core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001810105.1|KV799930.1@region_1_5259@tool_cenote	cenote	CDS	199	1368	GCA_001810105.1	KV799930.1	GCA_001810105.1|KV799930.1	GCA_001810105.1_KV799930.1	GCA_001810105.1|KV799930.1	GCA_001810105_1_30	GCA_001810105_1_30@C0	200	1369	GCA_001810105_1_30_1	GCA_001810105_1_30_1	-	23126	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MLYLITGVPGSGKTLKMISDLMNRSDLKNRPLYLDGIPEVNDKIIPNLPIPEGESMQTWHKWAPTGAILVIDECQRVFRPRPSGSKVPDFVAELETHRHRGIDIFLLTQHPRLIDVNVRSLIGHHCHIGKTSLGVRRMIEWERCANPESNSDVANGVKSVYKLDKKAFGVYKSAEEHTKIKTKLSKVVFIFPFVLGVILICCFYVWQSWKDISAPIEKPKTEVSALAESPKTDGTATAPAVDGTDGLGQYPKQETKAEEPPKHHISEDDFKPRIEDRPETAPMYDGMNKAVKTMPWPSACVKSDNGCNCYTDQGSKISEISKKTCLSYIKDGLPFNPYKTKQNEALTADSNSSVSEKPQVLTMGGKSPQNLMYDGYEEKALSNEGGKVN*	hallmark_hmm	common_virus	C0	5259.0	0	5259	GCA_001810105.1|KV799930.1@region_1_5259@tool_cenote_CDS_0001	cloud	direct	high	1169	0.999	GCA_001810105.1_00971
GCA_001810105.1|KV799930.1@region_1_5259@tool_cenote	cenote	CDS	1380	1658	GCA_001810105.1	KV799930.1	GCA_001810105.1|KV799930.1	GCA_001810105.1_KV799930.1	GCA_001810105.1|KV799930.1	GCA_001810105_1_30	GCA_001810105_1_30@C0	1381	1659	GCA_001810105_1_30_2	GCA_001810105_1_30_2	-	23126	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MWAKLLTSVLTTVAGKIMSAVGLSFITYVGLDALQNQLMQAVSQQVGGLTEDSLQVLYILGIGVCLNWIFGTFTFIASLKTMSKLSAIMASK*	hallmark_hmm	common_virus	C0	5259.0	0	5259	GCA_001810105.1|KV799930.1@region_1_5259@tool_cenote_CDS_0002	cloud	direct	high	278	0.996	GCA_001810105.1_00972
GCA_001810105.1|KV799930.1@region_1_5259@tool_cenote	cenote	CDS	1660	3441	GCA_001810105.1	KV799930.1	GCA_001810105.1|KV799930.1	GCA_001810105.1_KV799930.1	GCA_001810105.1|KV799930.1	GCA_001810105_1_30	GCA_001810105_1_30@C0	1661	3442	GCA_001810105_1_30_3	GCA_001810105_1_30_3	-	23126	.	pfam05616	Neisseria meningitidis TspB protein. This family consists of several Neisseria meningitidis TspB virulence factor proteins.	MNDTRSLFYSRRFALCSRLLVLVCFGTQVLNPLTVFAEVGLPPPAQHQNAGFPSDQALQRRGYDPKTGIWKVDVQNNGKPTVTKNGGNINGSQGKNVTVTGRYGETGTMNTTVNQRVGTGRLQTAANTVIVANAVNNSYTKNYASEAAKAFKNGNYLQAAHNSIMTLGATLDGILGGAIRDIATGIGNGLKEPQQYEQSQRQAEAEGNYQKAVAQAAAKKAAEAAQKAQQQDQQKKEEQKKDEEAKKKGLFKYQLIVEVDGSYQNYVFYAPDGYRLSGSDDNTLDHAPAYMGKFVSSYNIDLGKYASPSTIKVNTPSDKHIFVRWDSYKEGTVPEAEKEKLAQNQSQVKPEDFMLTQKEMLDILKRMLENNQTNHAELMNQLAKMGVMNQSAEQSTFSPDTALSAPYTPEGSSTPQQTRFKMNQDGTVGVDYVPRPDLKPNSPEAPNKPEKTTPSRQESPDTPNAPNSPNSPNTPNEPNSPNSPNNQQTPKQQENGLCSIFPNIAACADLGEVEAQEPEVPQNTIDIGSIKPTDTFKTDGVCPSPKTFDMGILGTFEMSYENVCYIASKIRPILILVTIISCGWAAYAAVKEL*	mmseqs_cdd	nonviral_gene	C0	5259.0	0	5259	GCA_001810105.1|KV799930.1@region_1_5259@tool_cenote_CDS_0003	cloud	direct	high	1781	0.999	GCA_001810105.1_00973
GCA_001810105.1|KV799930.1@region_1_5259@tool_cenote	cenote	CDS	3457	3759	GCA_001810105.1	KV799930.1	GCA_001810105.1|KV799930.1	GCA_001810105.1_KV799930.1	GCA_001810105.1|KV799930.1	GCA_001810105_1_30	GCA_001810105_1_30@C0	3458	3760	GCA_001810105_1_30_4	GCA_001810105_1_30_4	-	23126	.	.	hypothetical protein	MGYRVGQICYGTQIEAQNHVMSQVIPTIDKDGVLNHPVFIGSAWEYHGSQVKLNFPQCNNQDFYDQGRELGQSMLFAFIGLFIVVVCLKVVKLANMRNDE*	.	hypothetical_protein	C0	5259.0	0	5259	GCA_001810105.1|KV799930.1@region_1_5259@tool_cenote_CDS_0004	cloud	direct	high	302	0.997	GCA_001810105.1_00974
GCA_001810105.1|KV799930.1@region_1_5259@tool_cenote	cenote	CDS	3768	3992	GCA_001810105.1	KV799930.1	GCA_001810105.1|KV799930.1	GCA_001810105.1_KV799930.1	GCA_001810105.1|KV799930.1	GCA_001810105_1_30	GCA_001810105_1_30@C0	3769	3993	GCA_001810105_1_30_5	GCA_001810105_1_30_5	-	23126	.	CDD:PHA00979	putative-major-coat-protein	MNIMKLKTAARNAAATVAVAVMSAPALADTNLLDTASTEIGALKTGIIAFGAVVVGLAVVIATISVAKRVINKA*	hallmark_hmm	common_virus	C0	5259.0	0	5259	GCA_001810105.1|KV799930.1@region_1_5259@tool_cenote_CDS_0005	cloud	direct	high	224	0.996	GCA_001810105.1_00975
GCA_001810105.1|KV799930.1@region_1_5259@tool_cenote	cenote	CDS	4087	4356	GCA_001810105.1	KV799930.1	GCA_001810105.1|KV799930.1	GCA_001810105.1_KV799930.1	GCA_001810105.1|KV799930.1	GCA_001810105_1_30	GCA_001810105_1_30@C0	4088	4357	GCA_001810105_1_30_6	GCA_001810105_1_30_6	-	23126	.	.	hypothetical protein	MSENQTPKQGFFVTASFDRAFVKERKNADGTYVKVHYLGLLVRSEDGTQLCEVRTKNPEKYQHFKRDQVVTLEIHLRAFKDNVYYSDER*	.	hypothetical_protein	C0	5259.0	0	5259	GCA_001810105.1|KV799930.1@region_1_5259@tool_cenote_CDS_0006	cloud	direct	high	269	0.996	GCA_001810105.1_00976
GCA_001810105.1|KV799930.1@region_1_5259@tool_cenote	cenote	CDS	4362	5258	GCA_001810105.1	KV799930.1	GCA_001810105.1|KV799930.1	GCA_001810105.1_KV799930.1	GCA_001810105.1|KV799930.1	GCA_001810105_1_30	GCA_001810105_1_30@C0	4363	5259	GCA_001810105_1_30_7	GCA_001810105_1_30_7	-	23126	.	PFAM:PF05840.12	Rep-protein	MNRSASASAERALPCLNSNNCIETANSGEIKQLPSQYENRKADTLNEFSTSYKKSTTALEMNVKAFIEAFGLNKVGFLTLTFADDVTDPKEAQRRFHSLRTNFLKRHFPEYVCVYERTKKGRIHFHLIVNTRVDIRRGLNFREIAAGRYSSANPALRQLWALLRENVHKYGFGRTELLPVKTNSKGLARYVSKYISKHINSRLPEDKGYRLVRTSMDKKSVWKVANSNFAFVSKGSKEWRRKLKKWVEQVESYLNRVAEWKYRAALPRITQDNYNTVLAFVLSPKWAFKNREIIVNME*	rep_hall_hmm	common_virus	C0	5259.0	0	5259	GCA_001810105.1|KV799930.1@region_1_5259@tool_cenote_CDS_0007	shell	direct	high	896	0.999	GCA_001810105.1_00977
GCA_001810105.1|KV799969.1@region_1_2258@tool_cenote	cenote	CDS	1	80	GCA_001810105.1	KV799969.1	GCA_001810105.1|KV799969.1	GCA_001810105.1_KV799969.1	GCA_001810105.1|KV799969.1	GCA_001810105_1_49	GCA_001810105_1_49	1	81	GCA_001810105_1_49_1	GCA_001810105_1_49_1	-	2258	.	.	hypothetical protein	MNPIRIEPKPIKQPLIKSGGGRPERFV	.	hypothetical_protein	NaN	.	0	2258	GCA_001810105.1|KV799969.1@region_1_2258@tool_cenote_CDS_0001	cloud	ambiguous	low	3	0.037	GCA_001810105.1_01572
GCA_001810105.1|KV799969.1@region_1_2258@tool_cenote	cenote	CDS	77	1261	GCA_001810105.1	KV799969.1	GCA_001810105.1|KV799969.1	GCA_001810105.1_KV799969.1	GCA_001810105.1|KV799969.1	GCA_001810105_1_49	GCA_001810105_1_49	78	1262	GCA_001810105_1_49_2	GCA_001810105_1_49_2	-	2258	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MLYLITGVPGSGKTLKMISDLMTRQDLKNRPLYLDGIPEVDEKIIPNLPIPEGETMQTWHKWAPTGAILVIDECQRVFRPRPSGSKVPDFVAELETHRHKGIDIFLLTQHPRLIDSNVRALVGHHCHIGKTNLGVRRMLEWERCADPTSSRDVSSAVKSVYTLDKKAFGVYKSAEEHTKIKTKLSRVVYIFPAVLALLITAGWYIYSSWNNRIDTMKAEQEKPKIEAQASSPEAVGAVAVPTANGTNAEGQYTSQMAVPEPPKPHLSEDDYKPRIEDRPETAPIYDGVNKSITAMPWPSACVKSDNGCNCYTEQGSKIAEISKKTCLSYIKDGLPFNPYKAKKTETAEVKETEQEIERPQVLSMGGKSQQNLMYDGYVEKGNEIGAQNGAKTGS*	hallmark_hmm	common_virus	NaN	.	0	2258	GCA_001810105.1|KV799969.1@region_1_2258@tool_cenote_CDS_0002	cloud	direct	high	1184	0.999	GCA_001810105.1_01572
GCA_001810105.1|KV799969.1@region_1_2258@tool_cenote	cenote	CDS	1274	1552	GCA_001810105.1	KV799969.1	GCA_001810105.1|KV799969.1	GCA_001810105.1_KV799969.1	GCA_001810105.1|KV799969.1	GCA_001810105_1_49	GCA_001810105_1_49	1275	1553	GCA_001810105_1_49_3	GCA_001810105_1_49_3	-	2258	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MWGKLITSVLMTVAGKIITALGLSFVSYVGLNEIQGFLLSHVQTQIGGIPSDAMNLAYIAGIGVCLNWIFGTFAFVVSLKSLSKLSASISKK*	hallmark_hmm	common_virus	NaN	.	0	2258	GCA_001810105.1|KV799969.1@region_1_2258@tool_cenote_CDS_0003	cloud	direct	high	278	0.996	GCA_001810105.1_01573
GCA_001810105.1|KV799969.1@region_1_2258@tool_cenote	cenote	CDS	1555	2256	GCA_001810105.1	KV799969.1	GCA_001810105.1|KV799969.1	GCA_001810105.1_KV799969.1	GCA_001810105.1|KV799969.1	GCA_001810105_1_49	GCA_001810105_1_49	1556	2257	GCA_001810105_1_49_4	GCA_001810105_1_49_4	-	2258	.	PFAM:PF05616.12	attachment-protein	KPEYKENIKVPSGTVVTIGPVETPEGKKTYTVTFTNPSNGGSSEASVQTNNSPAPTGNTGGSPDGNPNGNPDGKPDGKPDGKPDGNPDGNPDGNPDGKPDDRPDDRPDDKPDDKPDGKDGKDGQDGRDGKDGKDAQDLCEKHPEASACKDLGDTDYKDLEIPEKAINLELKPLDIFSTNGTCPANPTFTLGVLGTFEIPYDYFCNIARLLRPILILGTIIMCGFFAFNAVKEL*	common_virus_hmm	common_virus	NaN	.	0	2258	GCA_001810105.1|KV799969.1@region_1_2258@tool_cenote_CDS_0004	cloud	ambiguous	low	339	0.483	GCA_001810105.1_01574
GCA_001810105.1|KV799983.1@region_1_1307@tool_cenote	cenote	CDS	2	193	GCA_001810105.1	KV799983.1	GCA_001810105.1|KV799983.1	GCA_001810105.1_KV799983.1	GCA_001810105.1|KV799983.1	GCA_001810105_1_55	GCA_001810105_1_55	3	194	GCA_001810105_1_55_1	GCA_001810105_1_55_1	+	1307	.	PFAM:PF10389.8	coat-protein-B	YGAKLAVVAAAPLAFATQALAEVPESVKTDLATAKTDALSVAAIVLGIIASIFAIQLIRRVLR*	hallmark_hmm	common_virus	NaN	.	0	1307	GCA_001810105.1|KV799983.1@region_1_1307@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_001810105.1|KV799983.1@region_1_1307@tool_cenote	cenote	CDS	261	539	GCA_001810105.1	KV799983.1	GCA_001810105.1|KV799983.1	GCA_001810105.1_KV799983.1	GCA_001810105.1|KV799983.1	GCA_001810105_1_55	GCA_001810105_1_55	262	540	GCA_001810105_1_55_2	GCA_001810105_1_55_2	+	1307	.	.	hypothetical protein	MGYQVGNNCYATRQDAENVYFSLVPPKIGDDGKLYQLNFTKFGWKYGEQILKAELPECNPIDSMKDGSYIGWSVVAIMVAVWGIRLIWQKLR*	.	hypothetical_protein	NaN	.	0	1307	GCA_001810105.1|KV799983.1@region_1_1307@tool_cenote_CDS_0002	cloud	direct	high	278	0.996	GCA_001810105.1_01812
GCA_001810105.1|KV799983.1@region_1_1307@tool_cenote	cenote	CDS	661	966	GCA_001810105.1	KV799983.1	GCA_001810105.1|KV799983.1	GCA_001810105.1_KV799983.1	GCA_001810105.1|KV799983.1	GCA_001810105_1_55	GCA_001810105_1_55	662	967	GCA_001810105_1_55_3	GCA_001810105_1_55_3	+	1307	.	.	hypothetical protein	MFIRIFNLVFVLLYLLHFLNIIFIPNEIRYFMMASYLVINLLGFIQNKFKSNNKLSDNDDFYLMNTNPKKPSPSDPDMVKFMADLNRSIEEKKEIEKVRNE*	.	hypothetical_protein	NaN	.	0	1307	GCA_001810105.1|KV799983.1@region_1_1307@tool_cenote_CDS_0003	cloud	direct	high	305	0.997	GCA_001810105.1_01813
GCA_001810105.1|KV799983.1@region_1_1307@tool_cenote	cenote	CDS	959	1306	GCA_001810105.1	KV799983.1	GCA_001810105.1|KV799983.1	GCA_001810105.1_KV799983.1	GCA_001810105.1|KV799983.1	GCA_001810105_1_55	GCA_001810105_1_55	960	1307	GCA_001810105_1_55_4	GCA_001810105_1_55_4	+	1307	.	PF05616.13	Neisseria meningitidis TspB protein	MNKLILFFFFFLGSSYLFAGDINIKGKSVTYNGQHTAHWDKQPWNRSVSDNLYRKFQTEAMKARYEGYLAKQTVNATVEATVARKAVLSGAFGLVKAGAKLGLKAETFAKSPKIPQ	hhsuite_tools	hypothetical_protein	NaN	.	0	1307	GCA_001810105.1|KV799983.1@region_1_1307@tool_cenote_CDS_0004	cloud	ambiguous	low	9	0.026	GCA_001810105.1_01813