core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote	cenote	CDS	45270	45542	GCA_001807295.1	KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295.1_KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295_1_46	GCA_001807295_1_46@C2	1	273	GCA_001807295_1_46_41	GCA_001807295_1_46_41	-	77899	.	COG1396	Transcriptional regulator, contains XRE-family HTH domain [Transcription]. 	MWDVTDRIRKAREVAGLKQSELAAELGMSRTVIAAVEQGVRAPRRGELIAISFATGVSLEWLENSETPAPEGPGGGSECAIRDLNPEPTD*	mmseqs_cdd	nonviral_gene	C2	14542	45270	59812	GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote	cenote	CDS	45884	45994	GCA_001807295.1	KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295.1_KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295_1_46	GCA_001807295_1_46@C2	615	725	GCA_001807295_1_46_42	GCA_001807295_1_46_42	+	77899	.	.	hypothetical protein	MGISLSIVGIGIATMYLMWNGDQAHAANMEGDACER*	.	hypothetical_protein	C2	14542	45270	59812	GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote_CDS_0002	cloud	direct	high	110	0.991	GCA_001807295.1_01976
GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote	cenote	CDS	45984	46220	GCA_001807295.1	KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295.1_KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295_1_46	GCA_001807295_1_46@C2	715	951	GCA_001807295_1_46_43	GCA_001807295_1_46_43	+	77899	.	.	hypothetical protein	MNVRPHLGTAAARVYEVLVNRHPGEVPPLLIAIGNDEQIDAVMLDPNAPDMHHMTMPTRDELLAAAVKLSELAAALED*	.	hypothetical_protein	C2	14542	45270	59812	GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote_CDS_0003	cloud	direct	high	236	0.996	GCA_001807295.1_01977
GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote	cenote	CDS	46220	47539	GCA_001807295.1	KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295.1_KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295_1_46	GCA_001807295_1_46@C2	951	2270	GCA_001807295_1_46_44	GCA_001807295_1_46_44	+	77899	.	PFAM:PF12789.6	tail-fiber-protein	MRTLLIDIYDVTAQPITGDSITLEAPATRAAESGAVIRPYSRLVELVDGKATVEVDPGPLDIKFHNNFGRQVVINATVPDGGDPITLRELILMDIGTLDDVPGIRDALDAKADADNAVTLDAFADALADKADLLHGHALDGIIGLQDALDDKAAQGHGHALDDVRGLRDVLDAKLEAADFDDRTNQLIRIATDALVDGATEALDTLKEIAIELAKDDDPVAALVRTVAGKAEKSHTHAIGDVTGLQTALDGKASQATVDTALAGKAEKSHTHRMNDITNLPNLTSVVQPNALILRDSNGSASIADPTGDRHIANKKYVDAQVDGVMRCETIVTASTLGVTAGRLNLNSNTRFIKHSFNSSSQHQYNIPANALTTITSAGTGSVAVAAYRANGSSGRIEFGELTAAGQACTFHTLNTANIYFETTDFSGSLVITVLIPKA*	phrogs_hmm	hypothetical_protein	C2	14542	45270	59812	GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote_CDS_0004	cloud	direct	high	1319	0.999	GCA_001807295.1_01978
GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote	cenote	CDS	48962	49282	GCA_001807295.1	KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295.1_KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295_1_46	GCA_001807295_1_46@C2	3693	4013	GCA_001807295_1_46_45	GCA_001807295_1_46_45	+	77899	.	.	hypothetical protein	MTNALFNITSAPREPGRHEQALDDTLAAARDAQLVDDIDDALISIARANAWALDAAEAEGKPYAVAQVSGPYREVLESLRLTPADRKADANDELNRALAELRESNL*	.	hypothetical_protein	C2	14542	45270	59812	GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote_CDS_0005	cloud	direct	high	320	0.997	GCA_001807295.1_01980
GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote	cenote	CDS	49395	50702	GCA_001807295.1	KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295.1_KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295_1_46	GCA_001807295_1_46@C2	4126	5433	GCA_001807295_1_46_46	GCA_001807295_1_46_46	+	77899	.	PFAM:PF03354.14	Large-Terminase	MPWQRLAAHIIGARLPNGRPKWPFIVITVPRQSGKTTICSAVQFHKALALPGAKVWYTCDTGQKARQKWLELVDDVQASPFHSPFVKVLKTNGSEALKIPSLRSQVRPHPPNEDSLHGEQSDLNIIDEGWSFDEVEAANLMQAITPSQATRAHRQTIVISTMGSATSTWFHNLVDQGYSRDPGIFLLDYGIPFDADPTDLDIVAECHPAFGQTIDRDALESALAQLGPSGFARGYGNLRTGARETLFPARVLAQAATDAEMPADVDAVLGAAIDIDRTETAIAAAAMVDGVPFVEILDVRPGTSWGVKRLKHYQELSDSLIVIDEIGPSSTLLADAKREKLKATSPTARELTTASAEVFDRLMHVDGEGMADPRIKFRSDPALDLAFQIVDRRKLGDSWTWSRQKSSGSIAALEAATLALHGLLTQKKSVKPFIR*	hallmark_hmm	common_virus	C2	14542	45270	59812	GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote_CDS_0006	cloud	direct	high	1308	1.0	GCA_001807295.1_01981
GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote	cenote	CDS	50712	50894	GCA_001807295.1	KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295.1_KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295_1_46	GCA_001807295_1_46@C2	5443	5625	GCA_001807295_1_46_47	GCA_001807295_1_46_47	+	77899	.	.	hypothetical protein	MPRIDSSFYSHVIGCDYCEWRTVAPTPATAWKLLAVHLKGVHNDAPAASHALEMMRRRSR*	.	hypothetical_protein	C2	14542	45270	59812	GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote_CDS_0007	cloud	direct	high	182	0.995	GCA_001807295.1_01982
GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote	cenote	CDS	50940	52046	GCA_001807295.1	KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295.1_KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295_1_46	GCA_001807295_1_46@C2	5671	6777	GCA_001807295_1_46_48	GCA_001807295_1_46_48	+	77899	.	PDB:3KDR_A	Portal-Protein	MGLIDRLRRLTSLPQQFAAAQYGSPWANSAHLAIADFPDLEDSAINRDYAMQIPALLRARNLVVTTIARVPLTAVEGTAPAWIAGTVPSTGKPQTEFYRMLWTADDLFFYGRSAWAIERDAQGVPTVAIHIPLALWNYSAEGDVIVDGEVADPAEVCTFSGIHAGILEHGADALRDAHRLNRASARVADAPAALTELRQTNDAILNDDEIDALIARYVQARQGRRHGVSYSSPGVEVVEHSLAPENLLIAGRNAATVDIARLANLPAPFIDATVGGTSLSYENSASRMTELIAFGLSPTLAAITARLNLADMNPAGAKIRFDTERILDDIPTAATPNLAPNQNAGPGAGSPNKGGAKLTPVTEGARHA*	hallmark_hmm	common_virus	C2	14542	45270	59812	GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote_CDS_0008	cloud	direct	high	1106	0.999	GCA_001807295.1_01983
GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote	cenote	CDS	52039	52605	GCA_001807295.1	KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295.1_KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295_1_46	GCA_001807295_1_46@C2	6770	7336	GCA_001807295_1_46_49	GCA_001807295_1_46_49	+	77899	.	PDB:4KNK_A	Bifunctional-autolysin	MPNAYKTTHTLLTANDDGIAGTRRLLAVHTFEGQDLDAVAMARRQQSPAAAGSYHLVIDRDGASARENDDEYIPWAAMYTGNRAAFHFSLAGRAAMTRDEWLARPAQLETLAQVLAAYSKAYGIPLIRRDAADVARGAWGVCGHADISGAWHESDHTDPGPGFPFDVVIDRAKAILAEALDPNRCTPN*	common_virus_hmm	common_virus	C2	14542	45270	59812	GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote_CDS_0009	cloud	direct	high	566	0.998	GCA_001807295.1_01984
GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote	cenote	CDS	52695	52817	GCA_001807295.1	KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295.1_KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295_1_46	GCA_001807295_1_46@C2	7426	7548	GCA_001807295_1_46_50	GCA_001807295_1_46_50	+	77899	.	.	hypothetical protein	MTIVIASIIGFSSGLAGGGLALLAFGVWLAAGLPDYDHHN*	.	hypothetical_protein	C2	14542	45270	59812	GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote_CDS_0010	.	unmatched_CDS	none	0	0	.
GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote	cenote	CDS	53085	53639	GCA_001807295.1	KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295.1_KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295_1_46	GCA_001807295_1_46@C2	7816	8370	GCA_001807295_1_46_51	GCA_001807295_1_46_51	+	77899	.	CDD:TIGR01543	phage-prohead-protease	MNLKAAAPVTRFINPDFLTAAADTMTAPGTDSRTLTGLVLPFGKPGRTSAGRLTVDANAVTLPDDIGRVKLYRDHSDQGGTPVGRAVAAEVRDDGLFMSFRIGATPDGDAAITDIVEGIRDALSVELVDAQHAGGKLTAAQLTAVAIVPVPAFDDARVTGASFAKRDEDEQEPPPERPRSPRRG*	hallmark_hmm	common_virus	C2	14542	45270	59812	GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote_CDS_0011	cloud	direct	high	554	0.998	GCA_001807295.1_01986
GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote	cenote	CDS	53765	54652	GCA_001807295.1	KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295.1_KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295_1_46	GCA_001807295_1_46@C2	8496	9383	GCA_001807295_1_46_52	GCA_001807295_1_46_52	+	77899	.	PDB:8ECO_D	Major-Capsid-Protein	MKLTTVSEIIASKINGTDTVNGVTVTAALAEVTQAAQPAVQNEEWLGELFAAAPFERLIVPTMKQRSLTRMKLRGWRWKETPKVDDYAGNLQEIPTNEITTEPVEVDAQRIAGGHKIDRKFIDFADSEFIESYLREMANSYKEKTDVHAVEFIVTEGDKVAEAGSQPTLLHAAAKANQIIKKKLRKDATTFLVNTDDMFKLFDITLMDQPQYLALFNIDPAKFIADDAVPAGHVVAYHRDSLAFGELPGSPIRVDALDIAHGGSDNALFGYWAALLEDPRGLTTVPFGAKADAGA*	hallmark_hmm	common_virus	C2	14542	45270	59812	GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote_CDS_0012	cloud	direct	high	887	0.999	GCA_001807295.1_01987
GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote	cenote	CDS	54655	54966	GCA_001807295.1	KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295.1_KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295_1_46	GCA_001807295_1_46@C2	9386	9697	GCA_001807295_1_46_53	GCA_001807295_1_46_53	+	77899	.	PDB:5A21_D	head-to-tail-adaptor	MAAEITLQDMAAHLGTSRPDETLREVIDATVELVEGWKGAPIAEWPERWRLGTMMLIARIDRRRQSPSGVDTVTEMGPVYIARKDPEVAQLLEIGTWRKPVVA*	hallmark_hmm	common_virus	C2	14542	45270	59812	GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote_CDS_0013	cloud	direct	high	311	0.997	GCA_001807295.1_01988
GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote	cenote	CDS	54963	55313	GCA_001807295.1	KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295.1_KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295_1_46	GCA_001807295_1_46@C2	9694	10044	GCA_001807295_1_46_54	GCA_001807295_1_46_54	+	77899	.	.	hypothetical protein	MIRAALDHVTGLLADAGIAATTDARNITAPGCFVTVTNIDDLTLDGSGRVTGEILAIVRDLGGDADIDNLSMLLDDVLDAVANSVVAIRDIDTAQQATPPSGGKLPAIRFTYTLYL*	.	hypothetical_protein	C2	14542	45270	59812	GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote_CDS_0014	cloud	direct	high	350	0.997	GCA_001807295.1_01989
GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote	cenote	CDS	55325	55732	GCA_001807295.1	KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295.1_KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295_1_46	GCA_001807295_1_46@C2	10056	10463	GCA_001807295_1_46_55	GCA_001807295_1_46_55	+	77899	.	PFAM:PF06199.10	tail-tube-protein	MAIKSYVVGPGTLTLSTPALDLAAQVTKCAVTPSVDREDPLHVLSGESRAGDSKYSATLDVTFLQDLSKSGIVDYSWQNAGKEVAFTYTPNTAEGAKVTGVITMDPVSIGGDVKSRATSDVSWQCTGLPKFAPKV*	hallmark_hmm	common_virus	C2	14542	45270	59812	GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote_CDS_0015	cloud	direct	high	407	0.998	GCA_001807295.1_01990
GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote	cenote	CDS	56169	56435	GCA_001807295.1	KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295.1_KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295_1_46	GCA_001807295_1_46@C2	10900	11166	GCA_001807295_1_46_56	GCA_001807295_1_46_56	+	77899	.	.	hypothetical protein	MKFLIKYIDAEREAQAVNVYHADRVAAEREGAKRGWPRMTETPASYLSLQVYKAARRAKLDNIPETWEDFADLVDDMEVIDDVENPTQ*	.	hypothetical_protein	C2	14542	45270	59812	GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote_CDS_0016	cloud	direct	high	266	0.996	GCA_001807295.1_01992
GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote	cenote	CDS	56556	58034	GCA_001807295.1	KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295.1_KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295_1_46	GCA_001807295_1_46@C2	11287	12765	GCA_001807295_1_46_57	GCA_001807295_1_46_57	+	77899	.	Uniprot:A0A0M4RRC2_9CAUD	tail-tape-measure-protein-	MAGKSPVLSVRIIADAAKAAAGFSEAEKQVGGFESKLSKIGGVVDKAAATATVAGGAYVAFAKQTVDAASAMEQSVGAVNSVFGEQADKVMATAEQAAQGVGLATSEYANMASIMGSQLQNMGIPMDEVAGQTDQLISLGADLAAMYGGTTSEAVDALSSLLRGERDPIERYAVSINQAAIDAELAAQGLSGLEGEAAKQAETQATLKLLFDQSSNALGTFSRESETVAGQQQRANAEWQNAKAALGEQLLPIVTEGARLLGALAGEIGKHPELFKIAGAAIITFTGALQGISVGIKAVEAGKIAFGALNTVISANPIGAFITVLGLAAAGIVTAYQHSETFRDIVHRAGEIAADAFGAVADWVSNVWDWIKSVIDAVADLIGWLRDAWDWAMDVARAVGDALSFSGDGPEMTMQLAAGSLFKFLPQSPDITAALTPDITAARVDNLAKQLPSANTPTAPVYNVTINGVLDADDAAVKIREVLNRYERRQAW*	hallmark_hmm	common_virus	C2	14542	45270	59812	GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote_CDS_0017	cloud	direct	high	1478	0.999	GCA_001807295.1_01993
GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote	cenote	CDS	58028	59104	GCA_001807295.1	KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295.1_KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295_1_46	GCA_001807295_1_46@C2	12759	13835	GCA_001807295_1_46_58	GCA_001807295_1_46_58	+	77899	.	.	hypothetical protein	MVDKFAQSIRLDINGTKYPFTPSDIVDGLKLTWGRDSLFEDPKKRSLSATLIVDYAAAVEMTNGSGHILGARVRVLKGSTLLFRGSIDTIEVAPVGGDQVRLDLHSVESTTWNYELSKTFNTRAATAKLLQASIDIQTGLPDVEIIDAVDPATKFIQPEQSIAVTVLQAYNALVESRPLARAIWLPDLSQVWPSYYNRNGAWVDARFTADQVAVEGWELYFEQNPLWVEFYTGGTFGEETMIKKFPVPGDAASAGTLQITNEWGVKAYKDWEVNGAKAVLAAQQTAPRKFTIAAENVSDEWMQPWETSRRFVIDRDTITGTNFYQRWEREHGGRYVPIGGTITVKHGRSTHEMTCVYA*	.	hypothetical_protein	C2	14542	45270	59812	GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote_CDS_0018	cloud	direct	high	1076	0.999	GCA_001807295.1_01994
GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote	cenote	CDS	59101	59811	GCA_001807295.1	KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295.1_KV788507.1	GCA_001807295.1|KV788507.1	GCA_001807295_1_46	GCA_001807295_1_46@C2	13832	14542	GCA_001807295_1_46_59	GCA_001807295_1_46_59	-	77899	.	PDB:1Z19_B	Integrase	MIETVGKPVDEVERGDLVEWLAAGQWAGDARASARASLRVFFKWCELNGYAANVAAELPTVRRPRSVPKPIPDALIVESMQRSYIDPRARLAIEIMATCGLRRDECCRVHSRDVEPVGRGWQLRVVGKGGHVRVVPCPPLLAQRIRAANGYLFVGDVDGHISAGWLGKLVSRVLPVGFTPHKLRHRFGTVVNDETRDIRAVQELLGHASLATTQVYVATNAERQRIAARTAWNIAS*	common_virus_hmm	common_virus	C2	14542	45270	59812	GCA_001807295.1|KV788507.1@region_45271_59812@tool_cenote_CDS_0019	cloud	direct	high	710	0.999	GCA_001807295.1_01995