core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	2	1099	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	3	1100	GCA_002087075_1_55_1	GCA_002087075_1_55_1	-	29204	.	PDB:3GUD_A	Neck-appendage-protein	MIYLTEGNRPLNESYNDEIVHLGNNTYQLTFRFPTSDPKWELLKEETFLTADDLHGEQDFYIFEVEKQQGYIQVYANQVISLLNNYIVSSIEVDRVSGTRVLSAFAGSITRANPFSFFSDIDDRHTLNIKDKNAMEVLAKDKHSILGQWGGDMVRNGYNLRLLKNGGSENESLFMYKKNLSSYQHKTSTKSLKTRITFKTTVKGEGENAVDHDYMVVIDSPLLGNYSQIYEDVVEVNDQDVTDEASLIAYGKQYFRTSMCDMLEDNLEISVVGQSDVAVQMFDVVSIYHEWYGLDVRKKITKYTYSPMAKRLKSIGFGTFQSSLANAIGGIVNDAVLNESRNLHQIFEERLKKEIANADRAFDAEF	hallmark_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0001	persistent	ambiguous	low	3	0.003	GCA_002087075.1_02018
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	1096	1794	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	1097	1795	GCA_002087075_1_55_2	GCA_002087075_1_55_2	-	29204	.	PDB:2X8K_A	Distal-Tail-Protein	MFYMIINGFNTSTIPHCVVTDFGQVEAAKPRVAEDANLYGANGSYRVLDGGYESYERTFSFYIPKLLDVSTIVEKFQPKDNVLEFSYQLGSVFYADFIGAKYKPQGMHAWKLELKLSMQPFRYQKNLAPLIFTASGNVNNPGSVYSEPVIEIEGDGDISLTIGRTTMHLTIRRKVTIDCRHKKQNIYNADGVVQNTLRKRGGFFELAVGNNGLVFTGAVRKVTVRPNWRYIL*	hallmark_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0002	persistent	direct	high	698	0.999	GCA_002087075.1_02018
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	1794	5969	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	1795	5970	GCA_002087075_1_55_3	GCA_002087075_1_55_3	-	29204	.	PFAM:PF10145.8	minor-tail-protein	MASGTPLGQMYIELGLDVSKFSPTLTGAKNAVKYFQNNVRSLDSTLKGNEKNASLLQAKYKTLGQAIDSQRKVLDEMKKSFDKLEPGTAKFDKAAADIQRENAKLAVMEGQLRGVEKALQDVGRENSWSGKMDTLSENFAKGGEKLRAMGDAMKPVSAALLAGFTLSTKKAIDFESQMNTTKSLLADTIPIADELNSTTQKLGESSKNWAKQYGISTASINEGMQEIIKKGFDANQTIEAMPAILDAAKASGEDFNTVMNATTNILQQFGLSTQDTERVTNSLTFVANKTAAGFADMGAAMEYVGPVAKNVGMNLEETAAAVGLLSNNGIAGEKAGTALRGALTRLLKPSEQNANAMEKLGFSAEEFRSGAIKLPDILDRIKKNTEGMTDAQKSALIATAFGTEAQTAMNILVDQGGDALRNLANETKGATTYTKDLANELSKSSKNGVERFKSSLEVLQINIGQKLLPLLTPVIDKVNQFIDWLSKAPPAVQSLAVGIGGFLALGYPFLNFLGNGATALSILIKHAGKLEGLLKDGLGLAKLTERAGKLKGLLQGGLGLAKVGSEATVLAEGAGAAASSSSLLSGAIGALTNPIGLLVGGAALLAGGLVYLGHKKDEARIKAEEFGSQLSDTARKELRDFQSKVDDTSTAVANFGTHAGDAEKVSEAFRKLHEEVAAGAEKANQRMEELAKKLGFSDEEIAKMKVKNDQVVSNTDAMANQVSEIYKRHNGDASKFSQEEKEIVLNNQREMIKARIEMMELSGEQQKAALQALNGEIGSLNETQLKHTRDVLKKALDEENQLYKTSKDGLKQLLDAKRIDQETYNKKIQELETNHQQTMEALGTKYYQVMQNLDAKVKARTGQSWNYWEEAKKVLEEYGLSYEVIGQKAAEASQKMGDSHSILAKYTSDMSKETREANDAWSLLVGNIDENNNFVIKSNVKEVIGEATKSAEGWEQLQFIVKNANINSNVRVTIAEALVESGKWSTMTLEEKQLIVQNQAGLQAIFDSENHLRIWNSMPAEVKQLLLENTDVMNKAEEASKALYNYDALTPKQKELLATDENFRKAVARSTDTLTTWNAITPFTKDLKLDPTNVLNNGQLSIDKIMAWNLSNPENKSLNAIDNTSEAVASAKASVNSPKQEKPIDLLAKDQTAGVRNETSAAINAIKQHNPVDILAKNSTSSTVSEVKSVVNSIQDKTVTINAQDNASGVLAGIRSWITRVTGDFFTNVFASRHAHGTNYHPGGLAMVNDQRNSTYKELVTLPDGRSFIPEGRDVLLPLPKGAKVLRADKTKRLMREMGVPKYAAGVGIPSDAKFLREMEEAQAKIVVQTKGDTNSKDSDKVVSEIAILRASMEKILTAILEKPSDTYLDADKISMSVYQRQGAIYAREGM*	hallmark_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0003	shell	direct	high	4175	1.0	GCA_002087075.1_02019
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	6026	6256	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	6027	6257	GCA_002087075_1_55_4	GCA_002087075_1_55_4	-	29204	.	.	hypothetical protein	MSRKEKACRRYWFWFTIFILYLAFGLYCICTNFVDIFGMLLLSPFIFASLPLYAYLFLGMFIWAFMNMAMDDFYKE*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0004	shell	direct	high	230	0.996	GCA_002087075.1_02020
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	6505	6798	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	6506	6799	GCA_002087075_1_55_5	GCA_002087075_1_55_5	-	29204	.	.	hypothetical protein	MAKVQFTIKNDKGEDVLKKSKEITTRDYRDYLVMNESLTSDLSEVEKLDKQLGFIASLFDDVTVEQLLEYTDFAKVISIFTAIYAHLVGDVDPKEKS*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0005	shell	direct	high	293	0.997	GCA_002087075.1_02022
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	6844	7440	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	6845	7441	GCA_002087075_1_55_6	GCA_002087075_1_55_6	-	29204	.	PFAM:PF04630.11	major-tail-protein	MTVKGTALIGLKSVTIRVHDGQTPTVGQNLFTLEGKDNEGATQTARVTGLSSDPVKTYGSNVAYHVSNRGVGDVKVEMGLLDVPLALYTNALGYGDDDGIYYFGADTVAKNVSILIESNTADGEPVYYGFYKGQLSMDAIDFETLKDKANELATTSVNFTATASSDVATKGRYGAIVYGSDAEKLKKLKGQLNITAAG*	hallmark_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0006	shell	direct	high	596	0.998	GCA_002087075.1_02023
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	7457	7837	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	7458	7838	GCA_002087075_1_55_7	GCA_002087075_1_55_7	-	29204	.	PFAM:PF05657.10	tail-component	MIKDKLTELYDALEEDESLSGISIKSFERPESLGDGETSIVIIPVGPPMQTAHGSNTSLAKTFLYQINVESTNRVECKELQGRIEKIMEEQGFYQTEGGLEQWIPDIKRYVDVRTYRGMSALYEKY*	hallmark_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0007	shell	direct	high	380	0.997	GCA_002087075.1_02024
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	7837	8235	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	7838	8236	GCA_002087075_1_55_8	GCA_002087075_1_55_8	-	29204	.	PFAM:PF04883.11	tail-component	MSSGANLKGFDDILRNIEARLGEPVVRRKVNRALKETVEEFEPTFKRAMAVYADTGKTVGAVVHGNVTGTSSGVPMVKLGFKSPRWTIIHLNEFGYAKNGHPRGFGVMRRFFEASKPVFKSKVGMKLKQEFL*	hallmark_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0008	shell	direct	high	398	0.997	GCA_002087075.1_02025
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	8228	8617	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	8229	8618	GCA_002087075_1_55_9	GCA_002087075_1_55_9	-	29204	.	PDB:2KZ4_A	head-closure-knob	MKRSEGPSYRYKKPESQNGDLRTPLTFYTSKIKKGVDGRDVSYEKAFYTMGQTYSPSMKDVEIATGKAMKAKMTLKIRDPLTDYQPENRHFVEVGDIRLVGKKWQIIDVRPDFANRDFLIVLIGGGRDV*	hallmark_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0009	shell	direct	high	389	0.997	GCA_002087075.1_02026
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	8604	8792	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	8605	8793	GCA_002087075_1_55_10	GCA_002087075_1_55_10	-	29204	.	.	hypothetical protein	MIKVLKEFYDLKEGVLRQVGERFEATEERFAELKEHLPDYVELEKSSRSRSSKEVVSVNEEE*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0010	shell	direct	high	188	0.995	GCA_002087075.1_02027
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	8785	9075	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	8786	9076	GCA_002087075_1_55_11	GCA_002087075_1_55_11	-	29204	.	CDD:cd08054	Head-Tail-Connector-Protein	MEIEAKLHSLLIPFKERMRIFHSGEDANLSRMLESSQMVITRLVGSGNIHDHQIRELILERARYVYNDQVEFFYENFKADILALSLDKIEMEDSDD*	hallmark_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0011	shell	direct	high	290	0.997	GCA_002087075.1_02028
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	9089	10204	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	9090	10205	GCA_002087075_1_55_12	GCA_002087075_1_55_12	-	29204	.	PFAM:PF06673.10	Major-Capsid-protein	MMKLGNEFTTARQNFMNAVETGAPMEEQNKLYNEMIEALTDKLQDDAREAARKEIATMNPYDAQLTAEAREFFNNIEKLPPKGIEKLFPQETIDRIFEDMVAARPLLQHIGLRNAGIRLKFLKSSRTGQAVWGKINAEIQGQLKQEFAEEEAIQSKLTAFVVIPKDSEKFGPAWLQSYVSIQITEAFAAALEAGYLNGDGDNKPIGLSRTLTGTAESEKVTYAEKQAQKKPLTFADSATVVKELTEVYKYHSTKADNTTPVAVEGNLVMVVNPVDAWDVKKQYTSLNAQGVYVTAMPYNLILVESVAQASGKVTTFVKGRYDAFVGGGIEFGRFTETYALEDLNLYTAKQFAYGKAHDEKTAAVWTLSIAK*	hallmark_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0012	shell	direct	high	1115	0.999	GCA_002087075.1_02029
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	10223	10945	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	10224	10946	GCA_002087075_1_55_13	GCA_002087075_1_55_13	-	29204	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MTIIQIKGAIVSNDDRWFYDWLDMDATAPKDIVLPTTGEDVEVHINSGGGDVYAGSEIYTALRAYQGHVTVKIVGIAASAASVIAMAGDQVEISPTAQIMIHNVSAGVRGDHKALLHEAGVLEGFNKSIAYAYIDKTGKALDDLLDLMEGETWFDARSAVNHGFADKVMFESQEAPVLVASQTPVIPRDFIEKIRSAMTPDVELLADLVRDRLNNSLPIPEDKKKEDKTAEPVGLGRFPF*	common_virus_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0013	shell	direct	high	722	0.999	GCA_002087075.1_02030
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	10926	12074	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	10927	12075	GCA_002087075_1_55_14	GCA_002087075_1_55_14	-	29204	.	PFAM:PF04860.11	Portal-protein	MGFLNLFKRDAPDVGFDFEELERMLGCLQLKSLAIDKSAEFVARIFAKSEFRYMVENHHVTSDWDYILNVRPNKNESASEFWQKVIYRLLTKNEVLIVLSDDKQLLVADAFTRRRYALYDDTFEMVSVGDYTFQRKFAMSDVIFLQYNNNRLQEYVSDLFSDYEKLHTRLVEALARNNQIRGVLATKANGTFDEDKRKKLQRYADNLFKSFTSKTVAIVPTMDGVEYSELTNTVGTTNLSVEELKKLRRQFDDEVADILGLPTALMHGDMADLSNSQKMFNSYCYESLVKKVGDALNHAMVSSAGYANQKKFVIFGEGGLDKFALAENIDKLISSGAMTRNEVRLELGLEAVPGGDSFLITKNYQGENEIEKGGNEDDNHSD*	hallmark_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0014	shell	direct	high	1148	0.999	GCA_002087075.1_02031
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	12130	13770	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	12131	13771	GCA_002087075_1_55_15	GCA_002087075_1_55_15	-	29204	.	PFAM:PF03354.14	Large-Terminase	MISHPLVDDYIKMAENGEVVVNKERKLLFKIIKEKIYPRDDLYFDNDLIDKFIRFAEKNFFPLAKYQLFLTPFIFLFRKVDEEPHFDEYLYTLARGGGKNGFMSARSSFFISPIYPIRDYDVTITANSEKQGKVSFEEVYETIQRRGLEDHFYLTKMSITGRANNSVFSFRTNNPKTMDSARDGCLEFDEIHQFEDDKAVKVQRSGLGKIAHARTFYNGTNGYVREGFYDKLIEKSMQILNGEVDDFRLFPFICKLDSADEVDDMKNWPKANPMLDESTPYAKRLLARTKADYDDLELEPSGRQEFMTKRMNLPEADLEKDVTTRERLLACLRSPGIDLLGKSCVAGFDYASIRDFASVGLLFKNGDEFIWKQHSFARKAFLKAFKLKAPIQEWADRGLFTIVDGPSIDPRLLVEKLNEWSKFYQIELVCADGFRMDLLKPLLEEAGFEYEFLRNPGAIQSKVAPIIEDGFANERFVFENDNSMIWYTDNTYVKEDKDGNKRFLKKEPVRRKTDGFHALIAALYKRELVHESNVGEFLDMLEDWEF*	hallmark_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0015	shell	direct	high	1640	0.999	GCA_002087075.1_02032
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	13767	14105	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	13768	14106	GCA_002087075_1_55_16	GCA_002087075_1_55_16	-	29204	.	PFAM:PF05119.11	Small-Terminase	MEEYSEKNIKELENQLLSKIGYFSPRKKDAIQYEKVNRYLYLVRLLYELKAKLHEDGLVITVHNGQQRFQKANSLIKEINTTSNQLLAIERSFDFDVENSPVEKATSGSDLL*	hallmark_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0016	shell	direct	high	338	0.997	GCA_002087075.1_02033
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	14224	14520	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	14225	14521	GCA_002087075_1_55_17	GCA_002087075_1_55_17	-	29204	.	PDB:5H0M_A	HNH-endonuclease	MIEVSTREERNQFYNSSEWRTIRRQALKRDHYECVWCRDEGKVTTTNLEVDHIKELEFYPEFALDIDNLRTLCKACHNKRHDRFDKNDRNFRKDEWWG*	common_virus_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0017	.	unmatched_CDS	none	0	0	.
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	14734	15276	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	14735	15277	GCA_002087075_1_55_18	GCA_002087075_1_55_18	-	29204	.	CDD:cd01192	site-specific-tyrosine-recombinase	MNIVEPIRDKDDIQAMKDYLREWNERNYILFLFGINSGLRVGDILKIRVKDVQGWYIKLKEQKTGKKKKIKMTKTLKREVREYIQNKPHHHFLFQSRVGKNKPLDRRTVDWILKVAASECGIENIGTHSMRKTFGYHYYKKTKDIAMLMSLFNHSSPAITLRYIGIRQDQQDKAMSNFGL*	common_virus_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0018	shell	direct	high	542	0.998	GCA_002087075.1_02034
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	15576	16004	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	15577	16005	GCA_002087075_1_55_19	GCA_002087075_1_55_19	-	29204	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MQIELLDIIDEKKTRKEAIKVLKKYSRLRRIAGEEYAPKITISYSLEPRSSSGQTSKQVESMVLRRVSAQQDLELIAKAINNLSDMEYTRILIERYCRKKRREDYSIYSELGYSSSEYYRILNKALLEFAESYQASNLLVYK*	mmseqs_cdd	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0019	persistent	direct	high	428	0.998	GCA_002087075.1_02035
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	16075	16305	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	16076	16306	GCA_002087075_1_55_20	GCA_002087075_1_55_20	-	29204	.	PDB:2FJR_A	Repressor-protein-CI	MKDKLNPRQASRFAFLLKQKRKERKLSQEKLAAKLGYSRYLIAKWEKEESVPNIYNVEDICTYFAFPADIILGSRA*	common_virus_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0020	shell	direct	high	230	0.996	GCA_002087075.1_02036
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	16295	16474	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	16296	16475	GCA_002087075_1_55_21	GCA_002087075_1_55_21	-	29204	.	PFAM:PF04936.11	host-nuclease-inhibitor	MNEYALYQGETFVTIGTLEEISKETGIAERMLKYYTFASTQKRHPNGRAVIKIEVDDEG*	phrogs_hmm	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0021	shell	direct	high	179	0.994	GCA_002087075.1_02037
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	16467	16580	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	16468	16581	GCA_002087075_1_55_22	GCA_002087075_1_55_22	-	29204	.	PFAM:PF11753.7	kinase	MTDNINKPSHYQGANGLEDLKKARKNLDWLIEEMEHE*	phrogs_hmm	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0022	shell	direct	high	113	0.991	GCA_002087075.1_02038
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	16582	17094	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	16583	17095	GCA_002087075_1_55_23	GCA_002087075_1_55_23	-	29204	.	PFAM:PF13921.5	transcriptional-regulator,-D5-like	MAGRRWTEDEVDYILLAHNDNESTVEEVADFLGRTVSSVRCKSEIINKGKGQFTKRHWQDEEIRILRRYYQKVQDLNQLAKILNRSLDAVIIKANRLGLPRRKKKWDISKYDIETLGKMGMSCRQIACQLDRPLRLIRAVVYHYKIPVGKEEIQQHPWSFDNDMIFMRRT*	phrogs_hmm	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0023	shell	direct	high	512	0.998	GCA_002087075.1_02039
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	17081	17260	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	17082	17261	GCA_002087075_1_55_24	GCA_002087075_1_55_24	-	29204	.	.	hypothetical protein	MPDVEWIMENCHMMRDNGIWAGEKQISYASPDGQYTYYVNKRKDGTYYLHGAYKHYGRT*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0024	shell	direct	high	179	0.994	GCA_002087075.1_02040
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	17253	17660	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	17254	17661	GCA_002087075_1_55_25	GCA_002087075_1_55_25	-	29204	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MIPKFRAWDRLRKEMNYKVMVGSCDTDDENWTCPIIWIEDRKKWLHFDDYDSIMQSTGLKDKNGKEIFEGDVLEIEDEGEVLGNAKLTWDNEQAVFMIEAVSVDDIAPFHEILSDESYSYRVVGNVYENKELLDA*	mmseqs_cdd	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0025	shell	direct	high	407	0.998	GCA_002087075.1_02041
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	17657	17917	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	17658	17918	GCA_002087075_1_55_26	GCA_002087075_1_55_26	-	29204	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MKRFIAIWILVSAGLNIWQMDRIAELEKKKPMVIYKADNAGAEIFGKVVEKGRHGKLYTLTISDYGVFVVTKDVYEKVKVGDEVML*	mmseqs_cdd	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0026	persistent	direct	high	260	0.996	GCA_002087075.1_02042
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	17914	18108	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	17915	18109	GCA_002087075_1_55_27	GCA_002087075_1_55_27	-	29204	.	.	hypothetical protein	MKKITFIIGLGGEQIEFKTDRDDFINELKFRYENKQLLEINLGPEIVLLNPSKILFVKIKEVTD*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0027	cloud	direct	high	194	0.995	GCA_002087075.1_02043
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	18108	18365	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	18109	18366	GCA_002087075_1_55_28	GCA_002087075_1_55_28	-	29204	.	.	hypothetical protein	MIIKNYKYDFSSGRIRYTIDVDGYETAMEHTKTEYGSVQRNDIDDFLLSVENNDFQEAEMVEEFVDFQSHLLMYGIDFELRNGVE*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0028	cloud	direct	high	257	0.996	GCA_002087075.1_02044
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	18365	18910	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	18366	18911	GCA_002087075_1_55_29	GCA_002087075_1_55_29	-	29204	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MNKQELINVPRILFPIGTEILIKGKIVGLKVLADRFVENIVKLDYGEQIIAPNDAIYVKDEPQPVKVPQFVAEFITEQKKLGHTLSYSIDASMSDIVAEWYWDNSELFALAWIFGYEVEKEKRYIVSLKNGQPLTKTQSGKALYFNQNIITGNYKFTRKELEEAGFGWVFDCPGIEIEEVE*	mmseqs_cdd	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0029	shell	direct	high	545	0.998	GCA_002087075.1_02045
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	18912	19229	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	18913	19230	GCA_002087075_1_55_30	GCA_002087075_1_55_30	-	29204	.	.	hypothetical protein	MMEDLKQKVNAVYNWTVEDGKAKPPKQDLPQAVKDRVDYFWEMAEDGMTFMGAMECIFADEKPTDYDLGATKGWLPKSKEFDDWVGYSPSMAQVVIAVYLIYRGN*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0030	shell	direct	high	317	0.997	GCA_002087075.1_02046
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	19201	19533	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	19202	19534	GCA_002087075_1_55_31	GCA_002087075_1_55_31	-	29204	.	.	hypothetical protein	MKYKVTEYHSDFQEEQTGTCELCFGTAWVENGSITVEDENGTETEIYLTVWDWGDYDTIYIDNVVNFSAWLQEREVDPIVEETEPWSWLHELVEKYNEELEDDGRFKAKS*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0031	shell	direct	high	332	0.997	GCA_002087075.1_02047
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	19523	19714	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	19524	19715	GCA_002087075_1_55_32	GCA_002087075_1_55_32	-	29204	.	.	hypothetical protein	MNYDKQVVIEGLKRTIEQNEEKIIEYSKPCDARKRRIRALERDLLKKKNKELRKKVEELEDEI*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0032	shell	direct	high	191	0.995	GCA_002087075.1_02048
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	19701	19868	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	19702	19869	GCA_002087075_1_55_33	GCA_002087075_1_55_33	-	29204	.	.	hypothetical protein	MVGVTYQEIHLFVEFLKKQYGQGRPDYIEALNDLDGMAEVSYREAIERFLDDELR*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0033	persistent	direct	high	167	0.994	GCA_002087075.1_02049
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	19884	20279	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	19885	20280	GCA_002087075_1_55_34	GCA_002087075_1_55_34	-	29204	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MINNVTLVGRLTKDPELKYTPSNVAVATFTLAVNRNFKGANGEREADFINCMMWRKQAELFAEWCKKGNLVGVTGRIQTRNYENQEGRRVYLTEVVADGFERLEKRDDTANRSNIEEQMPGYALEEDDFPF*	common_virus_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0034	persistent	direct	high	395	0.997	GCA_002087075.1_02050
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	20272	20373	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	20273	20374	GCA_002087075_1_55_35	GCA_002087075_1_55_35	-	29204	.	PFAM:PF00436.24	single-strand-DNA-binding-protein	MIEFIKEFGITFLCFFIGYSVVECATGKEKKDD*	phrogs_hmm	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0035	shell	direct	high	101	0.99	GCA_002087075.1_02051
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	20370	20594	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	20371	20595	GCA_002087075_1_55_36	GCA_002087075_1_55_36	-	29204	.	.	hypothetical protein	MLELYFVYNGHCKFYLGTFDNVDDLIEQMEDHQWAFSAITQPRFQKHIGQRTTRFDYGAKDCYYLATFFRRRRK*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0036	shell	direct	high	224	0.996	GCA_002087075.1_02052
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	20594	20788	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	20595	20789	GCA_002087075_1_55_37	GCA_002087075_1_55_37	-	29204	.	.	hypothetical protein	MFILRHGTREDKPFLKSVVIGVTGLDISYSEEKKAMQFVSRGVAVQVGKALRGSFGNFYPVEVE*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0037	persistent	direct	high	194	0.995	GCA_002087075.1_02053
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	20803	21573	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	20804	21574	GCA_002087075_1_55_38	GCA_002087075_1_55_38	-	29204	.	PDB:4M4W_K	Replicative-helicase	MVDNVFEEIALSYHRNTEQQDEFCEKHNIPLIKILRTESVVCRMCESERIHEENQARVNELADAENERERKYYLEKFSLYDEVLKNATLDNFETPTEKEAEKLAFAKRICREWSEGARNNIVLQGEAGTGKSHLAFAMVKALSEYTKEIAIFINVTDLLMKIKADFSQEEFLVNKIASAKFLVLDDLGMEKDSEWSFTILYNILNKRSNTIITTNLISADIQKRYGRPFMSRLMKGVDKDHLMVFNDLTNKRKHYF*	rep_hall_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0038	persistent	direct	high	770	0.999	GCA_002087075.1_02054
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	21567	21725	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	21568	21726	GCA_002087075_1_55_39	GCA_002087075_1_55_39	-	29204	.	.	hypothetical protein	MGILELIEQFEIDYYPLSYEKKTLLADQPIHQVVACLSEMASWHECGGRLSW*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0039	persistent	direct	high	158	0.994	GCA_002087075.1_02055
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	21713	22531	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	21714	22532	GCA_002087075_1_55_40	GCA_002087075_1_55_40	-	29204	.	PFAM:PF09681.9	replisome-organiser	MLGMSEIKWIKITTDIFDDEKICLIDALPDPDAILVIWFKILTLAGKHNSNGLLMMTDKVHYTDEMLATIFRRPLNTVRMAIGVFEQFGMIEIIDGIISLPNWEKHQNVDGMEKIKEQTRNRVAKYRKKQKNLALGNVTGNVTVTDGNALEEDKDKNKNRLDKDKNKKRITTTTSSGGQENILELFQSEFRRLLSGFEIEEINHLLNENDVDLVKEALKTAINSGKPNIKYIGGILRNWQMNNVTTVEQVRQSEKKNKDKKEEQEAKDEWGY*	rep_hall_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0040	persistent	direct	high	818	0.999	GCA_002087075.1_02056
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	22515	22811	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	22516	22812	GCA_002087075_1_55_41	GCA_002087075_1_55_41	-	29204	.	.	hypothetical protein	MEELIESLDNLIMIVKELEGRESTSRHFITTWENDYKNLLLVKEYLTDYKKLAKDYRDVELKNKLLKIEKMELEGRYIYEDMRMKYRANRRKWGARYV*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0041	shell	direct	high	296	0.997	GCA_002087075.1_02057
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	22827	23147	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	22828	23148	GCA_002087075_1_55_42	GCA_002087075_1_55_42	-	29204	.	.	hypothetical protein	MFEPPILDQLMGVGALLIGFAGACRHIKLQEQRKEEERREEQEFASMIIQVRNHAYERGREDKWQEIRKNIRREFKGFTYDNEPPVGLRPEPLALPEPKQSAIRLL*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0042	shell	direct	high	320	0.997	GCA_002087075.1_02058
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	23158	23880	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	23159	23881	GCA_002087075_1_55_43	GCA_002087075_1_55_43	-	29204	.	.	hypothetical protein	MNNKKAYKHKMKKENRPGLRNFFERYEHEDENLKKIVQDLSNEKFNPLDKPNDYNGSFGHDFMSIMWATLLIDILKNLRKEVSSSASDLDLKLGFTKGYPMASIVNTQTKPTKKNVKILSKIFDRMHILFPEETKRARERESLDKYIDVNEILQRTLLLHGFNESANALKNYENEIDSELESDEQTETDNRIMSNIYELVISDTIIQFNEDDTVLSVLKKIKEQTNLKFEVFETLKEKVI*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0043	shell	direct	high	722	0.999	GCA_002087075.1_02059
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	23892	24182	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	23893	24183	GCA_002087075_1_55_44	GCA_002087075_1_55_44	-	29204	.	.	hypothetical protein	MEGITLQLRLDGESAELFTNQLLAFAEKQVKEQLENDRMPINQQALMEKFGFTHSYIKKLERKGLRFRKQGKYIMYDINDVYEILELEKEVRKLRA*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0044	persistent	direct	high	290	0.997	GCA_002087075.1_02060
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	24287	24430	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	24288	24431	GCA_002087075_1_55_45	GCA_002087075_1_55_45	-	29204	.	.	hypothetical protein	MEDKIIELADYFISESTTYREAKIACEKLFRQVSHEIELRALESKTV*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0045	persistent	direct	high	143	0.993	GCA_002087075.1_02061
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	24547	24771	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	24548	24772	GCA_002087075_1_55_46	GCA_002087075_1_55_46	+	29204	.	.	hypothetical protein	MSKLSHKPNHVVKKLTWENLDNILLSNFSESTTDKPSAVIQLSDFEMSKTEIIEEATAQGYQVIDNSDGYLKFL*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0046	shell	direct	high	224	0.996	GCA_002087075.1_02062
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	24734	24976	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	24735	24977	GCA_002087075_1_55_47	GCA_002087075_1_55_47	-	29204	.	.	hypothetical protein	MRPRRYPYSGKRKKQSDRQIAKLKRDIDVNRTNISSLKFVIETLSNHQIAKLKRDIDVNRTNISSLKFVIETLSNHQNYR*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0047	shell	direct	high	242	0.996	GCA_002087075.1_02063
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	24990	25700	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	24991	25701	GCA_002087075_1_55_48	GCA_002087075_1_55_48	-	29204	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MNEIFNFHGQEVRTLTIDDEPWFVGKDVADILGYSKARNAIALHVDEEDALKQGIPTSGGTQDMLIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIREDLDEDAFIALFTGQKKLREQQTTMLEDIDYLKSEQPIHPSYAQSLLKKRKARVVACLGGIDSPAYADKIFAQSVFRQAEIDFKDHFNISRYDLLPKKHADAALAYWMTWEPSTNTKMKIMELNAFSQA*	common_virus_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0048	shell	direct	high	710	0.999	GCA_002087075.1_02064
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	25748	26008	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	25749	26009	GCA_002087075_1_55_49	GCA_002087075_1_55_49	-	29204	.	.	hypothetical protein	MSSLSKNLLPIQNLEIKIDSDSSIPRVILNGIDFQAEDIGLQGIKIIWETKTDEVPETLIQVDYINNREAPHIVSVKQSFKNTLLK*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0049	shell	direct	high	260	0.996	GCA_002087075.1_02065
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	26048	26200	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	26049	26201	GCA_002087075_1_55_50	GCA_002087075_1_55_50	-	29204	.	.	hypothetical protein	MANKEFKNSYIDRKKLSSSLKTLMTQQAIERAELAESQRKELEKFLKDLL*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0050	shell	direct	high	152	0.993	GCA_002087075.1_02066
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	26266	26796	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	26267	26797	GCA_002087075_1_55_51	GCA_002087075_1_55_51	+	29204	.	.	hypothetical protein	MPQITNDNVQIWTLYITVIIAVIGFVFNTISLWQTKKATEDMAKPYINVYVDVYAVKNQQRTFVFKNFGQTPAYIDNIQIDGELDPLNSVHRFNSLIGNMIAPGQKFTSSIDPDYKGRITLTITYSDSKKHKYINKFVLDATLASAMFYTVNESNKSDSPATAIRQSTMALLRDLR*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0051	shell	direct	high	530	0.998	GCA_002087075.1_02067
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	26822	26962	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	26823	26963	GCA_002087075_1_55_52	GCA_002087075_1_55_52	-	29204	.	.	hypothetical protein	MNANVNVFYELTCKDLNEAIDAKNKIIANTLDDETVEIKIEFLRDV*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0052	shell	direct	high	140	0.993	GCA_002087075.1_02068
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	26995	27186	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	26996	27187	GCA_002087075_1_55_53	GCA_002087075_1_55_53	-	29204	.	.	hypothetical protein	MEVFLYVVIVSAITSFLVTVMLLRGYSNRLTEMLENFFDNELQARKEIQKLTLDTMDRIANKK*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0053	shell	direct	high	191	0.995	GCA_002087075.1_02069
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	27196	27393	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	27197	27394	GCA_002087075_1_55_54	GCA_002087075_1_55_54	-	29204	.	.	hypothetical protein	MNNAAQKVTRIDRDAWEIATELANEYGVSICHIISESVRYCAENAEFKEMDVVVKRLVVGSKVLE*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0054	persistent	direct	high	197	0.995	GCA_002087075.1_02070
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	27405	27590	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	27406	27591	GCA_002087075_1_55_55	GCA_002087075_1_55_55	-	29204	.	PFAM:PF13744.5	transcriptional-repressor	MYGAKMRELRMAQKLGLRELAKRTLIDYTTLSRIENDLKAVTLSQAVVIAKALGCRVEDML*	phrogs_hmm	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0055	persistent	direct	moderate	171	0.919	GCA_002087075.1_02071
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	27707	27916	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	27708	27917	GCA_002087075_1_55_56	GCA_002087075_1_55_56	-	29204	.	PFAM:PF13744.5	transcriptional-repressor	MQILLYKLRKEKNISQKEMADVIGKSENSYRNKELGKQDFKLSEMFKIAHYFGKELGDIFTPQTSRKVK*	phrogs_hmm	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0056	shell	direct	high	209	0.995	GCA_002087075.1_02072
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	28097	28222	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	28098	28223	GCA_002087075_1_55_57	GCA_002087075_1_55_57	-	29204	.	.	hypothetical protein	MRRRKKPEKATKKEPWLDGPKALVISTVITASVELIKHFLK*	.	hypothetical_protein	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0057	shell	direct	high	125	0.992	GCA_002087075.1_02073
GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote	cenote	CDS	28388	29203	GCA_002087075.1	MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075.1_MWSM01000058.1	GCA_002087075.1|MWSM01000058.1	GCA_002087075_1_55	GCA_002087075_1_55@C0	28389	29204	GCA_002087075_1_55_58	GCA_002087075_1_55_58	+	29204	.	PDB:2FJR_A	Repressor-protein-CI	MTDKELAIYIGTKIKEYRLQRGLTQKELATLVDMGDTTIANYEKGFRTPKKNTLFKISSALSVTIDDLFPPIRKADTPTASPDSLTQQINDKLVQLTPDNKKIVLRTSEELLKSQDANGEMYTEQNEEETKINEVSEKVIDLYQVEVVSETAAASGFNYGFGYDDTDRETIEVDEQPPRHDIATKVSGDSMQPDYQDGDILYLVDKGLTTYNGDLAVIAYGDRSYFKKIYTENGRLRLVSLNDKYEDITLDFPPAEDTHIKIYAVVGVYRGE	common_virus_hmm	common_virus	C0	29205.0	0	29205	GCA_002087075.1|MWSM01000058.1@region_1_29205@tool_cenote_CDS_0058	.	unmatched_CDS	none	0	0	.
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	2	1105	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	3	1106	GCA_002087075_1_57_1	GCA_002087075_1_57_1	-	30959	.	PFAM:PF07902.10	minor-structural-protein	MDALTRRQFDRAMFAKERTLAIRVGDYTSRDIKEASFEYGYIKGDTYKPGGTCAGSGKITFTSIITTFNKLDTLHPEIGLLVGDTYQWVKMGEYFINDIEIDRNRNTTTLELMDGMFKLNREYVTDLHFPAEVREVIQEICLKTGIELANDYFGISAMRYHVEQVPEGKKLSFRDMLSAMTQMIGMSCFFNREGKMEIRDLTESNITINADSYFLHGLTKSEIEYQIAGITCKTDKKPLTVGMKTGRSLELDNVFMTQSALNDLYYNLKNLTYYPYNLNYQGHLLLEVGQWVTIQTNKKETFKVPVLSQSFTFKGGLRGRISADSKAGNDTQYSYEGTITKQIKQQDGIEAKIQAQIEAADAAFDAEF	common_virus_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	1110	1460	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	1111	1461	GCA_002087075_1_57_2	GCA_002087075_1_57_2	-	30959	.	.	hypothetical protein	MAQLTINGVAVKPPKSFQVGIQDIDGETGRNANGDMVRDRITTKRKLDCEWGMMTQGELSQLLHAVSSEFFEVSYPDPMDGQVTKTFYVGDRTAPSYSFTEKFKPWSGAKFNLVER*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0002	shell	direct	high	350	0.997	GCA_002087075.1_02089
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	1469	4495	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	1470	4496	GCA_002087075_1_57_3	GCA_002087075_1_57_3	-	30959	.	UniProtKB:A0A0R1V141_9LACO	minor-tail-protein-	MAMIESTEAFKKFANGQSWQQLDYQTQQQIRLMAILEQATAKYGNTLSNSVNGRISLFKSLMKDAALNLGNSMLPIINAIMPVLNSFAMVLKNVTAKLAEFIALMFNKKATVKDGVGGAVGDMGNAMKDAAGGAGDLADAVDDAGDSAGGLADNLGDSAKNAKKAAKELLGLLGFDEINILQKPKDDDAGGSGGGGKGGKGKGGGGGPFKDILPEVELTDMDNQFKSIFDGLGDKLKGLFDLFKKGFDAAFGPEGIERIKTALDQIAKTMGEIATDPRVVNAFNRMAEKIAYALGQVTGSIATIGLGIGVFLAESIANGLGRQKERITRALVALFDNIGNIAEAVGNIAQAFSSAFYDVITSTGAVRIGSAIVSTLLSLTSTIVEVGSKLAGSLFKGFEKVVVTSAPKISSVFQSLLDTVAPVFESIERSVNKFGDGLSRVYDEHVVPAINSIANAFNGLIDIIQILWENSWQPFAEFLSGVFGVSIEGISDLLGGGLLATLGLLADAIKLVADGFAVFSDWCKENKEPILALITAWQTINFLSWAEQAGGLAGAFELLSGKVSFIVSGIKNLGLALKALTFDKLVSFGETIYLNALYAKDFVVNSGKTIAQLGKTALELGKSALAWTAHTAKMGLATAAEFAHSVAAGVATAATWAFNAALAVLTSPITLVIAAIAALIAIGVLLYQNWDTVVEFAKTAWQGLCDFISGICQAIGEFFSGLWTKLQEIFEPIGQWFGEKFQQGWDAISNTFSKLGSWFGDRWNESKDALAEANTWLGDKFKSGRDKVNSAFEKVGSWFGDRWNDIKDGVKEADTWFGEKFESAKKKTQNPFQKIGSWFGDRWKNMQDALKEIPNWFKNLFNDAMDNAKNIVKSGIDKLKSFFNFDWSLPKIKLPHFNISGSFSLMPPRIPSFSVDWYARGGVFNSPSIIGVGEAGQEAVMPLERNTGWISILAQKLAERMPANNVPTGYSLPAGDIVIQIAGHEFGRVAIQEINKEHERAGQTLLKI*	hallmark_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0003	shell	direct	high	3021	0.998	GCA_002087075.1_02090
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	4797	5360	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	4798	5361	GCA_002087075_1_57_4	GCA_002087075_1_57_4	-	30959	.	PFAM:PF04582.11	tail-length-tape-measure-protein	MATLDELKVMIDAEIAPFRKKMKEVENQVKGTSDQVKNATAKIREQSSSIGSAFGKLAKFAGFAILGKKLLDVGMYSTQTALEVSAAMNQIKRQMGESSQSFLKWVNDNANAMNMGVGEATNYGAVYSNLFSGFIKDTNKLSAYTAKMLQTSAVVAEGSGRTITDVMERIRSGLLGNTEAIDFCRTA*	phrogs_hmm	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0004	shell	direct	high	563	0.998	GCA_002087075.1_02091
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	5347	5697	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	5348	5698	GCA_002087075_1_57_5	GCA_002087075_1_57_5	-	30959	.	.	hypothetical protein	MFLDIGGKPLDFWDLTVLEIREMIESYNRVKIQERKEKIIDSYRLSQMISNHVSLLLSKDAKVFEFWEYAPELFVEEQQAVEQERQRQALLLHKERMRDFADRHNRKRKEEMNGNS*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0005	shell	direct	high	350	0.997	GCA_002087075.1_02092
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	5736	6116	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	5737	6117	GCA_002087075_1_57_6	GCA_002087075_1_57_6	-	30959	.	PFAM:PF12363.7	tail-assembly-chaperone-protein	MALPYSIWKISDEKELKLRLSSHQAAKVEEKIGMNLLKIFMPEAGEEFPLPPLKVVLLLIHGALQKYENGYSLEDVYDLYDEYVDNGGDQTTFMTEVLMPLFEVSGFTPRGSKGKKTSKKKMTVVE*	hallmark_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0006	shell	direct	high	380	0.997	GCA_002087075.1_02093
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	6121	6534	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	6122	6535	GCA_002087075_1_57_7	GCA_002087075_1_57_7	-	30959	.	PFAM:PF16463.4	tail-tube-protein	MLANGITLSYSETKGSYTKLVGLKEVPGFGIEPEKVENTTLEDKVKKYEFGIGDAGELEYKFSYNNSSETAPYRVLRKAADDKKKLYFEQAYPDGTKVNFEGQVSVKLGGGGVNAVIEFTLKIALQSELEFTDGLGG*	hallmark_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0007	shell	direct	high	413	0.998	GCA_002087075.1_02094
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	6537	6905	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	6538	6906	GCA_002087075_1_57_8	GCA_002087075_1_57_8	-	30959	.	PFAM:PF05657.10	tail-component	MINIKPVIYKELQKVADNVTDTYPSDWETFPVVIFLEEQNKPGDWFDDQEQKSSIRYKVDIFDDTSTSELAVKINQIFESLGLRRTDCQDVPDPSHLRHKVMRFEGVVDLHSELVFQFRMEN*	hallmark_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0008	shell	direct	high	368	0.997	GCA_002087075.1_02095
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	6902	7417	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	6903	7418	GCA_002087075_1_57_9	GCA_002087075_1_57_9	-	30959	.	PFAM:PF04883.11	putative-tail-component	MSELRGADRLIAKCRRLASKKTGEDIVLRAVHNAAIKVVQADAKRLAPGNNGELRNSIKTRVKMDGDKAIGEVYTNLHYAPYVEFGTGPKGQASHSGISPEVSVTYRSSPWYVHEDQINVGPYHFQKIGEFYKMYGQPAQPYLYPALRDNQERVSKNISDYVRRKIREQIK*	hallmark_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0009	shell	direct	high	515	0.998	GCA_002087075.1_02096
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	7392	7730	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	7393	7731	GCA_002087075_1_57_10	GCA_002087075_1_57_10	-	30959	.	PDB:2KX4_A	head-closure-knob	MFLKQSRLKPYPMRRFEKTVTEEGVVKEGYAKEAETVRLELWPASSKLQSEMYGERVNDILNANANKSATIKVKDGVCIDSPTEVTHRVISKKVYTYHQVLELERVRATRGR*	hallmark_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0010	shell	direct	high	338	0.997	GCA_002087075.1_02097
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	7711	8022	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	7712	8023	GCA_002087075_1_57_11	GCA_002087075_1_57_11	-	30959	.	PFAM:PF05135.12	head-tail-adaptor	MSIELLKKMTGEEDTQLLMLLQTRATNLILSETNRTSLTPALSRLIPEVAIELHNRSGAEGEHSRTEGGIAVVYGENGLSTGLLQRIRMHRLARVAGHVFEAE*	phrogs_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0011	shell	direct	high	311	0.997	GCA_002087075.1_02098
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	8024	8212	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	8025	8213	GCA_002087075_1_57_12	GCA_002087075_1_57_12	-	30959	.	.	hypothetical protein	MKFKVKQDFYDWELNVKRLAGEELEITEERYAELADNFASNGVAISDVLEEILPEPEFLEED*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0012	shell	direct	high	188	0.995	GCA_002087075.1_02099
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	8202	8384	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	8203	8385	GCA_002087075_1_57_13	GCA_002087075_1_57_13	-	30959	.	PFAM:PF09124.9	endonuclease-VII	MSLLLRRHYIQEEQAGQYSDLENKTLEELKNLAKEAGITGAYKLSKAEIVEVLEDLKSEI*	phrogs_hmm	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0013	shell	direct	high	182	0.995	GCA_002087075.1_02100
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	8396	9238	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	8397	9239	GCA_002087075_1_57_14	GCA_002087075_1_57_14	-	30959	.	PDB:4AN5_F	Major-Capsid-protein	MTAGQTKLATMVNPEVMADMVSAKLPKLIKFTPLAYVETALQGQPGNTLTVPAWEYAGDATEVGEGQAISPDKLTTKKTTMTIKKAAKGYEITDEALLSGLGDPLGQATYQLGLAIANKIDDDLVAVAKTATQHVAETPTTLEAIDKALDIFEDEEDAQYVAIINPKDATKLKTDVAKEWTKGSELGANMVVSGTFGEVAGVQIVRSKKVEEGKGFLVKVSPSQTQTDDANKYGAFVIMLKRDVAIETDRDILKKTTVITGDKHYGVYLYDPTRVVKFGE*	hallmark_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0014	shell	direct	high	842	0.999	GCA_002087075.1_02101
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	9244	9813	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	9245	9814	GCA_002087075_1_57_15	GCA_002087075_1_57_15	-	30959	.	PDB:6B0X_d	capsid-scaffolding-protein	MNEETQTVETVEEQKVPAEPAQQPQDEKKYTDADVDAIIDKKFAKWKSEQEAKENEAKKLAKMNADEKQKYQLDQREQELADREKAIARKELTAEAKAMLSERDLPVELVNVVDLTSAETVSQSVAVLQKSWEQAVQKGVQEKLKGGAPMKQAPVDSDGVTKEEFARMGYQSRNELYQKNPELYKKLKG*	hallmark_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0015	shell	direct	high	569	0.998	GCA_002087075.1_02102
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	10103	11599	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	10104	11600	GCA_002087075_1_57_16	GCA_002087075_1_57_16	-	30959	.	PFAM:PF06152.10	minor-capsid-protein	MDKAEKQADQFDKVYQEAKTYLDKEVNKIFDKFQRDYGLSQVDARQVLKNMKDKKNLNELRKVLEARPNAPNIQRLLADLDSPAYSFRMKRLERLSDDLDRMRESIYHSEKTGSDAFYSDLMKDSYYKATFDLQQQTGLAYGFSGLPESEIKHLQSFSWVGDGSTYSTNIWKNTGKLTSSIKDELLMSLMTGRGTRETAQAIAERFDVGQNDARRLVRTESAFFHNQMELLSYEEADIEKYIFVAVLDKRTSHICQEHDNKVYDRDKATPGVNCPPMHPWCRSTTVAYDEDADYSKLKRRARNPETGKTELVPADMTYKEWYSKYVAKDVKNEIQDYKKSDQTVSRYNTQKLFSDVSNAWDEIGKGGLSKEQLVGLLKSEYELGNFSSDITKLIGVSSAYIDVSSLATSLVRHGQQYSLDEFMLIKEAVQKPYLILDNSERVEKSIISYVKIPNKDKVIMEAVMVPRDEMLVIHFNKVGIRQVKKNGKNMLTLYKKEK*	hallmark_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0016	shell	direct	high	1496	0.999	GCA_002087075.1_02104
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	11562	11999	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	11563	12000	GCA_002087075_1_57_17	GCA_002087075_1_57_17	-	30959	.	PDB:5A20_A	Portal-Protein	MGLEMITKTKEANYKRGLRQRIAIFAHYLGMKQIALESHSIVPQFSRGLPKNLLEISQIVNNLEGKVTNRQLISLLPFVEDPDAELEALEEEKKKNMEDMSMFNKDNTKPEDEVEDEESGVLGEEESQSDLPADGQGRKAGRPVR*	hallmark_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0017	shell	direct	high	437	0.998	GCA_002087075.1_02105
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	12229	12762	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	12230	12763	GCA_002087075_1_57_18	GCA_002087075_1_57_18	-	30959	.	PFAM:PF05551.10	homing-endonuclease	MIKDKMHKHLNQVYYSMLARCYDEKHWAYKWYGKRGIGVSDEFSDVAKFRSWAMQNGVEFGLQLDRIDNDKDYSPSNCRWVPEHTNKRNRSDNVKYKGYILRDYLKKLSEENNISFSTLVYRYYRSIKRDDIIVNDETIDDILLNYKKYDLRQFSKGVDMSGKTIVRDEKGRFVTYY*	common_virus_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0018	shell	direct	high	533	0.998	GCA_002087075.1_02106
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	12891	13910	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	12892	13911	GCA_002087075_1_57_19	GCA_002087075_1_57_19	-	30959	.	PDB:5A20_A	Portal-Protein	MYQYLTYPRDGYDEGSLKKDLIYKLITMHNTESSHLKKLKSYYLGEHAILEHTRRNVNAPNYKTVANHAKDIADTATGYFMGNPIKYNNTADGDIDELLTAFDGAEIDQVDAQNALNMAIYGRAYEYIYAKEGMAELDSTSIDPENTFMVYDDSIERKPLFAVYYYEVKDDTKDTTKYQAEVFTENLHYHMVLRSTDSGTTQNEQVTPHNLGQIPIIEYRNNHFAIGDYEQQISLIDAYNSLMGNRVNDKEQAVESILVLYGTQLADTPEDAKVAMKILSEEGLLELPGDSARAEFLKNTLDESATEILRTALKEDIYTFSHVPNLTDENFAGNTSGVK*	hallmark_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0019	shell	direct	high	1019	0.999	GCA_002087075.1_02107
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	13922	15136	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	13923	15137	GCA_002087075_1_57_20	GCA_002087075_1_57_20	-	30959	.	PDB:5OEA_B	Large-Terminase	MTNKFTKRQEEVLTRVLNDDFFICGLHGAKRSGKTVLNNMVFMNEIARVRETADRLNIDEPMYILAGTSSTSIQNNIIQELYNMFDIEPKYDKHGAFTLCGVKVVQVYTGSISGLKRARGFTAFGAYVNEASLANEQVFKEIISRCSGEGARIVWDSNPDIPTHWLRRDYINSGDDMIIDFHFKLDDNTFMSDRYRENIKNATPAGVFYDRDILGLWVTGEGVVYRDFSENMVVDNVPEDITKVYAGVDWGYEHFGSIVVIGETSGGSAYLLEEHAHQYKEIDFWVDLAKNIKERYGNITFWADSARPEHVARFQREQLRTFNANKAVLSGIEEVAKLMKAGRFFVVSNKVSKFKDEVYQYIWNEKTGEPVKENDDVLDAVRYAIYSQHSQPKATVRRRSDYGL*	hallmark_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0020	shell	direct	high	1214	0.999	GCA_002087075.1_02108
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	15126	15653	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	15127	15654	GCA_002087075_1_57_21	GCA_002087075_1_57_21	-	30959	.	PFAM:PF03592.15	Terminase-small-subunit	MWLFLIIRKVVMDIGLNQRQKMFASEYLRTGNVYQSAIFAGYSEAYAKTTASKLLENASVKTFIQTETEKMHDENILSAKEALSILSDIARGQRLEEVLMMNPVTGEVDRVTKKADNNTVIKAIAEILKRYPTAKQAEKLELEIEKLKSQIGVDNEQDDKLIDFAKALRGAFDDK*	hallmark_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0021	shell	direct	moderate	495	0.938	GCA_002087075.1_02109
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	16110	16556	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	16111	16557	GCA_002087075_1_57_22	GCA_002087075_1_57_22	-	30959	.	TIGR01637	phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MRLLKSVDVQFTKKNVYDVLESYRSYVRMAGAEYLPKITTTYSFEPKTFTGKNTATENMVIEHVDAEAEVLEIERAVNCIMDPYVRQVIAKKYMDMKIQLSDKAIYMDLGYSESEFYRMLSRGALEFAEAYRKGKLIVYRKILGDICK*	mmseqs_cdd	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0022	shell	direct	high	446	0.998	GCA_002087075.1_02110
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	16686	16901	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	16687	16902	GCA_002087075_1_57_23	GCA_002087075_1_57_23	+	30959	.	PFAM:PF04014.17	transcriptional-regulator	MNTVKTRKVGNSVTVTIPKTLNVPEGQEMFVYKGVDNVIVLAPKIPDPFNGDADLRMEDDFEGVRFLDSEI*	phrogs_hmm	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0023	shell	direct	high	215	0.995	GCA_002087075.1_02111
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	16885	17238	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	16886	17239	GCA_002087075_1_57_24	GCA_002087075_1_57_24	+	30959	.	COG2337	mRNA-degrading endonuclease, toxin component of the MazEF toxin-antitoxin module [Defense mechanisms]. 	MTAKYDYIPEKQDIIWIDFDPSVGREIQKRRPAIVVSRREYSERTGFVAVCPITHGQSRLEEQGLLVPVRSNKVDGSVNPLQLYTFDFRERKAQKITTMDTTSFQKVVQLYNFIFEA*	mmseqs_cdd	nonviral_gene	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0024	shell	direct	high	353	0.997	GCA_002087075.1_02112
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	17259	17495	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	17260	17496	GCA_002087075_1_57_25	GCA_002087075_1_57_25	-	30959	.	PFAM:PF11753.7	nucelotide-kinase	MNPEIIDNINKPSHYQGANGLEAIDVVHNFVGSLSGASAFFWGNAIKYMLRFQKKNGLEDLKKARKNLDWLIEELEKN*	common_virus_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0025	shell	direct	high	236	0.996	GCA_002087075.1_02113
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	17492	17914	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	17493	17915	GCA_002087075_1_57_26	GCA_002087075_1_57_26	-	30959	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MTPKFRVWDSVEKKFVEHFFITDNGLICNMEKPTSDSKLLIPIEKSELILMQSTGLKDKNGVEIFEEDVVSRNSGMPSVVKFGKWIYEEDFGYKIKNIGFHLNSSYDDEWFQAMDYEDIRKNYEVIGNIYENPELLEDKE*	mmseqs_cdd	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0026	shell	direct	high	422	0.998	GCA_002087075.1_02114
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	17911	18402	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	17912	18403	GCA_002087075_1_57_27	GCA_002087075_1_57_27	-	30959	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MNILEKVKQWFIDRDLENGGRLDKQSLKLSEEFGELCAGYLKKNEKLTKDSIGDCAVVIVGLGLLSKVDLDSIFEESKNVRKNDIMTSFAYANTCISNIQTEQHLKLMTLRIKSLTLLIGHLKSISKSLGYDFEECFELAYQEIKDRKGRWIDGSFVKEEDLA*	phrogs_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0027	shell	direct	high	491	0.998	GCA_002087075.1_02115
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	18399	18659	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	18400	18660	GCA_002087075_1_57_28	GCA_002087075_1_57_28	-	30959	.	pfam07116	Protein of unknown function (DUF1372). This family consists of several Streptococcus bacteriophage sequences and related proteins from Streptococcus species. Members of this family are typically around 100 residues in length and their function is unknown.	MKRFIAIWILVSAGLNIWQMDRIRDLEEKKPLVIYKADNAGAEIFGKVVEKGRHGKLYTLTIRDYGIFVVTKDVYEKIRVGDEVLL*	mmseqs_cdd	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0028	persistent	direct	high	260	0.996	GCA_002087075.1_02116
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	18656	19132	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	18657	19133	GCA_002087075_1_57_29	GCA_002087075_1_57_29	-	30959	.	pfam08241	Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	MGDIRILDACCGSRMFWFDKNESHTTFMDIRQEKFEIHGKKVNVNPDVVGDFRDMPFDDETFNLVVFDPPHLKWVGQNSIMRSQYGELDKVTWPEDLAKGFEECMRVLKVGGTLVFKWSDCQINVKEVLKSVPFKPLFGQQRGTTHWMTFMKFEEVTD*	mmseqs_cdd	nonviral_gene	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0029	shell	direct	high	476	0.998	GCA_002087075.1_02117
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	19132	19614	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	19133	19615	GCA_002087075_1_57_30	GCA_002087075_1_57_30	-	30959	.	pfam07852	Protein of unknown function (DUF1642). The sequences making up this family are derived from various hypothetical phage and prophage proteins. The region in question is approximately 140 amino acids long.	MKVQRLIEKYKKLEGVWNAEGAELARQIFLQDLEQLDKPQPVKVKKFVAEWIEEARKACKVAELFEFDFTNDEVRKWFMQERPFDLVARAWLDGYEVEEEKRYIVSLNNGQPLTKTQSGKVLYFNQNIITGNYKFTRKELEEAGFGWVFDCEGVEVEEVE*	mmseqs_cdd	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0030	shell	direct	high	482	0.998	GCA_002087075.1_02118
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	19592	19795	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	19593	19796	GCA_002087075_1_57_31	GCA_002087075_1_57_31	-	30959	.	.	hypothetical protein	MKYDKQVVIEGLKRTIEQNEEKIIEYSKPCDARKRRIRALERDLLKKKNKELRKKVEELEDESTAIN*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0031	shell	direct	high	203	0.995	GCA_002087075.1_02119
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	19782	19949	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	19783	19950	GCA_002087075_1_57_32	GCA_002087075_1_57_32	-	30959	.	.	hypothetical protein	MIGVTYQEIHLFVEFLKKQYGQGRPDYIEALNDLDGMVEVSYREAIERFLDDEVR*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0032	persistent	direct	high	167	0.994	GCA_002087075.1_02120
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	19965	20390	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	19966	20391	GCA_002087075_1_57_33	GCA_002087075_1_57_33	-	30959	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MQERLILKFELNRKQMINSNDRPHFHQKAKTTKFLRQLAEYEGKNVLRDYFGLPYSEDKPCKVKVRIYPPTNRKYDPPNWSPTSKALFDGLTDAKIWTDDNYNVIVSTEFMHGGKSGNKNYRIELEIYEYHEILQRIVDGI*	common_virus_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0033	shell	direct	high	425	0.998	GCA_002087075.1_02121
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	20368	20667	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	20369	20668	GCA_002087075_1_57_34	GCA_002087075_1_57_34	-	30959	.	PFAM:PF10078.8	transcriptional-regulator	MSISEKTLSRWENGESQIKPEKAQQLADYFGVSVGYLLGYESNPLERLKSLVDELKEHKDLLGVLDWYTAFDLANDILAIASVEKARWLGRLNAGEIDS*	phrogs_hmm	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0034	shell	direct	high	299	0.997	GCA_002087075.1_02122
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	20743	21165	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	20744	21166	GCA_002087075_1_57_35	GCA_002087075_1_57_35	-	30959	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MINNVVLVGRLTRDADLKYTQSNIAVATFTLAVNRTFKSENGEREADFINCVMWRKQAENLANWAKKGALIGITGRIQTRTYDNQQGQRVYVTEVVAENFQLMEFKKDGSQPVVDNHDQQAPNFARNSNPMDISDDDLPF*	common_virus_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0035	shell	direct	high	422	0.998	GCA_002087075.1_02123
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	21155	21331	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	21156	21332	GCA_002087075_1_57_36	GCA_002087075_1_57_36	-	30959	.	.	hypothetical protein	MRCFYVSGKIADLDLGSEINAENSFMAAIEFVKRYTSLLKFGSNEIKVSEVEEVQNDK*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0036	shell	direct	high	176	0.994	GCA_002087075.1_02124
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	21353	22342	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	21354	22343	GCA_002087075_1_57_37	GCA_002087075_1_57_37	-	30959	.	pfam07083	Protein of unknown function (DUF1351). This family consists of several bacterial and phage proteins of around 230 residues in length. The function of this family is unknown.	MVKDVTNSLTEIKVDFQPAVINVDYDSVEKQLAAIVAQYTDYEVTASTYKIDYDERTRLNKLKEALETRRKEIKNNINNPYKEFEKWYKKTVEPLDNVISNITAGLNVIDEHERLMRVDVVRAIFEDKCMVAGIEKSTFADKYDEYSLKKYFKTGKYELKKTTLDEMDALVLSEFDALEEYKANKQAIQEQAQEYDLPADSYIRHLEDGKSLVGVFKMMKTDRDAEIARKEQKEAQEKAEAERLAEIEQLAKENANAHIKAYDAETGEILEQGIITPEPQNNAREVAKFEPSEPLTIDLRLTLHGGLEQWENTQEYFEDNFIGFESLED*	mmseqs_cdd	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0037	shell	direct	high	989	0.999	GCA_002087075.1_02125
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	22346	23038	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	22347	23039	GCA_002087075_1_57_38	GCA_002087075_1_57_38	-	30959	.	pfam04404	ERF superfamily. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to ERF.	MASLTFPELQQKMQLEKKKSKDVKYAFRNAEDIYTTFKELKSDWSVIVTDELVELVGKIFVKATAVAFNDERDERYQSTAYAEMSPVPVFNTQKGQIKQMQDPQWTGAVSSYARKYALQGLFAIGEKDIDEYPVEESQEQGQNNQQQKPNNQQAQEQNQVRYIDNIQYQEIIKNVEEIATIKGAPFDTVANFVLNKYQIDDFHKVPVDGYNIVIDYLTKQIQKAYEKQGV*	mmseqs_cdd	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0038	shell	direct	high	692	0.999	GCA_002087075.1_02126
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	23026	23214	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	23027	23215	GCA_002087075_1_57_39	GCA_002087075_1_57_39	-	30959	.	.	hypothetical protein	MIQELHEEIDKWRAKYMHLGIELGEIINDQQDIILKLQNENRHLKRENWNLKKTKGRKKWQV*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0039	shell	direct	high	188	0.995	GCA_002087075.1_02127
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	23479	23826	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	23480	23827	GCA_002087075_1_57_40	GCA_002087075_1_57_40	-	30959	.	.	hypothetical protein	MFEPPLVSQLLGTGAVILGFIGAGLLAHQMDKQEEEKIRQKEEERREEQEFASMIIQGYNQAYERGREAQRQEIRKNIRREFKGFTYDNEPPQGLRPEPLALPEPRRSRYEKYLG*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0040	shell	direct	high	347	0.997	GCA_002087075.1_02129
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	23826	24083	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	23827	24084	GCA_002087075_1_57_41	GCA_002087075_1_57_41	-	30959	.	.	hypothetical protein	MINKDQIIKAQQEKIERIEQLQKKLHKLSTLGLLTTKLLGLPNELEKPLKVTHDISHVIKDVLDGMSPSEAIKQNMAEEDDEEEE*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0041	shell	direct	high	257	0.996	GCA_002087075.1_02130
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	24171	24437	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	24172	24438	GCA_002087075_1_57_42	GCA_002087075_1_57_42	-	30959	.	.	hypothetical protein	METVQIVRIKDVIIEKISANDEELEHIFGCSKRQAGDMRREMKKLPSQQKYLRNDGQLVTIKGFDAYLQYRGSQSWKKEMSKTVKMTR*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0042	shell	direct	high	266	0.996	GCA_002087075.1_02131
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	24556	24795	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	24557	24796	GCA_002087075_1_57_43	GCA_002087075_1_57_43	+	30959	.	.	hypothetical protein	MTEIHACLCGNWVNLSADDDCVMGPNMASPYIWWEENAELYSPISKPEANSMYHQDYIYIHYRGADYRIHPMFIQIVSR*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0043	shell	direct	high	239	0.996	GCA_002087075.1_02132
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	24788	24958	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	24789	24959	GCA_002087075_1_57_44	GCA_002087075_1_57_44	-	30959	.	.	hypothetical protein	MKEAVKEFLKFRSRFTKIEWFEINQAIEARLNQKADQLKLDDLDLEIISSRLEKVI*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0044	shell	direct	high	170	0.994	GCA_002087075.1_02133
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	24955	25098	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	24956	25099	GCA_002087075_1_57_45	GCA_002087075_1_57_45	-	30959	.	.	hypothetical protein	MEDKIIELADYFISENTTYREAKIACEKLFRQVSHEIELRAMESRTV*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0045	shell	ambiguous	low	5	0.035	GCA_002087075.1_02133
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	25215	25382	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	25216	25383	GCA_002087075_1_57_46	GCA_002087075_1_57_46	+	30959	.	pfam14168	YjzC-like protein. The YjzC-like protein family includes the B. subtilis YjzC protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length.	MANTPIKPGTDNQKPGRYVEVGPRGGKVTNGHTATIGKGDRLPPTSAKGNGWKKV*	mmseqs_cdd	nonviral_gene	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0046	shell	direct	high	167	0.994	GCA_002087075.1_02134
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	25379	25522	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	25380	25523	GCA_002087075_1_57_47	GCA_002087075_1_57_47	-	30959	.	.	hypothetical protein	MIHHYITHYASNGKDYAEAWIQIDFLGMCFCVWKKRTTIERLYANED*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0047	shell	direct	high	143	0.993	GCA_002087075.1_02135
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	25537	25662	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	25538	25663	GCA_002087075_1_57_48	GCA_002087075_1_57_48	-	30959	.	.	hypothetical protein	MRPRRYPYSGKRKKPINFQIDLEKFKRLSYEAIHDTSQVTQ*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0048	shell	direct	high	125	0.992	GCA_002087075.1_02136
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	25674	25892	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	25675	25893	GCA_002087075_1_57_49	GCA_002087075_1_57_49	-	30959	.	.	hypothetical protein	MRSNLAMTQSLDAPCQQVTIKERQQIIEQFEEKHYGLSSLLKERLLITSDYQFTRKMNELRAFARNGGIYTS*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0049	shell	direct	high	218	0.995	GCA_002087075.1_02137
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	25831	26685	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	25832	26686	GCA_002087075_1_57_50	GCA_002087075_1_57_50	-	30959	.	PDB:4M4W_K	Replicative-helicase	MRAVSRDELQGRFLQIETLNTQCPKHEGVYMWRSVNPCTQNVLTYCPECGQEKIHSQAGEQLAQAEAQIRNTRSYSLFAKESIIPPDLKNATIGSFEIHTDQDAEAVNFAKRVTVDYVKERYEGNTIISGPPGVGKSHLAIGIAKTLNESFQKFQLKRSVVYIPSMELFSRMKDAFRYKDSKWEERRTIQFLQKVDYLILDDLGKESSVGDEIKQGNNWMQKVLYQILENRTNTIITTNYGGNHLEKLYEKSLVDRITKGNMKTNAFKFSNDTESRRTLSASDY*	rep_hall_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0050	shell	direct	high	854	0.999	GCA_002087075.1_02138
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	26695	27537	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	26696	27538	GCA_002087075_1_57_51	GCA_002087075_1_57_51	-	30959	.	PFAM:PF09681.9	phage-replisome-organiser	MVIQKDDIEDFLDFIKIPVVLIKDKAFSELSMEAKVLYSIMKDRLKLSLKNNWIDEKGAYIHLSIEELQKDYFVQLSKPTIIKRKKELVDFGLIELKKQFNKSDKIYVNRLSSYISKNSLPTEVKNFDHISKNSLPTEVKNFDSNQSYINQSYINRITEPDGAGANNLYSIEDAPENDLGIVHDWIFSEFGRYPTPFEIEDLKYFLQDHSKEVIKLAIKECVGNGKPYFKYLESILRDWKQKGLVTAELVENRQRPKRSSGKPSSELRLSDDGYNPRLGF*	rep_hall_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0051	shell	direct	high	842	0.999	GCA_002087075.1_02139
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	27577	27789	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	27578	27790	GCA_002087075_1_57_52	GCA_002087075_1_57_52	-	30959	.	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain  [Transcription]. 	MQKISLKMARIKTGMTQEEIAKKLGVSRNTYMDYERYDTPMRITTAIDFCRIVDIPLDEIFFEKNYTSSV*	mmseqs_cdd	nonviral_gene	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0052	shell	direct	high	212	0.995	GCA_002087075.1_02140
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	27802	28020	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	27803	28021	GCA_002087075_1_57_53	GCA_002087075_1_57_53	-	30959	.	PFAM:PF13744.5	transcriptional-repressor	MLEKHNIWCFLMWDKIEKQLKIKGWSMYRLAKESGVHPSNFSNLKAGRMKEMSWTNMCKIADALEVSLDELR*	phrogs_hmm	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0053	shell	direct	moderate	141	0.644	GCA_002087075.1_02141
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	28136	28360	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	28137	28361	GCA_002087075_1_57_54	GCA_002087075_1_57_54	+	30959	.	.	hypothetical protein	MSKLSHKPNHVVKKLTWENLDNILLSYFSESTTDKPSAVIQLSDFEMSKAEIIEEATAQGYQVIDNSDGYLKFL*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0054	shell	direct	high	224	0.996	GCA_002087075.1_02142
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	28535	29245	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	28536	29246	GCA_002087075_1_57_55	GCA_002087075_1_57_55	+	30959	.	PFAM:PF13643.5	DNA-binding-protein	MSFDLSKLSLGSRFAGNSKAFQCPVCSGFSSHLWTYNPIDINRDYKESIKFIIIAQCQACNQFSIWITNEIQITYGSRIVLNTSDATSTLIFPNVAEGVPKPNNDMPDDVKEIYIEAGEVLNISPRASAALSRLAIEKLVAHLNAQGKDLNTQIGSLVSKGMPIEIQQMLDSVRVIGNNAVHPGQIDIKDNKELALSLLSFINLIVDNRITQPKKILDIYNLLPDSYRNSIERRDN*	phrogs_hmm	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0055	shell	direct	high	710	0.999	GCA_002087075.1_02143
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	29242	29373	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	29243	29374	GCA_002087075_1_57_56	GCA_002087075_1_57_56	-	30959	.	.	hypothetical protein	MESVEIVELIKITFKRGKGTEDDPVRVVTQYWDKENVLIFEKD*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0056	shell	direct	high	131	0.992	GCA_002087075.1_02144
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	29543	29686	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	29544	29687	GCA_002087075_1_57_57	GCA_002087075_1_57_57	-	30959	.	.	hypothetical protein	MMEHIIKSLATKDTTTVILVLGLVNEARLWHKQYLAYKLKDKELKKK*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0057	shell	direct	high	143	0.993	GCA_002087075.1_02145
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	29759	30034	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	29760	30035	GCA_002087075_1_57_58	GCA_002087075_1_57_58	-	30959	.	.	hypothetical protein	MNTLNEKAINIFKAVAKETLIQGTYEENFLYSQLETFCTNCRQFAFGWTELAEEIERQEHYLLDAGFTQEEIDDIRFDAAFAGMLDKMNVA*	.	hypothetical_protein	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0058	shell	direct	high	275	0.996	GCA_002087075.1_02146
GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote	cenote	CDS	30203	30958	GCA_002087075.1	MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075.1_MWSM01000060.1	GCA_002087075.1|MWSM01000060.1	GCA_002087075_1_57	GCA_002087075_1_57@C0	30204	30959	GCA_002087075_1_57_59	GCA_002087075_1_57_59	+	30959	.	PDB:2FJR_A	Repressor-protein-CI	MDSLAQNIKYYRKLSGLTQKELAKKLSVAPTAISAWEVGRNQPLMNNIEQMSAIFGIKKSLLLGEDFSSHVDKATSPIQTIYDELKPPRQAKVLNYAKRQLDEQKNEEETKINEVSEKVIDLYQVEVVSETAAASGFNYGFGYDDTDREIIEVDEQPPHHDIATKVSGDSMQPDYQDGDILYLVDKGLTTYNGDLAVIAYGDRSYFKKIYTENGRLRLVSLNDKYEDITLDFPPAEDTHIKIYAVIGVYRGE	common_virus_hmm	common_virus	C0	30960.0	0	30960	GCA_002087075.1|MWSM01000060.1@region_1_30960@tool_cenote_CDS_0059	.	unmatched_CDS	none	0	0	.
GCA_002087075.1|MWSM01000072.1@region_1_3000@tool_cenote	cenote	CDS	1	2999	GCA_002087075.1	MWSM01000072.1	GCA_002087075.1|MWSM01000072.1	GCA_002087075.1_MWSM01000072.1	GCA_002087075.1|MWSM01000072.1	GCA_002087075_1_68	GCA_002087075_1_68	1	3000	GCA_002087075_1_68_1	GCA_002087075_1_68_1	+	3000	.	PDB:3GUD_A	Neck-appendage-protein	AFDAEFTKREKAITDAIELAKAKAEEVKQEVSDTINQRFNSFHDEPLRESRRKAEEALRQAGASSSLAQEAKRIGLDSVARLEAFKSQTRNAQTALSGDLNLLKQTVTNDISSKQRQLKTDISKQVQALGQIKNDLAGVRSSQARYEETTKGRLTALTNRMEGKANKSEVRQTAETLTSQIDRIQEESSTRISTMTSRFNQRADALDAGVRRLTEGLRTKADISSLNVTAENIRQSVRRLERDTQSQLNQKLSTAEFEVQAGSIRQEILNATKDKADKTLVVTEAGKLREEFSNMQVGGRNYYRDSEKIQQSRFGFVFDNLDPYLSKSDIGTTWTLSFDCKLDEVDGSFPFHMSHGGANGFGIEGRKEFTATREWQRFRLTGPVFFKEDAPSESKLQMTLFNSDLGYGGTIFIRRIKLEKGTLATDWSPALEDTNGLITQAKASFERTAQELRTDLSAVQAYVAQDGQRQKSLQRYTREESARQARAVREQISRDYVGKSSYQEDVEGIHRRIEGVKTSANREITSQIASYRQSADGTFRDISSQITTYKQDMTRNIANLSHQLAGKVETTDFQRVKETSELYERILGNTENGIADKVARMAMTNQLFQVEVGKYSVSGPNLIKNSDFKNDTNKWVSTQNLGRLVKHSFYHNGQKDLMRLSNATKNKNFLSSQRFNLERNTDYVLNFRGFNNSALASYDVYILGRRAGESDVFTIFRKVVSSKKLSTSRCEDVSVTFNSGEMDNAYIRFENNGSSSGTADLYITEVDLYKGYKPRTWQPHPEDAVADANKKLEATQTKMTQLAGSWLVQNINSAGDLISGINLGANGHNRLSGKLTHITGETLIDRAVIKSAMVDKLKTANFESGSVTTAVLAAEAVTADKVKFDHAFIRKLIANDAFIGELTSKRIFATKIESVVNRSIFLEAYQGQIGGFTIGRFAQGRGRWISGVNQFSVGMGNGEGGSYNGENTAFWANWGYSWNSPGPNAWYVTTSGNMYCRNGA	hallmark_hmm	common_virus	NaN	.	0	3000	GCA_002087075.1|MWSM01000072.1@region_1_3000@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.