core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	genomad_gene	genomad_length	genomad_strand	genomad_gc_content	genomad_genetic_code	genomad_rbs_motif	genomad_marker	genomad_evalue	genomad_bitscore	genomad_uscg	genomad_plasmid_hallmark	genomad_virus_hallmark	genomad_taxid	genomad_taxname	genomad_annotation_conjscan	genomad_annotation_amr	genomad_annotation_accessions	genomad_annotation_description	genomad_element_name_std	genomad_element_name_orig	genomad_element_gene_wrt_to_contig	genomad_element_gene_wrt_to_element	genomad_element_gene_start	genomad_element_gene_end	genomad_protein_translation	genomad_phage_region_id	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	genomad	CDS	63762	64928	GCA_002096895.1	NCVI01000020.1	GCA_002096895.1|NCVI01000020.1	GCA_002096895.1_NCVI01000020.1	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931_60	1167	-1	0.384	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	GCA_002096895.1|NCVI01000020.1	60	1	1	1167	MKITQHTKKDGSAVYRSSIYLGIDSVTGKKVKTTISARTKKELKNKATQAKVEFEKNGSTRKQRSHITTYSELVDLFWQTYQHTIKTNTQIKIKGCLNNYLLPSFGTYKLDKLTPVIIQTQVNKWADEYNQDGTGYKEYNHLHALNKRILQYGVSIQALDNNPARDVVIPRKITRDKQEIKYFQDQELKNFLSYLDNLENTFINFYDTVLYKTLLATGLRIRECLALEWSDIDLQNGTIDINKTLNILNQVNTPKTKSSYRVLDIDHKTVLMLRLYRARQAENGRNIGLTYEKVFSDSFDNYVNTRKVDYRLHKHLKNANCTDLGFHAFRHTHASILLNAGLPYKEIQTRLGHAKISVTMDTYSHLSKENQKRAVSFFETALEKIKSS	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad_CDS_0001	shell	direct	high	1167	1.0	GCA_002096895.1_00063
GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	genomad	CDS	65218	66114	GCA_002096895.1	NCVI01000020.1	GCA_002096895.1|NCVI01000020.1	GCA_002096895.1_NCVI01000020.1	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931_61	897	-1	0.314	11	AGGA	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	GCA_002096895.1|NCVI01000020.1	61	2	1457	2353	MDDTRKQLLSYQALIDKMVANGILFNIFDQNTAKDILQTRNYYYKISSYRKLFNKIDGKYNIEFATLADLAVIDMQIRYFLMDICLDVEHSIKTALMDVITKNPKVDGYDIVKDYAVYNPIGFTNTKNALSKNHYLKNVYIKHKNDIPIWVLIEVMDFGNLCYLVEMYCDKYPSNKRLKKAKQLGKYARHIRNACAHSNVILVDVLEQTLSPSSSITSLASMLNISRDIIKYRKIHDIFSLVVLHREYCSKALGKQRFKEFIKIAKRAKKHEDYYKQNPKIVEIYINFVKTLVKISKK	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad_CDS_0002	cloud	direct	high	897	1.0	GCA_002096895.1_00064
GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	genomad	CDS	66201	66470	GCA_002096895.1	NCVI01000020.1	GCA_002096895.1|NCVI01000020.1	GCA_002096895.1_NCVI01000020.1	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931_62	270	-1	0.400	11	AGGAG	GENOMAD.154436.VV	2.433e-44	155	0	0	0	1246	Caudoviricetes	NA	NA	PF13783	NA	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	GCA_002096895.1|NCVI01000020.1	62	3	2440	2709	MGFFDTVKQEGSFSTASEVNGLHYVVLQVTLKEKFFGTGSGNLTELEDVINKQASKGYRLHTITTANGGSKGLGGGDRIQATMVFEKIL	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad_CDS_0003	shell	direct	high	270	1.0	GCA_002096895.1_00065
GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	genomad	CDS	66505	66975	GCA_002096895.1	NCVI01000020.1	GCA_002096895.1|NCVI01000020.1	GCA_002096895.1_NCVI01000020.1	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931_63	471	-1	0.321	11	None	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	GCA_002096895.1|NCVI01000020.1	63	4	2744	3214	MKGVKNMNRLKELRQEKKLSQKELAENIGVHYRTLQNWENEESQIKPEKAKQLADFFGVSVAYLLNYSNSKKDPFDGYIPTPREYRSWQEFDYMQLSKTDLDFYDYEKLRKHLDPFALELMLNYFFCTDDERELLRTIAKKFAKKDAVSFKKNNDK	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad_CDS_0004	cloud	direct	moderate	453	0.962	GCA_002096895.1_00066
GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	genomad	CDS	67158	67358	GCA_002096895.1	NCVI01000020.1	GCA_002096895.1|NCVI01000020.1	GCA_002096895.1_NCVI01000020.1	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931_64	201	1	0.348	11	AGGAG	GENOMAD.123425.VV	6.344e-10	55	0	0	0	1246	Caudoviricetes	NA	NA	PF18010;TIGR02612;COG1974;K18830	mobile mystery protein A	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	GCA_002096895.1|NCVI01000020.1	64	5	3397	3597	MSKLKGYRVMLGFTQQQMADKLGISLQSYNNKELGKTPFNDKERLAIKSMVAEIKSDITIDELFYS	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad_CDS_0005	shell	direct	high	201	1.0	GCA_002096895.1_00067
GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	genomad	CDS	67535	68200	GCA_002096895.1	NCVI01000020.1	GCA_002096895.1|NCVI01000020.1	GCA_002096895.1_NCVI01000020.1	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931_65	666	1	0.381	11	None	GENOMAD.205814.VP	1.007e-109	351	0	0	0	1246	Caudoviricetes	NA	NA	COG3646;TIGR02681	Phage regulatory protein Rha	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	GCA_002096895.1|NCVI01000020.1	65	6	3774	4439	MIYFGTVLGGKHEQQEERSEPMELVYMDGKKEPYTTSEIIAECAEIKHRHLKILLNKHREDFESFGKVTFKISPSESGQNVRDYILNEQQATLLITYLRNTEPVKEFKKNLVKAFFEMRNEISKRYLQRELEKPKRKTLTEAIKSWEKAPKHAYSTLTNLLLKGATGKNKAQLMKERESKNGIDGLTSVELKNYQHLEDMAIVMINLNRGYSEIKELIFKV	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad_CDS_0006	shell	direct	moderate	603	0.905	GCA_002096895.1_00068
GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	genomad	CDS	68212	68472	GCA_002096895.1	NCVI01000020.1	GCA_002096895.1|NCVI01000020.1	GCA_002096895.1_NCVI01000020.1	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931_66	261	1	0.372	11	AGGAG	GENOMAD.081064.VV	5.65e-50	171	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	GCA_002096895.1|NCVI01000020.1	66	7	4451	4711	MENDFKTVTNAKGLEIPKYPKDFKKLVEKDRQLAEYLCMNYENLESEDLGAFLETVEQGFSWILDLIDSKDLLYKPQSGSNHAKRK	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad_CDS_0007	shell	direct	high	261	1.0	GCA_002096895.1_00069
GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	genomad	CDS	68811	69011	GCA_002096895.1	NCVI01000020.1	GCA_002096895.1|NCVI01000020.1	GCA_002096895.1_NCVI01000020.1	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931_67	201	1	0.358	11	GGAG/GAGG	GENOMAD.072874.VV	6.738e-31	115	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	GCA_002096895.1|NCVI01000020.1	67	8	5050	5250	MTLNLDNMTQSEFDNRITEIKDRNPNLFQFIIDFLDDKVTPEEVYDFLKMERSYQVNYIKNYQARA	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad_CDS_0008	shell	direct	high	201	1.0	GCA_002096895.1_00070
GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	genomad	CDS	69013	69222	GCA_002096895.1	NCVI01000020.1	GCA_002096895.1|NCVI01000020.1	GCA_002096895.1_NCVI01000020.1	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931_68	210	1	0.414	11	GGAG/GAGG	GENOMAD.068563.VV	1.029e-35	129	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	GCA_002096895.1|NCVI01000020.1	68	9	5252	5461	MNELDLTNTQSIIFVVVMIGLLLYLNYQDRKKSAQIERESIQTIETTSENLSPDYGRYIQLAGVKPWGY	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad_CDS_0009	cloud	direct	high	210	1.0	GCA_002096895.1_00071
GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	genomad	CDS	69176	69496	GCA_002096895.1	NCVI01000020.1	GCA_002096895.1|NCVI01000020.1	GCA_002096895.1_NCVI01000020.1	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931_69	321	1	0.355	11	None	GENOMAD.167683.VP	5.107e-29	112	0	0	0	1246	Caudoviricetes	NA	NA	PF09035;COG3311;TIGR01764	Predicted DNA-binding transcriptional regulator AlpA	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	GCA_002096895.1|NCVI01000020.1	69	10	5415	5735	MGDIFSLQGLSHGGTKMFEKMIEDLKSKILEAVERYLKNHEKVPQKRLDLISKVELKEELGIGDKTLTKWEGAGLPQYIPPIEDTRKAYYKISDVLKFLGVDDGKD	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad_CDS_0010	shell	direct	moderate	273	0.85	GCA_002096895.1_00072
GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	genomad	CDS	69480	70340	GCA_002096895.1	NCVI01000020.1	GCA_002096895.1|NCVI01000020.1	GCA_002096895.1_NCVI01000020.1	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931_70	861	1	0.333	11	None	GENOMAD.189730.VP	6.523e-17	84	0	0	1	1246	Caudoviricetes	NA	NA	PF14297;TIGR01714;K02315	phage replisome organizer, putative, N-terminal region	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	GCA_002096895.1|NCVI01000020.1	70	11	5719	6579	MMAKTKIYFWLKVDKKFFDNLFIKRLKNMPGGYTMTVIYIRLMLESLEDDCILYYEGYFDSLVQELALKLDVSEDDINMTVAYFTKCGLIQIDDDGHATLSQAKAMVESETNWAKYKRDQRKNSQDIPKLENVQSKETFSNSCPTEIEIDKESDKELYKEYILSGKPDFTFPNWLTPRMIEEITKGHPEKYLIRIPLAYLNHTVGKNYKYLDKNLKPIMARFKEGYTLEDFKQVIDIKTAEWKDSPEFSKYLRPETLFGSKFDGYLNQKPKTIKGKSEDNFPDLPF	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad_CDS_0011	shell	direct	high	858	0.997	GCA_002096895.1_00073
GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	genomad	CDS	70352	71197	GCA_002096895.1	NCVI01000020.1	GCA_002096895.1|NCVI01000020.1	GCA_002096895.1_NCVI01000020.1	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931_71	846	1	0.388	11	AGGAG	NA	NA	NA	0	0	0	1	NA	NA	NA	NA	NA	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	GCA_002096895.1|NCVI01000020.1	71	12	6591	7436	MKEQFKEFNNRKISDKVCDIHQVNYWEISVPVLGGSERKVQAFCPECVKGEIKQKEKDLLQQFEDRQAYFKTYDVLMRDSTIPNELKGATFDNFFVKTTEERQMLEFVKGQAQKYLAGMTGNTLISGSTGIGKSHLSLALAKEINESFREKNEPKSVLFVSLTEIIKQIKEGWAYGRNANLTEYEAVKKLVDVDFLIIDDLGAKNGTVTPKSDWEQDFLFDIINNRETTIFNTNLDSSELRTVYNARNSSRILKGLEGNTFKAFTIKDKRYTINTVRGEYQ	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad_CDS_0012	shell	direct	high	846	1.0	GCA_002096895.1_00074
GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	genomad	CDS	71194	71355	GCA_002096895.1	NCVI01000020.1	GCA_002096895.1|NCVI01000020.1	GCA_002096895.1_NCVI01000020.1	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931_72	162	1	0.290	11	GGAG/GAGG	GENOMAD.096366.VV	1.485e-24	96	0	0	0	1246	Caudoviricetes	NA	NA	PF13128	Phage-like element PBSX protein XtrA	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	GCA_002096895.1|NCVI01000020.1	72	13	7433	7594	MNDDKMRFATEKGFVVYEKCGIIEIEKVPSFGEVTLFYSDGKFTHLVKKETKK	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad_CDS_0013	shell	direct	high	162	1.0	GCA_002096895.1_00075
GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	genomad	CDS	71445	71675	GCA_002096895.1	NCVI01000020.1	GCA_002096895.1|NCVI01000020.1	GCA_002096895.1_NCVI01000020.1	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931_73	231	1	0.312	11	AGxAGG/AGGxGG	GENOMAD.110684.VV	4.784e-39	139	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	GCA_002096895.1|NCVI01000020.1	73	14	7684	7914	MSGDTSLGYVVANKFSMDPDKRQKIFSQCKKEDDSLEQRKQEILEKYANKQDKSKSRKNDSKGSESHKRKAKSKEF	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad_CDS_0014	shell	direct	high	231	1.0	GCA_002096895.1_00076
GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	genomad	CDS	71725	72585	GCA_002096895.1	NCVI01000020.1	GCA_002096895.1|NCVI01000020.1	GCA_002096895.1_NCVI01000020.1	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931_74	861	1	0.329	11	AGGAG	GENOMAD.012613.VV	1.456e-23	104	0	0	1	1246	Caudoviricetes	NA	NA	PF05065;TIGR01554;COG4653	phage major capsid protein, HK97 family	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	GCA_002096895.1|NCVI01000020.1	74	15	7964	8824	MTINLAKQKENLEAYIRSTGYNTRGMKVENNHVLIEKPILDSYEDEHQRKELVDLVNIIETRTRGGEYEVTDFESDSLQEVIENSVERTEADKKKTISVDYLVKLFSGKLDFSQEQLDDGQYNLTDFLGKKIIKLKRRTRNREIGKILQTAKVQTATSMDDLKSIVSLINPERNVSMVVSQSLFSVLEKMKDTSGNYLLKVDKETGTSETFFVDNFLIVDDTTLGNKGDQKGFIGDLENFVTLFDRKKDTLSWVNANDYFGKRLILHTRFDVKKVEEDCGYFIQWN	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad_CDS_0015	shell	direct	high	861	1.0	GCA_002096895.1_00077
GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	genomad	CDS	72595	73143	GCA_002096895.1	NCVI01000020.1	GCA_002096895.1|NCVI01000020.1	GCA_002096895.1_NCVI01000020.1	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931_75	549	1	0.333	11	AGGA	GENOMAD.109051.VV	1.18e-105	337	0	0	0	1246	Caudoviricetes	NA	NA	NA	NA	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	GCA_002096895.1|NCVI01000020.1	75	16	8834	9382	MDINQVFETLDDLDNKKSKINSAREQLSEKRKSLLGNQAVSFENIDSFLSNNLESLEQLENMEKAINGLQEKFDSDFSEANAVVFEYIFKETKQRMETKKIYKQYRKKLRRILDAYDEIQELKKDVEEIHTGVVREISQKHSLLLYRTEVSPLTVLPFLNPDSSGWMNFSKEYRDIKEYLEK	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad_CDS_0016	shell	direct	high	549	1.0	GCA_002096895.1_00078
GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	genomad	CDS	73521	73931	GCA_002096895.1	NCVI01000020.1	GCA_002096895.1|NCVI01000020.1	GCA_002096895.1_NCVI01000020.1	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931_76	411	1	0.348	11	GGAGG	GENOMAD.054988.VV	8.831e-78	254	0	0	0	1246	Caudoviricetes	NA	NA	PF05263;TIGR01636	phage transcriptional activator, RinA family	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad	GCA_002096895.1|NCVI01000020.1	76	17	9760	10170	MYELSNRDLDGIDIELGRYRTLANKIYLRRQELIHNKKHSAEDCTGGKGKTVYSPTEATIIRIEEDQTLRYLEGFKLVVDTLMENLIESDLVIFKMRYLEAGATWEDVAEKLNKTTRYINSRRKVIAKRFVELKGY	GCA_002096895.1|NCVI01000020.1|provirus_63762_73931	GCA_002096895.1|NCVI01000020.1@region_63762_73931@tool_genomad_CDS_0017	shell	direct	high	411	1.0	GCA_002096895.1_00079