core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	53905	54528	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	1	624	GCA_001949885_1_16_50	GCA_001949885_1_16_50	-	196923	.	PRK11630	threonylcarbamoyl-AMP synthase. 	MSQFFYIHPENPQARLINQAVEILRQGGVIVYPTDSGYALGCMIGDKHAMDRIVAIRKLPEGHNFTLVCSDLSELSTYATVSNSAYRLIKNNTPGRYTFILTATKELPRRLMTSKRKTIGLRVPDNQIALDLLNALGEPILSCSLMLPDNEHMTYSDPEEIRECLERQVDLIIHGGYLGQEPTTVVDLTEESPVILREGSGSTAPFI*	mmseqs_cdd	nonviral_gene	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0001	persistent	direct	high	623	0.998	GCA_001949885.1_01089
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	54824	55492	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	920	1588	GCA_001949885_1_16_51	GCA_001949885_1_16_51	-	196923	.	.	hypothetical protein	MADNSSGNLVETIKAIGEDIRLLSTTIIGVGRPDKPETTDSKIKGNEPNGSVYESTDGANVGAWQWQKRNGKWVVIDGDTGLVNAVTKNLKPGAYIKFRRQGNFVTCHMGGLSWGLFGYLGKTEKGYSPRQAGRVEVISQGGIPLGFRADDSCGFSLFDDDTNRAVAGIYVGGVGDSNFMRFTPYHADPKVKGNDAIPDIGPKNLRPPAMMWTTSDPWPDKV*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0002	cloud	direct	high	668	0.999	GCA_001949885.1_01090
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	55495	55860	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	1591	1956	GCA_001949885_1_16_52	GCA_001949885_1_16_52	-	196923	.	.	hypothetical protein	MTVNAKDNLVAFAKQVGADYKELRELLQRLGSLPTDVVTSSQLQAQLTQFENKLKGGELAENLDTLFEIAQKINSIVSDNAVAQSLTETLNNIKDRITTLETNNTLDLLTIYTNAKNGASV*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0003	cloud	direct	high	365	0.997	GCA_001949885.1_01091
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	55870	56007	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	1966	2103	GCA_001949885_1_16_53	GCA_001949885_1_16_53	-	196923	.	.	hypothetical protein	MKCEKFKVRLKTKQTKIKVELSKKEQTCDDLILPNLLLIYNLAKA*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0004	cloud	direct	high	137	0.993	GCA_001949885.1_01092
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	55997	56374	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	2093	2470	GCA_001949885_1_16_54	GCA_001949885_1_16_54	-	196923	.	.	hypothetical protein	MDEITQIDLDHYQGTDKDFIFEIVNDDEEETAYNGLSNASFEMWIKPSRGETIKLSTRTGEIAVKDNVIVVSIRNVHTANAKWEMADYDIFTLIDDKISAIVTGTFTLQHSITKEIPKRVDTNEM*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0005	cloud	direct	high	377	0.997	GCA_001949885.1_01093
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	56429	56722	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	2525	2818	GCA_001949885_1_16_55	GCA_001949885_1_16_55	-	196923	.	.	hypothetical protein	MTTFNKILNPMYSVIAAYSKQEDGSINAKYVLGTGTDNDGAVTDFTPIISEYKWIDPATAKSILGKPLTQDDIGKTTEQIDLDRIYAYLKEQGQIVI*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0006	cloud	direct	high	293	0.997	GCA_001949885.1_01094
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	56731	57516	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	2827	3612	GCA_001949885_1_16_56	GCA_001949885_1_16_56	-	196923	.	.	hypothetical protein	MLKISSEDAINIIDDTYKNYHLRKSGVLYDKDFETNGMTKDCYIPCVGFNSPIIVIHPRGHDYNSKVTYVPVSRNMTNKDYIKSEYRNTFGFQIYVWWNLHVNEGIEYYIFDDWQPETAKYGLTLWNEKGEIIYHSDWHRLKLLGVHQLGRAGPSISNDLKIDISKFSDLSNKVGILMPFVRRCMMGGLPGQYLPPAGGHNTFNNYELGEGFFFKDKNTIQYSWVCLHGGDGWWFSWNQIITPPSSFILTVDLDGMPLNYN*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0007	cloud	direct	high	785	0.999	GCA_001949885.1_01095
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	57509	57952	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	3605	4048	GCA_001949885_1_16_57	GCA_001949885_1_16_57	-	196923	.	.	hypothetical protein	MTNYGFEVCNADGVIRDKVTSKFARIIAKLHVPLIVAHDYAYQKAGSGSFVVNELLNIPKGYIPFYFISPAELNGCFYPNVKISGNLISWDFYIYDKELFPRNYDKKNGVSDLFGDNPVGFDATDVAFQRTAIFGGCYINVGICPDA*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0008	cloud	direct	high	443	0.998	GCA_001949885.1_01096
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	57952	61635	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	4048	7731	GCA_001949885_1_16_58	GCA_001949885_1_16_58	-	196923	.	PFAM:PF13550.5	tail-protein	MGKGGGGGGHTPVEAKESGRSKQLVKIVEVISEGEVYGLADGMKSIYFDKTPVQNKDGSYNFKNVQVEGRVGGQVQDLMAGFNTSEKEVGVGTLVKKNLPLTRTVTDSKVSRLRLTIGVQSLFKQEDNGDTNGTSVNFIITIGSRTYPVSISGKYSSQYLQHHTFDNLPSVPFIVKVERTTDDSTTQRLQNNTIWSSYTEIIDTEFAYPNTALMGVKFDSEYFSNIPTRTYDLLGLKVKVPSNYDTRTRKYTGMWDGTFKIDWTDNPAWVLYDVVTNKRYGLGGRLGEFGADKWALYQVAQYCDQLVPDGFGGQEPRFTCNAWLTEQRSAYQVINDICSIFRAMPVWNGQQLTVVMDRPADPVWTYTNANVDESGFSYTFSARKSRHNAIQVEYADKENSYEKAIEYVADDESIRKNGLNVKKITAFGCTSRGQAHRTALWLLQTEKLETKTVTFTVGAEGLMHIPGDIIKVADTHYAGTNIGGRVLAINGKIVTLDREITLSGNSYLSYINANAKHQNIKIISVNGAEVTLDQPPLGLELYGVWSLATQQVTSQLFKALSVKEEDKGKYTIMALQHEPQKEAIVDNGAKFEPAGTTVLTTPQISNIGVAVNSDGSVSVDSSVTGGNGIVKYDIRIYKGGVLYDVRLGQSSPNLNIDGLENGDYSVLIQVKTDNGQLLSEKTQTFTINKPPAPTGVRVTGGLGNITIEWDWINDATATEIFVSETDDIKTAKRLMKVTARMYTHEVGAKQVRYYWLRHTRGVNIGPFSQQSGLRGESSVDIDAELEVLNKKLSQNIVDEVIDTALPARNLDLIKTVNGLNTGKYQGHKQVYNTADGKLYTWNGSKYLENGIDVSGARIKTTQLVGTLQADQIGANTIGAGALQAGAVRAEHMAAGQITADKLAIGLGGNLLYNPIFDNDAYGWSENRGNGNLAGQTTSLTRRTSNKFNGLVTNGAVLIAVAKANSNVSSWWEIASQVVRVVPNQRYCLSAFVDAWSCTGELTVNELTNDGSSWVRTLAFSGRRGRNISGYSQSGSMEEDTGSIDPLTRTHAFFTAPSSGYVSVVCSMRDIQTTSTLKIANPMLEECTKYATQPSPWQNAGVTSIHGGSIITRTVTTELLAANSVTANEIATGAVTAKHVAANSIGANHVATRSLTADRLNVTSLSAISANLGDITGGSLNINNRFKVRNDGQVEMRASAGNVGMIITNEAISVYDERGRLRVKMGRL*	hallmark_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0009	cloud	direct	high	3683	1.0	GCA_001949885.1_01097
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	61646	62230	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	7742	8326	GCA_001949885_1_16_59	GCA_001949885_1_16_59	-	196923	.	PFAM:PF06805.11	tail-assembly-protein-I	MVNVRFYGSLKQFGSEFRLDCQTTAEIVQALTSQIPKLRQFIQQGLFTVRVGRDYFDNRYLEQGLSHKLKDDATVHFTPVLKGSKRGGLFGVIAGVAIIAGAIALGPLAGIISTNAAWIVGSVGASLLLGGVAQMLTKMPDMKIGAEKEKKQSTAFSNLSNMTAQGKPMPLAYGRIRVGSLIISQGVETMDTEI*	hallmark_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0010	cloud	direct	high	584	0.998	GCA_001949885.1_01098
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	62173	62907	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	8269	9003	GCA_001949885_1_16_60	GCA_001949885_1_16_60	-	196923	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MDGKLHNEIITYSKSKEPQESCGFVVLVDSGKVFIPCENASEDKENHFEISPEDYIAASEKGEVLALVHSHPQGEPKLSQADLQTQLYSQLDFWLVCDEQIHIFPKIPFLIGRDFKHGEMDCYTLFRDFYRLSGCNLPDFERDDYWWEDGFNLYLDNMAKHGFEQVKEPQIGDVILINIGADVPNHAAIYVGNQMVLHHAPKRLSKRDLYDGYWLKHTHSIWRYNAWSTLDFTVALNSLDLNLG*	mmseqs_cdd	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0011	shell	direct	high	734	0.999	GCA_001949885.1_01099
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	62910	63623	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	9006	9719	GCA_001949885_1_16_61	GCA_001949885_1_16_61	-	196923	.	PFAM:PF05100.11	minor-tail-protein-	MPQLISNQFKLDLAKLEQNALIELFEVDLRGLKDSDGMNGELYRFYAGTNEKSQPIVWQGKTFEPFAVKADGFEMSGNGPSNRPTLTLGNINGFITALCNRFDQCLGGIVRRRLVYMHYLDAVNFTNGNKKADPTQEALSYFVIEQLSSLNRDIAQFTLALPSETDNALIGARMITSTCSWLYRSVECGYTGRAVADEKDQPTADPKKDKCSGLLTGCKLRNNTHNYGGFVSVDKLG*	hallmark_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0012	shell	direct	high	713	0.999	GCA_001949885.1_01100
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	63684	64571	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	9780	10667	GCA_001949885_1_16_62	GCA_001949885_1_16_62	-	196923	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MANQISTQTISFNNQSLITVEQNGNHYVAMKPICENIGLAWEPQVLRIKRDEVLSQGMIVMIIPTNGGNQNMICLPIEYLNGWLFGIDINRCKPEIRDTLIKYKKECYQALHDYWFNGKAERKTTVDDRTGLRNAVNMLVSKKGLIYSDAYHLVHQRFNVESIEDLTLEQLPQAVEYVHRIVLEGELITEQKKDELFIREFTEHDLQQLVWAWFALLRGTELCQVLHPALKQIGSHYAASVYGVAYEYRSTLRQAHNVLTRITEQFECEQGNNWRVLKYLRAYDPKATGFQLDIL*	common_virus_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0013	cloud	direct	high	887	0.999	GCA_001949885.1_01101
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	64878	65411	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	10974	11507	GCA_001949885_1_16_63	GCA_001949885_1_16_63	-	196923	.	pfam14020	Protein of unknown function (DUF4236). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 69 and 402 amino acids in length.	MAIRFRKTKKILPGVKLNLSKSGVSVTTGVKGASINIGKNGVYRNLGIPGTGISKRDKLEFSSSKEEDYCYLDVLIDYVVDGQVVTLNVAITDYYPEKNAIWGYCEELEQEAVFYLNDIQRVFDISSGKDVGDIAEYFSQLNQSEDKEKSNNPPIGKILVVAFILFFIVYTFLFTKN*	mmseqs_cdd	nonviral_gene	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0014	cloud	direct	high	533	0.998	GCA_001949885.1_01103
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	65494	65838	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	11590	11934	GCA_001949885_1_16_64	GCA_001949885_1_16_64	-	196923	.	PFAM:PF05939.12	minor-tail-protein	MKELFDFKVQWGMQLDFKPKVDVIKFGDGYEQRRVESINSIPLSTTATIRYHKTRERNMIGSLDSFLMRHGGYKSFEWIPPGESKRILIVCSEWSKIDNGPYVEYSLQFRQVFN*	hallmark_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0015	cloud	direct	high	344	0.997	GCA_001949885.1_01104
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	65843	68218	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	11939	14314	GCA_001949885_1_16_65	GCA_001949885_1_16_65	-	196923	.	UniProtKB:I0K2M4_9BACT	tail-tape-measure-protein-	MDQISNLKIKLEAETAKFTEEINKAKKSLDGFGQMHGGINLTKIAIGGLATAALAATGAVVSFVSSLGDGIKIYEETERYMARTEAQLRATGAAVGFSSSQLDEFARSVAMNTLASTDGVRQAMSVMMTFKSVTGESFKEAIKLSQDLAETFGTDISSEARNLGRALESPADAISILKRKGIELTSEQQNLINSFVETGDKAKAQEVIFKALQERVGGTGESSANGTLSGALDTLGQATDELKEQFAETTGITNFFKGAVDSLSTAFINLTKAMKGVDTATHVKNLENEISILEKSKKSLEQQFESGAFDGSDEVLAAMRDQMERQQANLDKARAKLKAEQDKQKADADAAEANRKKVEKEEKEKAGKAQLEKIEDKLKSRQQKLTEQHEKDKKAIQNLVLSEVEIKKRGFETIDQLRNSELGKLEQNYNEQLAAIIKGENKKTSVKSKHGSGSKTSDVASLDMQYANEMQKLVLQHQQRIETINKMAISEKEAKERNFGSALELRKHYLTLEAQAYDQALEKQKAKEIKEDNDRANKVRSFFNDIRGSGNDPYVQSDITREDQLVKAQELYEQQLINVQQFEEAKALIEDQYRQRKEDLDRQALTTQLNIAASLFDGLAGLAESAGGKQSAAYRTLFAISKSFQIAESLINLHAAVMKAMNDPTAVTPAQKFANMAAVASQGAAVLNQLKSVTISGARASGGYVGGGKTYLVGEKGPELFTPGASGQITSNSNLNKALGESNSKTVVINQTNNFGDGEGDPALAAKIARLTKAQVYEVLRNETRSGGMMG*	hallmark_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0016	cloud	direct	high	2375	1.0	GCA_001949885.1_01105
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	68205	68465	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	14301	14561	GCA_001949885_1_16_66	GCA_001949885_1_16_66	-	196923	.	PFAM:PF06223.11	Minor-tail-protein-	MLREMSLAEYFSWYKYFGARPFTLEMLDYGYGIITSSVYNCAAAKQVVTARDFSIFNSDDPPKEMTDEEMMEVSAANSGVLRIGPD*	hallmark_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0017	cloud	direct	high	260	0.996	GCA_001949885.1_01106
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	68528	68917	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	14624	15013	GCA_001949885_1_16_67	GCA_001949885_1_16_67	-	196923	.	PFAM:PF06894.10	tail-assembly-chaperone	MLKQIEFEVSGQVLQLSALSALDYLEYIEYMNSLEKPEPIKTEDTEKEINAKLNQMTRNNLLAHARLIAFSLSHSQTDKTIEELQKEVLTTLTNSDFYLVLEAVQNVCNFPKSEGREETESTDGEIKNA*	hallmark_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0018	cloud	direct	high	389	0.997	GCA_001949885.1_01107
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	68920	69423	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	15016	15519	GCA_001949885_1_16_68	GCA_001949885_1_16_68	-	196923	.	PFAM:PF16463.4	tail-tube-protein	MAKKDTTPMKGAGIQFFRLKDEKETTAIQNGTISAAEIKKADNWERIAKIKDFSPGEITAESYEDNYLDDPNAEWKSTSQGAKSSGETSITLAWLPGDTAQQAIVMDFDSGKKKFYLILYPNGTRDVYFAWVSSLGKAVPQNETMTRTIKLTNVGKALLAETNQAGD*	hallmark_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0019	cloud	direct	high	503	0.998	GCA_001949885.1_01108
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	69423	69821	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	15519	15917	GCA_001949885_1_16_69	GCA_001949885_1_16_69	-	196923	.	PFAM:PF06141.10	Minor-tail-protein	MKIHSEIRQAVINALKPHLPKVKEFSNGKPSFTDIETQSPTVAVFISNVTPTGYLDGTLQATLHVAAFMRSASREDDLDKLAQEIYESGIVEESLSSLTETTAFSSFDYEQDEQMATWIAADIQYNITYEVK*	hallmark_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0020	cloud	direct	high	398	0.997	GCA_001949885.1_01109
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	69818	70363	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	15914	16459	GCA_001949885_1_16_70	GCA_001949885_1_16_70	-	196923	.	PFAM:PF06763.10	minor-tail-protein	MAINDDIEKAKKALTDIDKKAVPQAMARTINNVAAKVMVRAVIDTSKKVDVPKRFIKGRAKLERAKPRRLSAFIKVNRGNLPVIRLVKGDGRFIRRGENKGQLKVGNRFYQRSFIQELKNGRTQVMQRQGKDRYPIDVVKIPLKIPLTEAFHAEVKRAYEKEMPMELRNQLIRQIQIVVKK*	hallmark_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0021	cloud	direct	high	545	0.998	GCA_001949885.1_01110
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	70363	70668	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	16459	16764	GCA_001949885_1_16_71	GCA_001949885_1_16_71	-	196923	.	PDB:2KX4_A	head-closure-knob	MSRSTLSPFDDALAQADNVISDVMMSVYVINGKKYKAVLDESPKEVEPINGVYRTLTLFKSSGYKPKKNDRVTINNIDYLVSGFSFNSGTIILQLEEDESY*	hallmark_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0022	cloud	direct	high	305	0.997	GCA_001949885.1_01111
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	70649	70972	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	16745	17068	GCA_001949885_1_16_72	GCA_001949885_1_16_72	-	196923	.	COG5471	Predicted phage recombinase, RecA/RadA family [Mobilome: prophages, transposons]. 	MAKNYMQDGNTVRFTATAAVKSGDVVMLENLAAISVSDVAQNETGIGLTTGVFTVKAKAEDDIKQGAIVYWSATDGATITAGSNKRLGIAWNASGASMGTVDVKINA*	mmseqs_cdd	nonviral_gene	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0023	shell	direct	high	323	0.997	GCA_001949885.1_01112
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	71043	73049	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	17139	19145	GCA_001949885_1_16_73	GCA_001949885_1_16_73	-	196923	.	PDB:6WKK_D	Major-Capsid-Protein	MAANVTKTNNQSWYSIKAKANDTAEISIYDEIGFWGVSAASFAQDLKDCGNNIKQINLHIHSPGGDVFDGIAIYNLLKNHPANVTVYIDGLAASMASVIAMAGNEVIMPENAMMMIHKPWGIQGGDAEDMRKYADLLDKVENTLIPAYANKTGKTPEELAEMLSAETWLNGKECVEQGFADKLAEPLVAMASIKSRKLEDFENMPKAMKDMLFKPQGNAGASAPQATPTPAQPAPTVPVNQAPTAPVDNTAQVQAELNKRNADIKAVFAPFGTTHNDLLVECLGDLSITPDQAKDKLLAKLGAGTTPSAAPTAYAGNGNIVGDSVKQSLLARAGIDKDKADAKDNAYNAMTLRELARASLVDRGISVAGQNAMSMVGLAFTHSSSDFGQILIDVAHKSLLKGWETAAENFDQFTSRGTLTDFRAAKRVGLGDFGYLPQVGEGEEYTYGTIGDEGASVALATYGQLFSITRQAIINDDMHLLTKIPEKMGQAARATIAKLVFALLTGNAIAQDGKKLFDGSHKNSFDNAALDVANIDKAIQMMNGFVNTRGEPLAIEPDFMLLPTSLYTRAKQVLGSASVEGADINSGIINPIRDIVPTVKSARLQVADPKSWYLINKEAIEVSYLDGIDTPYMEQQQGFTVDGVSTKVRIDAGVNVIDYRGIVKVTNK*	hallmark_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0024	shell	direct	high	2006	1.0	GCA_001949885.1_01113
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	73021	74544	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	19117	20640	GCA_001949885_1_16_74	GCA_001949885_1_16_74	-	196923	.	CDD:COG5511	Major-Capsid-protein	MGIVDKAIAAISPKWGAQRAKNRYVMNAYEAAMPNRTHKAKRESQGANVSTKQSAVSLREQARALDQNHDIVIGILDKMEERVIGSRGIHIEPQPLKLTGDVDEELAEQIRKKWAEWSVRPEVTGQFTRPELERMLLRTWLRDGEVFIQLVRGSVAGLNHSTKIAFSLEALEPDFVPMNTLDTANVIQGIEINAWRRPVSYRVYMDNPQENNRTYGRLKSVPAENMLHLAFKKRLHQLRGVSMLHGVIIRLADLKDYEESERVAARIAAAFTMYIKKGDSSLYGDNDEYSADSPERDFEIAPGAIIDDLKPGEDIGLINSNRPNVNLETFRNGQLRATAAGTRSSYSSIARDYNGTYSSQRQELVESFEGYSVLQDTFVAHISRPIYREWLKMAIVSGEIEVPVDIDPASLYNAVYSGPVMPWIDPTKEAQAWKERIKGGLATESQAVRASGSNPAEVKRRRRVEVEENRKFGLKFDTDLTNTGTTNEKTKDDSGANSDGSERDKDE*	hallmark_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0025	shell	direct	high	1523	0.999	GCA_001949885.1_01114
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	74548	74793	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	20644	20889	GCA_001949885_1_16_75	GCA_001949885_1_16_75	-	196923	.	.	hypothetical protein	MRFFIGAKMAIYERDELEEKIRTLDEKIENAQSQVSFNGRSVSYQVSEWTKQRDRYQQMLNELLAETRQRVKRHRIKYARF*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0026	.	unmatched_CDS	none	0	0	.
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	74808	75326	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	20904	21422	GCA_001949885_1_16_76	GCA_001949885_1_16_76	-	196923	.	COG3646	Phage regulatory protein Rha [Mobilome: prophages, transposons]. 	MQLANPENFKQFVQNKDAKTITTSETVAKVFGKYHKHVIRDIREILEAGDDEFNRTNFGLVEYIDKKGEKRPMFEMTKDGFMLLVMGYKTKKAMAIKIAYIKAFNFMQEQLLSGNMTLLEQYYQALGEHKAEKQLASVCGKALNEWKGKKPLLEATLKIFEDKLQIELPLLN*	mmseqs_cdd	nonviral_gene	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0027	cloud	direct	high	518	0.998	GCA_001949885.1_01115
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	75450	77570	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	21546	23666	GCA_001949885_1_16_77	GCA_001949885_1_16_77	-	196923	.	CDD:COG5525	Large-Terminase	MFASAKDIRRDIANLLKPPRRMKVSEAVAEYMRVPVGGGNSVKWDKDTAAYMLDPMDCLNSREYDAVIFVGPARTGKTIGLIDGWITYAIICDPSDFLLVQLTQEKASEHSRKRLDRTFRCSPEIAKRLSPRKNDNNVHDKYFRAGNLLKIGWPSINVLSSSDYKYVALTDYDRWPDDVDGEGDGFSLASKRTTTFMSAGMTLVESSPGKDIVDIKHHSKTTHEAPPTTGILSLYNRGDRRRFYWQCPHCQEWFEPSMANMVGYRDDTDYVKASENARLQCPHCQSLVEPDKKRALNIGGKWLKEGQTIDKDGVIHGEGRNSRIASFWLEGPAAAYQTWAQLTYKLLTAEHEFEMTGSEETLKAVTNTDWGLPYLPRSALEQRRSDELMERREETEKRTVPYGCRFLLAAVDVQGGRNRRFVVQIVGYGENSERWLIDRYNIKSSMRSNSGGESLPIDPSAYPEDWDLLISDVLNKQYRIEGLDGGFMPILAMAVDSGGEDGVTDNAYKFWRRCKRDGISKRVYLVKGDSTKRQKLISRTYPDNTSRSDRHAKARGDVPLYLLQTDQLKDRISNALSRETIGANYIHFPSWLGEWFFDELTYEERGQDGKWRKPGKGNNEAFDLFCYAHAIAILRGYERIKWGDEDNVPYWAKLPSVNPNVIRRESSAPEEETESAVETEQVKPQPKAKTKSNWLNGGRSKKSGWL*	hallmark_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0028	shell	direct	high	2120	1.0	GCA_001949885.1_01116
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	77573	78046	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	23669	24142	GCA_001949885_1_16_78	GCA_001949885_1_16_78	-	196923	.	pfam07278	Protein of unknown function (DUF1441). This family consists of several hypothetical Enterobacterial proteins of around 160 residues in length. The function of this family is unknown. However, it appears to be distantly related to other HTH families so may act as a transcriptional regulator.	MDNLYDLKLNINQIAELVGMHRQTVSQRLAGLTPAIGSNSKLKLYALSDLIKIGLAEKMTADVDSLSPVERRAFWQAENERLKYERDTGELVPSFEVAQEMGFLAKAVVQSLDTLPDILERDCALTPTQLTRVIQVIDDVKSQMSLHIQDGDNKSEE*	mmseqs_cdd	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0029	shell	direct	high	473	0.998	GCA_001949885.1_01117
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	78316	78540	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	24412	24636	GCA_001949885_1_16_79	GCA_001949885_1_16_79	-	196923	.	.	hypothetical protein	MTMLLSGCTNKVTTKAEYIYPPQAFLTPCIKTPFTGNTYGEAVEHLIIVQGERDMCASQITNINKWINQTKTAN*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0030	cloud	ambiguous	low	28	0.124	GCA_001949885.1_01118
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	78512	78844	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	24608	24940	GCA_001949885_1_16_80	GCA_001949885_1_16_80	-	196923	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MFSRFKTALKLTALCLILGLCGWIWHQSNSIDKLRAENQVQAQTIKSQEQVNQSLKDTIETERQAVEQQRVINDEIKQATQDKVQVVRKIIKSQPCYNTRIYDDAIERLH*	mmseqs_cdd	nonviral_gene	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0031	cloud	direct	high	332	0.997	GCA_001949885.1_01118
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	78817	79371	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	24913	25467	GCA_001949885_1_16_81	GCA_001949885_1_16_81	-	196923	.	CDD:cd16901	P1-lysozyme	MKLTRTRTTLGATGFVCAVSSIITLMYAQFGEELILSPKGAEIIGNAEGCRRDPYKCPSDVLTVGIGSTAYSGQPVDPKHRYTDLEIAERWKNDIQVAEKCVLNYGNGRALPQSVFDSAVSITFNAGCGAVRNSTLFKQLRAGNYHQACYEYPKWVYAGGKILPGLVSRREKEKALCLADLKQP*	common_virus_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0032	shell	direct	high	554	0.998	GCA_001949885.1_01119
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	79352	79603	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	25448	25699	GCA_001949885_1_16_82	GCA_001949885_1_16_82	-	196923	.	PFAM:PF16082.4	holin	MFKDPGNQTYVWSGFSGVLAWLGDQNNLMLLSLAIGILTALVNVYSKCAEGRMMRRENERKEEIHKVRMERLKRGLPDEVDKD*	phrogs_hmm	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0033	cloud	direct	high	251	0.996	GCA_001949885.1_01120
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	79943	80611	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	26039	26707	GCA_001949885_1_16_83	GCA_001949885_1_16_83	-	196923	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MKNQVQFSAFTFKSNSVRVITDKNQEPWFCANDVCDILGYSNPRDAISKHCKVGGVAKRDTPTKSAVQEMTFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLHPQQLALPEPEKKFIFEFTEYELQQLAWLWFAFKRGVGTFQHIERAFNVLGSNMSGQIYGQAYEYLSVLRSTNQILNRITSDFNIDPMTNWRVLKHLRGFNPKAVKIDF*	common_virus_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0034	cloud	direct	high	668	0.999	GCA_001949885.1_01122
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	80902	82086	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	26998	28182	GCA_001949885_1_16_84	GCA_001949885_1_16_84	-	196923	.	PFAM:PF13588.5	endonuclease	MNAKFILEEIKMSEQIFKERVLAHAQHVIRAGQHCTTEETTKQALILPFLDILGFSPYDPIKVKAEYAADFVGAKNGERVDYALFCHNVPVMFIEAKSYNEDLTNHSPQLARYFNATPEVTVAAITNGREWRFFTDLKDKNIMDSSPFLRVNFEILDESKIPQLSQFCHDNFQPEALRTLAEESIYLSAFTKTISSSLKEIDSEFVRYVAGRSNIGRQLNQRFIEAITPIVKQAVEKSVSDMVVSGLSKKVVEPETINEPESIVVDETAPIVDPENSKIITTYTERQVLEYVSMILGEEADLVAKDTESYFSVLYQGKSNRWILRYFDNKQRPSIIIPIELTQENQKEIARSGLEMSGNQIIIDCPENILRLSGIIRDCFEYCINDENFRKKSQ*	phrogs_hmm	nonviral_gene	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0035	cloud	direct	moderate	1152	0.972	GCA_001949885.1_01124
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	82229	82597	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	28325	28693	GCA_001949885_1_16_85	GCA_001949885_1_16_85	-	196923	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MSYSVERILEKWGNCWGRDRIGTEYPSTTISIPVLPTARKAYIKFLTDDECLKIEKQIMNLHDDDLLQYQILMALYIQQASEREICNALNISPAKMYRERAQGIRFLKGAFTGAKIKFMFLG*	phrogs_hmm	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0036	shell	direct	high	368	0.997	GCA_001949885.1_01125
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	82594	83157	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	28690	29253	GCA_001949885_1_16_86	GCA_001949885_1_16_86	-	196923	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKVCGKAFIKTFSSTQKVCSPECAIKLAREQSRKRQKKAEKQEQIERKKRLLDGDRGHWLKALQKEVNKFIRLRDKGQPCIACGTVWKPSFQASHFIPQGRSSFLRFDERNIHSGCIRCNLFVGGGNIHGYRPRLVEKIGEQEVQWLEENQHRIKKWEISELKELIKVYRAKIKELDGSQE*	common_virus_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0037	cloud	direct	high	563	0.998	GCA_001949885.1_01126
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	83247	83435	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	29343	29531	GCA_001949885_1_16_87	GCA_001949885_1_16_87	-	196923	.	.	hypothetical protein	MDWIIYFLLMLVVMSLPLLALLLGLISPFIARFFNWILVVSTLAYFILIAVGIGYGMMSLVS*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0038	cloud	direct	high	188	0.995	GCA_001949885.1_01127
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	83445	83954	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	29541	30050	GCA_001949885_1_16_88	GCA_001949885_1_16_88	-	196923	.	pfam07105	Protein of unknown function (DUF1367). This family consists of several highly conserved, hypothetical phage proteins of around 200 residues in length. The function of this family is unknown. Some proteins are annotated as IrsA (intracellular response to stress).	MACSVDDIKKAHGKRTEGRLKIQVIKLQGGVLAPLDELESEELKSLKNGEQYEIEIIRTRNPAFHRKVFAFFKFCFNHWVADKTEWEHFDERKQFDTFRKHLTVLAGFYESTYNIKGDLRIEAQSLSYGNMEQAEFESCYKALISAAIKHIFNDSTDENTLNQLYEFFW*	mmseqs_cdd	nonviral_gene	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0039	cloud	direct	high	509	0.998	GCA_001949885.1_01128
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	83959	84537	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	30055	30633	GCA_001949885_1_16_89	GCA_001949885_1_16_89	-	196923	.	PFAM:PF05869.10	Adenine-specific-DNA-methyltransferase	MTEQKFDKDTWQTPKYCRNYLEIRFGWFDVDGAADSKNKLFPKWIGIGPAWGDNDNIALDFLGDDVIGKINELAECNGYPTHIYVNPPYSDVTPFLVRAKELRDAGHLVVMLLNNDKSTQWYQNHIHNVANEVIDITGGRIAFIHPVTGKEIKGNSKGQMVVVFDPTMEDFVTRSVSLDFIKKVGGYIHVEK*	common_virus_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0040	cloud	direct	high	578	0.998	GCA_001949885.1_01129
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	84538	85152	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	30634	31248	GCA_001949885_1_16_90	GCA_001949885_1_16_90	-	196923	.	PFAM:PF06992.10	Replication-protein-P	MNQLTTQQTNFKEVPDQARQMIDRIFANLTASCPILLSVSGEQLEILKQQWILGFAENGIKTFEQVKRGMAAARAKANGYLPSVGEFISWCNSYNNHELGLPTQDELEARLKKYFGYAKEPHNFKFRSRAEYYLLKTIYDGYGKKKWEDCQKAMPKILAEVVDKARTGFEFPQIPELLEQKPKVIPPEVSKNGVAKIKEIMGIA*	rep_hall_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0041	cloud	direct	high	614	0.998	GCA_001949885.1_01130
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	85152	85973	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	31248	32069	GCA_001949885_1_16_91	GCA_001949885_1_16_91	-	196923	.	PFAM:PF04492.12	Replication-protein-O	MSKFIPNAFQIPNSVIDELLAKLTCAELKCYLFVVRKTKGWNKESDSISVSQFMEVTGLSNRSVITACESLVEMGLLERSGGERKLNTYSVKAFDISQTGEKSSSDKTGENFSQTGEKSSSDLVKKVHTQNNNKNTIQNNNTSSSGKISQPRAKAKKNVFSDDDLMAAEWILGLIRKLNPSFKEPIIESWANDIRLMRERDNRTHKDICELFKWANQDKFWSVNILSPSKLRDKWDQLSMKRDAAKTMPTRKETFQERNSTNWGTAEKMAEVF*	rep_hall_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0042	cloud	direct	high	821	0.999	GCA_001949885.1_01131
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	85973	86701	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	32069	32797	GCA_001949885_1_16_92	GCA_001949885_1_16_92	-	196923	.	pfam03374	Phage antirepressor protein KilAC domain. This domain was called the KilAC domain by Iyer and colleagues.	MNQLIVIDNTKIKQDSQGRYCLNDLHRASGGNPIHAPSQFLRLKGTKDFVSVLDSHNANMHSALEIINGGTSQGCYAAEKLVYKYAAWINPEFEVKVYDTFDKVVKGKLQPNQTALIPQSFSEALMLAAQLQAEKEQNAPKVEAFDRLATATEGAMNLTNAAKHLQMQPRSFNQFLFANGWIYKRTVGSAWIAYQDKLQRGYLEHKAHPVTQPDGTEKIYPQVLVTAKGLAKLSTMLNKAAA*	mmseqs_cdd	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0043	cloud	direct	high	728	0.999	GCA_001949885.1_01132
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	86749	87192	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	32845	33288	GCA_001949885_1_16_93	GCA_001949885_1_16_93	-	196923	.	PFAM:PF06892.10	CII-like-transcriptional-activator	MAMKQTIIEMIEKVPGGKSAAAGFLGFTESELNNRLYQTKGQRFKNEELIAVQLEYGCTDFIDELCRNAGGRFVKDTDADNLDAVEMANIQLHELSARGMLFGVLEDALKDGEISQGEEEIILKLLNKHLAATQHSIECVIALNKRK*	phrogs_hmm	nonviral_gene	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0044	shell	direct	high	443	0.998	GCA_001949885.1_01133
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	87247	87486	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	33343	33582	GCA_001949885_1_16_94	GCA_001949885_1_16_94	-	196923	.	PFAM:PF10078.8	transcriptional-repressor	MKSLKHIIDSLGVAKVADLCGISVRAVYKWRASNSLPRTEYTGETRYSEILSQALENVISAEEIRNFSNPIKSGSAIIA*	phrogs_hmm	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0045	cloud	direct	high	239	0.996	GCA_001949885.1_01134
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	87587	88252	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	33683	34348	GCA_001949885_1_16_95	GCA_001949885_1_16_95	+	196923	.	PDB:2FJR_A	Repressor-protein-CI	MITEEKIKQDFAARLDIACKRKNLPEKGRGKIIADILKITPKAVSKWFNAETLPTQSNIYVLADFLGVTKEWLSYGDKNASIEQIEKQRAYPLLSPVQAGLWTDIGSLEGFDGYEMIPSTVIASENSFYLRIEGKSMLPRFNEGDLVLIDPDIVPTPGKFVAAINGDNEATFKQYKELGTRTPEGIPHFELVPLNPMFPTLSSLNQEIRIIGVARERVETL*	common_virus_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0046	cloud	direct	high	665	0.998	GCA_001949885.1_01135
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	88286	89059	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	34382	35155	GCA_001949885_1_16_96	GCA_001949885_1_16_96	+	196923	.	PF09192.10	Actin-fragmin kinase, catalytic	MATVEEVLLDKIMDKIIFIRERMEMGITRPFICQTDKENWFIIKTLSMMPISQLLAEVIGSTLAHEIGLPCPSIDFVEITPESTQYVSPEWRQDLPNGIAFASSFVVNAKIAKTVQVKNPAFLSEPEQKLLYMFDRWILNSDRTASQVGTGNINLLFDEQQQKILVIDHNLAFDERADFSEHIFSPQNREWRLDWVDKQTFTDKAIDTLKKFDHIYHSIPDDWFVGDEEFHKIEHQINRIKALLNRITQENYWDNIE*	hhsuite_tools	nonviral_gene	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0047	cloud	direct	moderate	707	0.913	GCA_001949885.1_01136
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	89056	89871	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	35152	35967	GCA_001949885_1_16_97	GCA_001949885_1_16_97	+	196923	.	pfam11236	Protein of unknown function (DUF3037). This bacterial family of proteins has no known function.	MKQPILYSFVRYRPYFETGEFVNVGLLMCEPQKKKLTYQLVPKNNKRVNDFFYKSKMFETVRETINDELQYIVNQPFNGSAQEMATFFHHYIDVKEGIVQYSNAAVGMVDDPQDYFNKLYTQFIQNAGVKTESQEQVILKHYKTLFRQENDSVLAQYKQYMVNGDFAKFALPLALKNQQDKHILKAVKPLAFDQVESPSMIEHCDSWVAKINRAEQEGFIKRENILFALDTPNTAHKANILDTIKRTFDHFKLQHISWNEDKQIINFAKAI*	mmseqs_cdd	nonviral_gene	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0048	shell	direct	high	815	0.999	GCA_001949885.1_01137
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	89969	90136	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	36065	36232	GCA_001949885_1_16_98	GCA_001949885_1_16_98	-	196923	.	.	hypothetical protein	MKKEFKKWLISLNCEGINSLGIDEIVSRVDEELRIVRANEQERIVLEELIAEFKC*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0049	shell	direct	high	167	0.994	GCA_001949885.1_01138
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	90447	90677	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	36543	36773	GCA_001949885_1_16_99	GCA_001949885_1_16_99	+	196923	.	.	hypothetical protein	MITLQDVKKQINSTAPIECGLKVGDRVIYKNDFGIKFGPFEIIGFEKKEDISGGRFVYLNSDSYWFPVKAEQLTKQ*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0050	cloud	direct	high	230	0.996	GCA_001949885.1_01139
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	91387	91872	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	37483	37968	GCA_001949885_1_16_100	GCA_001949885_1_16_100	-	196923	.	.	hypothetical protein	MTNDSEFSLFYAHNLTKIYGTFNSRIANIITFIQILFGSSLALDVTKTFPLLSDYHWTFWTGAIVTATAILSFVYKFDEKALLSNQLYRHYGSIISKYRHNPALDIDHEMLNLPIDEIKIVGAFEDIAYKRTAIQLSRDDHTKLDYYQSFIAYFSGDSFND*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0051	cloud	direct	high	485	0.998	GCA_001949885.1_01140
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	92356	93015	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	38452	39111	GCA_001949885_1_16_101	GCA_001949885_1_16_101	+	196923	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MTNSNLIPVFNGLIQNQPVQLCNARELHAYLEIGKEYANWIKDRINEYGFIQDEDYFIITERTNGRPRKEYHITLDMGKELGMVERNERGRQIRQYFIRCERILKALQQPQQLALPEPQKFTFEFTEHDLQQLVWAWFALLRGTELCQVLHPALKQIGSHYAASVYDIAYEYRSTLRQAHNVLNRITEQFECEQGNNWRVLKYLRAYNPKATGFQLDIL*	common_virus_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0052	cloud	direct	high	659	0.998	GCA_001949885.1_01142
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	93111	93410	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	39207	39506	GCA_001949885_1_16_102	GCA_001949885_1_16_102	+	196923	.	.	hypothetical protein	MQKFTDAFAETIPFLCKTAIAFALAFLIGGIAYCFANEPTDWHDNTLSQQIQQEARAKAKAQWREENGIYQANLTPQVNADMYRYVEQKQAEINRTWSK*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0053	cloud	direct	high	299	0.997	GCA_001949885.1_01143
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	93573	93905	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	39669	40001	GCA_001949885_1_16_103	GCA_001949885_1_16_103	+	196923	.	.	hypothetical protein	MENTKIPPYQKDAETNQFPAASKESAVEKEVVIAKPQGLTRTQPKINVKTKNKSTTPRRKPFTPYGLNGYFVDKQGNIRLHLDRKAHAHTIVLNPEMFSMLANMVQATQE*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0054	cloud	direct	high	332	0.997	GCA_001949885.1_01145
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	93910	94074	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	40006	40170	GCA_001949885_1_16_104	GCA_001949885_1_16_104	+	196923	.	.	hypothetical protein	MKRTTLSLWQCDNPYDYYAQFETESIEQDEPEEDWREPEDADCEYWQSNCYGRG*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0055	shell	direct	high	164	0.994	GCA_001949885.1_01146
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	94077	94220	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	40173	40316	GCA_001949885_1_16_105	GCA_001949885_1_16_105	+	196923	.	.	hypothetical protein	MEETPRERLESKAELLNAIRNWLWQERITPEELQAEIEYIQQNPLPF*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0056	shell	direct	high	143	0.993	GCA_001949885.1_01147
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	94230	94730	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	40326	40826	GCA_001949885_1_16_106	GCA_001949885_1_16_106	+	196923	.	PFAM:PF05565.10	resistance-protein	MKLYEITEQLENIKELLENPEFADNADIAKALDAVQQDFDKKAENVVYVIKNTEGDIEVIDAEIKRLQAMKKQRQNGIEQIKNYLKHNMEATGTAKINCPLFTISYRESKQSAVQLDEDLFLANNCDETLVNVKITANKTEIKARLKAGEEIPGAKLVDSQVLTIR*	common_virus_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0057	shell	direct	high	500	0.998	GCA_001949885.1_01148
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	94741	95394	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	40837	41490	GCA_001949885_1_16_107	GCA_001949885_1_16_107	+	196923	.	pfam04404	ERF superfamily. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to ERF.	MELQSANLSELMPELIQAISQLGNLSKDKQGYGYKYAELSKVLDTCRPILAEHNLVITQLVTVLNDEPTLVTTLFHKSGQFLRSCYPLVKAGVKQANDAQQVGAAITYARRYALTAMLFMAQEDDDAASVGKREQSSSPKSERPNNSNKSTQQAMNSTQANVTSKSVIEQLKDRLKGKTKKECGEIYDKSIVWLEEKHPDLVNEYNLMYNDYLLNLM*	mmseqs_cdd	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0058	shell	direct	high	653	0.998	GCA_001949885.1_01149
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	95404	95838	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	41500	41934	GCA_001949885_1_16_108	GCA_001949885_1_16_108	+	196923	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MARNTNTVILVGHLGSDPEIRQFQNGGQIATFNLAIGDDYRDKQGNTVKRTHWIPIVVHGNSADVARQYLQKGSKICVTGKLAQESWQDQNGNNRTALKVATQSFEMLDSKASSETQQPTKDKEKIDPLSAAAEQDGFNGDIPF*	common_virus_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0059	cloud	direct	high	434	0.998	GCA_001949885.1_01150
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	95847	95966	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	41943	42062	GCA_001949885_1_16_109	GCA_001949885_1_16_109	+	196923	.	.	hypothetical protein	MTKKLYRKPIYGGDGEEIGYYLMDNDGFVVEEHYYEDDA*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0060	cloud	direct	high	119	0.992	GCA_001949885.1_01151
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	96016	96912	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	42112	43008	GCA_001949885_1_16_110	GCA_001949885_1_16_110	+	196923	.	PRK00321	recombination associated protein; Reviewed	MYWFKNAIIYQLTKKTDFENIEKQLKECEFTPCSSADVSHFGWSAPLATRENLAHQANGKILLVAKREEKILPVEVVNRELNKRITALEEKEQRKLKKVERASLKDDVIATLLPQAFSRIKTTALYIDTLKQLIFVDAASSKTAEDALALLRKSLGSLPVVPLAFNRAPCEVMTKWVTDTAPDWLILREEVEIREKEDLGVIHCKQKDIEDEEIIELAKNGSVSKLALEWENNLKFILVEDGTLKRLKFDDNITEKNDDIVKENVTARFDADFILMTATLSELVKNLINEFGGEKERL*	mmseqs_cdd	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0061	cloud	direct	high	896	0.999	GCA_001949885.1_01152
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	96980	97336	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	43076	43432	GCA_001949885_1_16_111	GCA_001949885_1_16_111	+	196923	.	.	hypothetical protein	MKHPLWWRERNCEDVALANALKNLKRVIADKLPNGQKHEINQFIWDHLEDLTNLLINGASIEYVNLSKFEKVKLDDPFCRLVDVYFRHTTKGGFTGDEWAGDIAFVIDNRVWMFHFYS*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0062	cloud	direct	high	356	0.997	GCA_001949885.1_01153
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	97384	97725	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	43480	43821	GCA_001949885_1_16_112	GCA_001949885_1_16_112	+	196923	.	.	hypothetical protein	MNEININIPYSRFSDIFVCYFYVRMNSGDPSAVTRALDDAKYSWLMFGSELRNDIIRTVESASYPAVVNNYVNNFIEWANSQFNAPQDYNSARPLVDVLPVVDLKPYKGDKKC*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0063	cloud	direct	high	341	0.997	GCA_001949885.1_01154
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	98038	99003	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	44134	45099	GCA_001949885_1_16_113	GCA_001949885_1_16_113	+	196923	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MLDLLTENSHASCCGKTFQVCYPPRTTHSDTFWLDWLKNVSHYNRQGQDGQTLVMCIQPALSRGESSMLNTSVSPNDAKECLLWQVLDHEVSPRYSLSAKACAGILRRAETRKKTLPPTLKVALERISDQQWGGVVTASGGALGGGSETLVVHGTQDPIISSTTAHCLGRNGGQENILFDIAHRSDVVRIQDDDTTPTLTARMGTGGNNIPCIALAGNTIGRQPHNGGNGNGFDDSGVSYTLTATDTHGVFDNVTVRKLTPQECEKLQGFPPGYTQIPYRNKSASDCPDSPRYKAIGNSMATPVIKWIGERMINYIGDDTR*	common_virus_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0064	cloud	direct	moderate	563	0.583	GCA_001949885.1_01156
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	99000	99476	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	45096	45572	GCA_001949885_1_16_114	GCA_001949885_1_16_114	+	196923	.	pfam04448	Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	MSKYFSYDAIDVNLYVHDTAEEAKQSALDIAEDGYNLSSDQCDGLSKGSQDLIKSICYGVILGGIDLPVRQTSVEQDGADAVAKFKYMAQPPVIVEYEQNNGWIKCSERLPKPNTRVLICNRDKEVGCALYQELLGFGHIPLYGEVTHWRPLPPPPIE*	mmseqs_cdd	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0065	cloud	direct	high	476	0.998	GCA_001949885.1_01157
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	99535	100404	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	45631	46500	GCA_001949885_1_16_115	GCA_001949885_1_16_115	+	196923	.	CDD:cd03405	High-frequency-of-lysogenization-C-protein	MKKSIIHVVVACTIAASLSACSPFSVDEGEIGLVTRYGEIQETKSAGLHWRSWLEDDVVFSTREQKVTIGKFDDVGDITSGISAYTRDTQTVTTALTITFKLTDPVAVYKNYRNTDNMINQLLEPRSRQALEIVFSRYSAQLALENRAQLTNDITAQIREAVKGYPIEITAVQSVINFNKEYEKRVEESVQKNVAIQTEERNLIIQQKKAEIARVDAQAKADAEVIQAKADAEKVRLAGEAEAAAIRAKGEALKENRQLVDLTAAEKWNGVLPTTMTPSGSVPFVKVGQ*	common_virus_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0066	cloud	direct	high	869	0.999	GCA_001949885.1_01158
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	100495	100593	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	46591	46689	GCA_001949885_1_16_116	GCA_001949885_1_16_116	+	196923	.	.	hypothetical protein	MYFLGVLSGIAIAFAAQAFFRQYKLTERNKED*	.	hypothetical_protein	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0067	.	unmatched_CDS	none	0	0	.
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	100639	100878	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	46735	46974	GCA_001949885_1_16_117	GCA_001949885_1_16_117	+	196923	.	PFAM:PF13986.5	excisionase	MDINIYEDFLSKAEIEFLTGRKQKSLVVEQLNAMGIPFKRNANGYPIVRRDYDKVKSRTAKTESQNYENNAWRPSVLQA*	phrogs_hmm	nonviral_gene	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0068	shell	direct	high	239	0.996	GCA_001949885.1_01159
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	100888	101922	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	46984	48018	GCA_001949885_1_16_118	GCA_001949885_1_16_118	+	196923	.	PDB:1Z19_B	Integrase	MARPRKRENQGLPQNLLCRKRQRKNGKIVTYYYYVMIDKKEKSLGTDKHLAVLETAKLNCDRVLMKSEVATFLTVAIRYENEVLPMKAEGTQRTNKTNIKRLLEFFGNPPAPLDDIEPYHIKQYLDWRKHQTASANNEVALFHHIWMKAREWGYTKYSCPSEGIQRYKVKFRDIYVEDHIFEMLRESADPILRDLLDVAYLTGQRPVDIVNLQPSQIIDGVWQVRQQKTKNKVSIAIVGKLKEILDRRMTENKPYLFCNKYGNRLKPIILTHWFIKLRAKAAKKHPEFSDELLAVQFRDIRAKAGTDKFLSSDTESAQKQLGHTNAQMTRRYIRRNKIVQPTKI*	common_virus_hmm	common_virus	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0069	shell	direct	high	1034	0.999	GCA_001949885.1_01160
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	CDS	102088	102957	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	48184	49053	GCA_001949885_1_16_119	GCA_001949885_1_16_119	-	196923	.	TIGR01019	succinyl-CoA synthetase, alpha subunit. This model describes succinyl-CoA synthetase alpha subunits but does not discriminate between GTP-specific and ATP-specific reactions. The model is designated as subfamily rather than equivalog for that reason. ATP citrate lyases appear to form an outgroup. [Energy metabolism, TCA cycle]	MAILINKETKVICQGFTGAQGTFHSEQALAYGTKLVGGVSPNKGGTTHLGLPVFDTVREAVQATGATATMIYVPAPFCKDAIFEAIDAGIKLVVCITEGIPTLDMLLVKQKLNETGVVMIGPNCPGVITPDECKIGIMPGNIHKKGRVGIVSRSGTLTYEAVQQTTDEGFGQSTCVGIGGDPIPGSNFIDILKRFQEDPETEAIVMIGEIGGSAEEEAAAFIKSHVTKPVVAYIAGVTAPKGKRMGHAGAIISGGKGTAEDKIAALEAAGVKTVRSLAEIGSALRELLK*	mmseqs_cdd	nonviral_gene	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_CDS_0070	persistent	direct	high	869	0.999	GCA_001949885.1_01161
GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote	cenote	tRNA	79668	79738	GCA_001949885.1	MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885.1_MPJK01000016.1	GCA_001949885.1|MPJK01000016.1	GCA_001949885_1_16	GCA_001949885_1_16@C3	25764	25834	tRNA-Trp	tRNA-Trp	-	196923	.	tRNAscan-SE score: 47.0	Trp	NA	tRNAscan-SE	.	C3	49053	53905	102958	GCA_001949885.1|MPJK01000016.1@region_53906_102958@tool_cenote_tRNA_0001	.	.	.	.	.	.