core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	56773	56916	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	1	144	GCA_001856725_1_1_68	GCA_001856725_1_1_68	-	1829217	.	.	hypothetical protein	MESIKLSQKAEEEIVNAARMAALSNLTEKSQNLITLEDIAIYFGRHY*	.	hypothetical_protein	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0001	shell	direct	high	143	0.993	GCA_001856725.1_00069
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	56958	57077	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	186	305	GCA_001856725_1_1_69	GCA_001856725_1_1_69	-	1829217	.	.	hypothetical protein	MNKLIITLVCAFVVYMVHALNLNQDFDGKICHAEQTQQY*	.	hypothetical_protein	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0002	shell	direct	high	119	0.992	GCA_001856725.1_00070
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	57409	57783	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	637	1011	GCA_001856725_1_1_70	GCA_001856725_1_1_70	-	1829217	.	COG3561	Phage anti-repressor protein  [Mobilome: prophages, transposons]. 	MTNSNLIPVFNGLIQNQPVQLCNARELHAFLEIQTRYNDWIKNRINEYGFIQDEDYLVITERTNGRPRKEYHITLDMGKELGMVERNERGRQIRQYFARCERTLKALQPTTTARLARTRKEIQF*	mmseqs_cdd	common_virus	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0003	shell	direct	high	374	0.997	GCA_001856725.1_00071
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	58340	58507	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	1568	1735	GCA_001856725_1_1_71	GCA_001856725_1_1_71	-	1829217	.	.	hypothetical protein	MWIFQNTFASTETQRHVKPLRMIDEVCFEMADIKQTRLKNGRKKKKTAYLKMIKN*	.	hypothetical_protein	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0004	.	unmatched_CDS	none	0	0	.
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	58717	58926	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	1945	2154	GCA_001856725_1_1_72	GCA_001856725_1_1_72	-	1829217	.	.	hypothetical protein	MKKYLFHYYFQGTKWACDVYANNPEEAKEKIKAMSQAIYDGELKFEIHIPENPLSKLARLVARIIKKFT*	.	hypothetical_protein	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0005	shell	direct	high	209	0.995	GCA_001856725.1_00073
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	58940	59113	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	2168	2341	GCA_001856725_1_1_73	GCA_001856725_1_1_73	+	1829217	.	COG3422	Uncharacterized conserved protein YegP, UPF0339 family [Function unknown]. 	MKFETYVDARIEWRWRLKADNGKIIADSGEGYKNYTDCLHAIDLVKSTNQSTKVEMA*	mmseqs_cdd	nonviral_gene	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0006	shell	direct	high	173	0.994	GCA_001856725.1_00074
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	59605	60420	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	2833	3648	GCA_001856725_1_1_74	GCA_001856725_1_1_74	-	1829217	.	pfam11236	Protein of unknown function (DUF3037). This bacterial family of proteins has no known function.	MKQPILYSFVRYRPYFETGEFVNVGLLMCEPEKKKLTYQLVPKNNKRVNDFFYKSKMFETVRETINDELQYVVNQPFNGSAQDIATFFHHYIDVKEGIVQYSNAAVGMVDDPQDYFNKLYTQFIQNAGVKTESQEQVILKHYKTLFRQENDSVLAQYKQYMVNGDFAKFALPLALKNQQDKHILKAVKPLAFDQVESPSMIEHCDSWVAKINRAEQEGFIKRENILFALDTPNTAHKANILDTIKRTFDHFKLQHISWNEDKQIINFAKAI*	mmseqs_cdd	nonviral_gene	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0007	shell	direct	high	815	0.999	GCA_001856725.1_00075
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	60417	61190	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	3645	4418	GCA_001856725_1_1_75	GCA_001856725_1_1_75	-	1829217	.	PF09192.10	Actin-fragmin kinase, catalytic	MATVEEVLLDKRMDKIIFIRERMEMGITRPFICQTDKENWFIIKTLSMMPISQLLAEVIGSTLAHEIGLPCPSIDFVEITPKSTQYVSSEWRQDLPNGIAFASSFVVNAKIAKTVQVKNPAFLSEPEQKLLYMFDRWILNSDRTASQVGTGNINLLFDEQQQKILVIDHNLAFDERADFSEHIFSPQNREWRLDWVDKQTFTDKAIDTLKKFDHIYQSIPDDWFVGDEEFHKIEHQINRIKALLNRITQENYWDNIE*	hhsuite_tools	nonviral_gene	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0008	shell	direct	moderate	708	0.915	GCA_001856725.1_00076
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	61224	61880	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	4452	5108	GCA_001856725_1_1_76	GCA_001856725_1_1_76	-	1829217	.	pfam00717	Peptidase S24-like. 	MATLGERIKAYREQLKISQKELAERCNNIDTKSENARWGQPRIANYEKGNRTPDLEDISIISKALNILPEVLAFDSNISEIKESICRYPLLSPIQAGLWTDIRSLEGFDGYEMIPSTVIASENSFYLRIEGKSMLPRFNEGDLVLIDPDIVPTPGKFVVAINGDNEATFKQYKELGTKTPEGIPHFELVPLNPMFPTLSSLNQEIRIIGVARERVETL*	mmseqs_cdd	common_virus	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0009	shell	direct	high	656	0.998	GCA_001856725.1_00077
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	62238	62459	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	5466	5687	GCA_001856725_1_1_77	GCA_001856725_1_1_77	+	1829217	.	PFAM:PF10078.8	CII-like-regulator	MARNKLTRSARVLSDQVIEKYYKQKQYEVAEGMETTPSTLSRFISNEEFNQTFNFIAACQFGVFSRYASELML*	phrogs_hmm	hypothetical_protein	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0010	shell	direct	high	221	0.995	GCA_001856725.1_00078
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	62456	63091	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	5684	6319	GCA_001856725_1_1_78	GCA_001856725_1_1_78	+	1829217	.	PFAM:PF04492.12	Replication-protein-O	MSRFIPNSFQIPNSFVDEYLDSLSGKAIKCYLLIARKTTGWRKDSDRISTSQFMAQCGIKDRKTAYAAIEELESVNLVNIERKQGEINEFSLNFFIDENNDFKPAPKIGTLQKTILKTIYKITPLYPPKGNRLRLQMGKSTQRIFLCRIISIVRHGSLIAECVKSSGRKLKLKIRLSDVCETWKNSVGEVLIWLGRFWINLSPTPTLDYLL*	rep_hall_hmm	common_virus	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0011	shell	direct	high	635	0.998	GCA_001856725.1_00079
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	63213	63854	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	6441	7082	GCA_001856725_1_1_79	GCA_001856725_1_1_79	+	1829217	.	PFAM:PF06992.10	Replication-protein-P	MNAITPTQKSAVEKSDVSDNATKLIDRMFTRLKSLFPAWKQAFDSIETYNETKQVWLEELIKADVMTPLALKRGLDRAAGSESPFFPSVGQFIAWCSEDYHELGLPNEAELYQRYNTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKAIPKLLTKAAEKVRSNFPFEDIPKMIPEKLSFYDKAKADKARDSLMAMMKGKGALQ*	rep_hall_hmm	common_virus	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0012	shell	direct	high	641	0.998	GCA_001856725.1_00080
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	63851	64054	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	7079	7282	GCA_001856725_1_1_80	GCA_001856725_1_1_80	+	1829217	.	.	hypothetical protein	MTSYKCPKCGAELEDFYTPDYFISSSEWDDDRFRCNGHLIEPIPFPQVSKYSAVNRTKSCGYFGLED*	.	hypothetical_protein	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0013	shell	direct	high	203	0.995	GCA_001856725.1_00081
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	64111	64530	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	7339	7758	GCA_001856725_1_1_81	GCA_001856725_1_1_81	+	1829217	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPTDDKKPLVVKIQPITRNLEQNAKFHAMCQDVANQAEFMGRKLTMEQWKVLFISGHAIATNQKADVVPGLEGEFVNIRESSAQMSVSRMASLIEYVTSWGVQNGVRFNDRWGFK*	mmseqs_cdd	common_virus	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0014	shell	direct	high	419	0.998	GCA_001856725.1_00082
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	64619	65164	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	7847	8392	GCA_001856725_1_1_82	GCA_001856725_1_1_82	+	1829217	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKVCGKAFVKTFSSTQKVCSPECAIKLARDNAKKAQELAEKKKQRERKAKLKSRSEWLKEAQSVFNKFIRLRDKNEPCISCGRYHQGQYHAGHYRSVGACPELRFCELNIHKQCAPCNDHKSGNIIEYRINLVNKISADKVAWLERQDHELKKYTIEDCKAMIKHYKAKIKELEE*	common_virus_hmm	common_virus	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0015	shell	direct	high	545	0.998	GCA_001856725.1_00084
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	65165	65674	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	8393	8902	GCA_001856725_1_1_83	GCA_001856725_1_1_83	+	1829217	.	pfam06530	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	MRKFSELSELTIEQEEFVDRYMYQWGAWVRSGRLDKPQLNIIAKLMQSVIPTEPNEPICDDSTGMMISEVVGRFFLKNDRTLHYIVFSYYVNKGTINHIAVKLRENCGEIKMQPCAGKPDIRIPSLKTMIRNVEKELKLAKAIIHELLVIGFVILQTGRQNAKNIKITY*	mmseqs_cdd	common_virus	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0016	shell	direct	high	509	0.998	GCA_001856725.1_00085
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	65936	66292	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	9164	9520	GCA_001856725_1_1_84	GCA_001856725_1_1_84	+	1829217	.	TIGR01594	phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]	MPIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPAIRYVLIDAAMCASIAGVAVPICTHLFGHTEYSSFLGTMIGFVGTEKICEFLFKFINRRIEKDDNDDFRSDI*	mmseqs_cdd	nonviral_gene	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0017	shell	direct	high	356	0.997	GCA_001856725.1_00087
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	66261	66863	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	9489	10091	GCA_001856725_1_1_85	GCA_001856725_1_1_85	+	1829217	.	PDB:3WH1_A	Chitinase-	MTMMISEVTFNKIFPHAVKGVYQAISVQIEKAGCVNKMQQAMFLAQCGHESGGFTRFKENLNYSWLGLSKTFRKYFPDPLTAKKYERKPELIANRVYANRLGNGDEKSGDGWKYRGRGLIQITGKDNYAAFRKWLGRDIEPEDVAGNLDLSVKTAVWYWKCYELAELNSVEKVTRRINGGLNGIDERCKLYRALMVTDND*	common_virus_hmm	common_virus	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0018	shell	direct	high	602	0.998	GCA_001856725.1_00088
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	66856	67191	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	10084	10419	GCA_001856725_1_1_86	GCA_001856725_1_1_86	+	1829217	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MTKYIYIALGAVVVVLIGALRYQSSVIDELEITTKQQENTIQQQEDANKSLSLALQQERYAIIEQQERNNEIERIATENAESVKTIIKTQPCAHTRLPQSVLDRLHKENHD*	mmseqs_cdd	nonviral_gene	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0019	shell	direct	high	335	0.997	GCA_001856725.1_00089
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	67374	67580	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	10602	10808	GCA_001856725_1_1_87	GCA_001856725_1_1_87	-	1829217	.	COG1396	Transcriptional regulator, contains XRE-family HTH domain [Transcription]. 	MIELALLNDYSALRAWREHLGLTQAEVAGRLGISQAAYSQHENSQTLRKSTRIKIATALGINPAQLDF*	mmseqs_cdd	nonviral_gene	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0020	.	unmatched_CDS	none	0	0	.
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	67644	68033	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	10872	11261	GCA_001856725_1_1_88	GCA_001856725_1_1_88	+	1829217	.	PDB:5OE8_A	Large-Terminase	MLADQIEMLSLQAFFDVQKTQIIGQNGSRFTFAGLKTNITSIKSMTGIDVVWVEEGENVSKESWDILIPTIREDGSQIIVSFNPKNILDDTYQRFVIHPPERCKSVLVNWQDNPYFPKELMEDMEQMRE*	hallmark_hmm	common_virus	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0021	shell	direct	high	389	0.997	GCA_001856725.1_00090
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	68069	68452	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	11297	11680	GCA_001856725_1_1_89	GCA_001856725_1_1_89	+	1829217	.	PDB:4IDH_A	Large-Terminase	MEGFNAGGAVAYPEREYIKGKKNQDMFSNIKAQSWWALRDRFYKTYRAVKYGDVYPDDELISLSSKIKELEYLKAELSRPRVDYDNNGRVKVESKKDMKKRGIPSPNMADALVMCYAPTKPKSLLDL*	hallmark_hmm	common_virus	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0022	shell	direct	high	383	0.997	GCA_001856725.1_00091
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	68454	69785	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	11682	13013	GCA_001856725_1_1_90	GCA_001856725_1_1_90	+	1829217	.	PDB:8HDS_J	Portal-Protein	MNILDGIKSLALKLGSKQDQTYYARGLSLTDDLMQIEALWRDNWIANKVCIKRSEDMVRNWRDIFSNDLKSEQLDEFTKLERRLKLRETLTKALQWSSLYGAVGLLVVTDTINITSPLQPTERLKRLIILPKWKISPTGQRDDDVFSANFGRYSEYIITGGTQSVLVHHSRLLIINANDAPLSDNDIWGVSDLEKIIDVLKRFDSASANVGDLIFESKIDIFKIAGLSDKISAGLENDVAHVISAVQSIKSATNSLLLDTENEYDRKELSFGGLKDLLTEFRNAVAGAADIPVTILFGQSVSGLASGDEDIQNYHESIHRLQETRLRPVLEVLDTLLCNELFGGQPDDWWFEFLPLTVVKQEQQVNMLNTFATAANTLIQNGVVNEYQVANELRESGLFANISADDIEEMKNADELARNFEEPEGESTQVQASEDEQENGALI*	hallmark_hmm	common_virus	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0023	shell	direct	high	1331	0.999	GCA_001856725.1_00092
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	69814	70098	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	13042	13326	GCA_001856725_1_1_91	GCA_001856725_1_1_91	+	1829217	.	PFAM:PF06152.10	minor-capsid-protein	MTDDVEIALQQPQGSFFMDDAKGFQAISAKALMKVLENYEKSDRTSQAENIANGFVSRGDAQNHAEVSTNLKNQTGIDLSAYLRNSPNIAERVN*	hallmark_hmm	common_virus	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0024	shell	direct	high	284	0.996	GCA_001856725.1_00093
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	70095	70760	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	13323	13988	GCA_001856725_1_1_92	GCA_001856725_1_1_92	+	1829217	.	PFAM:PF04233.13	Minor-capsid-component	MNALTAGNIQLIKSIRAQYLDKVQNAVMQAMVRGSLNKDLAAQIKDLGKTTEKRAMFIARDQSSKLNAALTQARHEEVGIKKYMWSASLDERVRESHAEKDGQIFEYSNPPADTGHPGHDFNCRCVQIPVLDTEQEKQIIEQYEVDKVKEAISPSQYRYHVGDMEQNPVAMEFVKKYNLSTKEAVSIRDYTTNSYAKINSQLREDKAAPSILMMAKVIIMR*	hallmark_hmm	common_virus	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0025	cloud	direct	high	665	0.998	GCA_001856725.1_00094
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	71066	71374	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	14294	14602	GCA_001856725_1_1_93	GCA_001856725_1_1_93	+	1829217	.	.	hypothetical protein	MRKEYTDDDLFKKNTARRHSGEKIKLSEYLMLWMYELLTKPVEFGMRDAVLYRIHKKFTDEIPFDDTVKEMDRLIGEAEKAESQSKSYDEIVDMLWPRDNKE*	.	hypothetical_protein	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0026	cloud	direct	high	308	0.997	GCA_001856725.1_00095
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	71371	71727	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	14599	14955	GCA_001856725_1_1_94	GCA_001856725_1_1_94	+	1829217	.	pfam10711	Hypothetical protein (DUF2513). This family is found in bacteria. The function is not known.	MKRNWDLIRSILLKLESQSEARGSLLPDGFTGFDSETVSYHFKLLQSAGLIEAIDYSSLNEMSLIARSLTWQGHELLDKIRNDTVWNSLKTTIKSKSLDLSLDAIKQVAQTIISQMLA*	mmseqs_cdd	nonviral_gene	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0027	cloud	direct	high	356	0.997	GCA_001856725.1_00096
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	71788	72888	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	15016	16116	GCA_001856725_1_1_95	GCA_001856725_1_1_95	+	1829217	.	PFAM:PF09979.8	head-maturation-protease	MKFTDKTTQAATQRTITKDGFLVVPATISKVGVFDYLATELGLKEDGIKKVARTEKSLFSDETIKSFENATLTVGHPKDGVNAKNWKQLSVGVVRNVKRVGDELTAEAWIYDESAIKTVQENGVEQLSCGYDCDIKPSTVQDADFEMSPMIGNHVAIVAKGRCGGSVKLADEDKTIMGKTAKILDAFLGAFGIKLSDEQKKQIEDEEKSGSEEGKEPKGGQPTEPKEKQSKPENKKDDDVEKEELEKRLKAKDEEIQQLKDAQAKRDAEVKQAAVLADAKTAFKEVNFADNSTVREIQESAVVAQGIFTKDEAAKLSDEEISGAYQTAKAVVAKLADERKSLGSILLGDAEPKAAPKIDFNKTYNS*	phrogs_hmm	nonviral_gene	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0028	shell	direct	high	1100	0.999	GCA_001856725.1_00097
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	72901	73356	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	16129	16584	GCA_001856725_1_1_96	GCA_001856725_1_1_96	+	1829217	.	pfam11041	Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	MSYAYEQAPARAGEVGKHVGQFRVINVYQLRKFFGFRNSPNALGFSQKRLGGAQWYRKRDPLSDSVRLSDDDYRFLIKCRILKNYQIGTLPNLIEACLFIFGEGCHIVDNYDMTVSISVPSASTSDFKKFAINHLDILPRQAGVQYLFNLT*	mmseqs_cdd	common_virus	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0029	shell	direct	high	455	0.998	GCA_001856725.1_00098
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	73389	74381	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	16617	17609	GCA_001856725_1_1_97	GCA_001856725_1_1_97	+	1829217	.	pfam03406	Phage tail fibre repeat. This repeat is found in the tail fibers of phage. For example protein K. The repeats are about 40 residues long.	MKAFLHHLQNEAKLIISPIYCVVGEFALNEIARATLQQYGIVQLSSATNSDSETEAATSKAVKTAYDKAVEAKTTVDGKVGLNGNESINGEKSFENRIVAKRNIRISDSPHYVSRGDYLNIGANNGDCWFEYKSTNREIGTLRMHANGNLTYKRQKIYHAGAKPQFNTDIEGKPNTLAGYGIGNFKVEEFRGNLNELKTDGIYAITQASRSQNLPVSTSCHIQVIAGNDGAWCRQLAYVAYSTDMYERHQTSQAEDNWSTWVKLNDIEPVRELLSTKANISHTHNPRGQSNRLLSSFHESNNVEIGLCYQSSKLKYAMSIYLFTKLRLYF*	mmseqs_cdd	common_virus	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0030	shell	direct	moderate	953	0.96	GCA_001856725.1_00100
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	74681	74971	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	17909	18199	GCA_001856725_1_1_98	GCA_001856725_1_1_98	-	1829217	.	PFAM:PF10078.8	transcriptional-regulator	MEKLEFISLENLKHDLIAQDPTFEIRLVVHKQQQAIVQQLKADRLAKHLTQQDIANLTGIKTQNISRLERGMVMPNADTLIRYAQALGGTFQYVPA*	phrogs_hmm	hypothetical_protein	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0031	cloud	direct	high	290	0.997	GCA_001856725.1_00101
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	74982	75323	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	18210	18551	GCA_001856725_1_1_99	GCA_001856725_1_1_99	-	1829217	.	COG4679	Phage-related protein  [Mobilome: prophages, transposons]. 	MHNMPFSVHILTQVRKAISKMPQSLQEKIYFDLDDLETYGNELQEPKVRDLGNGLKELRTTAKEGIARSFFFFHIGKQIFVVHAIQKKTQKTPKQDLMLAKVRMKQLKDQLKP*	mmseqs_cdd	nonviral_gene	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0032	cloud	direct	moderate	333	0.974	GCA_001856725.1_00102
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	75396	75842	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	18624	19070	GCA_001856725_1_1_100	GCA_001856725_1_1_100	+	1829217	.	PFAM:PF14301.5	tail-protein	MTIYYKNGFFDDTDGGFVPESAVEISQETYLELLNGQSRGKQIIADKTGYPVLIDPQPSAAHVLNLDTLTWEISAEKQTALFAQQKEGLLNKLANKADQLKNGLLAGYPQTEIESFYRQEKEALAWQADNSTETPNAHTNRPKSWCAV*	phrogs_hmm	hypothetical_protein	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0033	cloud	direct	high	446	0.998	GCA_001856725.1_00103
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	75802	76008	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	19030	19236	GCA_001856725_1_1_101	GCA_001856725_1_1_101	+	1829217	.	.	hypothetical protein	MLTQIAQNRGVPFEILVEKVIEKSAQFAVVIGIIIGQRQAFEDRLLTFKTPEELTALEQEIEQWQFPT*	.	hypothetical_protein	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0034	shell	direct	high	206	0.995	GCA_001856725.1_00104
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	CDS	76239	77258	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	19467	20486	GCA_001856725_1_1_102	GCA_001856725_1_1_102	+	1829217	.	TIGR01036	dihydroorotate dehydrogenase, subfamily 2. This model describes enzyme protein dihydroorotate dehydrogenase exclusively for subfamily 2. It includes members from bacteria, yeast, plants etc. The subfamilies 1 and 2 share extensive homology, particularly toward the C-terminus. This subfamily has a longer N-terminal region. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]	MYQLFRHGIFQMDAEKAHNFTIQCLKLAGNPVFQPILKSLIHAPKGFPKTVMGVNFPNPIGLAAGADKNGDAINGFGTLGFGFIEVGTVTPIAQDGNAKPRQFRLIEAEGIINRNGFNNNGIDYLIENVKNARYKGVIGINIGKNKFTPLEQGKDDYIFCLNKAYNYADYITVNISSPNTPDLRQLQYGDYFDDLLRSIKDRQAILANQYNKYVPIAVKIAPDLTESELMQIADTLVRHKMDGVIATNTTISRDTVMGMKNAEQQGGLSGKPLQHKSTEIIKRLHQELKGQIPIIGSGGIDGLQNAQEKIEAGAELLQVYSGLIYHGPKLVKELVKNIK*	mmseqs_cdd	nonviral_gene	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_CDS_0035	persistent	direct	high	1019	0.999	GCA_001856725.1_00105
GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote	cenote	tRNA	65801	65871	GCA_001856725.1	CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725.1_CP017811.1	GCA_001856725.1|CP017811.1	GCA_001856725_1_1	GCA_001856725_1_1@C4	9029	9099	tRNA-Trp	tRNA-Trp	+	1829217	.	tRNAscan-SE score: 48.8	Trp	NA	tRNAscan-SE	.	C4	20486	56773	77259	GCA_001856725.1|CP017811.1@region_56774_77259@tool_cenote_tRNA_0001	.	.	.	.	.	.