TolR/TolQ complex that transduces energy from the proton-motive force, through TolA, to an outer membrane complex made up of TolB and Pal (peptidoglycan-associated lipoprotein). The complex is required to maintain outer membrane integrity, and defects may cause a defect in the import of some organic compounds in addition to the resulting morphologic. While several gene pairs homologous to talR and tolQ may be found in a single genome, but the scope of this model is set to favor finding only bone fide TolR, supported by operon structure as well as by score. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MVTSNRFARRQRPLNSDMNVVPYIDVMLVLLVIFIVTAPMLATGIEVSLPKEQTKPITQADKLPVIVSIQADGNLYVSHKNAIDVPITPDKLDTLLRQMHQDNTDLQVMVNADADNAYSRIMQIMALIQNVGITQVSLLSESVQ*	mmseqs_cdd	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0043	persistent	direct	high	434	0.998	GCA_001679345.1_00616
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	661927	662727	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	33076	33876	GCA_001679345_1_1_632	GCA_001679345_1_1_632	+	1120865	.	4G7X_B	Putative uncharacterized protein, TolA protein	MRLSDNHPTVNFDKSALILPILASVLLHTVIIIAVAAPLITPPTKPNTTIQTALVGQEAFNRAKTALSNHHANQNKPTATNTSSTITANDNDNAFMQAQNQHRYHPQVSTSATTTQAYHPPPNSAPFESNSPNIQNQPTNAHAKLAEYSNHVSDLEQSNHTESTPSRAQINAAITSVKHRIEAIWQRYPKQPNQTITFQVNMNQQGDVTSIQFGGGHPDLRESVEAAVYAAAPFYELGGMRDSIRLQFTTEQLIMDNNQTTNEPNH*	hhsuite_tools	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0044	persistent	direct	high	800	0.999	GCA_001679345.1_00617
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	662744	664006	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	33893	35155	GCA_001679345_1_1_633	GCA_001679345_1_1_633	+	1120865	.	TIGR02800	tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MKSPITKVCLALTISFSAALTHTYADDELIVISEQVAPSQYPVAVMPFSEAHQMSHYLSLAGLGTTHQNLPQHTQTNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEIIDTANGLVSVKHTQISDNHPASIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNKISSLKLIDPSGQLIRTLDTVNGSIITPTFSPDGLSIAYSVQTKNNLPIIYIVSVSGGTPKLVTPFWGHNLAPSFSPDGGSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPNYLADASGFIYTADKGTRRQSLYRYDFGTTHSTQIASYATNPRLSPDGSKLVYLSGGQIIIANTKGRIQQSFRVLGTDVSASFSPSGTRIIYTSNQGNKNQLMIRSLSSNAIRTIPTSGTVRDPIWSK*	mmseqs_cdd	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0045	persistent	direct	high	1262	0.999	GCA_001679345.1_00618
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	664272	667826	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	35421	38975	GCA_001679345_1_1_634	GCA_001679345_1_1_634	-	1120865	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MIDTFKPKLDLPTKANFKTTLPLLGGADLSFWLALAAKSEERLIVMIANHQNELNQLDTELSFFGIDAHVFPDWEILAYDQLSVHQDIISERIALLTRMPTTGVLLVSTQTLMQRIAPPSWLIGQHFDLAVGDKFDIHEQRLRLTKAGYVQTENVFEPGEFAVRGSIVDIFAVGQSLPFRLDLFDDNIETIKFFDPDSQRTLSDNDLAQLKKDAQAGMNTHHAQKLPSSAKITEFRLLPAREFPLEEGKEMFRQNFASLFPNASARKIEFYNDVMAAIAPQGIEFYAPLFFELDAWMKTGNLFSYLPDDTLVVSHDNLSACHDEYYQQIQARHHSRAHDKSLPIMPPDYLFLANNEFHQVLKAYPRVVINTNHDTAKIGAMESLPPPILPINHQAAKPLSELLSFIKSGQVPILLVAESAGRREIILELLKDKVAVKVVDNYQEFINNLDDFNTDCIALSVAPIERGLWLRDETGGLCIISETQIFGRQVLQTRRRRQSSVSQAFLIKSVTELTEGALVVHLEHGIGRYQGLVVLDVGEGEQEFIHLKYADDASIYVPITNLALIGRYSGSDLQTVSLSKIGSGKWEKAKLKALEQIHDVAAELLNVQARRNAKSGISFDIDMSQYELFASQFAFEETIDQAEAIHAVMHDMKQNKPMDRLICGDVGFGKTEVAMRAAFIAVQAGYQVAVLVPTTLLAGQHEDSFLNRFADWPIKIESLSRFGNKKHQDAILAGLADGTVDIVIGTHKLIQDDVKFKQLGLMIIDEEHRFGVRHKERIKALQTNIDSLSMTATPIPRTLNMALSGMQDISIIATPPARRLAIKTFLLPKSDETIKEAILREILRGGQVYYLHNDVASIEAAADTLRELVGEARVAVAHGQMNERELSVVMNDFYHKKFNVLVASTIIETGIDVPNANTIIIHRADKFGIAQLHQLRGRVGRSHHQAYCYLMVPSLKGLSSDAKKRLNAITRANTLGAGFMLASEDLEIRGAGEILGKEQSGNMQTIGFGLYMDMLERATNAIKQGKTPSLATPLDLVSDIDIHASALIPDEYLGDVHERLVFYKRISSLDDVNQLIDIRTEMIDRFGTLPTQTQNLFAVHRIRIRAKALGITKIDATQTTISIEFRADTPIDGLAIIKLIQSNDGYRMNGATAIRYTSQELMDTQARIDKVNELLLYFESTKTA*	common_virus_hmm	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0046	persistent	direct	high	3554	1.0	GCA_001679345.1_00619
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	667831	668493	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	38980	39642	GCA_001679345_1_1_635	GCA_001679345_1_1_635	-	1120865	.	PRK00043	thiamine phosphate synthase. 	MTLQSIDKVPKLYLLTNDDELTTLLDKLERVFDTGAVSLLQVRRKSTLKLYDLATVYREAEMIVSLANDYDIKVVMNDSLELASHFGTGLHLGQRDGSVRVAREILGDHVVIGRTCHTDLALFKEAKREGATYGAMGTAFASITKPRAKIISKDILKKACELDFPLCVIGGITLENIHQLRDKLNGAAIDYIAVTADIMGHSVDTIADKCLAWQQKLNTW*	mmseqs_cdd	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0047	persistent	direct	high	662	0.998	GCA_001679345.1_00620
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	668647	669084	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	39796	40233	GCA_001679345_1_1_636	GCA_001679345_1_1_636	-	1120865	.	6AF2_D	HIT domain-containing protein	MFQLHPTLAKDTFLVGDFPLSTVRLMNDCQFPWLILVPRVSGIKEIYELSAADQVQFLRESSWVSSQMAKIFGADKMNVAALGNQVLQLHFHHIVRYQNDAAWPNPVWGHEAMPYTQEVLSHMQQTLMMALRGHHQMPFDWKMDV*	hhsuite_tools	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0048	persistent	direct	high	437	0.998	GCA_001679345.1_00621
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	669660	669857	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	40809	41006	GCA_001679345_1_1_637	GCA_001679345_1_1_637	+	1120865	.	PFAM:PF16777.4	transcriptional-regulator	MPKIVANPKTRAQIQKDSDARRGVKPIGFKVPIEFAELLDELAKQSGKTKNIIIMEAVELWAKQL*	phrogs_hmm	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0049	persistent	direct	high	197	0.995	GCA_001679345.1_00622
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	670122	670526	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	41271	41675	GCA_001679345_1_1_638	GCA_001679345_1_1_638	+	1120865	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MLYPIAILKGGDKTAHGIFFPDVPNLASACDELQDIHKMALECLDVHFSGLVADGEEIPLPTNFDAHTQNSQFDGMMWAWVDVDLSKYDVKSHKINITLPNHLIAKIDGKVTAHKSLYKSRSNYLAQLAMADLA*	mmseqs_cdd	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0050	shell	direct	high	404	0.998	GCA_001679345.1_00623
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	670932	671147	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	42081	42296	GCA_001679345_1_1_639	GCA_001679345_1_1_639	+	1120865	.	.	hypothetical protein	MTDSTTSPARQKATNTYRQKALANIALVISHTEPHALDALNQIMAHKDCSKAMAIKVALVEYANTLSQTSR*	.	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0051	shell	direct	high	215	0.995	GCA_001679345.1_00624
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	671263	671808	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	42412	42957	GCA_001679345_1_1_640	GCA_001679345_1_1_640	-	1120865	.	COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ribosomal structure and biogenesis]. 	MSQFSDALIHIVLFSPKIPNNTGSIIRLCANTGAQLHLVKPLGFELDDTRLKRAGLDYHEYATLSVHDNWQETKSALKSLGVERIVAMTTKFSRPFYEYQFKLDNDQHKVALVFGSETDGLPEEVRADIGANHWLRLPMLPDSRSLNLANSVGICLYEVWRQLGFVGDIGQSVGYHKPTSR*	mmseqs_cdd	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0052	persistent	direct	high	545	0.998	GCA_001679345.1_00625
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	672056	672196	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	43205	43345	GCA_001679345_1_1_641	GCA_001679345_1_1_641	+	1120865	.	COG5510	Predicted small secreted protein  [Function unknown]. 	MKKVLVASIAAVVVLTGCNAIKGFGKDVSKAGEAVSDTAQKVEKKI*	mmseqs_cdd	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0053	persistent	direct	high	140	0.993	GCA_001679345.1_00626
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	672278	673453	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	43427	44602	GCA_001679345_1_1_642	GCA_001679345_1_1_642	-	1120865	.	COG0635	Coproporphyrinogen III oxidase or related Fe-S oxidoreductase [Coenzyme transport and metabolism]. 	MYPDLLDPAHIPLSLYIHIPWCVKKCPYCDFNSHALPSQVPFENYIEALLSDAVSQQSLVSNRQIDTVFIGGGTPSLLPIESFKRLFDGLRLIYDFAPTCEITLEANPGTLEHSPFDEYLTIGINRLSIGVQSFDHNALTVLGRIHNPDQASNAIRAARIAGFDRVNADLMYGLPNQNPSKAVNDIQTAIDAGATHLSWYQLTIEPNTTFYCTPPQLPDEEIMAEIETLGQSVLTKHGFYNYEVSAWHGPNDAPCQHNLNYWQFGDYLAIGAGAHGKLTLKNHPDYQDGIYRYQKSRQPKDYLAFEDAPKMVNFERISDDNLPFEFMMNALRLKDGVSTDVFETRTGLLISTIDNEMLPLQHQGLMVLDPLRIAPTRLGFRYVNYLVSQFI*	mmseqs_cdd	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0054	persistent	direct	high	1175	0.999	GCA_001679345.1_00627
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	673467	674642	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	44616	45791	GCA_001679345_1_1_643	GCA_001679345_1_1_643	-	1120865	.	PDB:1OYW_A	ATP-dependent-DNA-helicase	MTETTVKNFDDLPLSEPILKAVQALKFDQLTPIQAQILPHTLANQDAIGQAQTGTGKTATFLITIIESLLKRPFQADEIRYLGEPRALVLAPTRELAQQILADCRELTRFSQLYNLCITGGSDFDKQLEQLHKRPLDILIGTPGRIIDWVNKGELFLDRVEVFVLDEADRMLDMGFIPDIKRIVRHMPSNTERQSLLFSATFNQDVMNLAYRWLHQPAFVEIAPESKTNQAIDQQFYLVTEREKTSALKQILADDSVKKTIIFANRKDQVKRLYDYLRRHHKVTMLSGDVAQQKRERYLQRFKDGEVNVLVATDVAGRGIHVDDVTHVINYTLPDMPDDYVHRIGRTGRAGLSGVSISFVSENDAFNLPALERHIDQKFKLNQFEFLDEHK*	common_virus_hmm	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0055	persistent	direct	high	1175	0.999	GCA_001679345.1_00628
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	674673	675113	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	45822	46262	GCA_001679345_1_1_644	GCA_001679345_1_1_644	-	1120865	.	.	hypothetical protein	MMMKNKWMRGLAILVLSLPTVTYAKTAAPKASEAPEVSLTQEEQMAIDFCDFSAYGVMHIAGDHQGGATKSEALTNHDKRMAELKDLIDLDPETATMLDKYWKGAIDRIFQESVQKTDAEKQAFVMGVGESSFYSCLDQVLKTPKN*	.	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0056	persistent	direct	high	440	0.998	GCA_001679345.1_00629
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	675463	676341	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	46612	47490	GCA_001679345_1_1_645	GCA_001679345_1_1_645	+	1120865	.	TIGR02139	sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]	MLNQPIPLKNRARRVMPFFGLSMGISIFALGLLVILPFLMMILTTLQMSFDDIMQTIREPQVFAAIKLSLSMAMLATLTNLIFGTLAAWVLVRYEFWGKSSLNALVDLPFALPTAVTGIALATLYAPNGLFGQWFTHLGILLFNEPIKIAFTPIGIWLALVVVSFPFIVRAVQPVLAELSVEFEEAAAVMGAGRLTTFCRVILPEISPAMLIGAGMMFARATGEYGSVIFIAGNIPMQSEILPLIIVSKLEQFDVAGAACVSLFMLLISLVFLFTMNFIQWKLSARLGAKTN*	mmseqs_cdd	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0057	persistent	direct	high	878	0.999	GCA_001679345.1_00630
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	676386	677225	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	47535	48374	GCA_001679345_1_1_646	GCA_001679345_1_1_646	+	1120865	.	COG4208	ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]. 	MSHTSSYSYQKNPATRDKPWVRWSLIGIAVVFMGVMLVVPLVSVFYEALKEGWQAYQAALLEPDALASIKLTLITAAIILPINTIIGVALAYLITRHQFRGKFVITTLLDLPFAVSPVVAGLMFVLVFGANTRLGGYLESMGIQVIFATTGIVLATLFVTFAFIARELIPLMQAQGDSEEQAALTLGANGWQMFWKVTLPNIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLMIEIAYNEYAFTLAFALSSLLALLALITLVAQGLMSHKK*	mmseqs_cdd	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0058	persistent	direct	high	839	0.999	GCA_001679345.1_00631
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	677318	678037	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	48467	49186	GCA_001679345_1_1_647	GCA_001679345_1_1_647	+	1120865	.	COG1118	ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]. 	MSIKIQNIHKTFGDFVALGEISIDISTGELTTLLGPSGCGKTTLLRIIAGLENADNGRIYFDSIDVTDIPVQHRGIGFVFQQYALFRHQTVAQNIAFGLTLLPRNTRPSANTIDRRVDELLDLVQLSHTKTRYPHELSGGQRQRVALARALATEPKLLLLDEPFGALDAKVRKSLRDSLKDIQREIGITSILVTHDQEEAQAISDKIVIMNYGQIEQIGTPSKLFAQPSSDFVVDFLGL*	mmseqs_cdd	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0059	persistent	direct	high	719	0.999	GCA_001679345.1_00632
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	678079	679497	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	49228	50646	GCA_001679345_1_1_648	GCA_001679345_1_1_648	-	1120865	.	PDB:3BH0_A	Helicase-ATPase	MAKAKSSYICQNCGAIYGKWAGQCTDCGEWNTLVEAPNTSLPHHHKSKTTTAPRKTANYAGAVSAVMTLDHVGVTLETRMPTGIGEFDRVLGGGLVAGSVVLIGGDPGIGKSTILLQTAINMAAGDSLSGSALYITGEESLSQVAMRAVRLGLPTDRLRVLAETNVDTICAALTTEQPAIAVIDSIQTLFTEAIQSAPGGVAQIRESAAVLTRYAKQTGTALFLVGHVTKEGALAGPRVLEHMVDTVLYFEGESDSRFRMIRAIKNRFGAVNELGIFGMTDTGLKEVANPSAIFLSRYDKPIAGSVVMVSREGTRPLLVEVQALVDDSQGQPRRMALGFDYQRLSMLLAVMHRHGGIHTSGMDVYVNVVGGVKVMETGSDLAVLIACASSIKEKPLPVRLCVFGEVGLSGEIRPVPNGQERLKEAMKHGFTHAIVPRANAPAANHPQFKNIQIIAVDRLDEAIYQAFEINAG*	rep_hall_hmm	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0060	persistent	direct	high	1418	0.999	GCA_001679345.1_00633
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	679795	681627	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	50944	52776	GCA_001679345_1_1_649	GCA_001679345_1_1_649	+	1120865	.	COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent [Energy production and conversion]. 	MTAKITAPDFVRHQALIHWVAEIAALTKPAAIEWCDGSEEENQRLIDLMIKNGTMIKLNEDKHPNSYLAFSDPTDVARVEDRTYICSKEEIDAGATNNWVEPSQMRTKLNDLFDGCMAGRTMYVVPFSMGPLGSHIAHIGIEITDSPYVVVSMRKMARMGKEVYDVLGADGEYVPCVHTVGSPLTEGQKDVAWPCNDDKYIVHFPETREIWSYGSGYGGNALLGKKCLALRIASAMGREQGWLAEHMLILGVTNPQGKKHYIAAAFPSACGKTNFAMLIPPAGYEGWKVETVGDDIAWIKPSEDGKLYAINPEAGFFGVAPGTNTKTNSNCMSTLGSDVIYTNVAVTDDGEVWWEGKTKETPANLTNWKREPHTGAERAAHANARFTVSAKQCPSIDPQWENPEGVPISAFIFGGRRADTVPLVSEAFDWVDGVYKAATMGSETTAAATGQQGVVRRDPFAMLPFTGYNMADYFNHWLQMGENLGKKTKAAGNQLPKMFKVNWFRRDTNGDFVWPGFGQNMRVLQWIIERCEGTANAVRTPIGLVPTYDDINWDQSDFTKAQFELVTSQDKDAWIKELESHAELFDKLGERMPTALKAHNAKLKADIEQA*	mmseqs_cdd	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0061	persistent	direct	high	1832	0.999	GCA_001679345.1_00634
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	681784	684663	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	52933	55812	GCA_001679345_1_1_650	GCA_001679345_1_1_650	-	1120865	.	PDB:5EMI_A	Cell-wall-hydrolase-autolysin	MKKHTKSSISTQILKPLSLAISSCILVACSSTGTPAKPVSQTPKPIPQAKPSQQINISSGNTNLGNTKTGADVDVLDVQMLDALEALLQATDMSMVEGDELAIQRYGNLWDRVRRGYRINEMTNARIEAQKSWFYTRQTYLDRLTARASRYLHHTVAEAERRGIPSELALLPIIESSYDPTATSNAAAAGLWQFIPSTGRIYGLNQSATYDGRRDVIESTRAAYDFLTSLYNQFGSWELALAAYNAGPGRVSRAIKANQDQGLPTDYWSLKLPTETMNYVPRFLAVAQIVRSPNTYGINLPAIANHSHFRTVPVNYGVSLSEVATVTGLSVSELRLLNPALLNFTVDEIGPNRIVIPDSLPNQIDNQLASLKGYGFGGDYIATAPAQSITYVVPKSGATANTSSQQELIAANTLPTTIAQVTPNNTIVQEPALSKSEINLIAAEIQKTSPEVPAISPQDGNIQLNAVQTGQSVLDARGETKMLSFADGPKTQAVAQQPTQPVQVAVTPPAQPVQITVVSPTPEPISQPKPQLPPVTASIPVVSSPPVLVPPPPSRPRPEPASRPKPKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKRQPVSAQTPSRQSTSTANTNSATHKVSAGESLTAIARKYNISLHALAKENGLSVTDGVLIGQTLKLPSDAKIANNTMANTSSSPSVNKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKRQPVSAQQTSQATQSTKNNQSTQSTATHRVQSGESLTAIARKYNISLHALAKENGLSVTDGVLIGQTLKLPSDAKAESSTPSRLGNTKNNSTRTPANTNIGITENYTVRSGDSLTMLSNRFGVAIGDLATANGLASNANLRIGQTLKVPKLTTTYTVKAGDGLIALARRYGISTQELAKMNNLEPTADLRIGQVLTVPNK*	common_virus_hmm	common_virus	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0062	persistent	direct	high	2879	1.0	GCA_001679345.1_00635
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	684858	685463	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	56007	56612	GCA_001679345_1_1_651	GCA_001679345_1_1_651	-	1120865	.	PF13474.6	SnoaL-like domain	MAYSFIDKYIEYKGWFMKYSTRSVLRKAVAASMLTAVIRSAIQLTGRSFGKGASIGLFIGMIGVQSLITTNAYAISEQDVSRYASSMSSAANAQNIAQISRLIDDDAIISLSRGGKTTSLDKEGYLQLLQKSWATSSDYRYRINVADVVVTGNQARAQIVTTETWTQDGKPVTIKTASRATFSQVGNNAVLLRSVSQVTVD*	hhsuite_tools	hypothetical_protein	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0063	persistent	direct	moderate	558	0.921	GCA_001679345.1_00636
GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote	cenote	CDS	685569	686777	GCA_001679345.1	LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345.1_LZYD01000001.1	GCA_001679345.1|LZYD01000001.1	GCA_001679345_1_1	GCA_001679345_1_1@C43	56718	57926	GCA_001679345_1_1_652	GCA_001679345_1_1_652	-	1120865	.	COG4536	Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains [Inorganic ion transport and metabolism]. 	MPRPRTQNLANLSFVSIAIFTVSVAAIFIPSTAFAAFELGGTPTNLALLIFFICLSLVVSFLCSISEATLLTMTPSYIDTLEEDNPKGAALLKSVKVDHIEKSISAILTLNTVAHTLGSLGAGAQAVIVFGNAWFGVFSGVMTLIILIGTEIIPKTIGTVYWRRFAMPVAYYVRTINVALLPVIWVTEKISRMLTRGNQEIGFNRHEFLALANQGESLGQMSEMETRIIKNSLALGMINVEDILTPRSVVSAFDENMTVGDVFASYPKLPFSRFPIFDEDLDNATGFILKSDLLIAKANQEIHTPIKQFRRDINFVFAKMKLFDLLDLMLKEQVHIALAVGEFGEVKGLVSLEDVLETLLGLEIVDEFDRVDDMQILARQLMDKRMARLGAKLEEDAPFDEK*	mmseqs_cdd	nonviral_gene	C43	57926	628852	686778	GCA_001679345.1|LZYD01000001.1@region_628853_686778@tool_cenote_CDS_0064	persistent	direct	high	1208	0.999	GCA_001679345.1_00637