core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	genomad_gene	genomad_length	genomad_strand	genomad_gc_content	genomad_genetic_code	genomad_rbs_motif	genomad_marker	genomad_evalue	genomad_bitscore	genomad_uscg	genomad_plasmid_hallmark	genomad_virus_hallmark	genomad_taxid	genomad_taxname	genomad_annotation_conjscan	genomad_annotation_amr	genomad_annotation_accessions	genomad_annotation_description	genomad_element_name_std	genomad_element_name_orig	genomad_element_gene_wrt_to_contig	genomad_element_gene_wrt_to_element	genomad_element_gene_start	genomad_element_gene_end	genomad_protein_translation	genomad_phage_region_id	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	genomad	CDS	2362122	2362481	GCA_002096135.1	CP020763.1	GCA_002096135.1|CP020763.1	GCA_002096135.1_CP020763.1	GCA_002096135.1|CP020763.1|provirus_2362122_2372918_2248	360	-1	0.297	11	GGA/GAG/AGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	GCA_002096135.1|CP020763.1	2248	1	1	360	MHKTEFLETFLSLYINHHVVLKDMETDTNKYTVIDVRNAPKKVKKDKIKGSIEIPAKDLHEHLDELSKDKVYVVYDWTGGTILGKQALLELYQNGFEAYELAGALEGWKGMSLPLENVE	GCA_002096135.1|CP020763.1|provirus_2362122_2372918	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad_CDS_0001	persistent	direct	high	360	1.0	GCA_002096135.1_02343
GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	genomad	CDS	2362474	2362992	GCA_002096135.1	CP020763.1	GCA_002096135.1|CP020763.1	GCA_002096135.1_CP020763.1	GCA_002096135.1|CP020763.1|provirus_2362122_2372918_2249	519	-1	0.250	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	GCA_002096135.1|CP020763.1	2249	2	353	871	MNEFYLIDSPTYKKLEWLKKKYFNLDIISVMLFLEINKTYKLMKNNYDSFIEDYGLTEAKFSILMLLLYEQNLTLSPSELSKKIGNKKSTITGIIKGLERQGLVRRVNTSNDKRTSYVQMTELGYSKLNEFLPYNYDFVSNVFSDFDEQEKEMFFHLMNKLRNNIERDGEDA	GCA_002096135.1|CP020763.1|provirus_2362122_2372918	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad_CDS_0002	persistent	direct	high	519	1.0	GCA_002096135.1_02344
GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	genomad	CDS	2364078	2364527	GCA_002096135.1	CP020763.1	GCA_002096135.1|CP020763.1	GCA_002096135.1_CP020763.1	GCA_002096135.1|CP020763.1|provirus_2362122_2372918_2250	450	1	0.327	11	GGAG/GAGG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	GCA_002096135.1|CP020763.1	2250	3	1957	2406	MIFISACLVGQNVRYDGGNKLNNNLKKLVDKGIAKPICPEILGGLSTPRNPAEIVGGDGFDVLENRAKIVDSQGNDVTKEYINGAMKALDTCQKINCETLILKSDSPTCSTENIYTGEFNEEKRRGVGVFSALLIKHGIKVYNEKNYNI	GCA_002096135.1|CP020763.1|provirus_2362122_2372918	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad_CDS_0003	cloud	direct	high	450	1.0	GCA_002096135.1_02345
GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	genomad	CDS	2364737	2364988	GCA_002096135.1	CP020763.1	GCA_002096135.1|CP020763.1	GCA_002096135.1_CP020763.1	GCA_002096135.1|CP020763.1|provirus_2362122_2372918_2251	252	-1	0.250	11	AGGAG	GENOMAD.076030.PP	9.112e-21	87	0	0	0	1	NA	NA	NA	NA	NA	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	GCA_002096135.1|CP020763.1	2251	4	2616	2867	MLNKNVKYPHAKLLFDFAGIISSISILLLIAFNLYLKFESNGIVEIGVKWNESSLYIGLTLLFLIIFCAIISYILKFIKKGLN	GCA_002096135.1|CP020763.1|provirus_2362122_2372918	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad_CDS_0004	shell	direct	high	252	1.0	GCA_002096135.1_02346
GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	genomad	CDS	2365100	2365354	GCA_002096135.1	CP020763.1	GCA_002096135.1|CP020763.1	GCA_002096135.1_CP020763.1	GCA_002096135.1|CP020763.1|provirus_2362122_2372918_2252	255	-1	0.318	11	None	GENOMAD.168355.VP	2.018e-06	46	0	0	1	1246	Caudoviricetes	NA	NA	PF03592;COG3728;K07474	Phage terminase, small subunit	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	GCA_002096135.1|CP020763.1	2252	5	2979	3233	MYNEYVELIEIPIKPSDRLRARDMLGKYHKLFTEKKEFTADTPVIINIGEWDEEDEEDKQRTLDKINDNYPNRTMIVDDIPLED	GCA_002096135.1|CP020763.1|provirus_2362122_2372918	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad_CDS_0005	shell	direct	high	255	1.0	GCA_002096135.1_02347
GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	genomad	CDS	2365937	2366302	GCA_002096135.1	CP020763.1	GCA_002096135.1|CP020763.1	GCA_002096135.1_CP020763.1	GCA_002096135.1|CP020763.1|provirus_2362122_2372918_2253	366	-1	0.342	11	AGGAG	GENOMAD.224181.VP	1.038e-68	227	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	GCA_002096135.1|CP020763.1	2253	6	3816	4181	MDKEQLKQYMYDYVKEHKEIPIYQLEDLFKELDHDYKGKTSVTHDQDKNIVFWSGWNKLTMYALIELVKEEHLDLIYRGNYVMRYLLDGRVPSLPLAITYPEYGQQTEVPSWVPMLLRVTK	GCA_002096135.1|CP020763.1|provirus_2362122_2372918	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad_CDS_0006	shell	direct	high	366	1.0	GCA_002096135.1_02348
GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	genomad	CDS	2366900	2368255	GCA_002096135.1	CP020763.1	GCA_002096135.1|CP020763.1	GCA_002096135.1_CP020763.1	GCA_002096135.1|CP020763.1|provirus_2362122_2372918_2254	1356	-1	0.308	11	AGGAG	GENOMAD.141444.VV	5.607e-13	74	0	0	0	1246	Caudoviricetes	NA	NA	PF01057;PF02257;TIGR01613;COG5545	phage/plasmid primase, P4 family, C-terminal domain	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	GCA_002096135.1|CP020763.1	2254	7	4779	6134	MGIFPDYLEDRSIFDEKEFFDGNRFKFYEFALFLYEEFHGCYIDNRPHVFTGKKYELLNIDVVRKMTIKYIPSLREQQNKEVYQKLKTLCMNNYQEQCSARYIGLKNGIYDTVEEKLKSFSPQYYITNIIDVDFNEQAQSDLIERFIKDISNDDEEVEQLIYEMIGYGLYRDNFLQVAFFYYSPGGNGKTTLLKLLHHFYNPENTTALSFNDLNDKFKPANLQGKLVNIADDIDPNRIKDTGNFKIIVTGNYITLEFKGQDAFEFKPYVKLIFASNELPMSNDKSEGFYRRMVIIPMLRKFGKGGQKKDPMLLNKLITPHNMSALLNLALKGLKRTLENNEIIEPKIARKTKEEYQFDNNPVLQFIEDATDKDYRQLPLAEGRPTNRTYEIYNIWAPNNGYMLLNKSNFSKEMARLGYKTKMKWSREKQRSVRFYYKDTTENYYDFDGQRL	GCA_002096135.1|CP020763.1|provirus_2362122_2372918	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad_CDS_0007	cloud	direct	high	1356	1.0	GCA_002096135.1_02349
GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	genomad	CDS	2368267	2369136	GCA_002096135.1	CP020763.1	GCA_002096135.1|CP020763.1	GCA_002096135.1_CP020763.1	GCA_002096135.1|CP020763.1|provirus_2362122_2372918_2255	870	-1	0.330	11	GGAG/GAGG	GENOMAD.024962.VV	7.068e-18	87	0	0	0	1246	Caudoviricetes	NA	NA	PF08800;PF08708	VirE N-terminal domain; Primase C terminal 1 (PriCT-1)	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	GCA_002096135.1|CP020763.1	2255	8	6146	7015	MNEIKLEYDTQISVVHYESLDSRSFKSFSKPKWSKLINKLSVPIEANYKYARGVAVYGDIKDDSDKKGNKYKKYRKDENVIYRDVLVLDYDDIPKLRLLHDAITDTLKDVSWMYHTTFNHRTESPRIRLYIALSERISADEYRKYTKVLANKIGHPVDEGSFQPSRAMALPVYIKGKYPFLYKYNDAPILDTKTLNQWCDKYREKHKGLTKFKYPKRRDNDFWKSIAFGVSTGNRNQTLTSLIGVLLNRRVPDPLVYAYCYMWNENCKPPLSSREFNATFESIYKREHQ	GCA_002096135.1|CP020763.1|provirus_2362122_2372918	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad_CDS_0008	cloud	direct	high	870	1.0	GCA_002096135.1_02350
GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	genomad	CDS	2369203	2369520	GCA_002096135.1	CP020763.1	GCA_002096135.1|CP020763.1	GCA_002096135.1_CP020763.1	GCA_002096135.1|CP020763.1|provirus_2362122_2372918_2256	318	-1	0.314	11	GGAG/GAGG	GENOMAD.225715.VP	6.525e-34	126	0	0	0	1246	Caudoviricetes	NA	NA	PF07342	NA	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	GCA_002096135.1|CP020763.1	2256	9	7082	7399	MSWEIRNLMCDIEVVKEKLEDVATTHTWFVDERFTKRSLKTKEEVVNYALAYNEHRIHNEQVTELMLTYLKELDGLMNKFHELEKASSENFGEESDDAKKLKITE	GCA_002096135.1|CP020763.1|provirus_2362122_2372918	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad_CDS_0009	cloud	direct	high	318	1.0	GCA_002096135.1_02351
GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	genomad	CDS	2369520	2370077	GCA_002096135.1	CP020763.1	GCA_002096135.1|CP020763.1	GCA_002096135.1_CP020763.1	GCA_002096135.1|CP020763.1|provirus_2362122_2372918_2257	558	-1	0.314	11	AGGAG	GENOMAD.100321.VV	4.421e-101	324	0	0	0	1	NA	NA	NA	PF20188;TIGR00180	ParB/RepB/Spo0J family partition protein	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	GCA_002096135.1|CP020763.1	2257	10	7399	7956	MNNEQKEVIEHVVYQLELSVMNNLESYEHTEYVNGIEVVSEISREKHLELIMKWAVQELEKNFNINEENGKMNNKIETVKINDLKVDYSYRSLDNPSADGIVENFERLAIGYITVSAREDGLYIIDGIRRVEALKHLGYVECPAEVLHGLTVEDEARIFVNMNKFHDEYDEEYEVYPDVEVEDED	GCA_002096135.1|CP020763.1|provirus_2362122_2372918	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad_CDS_0010	cloud	direct	high	558	1.0	GCA_002096135.1_02352
GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	genomad	CDS	2370070	2370216	GCA_002096135.1	CP020763.1	GCA_002096135.1|CP020763.1	GCA_002096135.1_CP020763.1	GCA_002096135.1|CP020763.1|provirus_2362122_2372918_2258	147	-1	0.279	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	GCA_002096135.1|CP020763.1	2258	11	7949	8095	MKLNLLYITLTSLLTILLLAISNMYVAFSVYGMMVTYGFNLTGGLENE	GCA_002096135.1|CP020763.1|provirus_2362122_2372918	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad_CDS_0011	shell	direct	high	147	1.0	GCA_002096135.1_02353
GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	genomad	CDS	2370263	2370523	GCA_002096135.1	CP020763.1	GCA_002096135.1|CP020763.1	GCA_002096135.1_CP020763.1	GCA_002096135.1|CP020763.1|provirus_2362122_2372918_2259	261	-1	0.337	11	GGAG/GAGG	GENOMAD.077846.VV	1.697e-23	95	0	0	0	1246	Caudoviricetes	NA	NA	PF20063;COG3311;TIGR01764	Predicted DNA-binding transcriptional regulator AlpA	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	GCA_002096135.1|CP020763.1	2259	12	8142	8402	MSQLLSEQTSQQLVNSIVDIAEKIALEKVKQSRKRYLIQKEVMEEYNVTHKVITEWEMMGLRKVKIGKTIRYDRQDIENVIEQMKK	GCA_002096135.1|CP020763.1|provirus_2362122_2372918	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad_CDS_0012	cloud	direct	high	261	1.0	GCA_002096135.1_02354
GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	genomad	CDS	2370569	2370796	GCA_002096135.1	CP020763.1	GCA_002096135.1|CP020763.1	GCA_002096135.1_CP020763.1	GCA_002096135.1|CP020763.1|provirus_2362122_2372918_2260	228	-1	0.272	11	AGGAG	GENOMAD.084156.VV	6.947e-20	84	0	0	0	1246	Caudoviricetes	NA	NA	PF08667;TIGR02612;COG3655;K18830	mobile mystery protein A	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	GCA_002096135.1|CP020763.1	2260	13	8448	8675	MFTKKSELKQQFLKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIKIISEFLDIDKEVFFI	GCA_002096135.1|CP020763.1|provirus_2362122_2372918	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad_CDS_0013	cloud	direct	high	228	1.0	GCA_002096135.1_02355
GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	genomad	CDS	2370895	2371698	GCA_002096135.1	CP020763.1	GCA_002096135.1|CP020763.1	GCA_002096135.1_CP020763.1	GCA_002096135.1|CP020763.1|provirus_2362122_2372918_2261	804	1	0.287	11	None	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	GCA_002096135.1|CP020763.1	2261	14	8774	9577	MEGAGQMAELPTHYGTIIKTLRKYMKLTQSKLSERTGFSQNTISNHENGNRNIGVNEIEIYGKGLGIPSYILHRISDEFKEKGYSPTLNDFAKFDKMYSYVNKAYYNDGDIYYSSYDLYDETIKLLELLKESKINVNDIDYDYVLKLYKQILSTDTEKSIINYETLANTRKSSDKKREITIEEIGEFHEKYLKLLFTNLETHNDRKKALAEIEKLKEESIYLGEKLRLAPNHHYDAIKGKPMYKLYLYEYPDRLEHQKKIILEKDTN	GCA_002096135.1|CP020763.1|provirus_2362122_2372918	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad_CDS_0014	cloud	direct	moderate	786	0.978	GCA_002096135.1_02356
GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	genomad	CDS	2371782	2372918	GCA_002096135.1	CP020763.1	GCA_002096135.1|CP020763.1	GCA_002096135.1_CP020763.1	GCA_002096135.1|CP020763.1|provirus_2362122_2372918_2262	1137	1	0.326	11	AGGA	GENOMAD.101485.VV	0.0007541	44	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad	GCA_002096135.1|CP020763.1	2262	15	9661	10797	MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFLNNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVSIKKITVPYCQKVINKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFTHTKAPRKKEAQQDASTKYYSSDELKQFLTFVEDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKNQYVFTTVRDNKPLYPEHCNKALDLICEKNNFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYAHVTEKQRDQVADKFAKYINF	GCA_002096135.1|CP020763.1|provirus_2362122_2372918	GCA_002096135.1|CP020763.1@region_2362122_2372918@tool_genomad_CDS_0015	cloud	direct	high	1137	1.0	GCA_002096135.1_02357