core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote	cenote	CDS	243580	244467	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C13	1	888	GCA_002754815_1_1_220	GCA_002754815_1_1_220	+	4180106	.	COG0627	S-formylglutathione hydrolase FrmB [Defense mechanisms]. 	MPDHHRRPPGRGLRALLLFAMLLLLAPSAWAGSIVTREFRSEQLGRAWRYNVYLPDGYDGGTLRYPVLYLLHGNGGSLNEWPVKGNLQATADRLIRAGEIPPAVIILPDAGTTWYVDRKEKMESAFFRDLIPDAEKSFRVLDTREGRLIGGLSMGGFGTLRFVMLHPEMFAAAALLSPAIYDPEPPENSSARRVGVFGAEQYDPAVWKSLNWPVLWDGFLEKKIAVPMYINSGDDDDFFIEGEATRLYDRLRRAGQPAQLRIVDGAHVWPVWESTIGDAMRYVFSFASRPVIPAP*	mmseqs_cdd	nonviral_gene	C13	16936.0	243580	260516	GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote_CDS_0001	persistent	direct	high	887	0.999	GCA_002754815.1_00224
GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote	cenote	CDS	244529	244885	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C13	950	1306	GCA_002754815_1_1_221	GCA_002754815_1_1_221	-	4180106	.	COG3502	Uncharacterized conserved protein, DUF952 family [Function unknown]. 	MEQTIYTLVRGEDWRDAEAAGAYHGSADDRRDGFLHFSAAAQLRQSAAKHRAGEADLWMVAVSVPALGDALRWEPAAGGSRPGLFPHLYGPLPLSAVRAAAHVPLDPDGRHIFPEEIP*	mmseqs_cdd	nonviral_gene	C13	16936.0	243580	260516	GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote_CDS_0002	persistent	direct	high	356	0.997	GCA_002754815.1_00225
GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote	cenote	CDS	244911	245477	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C13	1332	1898	GCA_002754815_1_1_222	GCA_002754815_1_1_222	-	4180106	.	COG3773	Cell wall hydrolase CwlJ, involved in spore germination  [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis]. 	MRVEFTRFVPGLPFPMNLPGKAAMPSTDSSSADSRAHDAAILALTLYAEAGDRPLRAIEALAALVMNRHRSGQGHWGQGITGICRAPFQFPCWNTRHPHHARLRAAAPGGVAAHSAQMELCHRVALRALAGALPDPTGGATHMHADDSQPSWSIGRTPVAEIGGLLFYRPEPAEARVRPRGPALALAV*	mmseqs_cdd	nonviral_gene	C13	16936.0	243580	260516	GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote_CDS_0003	persistent	direct	high	566	0.998	GCA_002754815.1_00226
GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote	cenote	CDS	245477	245848	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C13	1898	2269	GCA_002754815_1_1_223	GCA_002754815_1_1_223	-	4180106	.	.	hypothetical protein	MSDQSSPWWVVLASGAISAIGLWLNARGAWLTTRLTSEERQAQERAQVMASLDARQSAWIARQEQELEKMRLRLEALQADCDRAHELARAWHARAHALRHQPDAALPGRESRPSLPGLEEIET*	.	hypothetical_protein	C13	16936.0	243580	260516	GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote_CDS_0004	persistent	direct	high	371	0.997	GCA_002754815.1_00227
GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote	cenote	CDS	245851	246267	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C13	2272	2688	GCA_002754815_1_1_224	GCA_002754815_1_1_224	-	4180106	.	.	hypothetical protein	MPAEPLFRHLGRLLRREPWWAEFWAGAGCLVWTLWTFLAAVEPGARPTFRLATSLPLPLADERFWQASGAVLGLIQVASLLADQRRARRAASFLGSWWWTTLFLALLLADPAAPAMALYAVMAAINLVSLVRLRPELP*	.	hypothetical_protein	C13	16936.0	243580	260516	GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote_CDS_0005	persistent	direct	high	416	0.998	GCA_002754815.1_00228
GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote	cenote	CDS	246560	248047	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C13	2981	4468	GCA_002754815_1_1_225	GCA_002754815_1_1_225	-	4180106	.	PDB:3EZK_A	Terminase	MTTAKTRATRAPEPPGHAPGPDFLEFAWVWNARLGQATPGIHRRIARWFDARRRDGDGRLLLMAFRGCGKSTLVGLWCAWTLLRDPQARILVLAADAALATRMVANVRRILTRHPLCAHLLPDGPGEWAADRFTVRREGALRDPSMLAAGILGNITGSRADVIVCDDVEVAGNCDTPARRAELRERLAETEFVLTPGGTILYVGTPHCAETLYLPPGDERAFLRGYHRLRLPLLDAAGRSAWPERFGMAAVAALRERVGPLHFARQMMLEATEDAAARLDPALLVRYGEETVYAESGGRPVLSLLGRRLVSGGGYWDPAYGRPGSGDASVLAALYADAEGNQYLHRLAYLTHEPGAQPDPATQQCARVAALARDLLLPVVRVETNGIGRFLPALLRREMARAGAACTVVEQSNSRPKRERILGALDPALAARRLHAHDSVFRTGFPAEMAGWRPELANQRDDALDAVAGCLLAEPVRMPGQAAVPRGRGWHGNSA*	hallmark_hmm	common_virus	C13	16936.0	243580	260516	GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote_CDS_0006	persistent	direct	high	1487	0.999	GCA_002754815.1_00229
GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote	cenote	CDS	248010	248324	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C13	4431	4745	GCA_002754815_1_1_226	GCA_002754815_1_1_226	-	4180106	.	.	hypothetical protein	MSSDGILPPEELHAAIRRVVADYGAFVAREPMPGAHEDPKGFAAHHAAAKTALAHLEHLLKLARASLATASAGEDVQTLLTQARAEIAAEGEDDDGQDTGDESA*	.	hypothetical_protein	C13	16936.0	243580	260516	GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote_CDS_0007	persistent	direct	high	314	0.997	GCA_002754815.1_00230
GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote	cenote	CDS	248347	250698	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C13	4768	7119	GCA_002754815_1_1_227	GCA_002754815_1_1_227	-	4180106	.	PFAM:PF03906.13	tail-fibre-protein	MAEHIRIGDVAPRVHYMAAAGQNVFVYPFPIFDTSDLEVRIDGLLVPSGYVVDGADGSSGGTVTFATPPGEGAQVLLRRRLTIARVTDFQPNGLLRAYTLDDELDRQTAALQEVSGDVANAIRLDPGEAAARLHLPLKTARANRVLGFDAVGDLAIFSREDATLSAPFPGGIPRSVEDKLAERLSARDFGATGDGVTDDGAALQAAMNAAAMGGKQLVIGEGSFRTTIPLVLPGGSPGLTMRGAILYDGPAGQVALTLGDGAGARNRSKVYRGLRVLRASIADWSDEADIGLLLRNLDASLVEIQQVEGFTIGTRTSGEATGFEDSTLNLGRFVNNRIGLDIHTGSAAGWNNSIRYLGGHFANASGTHTTLDRYGIRFSCEPGAYNRHNAHLFIGPAFELQRQGTPGTVSAIPFLIQAGDERGILARGVRMEACSPFVARHAGGANDCVYEVCYTGTYGFAGAAVDYTGTATRAGGTAIPLHQAAAAHETPRLVAAAENVRQRAFRQTVDTDGGTGFEQMAVLSGNPNNAAQTLTGLAFAGLGSFTLNADSVGLPTSRALAFVVDCSDCKEFFIAAEGTALRPVVMQFDAGENVLLDTAPVLFSNMNAVWSGSTGSVSRFWEGNVNLDSPVSGLLLNRLQRVTLNAAAKYAAIGVRGGDETAVLKALRLYCPPLHAPTLIYGGSRKWGTREYTVTDTGWTVPSLAAGATTARDVTLPGVRQGDFVQASFAKSSGFQTGGVVFLSGAGGTASINQVRVTAQNISGGTIEVGAGTLYLRAVKPRV*	hallmark_hmm	common_virus	C13	16936.0	243580	260516	GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote_CDS_0008	persistent	direct	high	2351	1.0	GCA_002754815.1_00231
GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote	cenote	CDS	250730	251170	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C13	7151	7591	GCA_002754815_1_1_228	GCA_002754815_1_1_228	-	4180106	.	.	hypothetical protein	MSQLAPVAGLVGTGLSIYSTVHQAQAQSAQVKAQNRQIQQQAAAQSQLAAAQQQQDTRARQDQLAGTLASIRARSAASGLDPNDGSAAAVAAGLQKDSAQDIAEDDAVRNARLAAGRRSLLNNDGSLTTWLRAGSSFAGAAKSLLG*	.	hypothetical_protein	C13	16936.0	243580	260516	GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote_CDS_0009	persistent	direct	high	440	0.998	GCA_002754815.1_00232
GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote	cenote	CDS	251170	253047	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C13	7591	9468	GCA_002754815_1_1_229	GCA_002754815_1_1_229	-	4180106	.	PFAM:PF11134.7	Phage-stabilisation-protein	MPDSRRAKTSFTAGELAPEMLGRGDTRAFDNGARMLRNLILQPTGGVTRRPGLRHVAMLPGAARLVGFEFNTEQTYLLVFLDGRMLVFLGDEQVASASGPWTAAMLPQLAWTQSADTLLLLHPEMVTQRITRTSHTEWTVAEFNFTWMPYHRFAPEAVTLQASALEGQVTVAASAALFVAAHLGKQLRIAGRRLRIRSVTDARHVVADVEDRLTTTDATADWDESAFGAHGWPVSACFHQDRLVLGGSRDLPNRLWMSQSGDLGNFDLGTGLDDEAIEFGLLSDQVNAIRAVFPGRHLQVFTSGGEWMVTGAPLTPASIQILRQTRVGSVTGRMIPPIDVDGSTLFAGRSGTAIYEFAYTTVEDAYQAGDLALTAHHLVQDPLDTAYDQRRRLFHVVMGDGSLATLTLYRAEEITAWTRQETDGAFRAVAELEGAVWFAVERGGTLRLERFDDALCTDAALTGASDTVRTAWHGLEHLEGRDVSVVASGAPAGRFTVLRGAVTLPEATGTVEMGLPFTHRLVPMPVEALNAPGIAGAPQRLVSVTFRLLESKALAVDLGRGAQPVPLRRLDTALLDAPPPAFTGDVTLRALGWRKDALRPLWRIESDEPLPFTLLSVTTNTRTTD*	hallmark_hmm	common_virus	C13	16936.0	243580	260516	GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote_CDS_0010	persistent	direct	high	1877	0.999	GCA_002754815.1_00233
GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote	cenote	CDS	253051	253320	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C13	9472	9741	GCA_002754815_1_1_230	GCA_002754815_1_1_230	-	4180106	.	PDB:5MU4_D	Tail-tube-protein	MERRLHADAPSVTLTYIFRPEEALFPPHFAQALVSRLAAEFCIPLTESTSRAELLQRLAGSDFRDARLADSQQATPRAIEDFPLISVRG*	hallmark_hmm	common_virus	C13	16936.0	243580	260516	GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote_CDS_0011	persistent	direct	high	269	0.996	GCA_002754815.1_00234
GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote	cenote	CDS	253415	254233	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C13	9836	10654	GCA_002754815_1_1_231	GCA_002754815_1_1_231	-	4180106	.	PFAM:PF13340.5	Putative-transposase-of-IS4-5-family-(DUF4096)	MWTPAARAQLARGSQPYATCLTDAEWALVEPFLPSPAKTGRPRSWPMRRVVDAILYVLRTGCAWAHLPRDFPPPGTVHRWFLRLSRRGTFERLAHALIMADRERVGREASPTAAVLDAQSVRSGGVGVKGVRGYDAGKKVTGRKRHALVDTDGRLLLAAISPACLHDSRGGAALLAMSRRPWPFLARCFADRAYAGPRVARASPVAVTIIGSAPGQKGFAVQPRRWVVERSFAWFGRCRRLARDHEATVGSAVAFFTLAAAMILVRRLAQPL*	common_virus_hmm	common_virus	C13	16936.0	243580	260516	GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote_CDS_0012	persistent	direct	high	818	0.999	GCA_002754815.1_00235
GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote	cenote	CDS	254318	254536	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C13	10739	10957	GCA_002754815_1_1_232	GCA_002754815_1_1_232	-	4180106	.	PDB:5MU4_D	Tail-tube-protein	MALSALVLCSRALLRIGAQPIASFGEGTAEAEVAASLYPAARDALLAAHPWSFATGQMVLPRLLDVPVADMT*	hallmark_hmm	common_virus	C13	16936.0	243580	260516	GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote_CDS_0013	persistent	direct	high	218	0.995	GCA_002754815.1_00236
GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote	cenote	CDS	254882	255712	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C13	11303	12133	GCA_002754815_1_1_233	GCA_002754815_1_1_233	-	4180106	.	PDB:7Y23_A	Major-Capsid-Protein	MGQIDAAFVKQFEAEVHEAYQRQGSKLRPTVRSKTGVRGASTVFPRVGKGTAAAKSRAGQVPLMNLDHATVECFLQDYYAGEWIDRLDEVKLSFDEQTVVAHAGAYALGRKTDELIIAALDTAAQTASGTGTGLTDADGLTLAKVLRAFEMLGAADVPDDGQRYAVVGWKQWSQLLQIEEFASSSYIGEADLPWKGTQAKKWLGATWLPHSGLTLDGAVRNCFFYHRTAVGHAVAQEVTTDITWHGDRAAHFVNNMMSQGAVLIDPTGVVRMRAAE*	hallmark_hmm	common_virus	C13	16936.0	243580	260516	GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote_CDS_0014	persistent	direct	high	830	0.999	GCA_002754815.1_00237
GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote	cenote	CDS	256104	256880	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C13	12525	13301	GCA_002754815_1_1_234	GCA_002754815_1_1_234	-	4180106	.	.	hypothetical protein	MTDSLLDAALAPGGDADTPDAAAVPGGAPGSAARPSEVPEKFWDAESGRVRLDSLLKSYRELERKLSQRLARPGPEAPEDEHRRFARLLGAPEAPDGYRIAERHALCCSDPEVNTRLHSAGFTQDQAQLVYDLAAEKLLPVIAEAAAQYEAQRQLDRLREEFGGEERFAQLSRQISAWGRANLPAEVFEALSTTAEGVKALHAMMRKGEPAMARSAEAPEGMDEAGLRRMMRDPRYWRSREPEFVRRVTEGFRRLTGG*	.	hypothetical_protein	C13	16936.0	243580	260516	GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote_CDS_0015	persistent	direct	high	776	0.999	GCA_002754815.1_00238
GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote	cenote	CDS	256889	258385	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C13	13310	14806	GCA_002754815_1_1_235	GCA_002754815_1_1_235	-	4180106	.	CDD:pfam12236	Head-Tail-Connector-protein	MKPEEILQRHARALEARRPWEGVWRECYEHVLATVPGTGGPALFDGTAADAVEQLAASLLAELTPPWSRWFGLAPGRALTGQDGLAAEAQAAAEALEQAADTLQGHLDRSSFALEMHQAFLDLVVAGTGVLLVEEAAPGEASALRFQAVPLRECVLEEGPSGRLETVYRAARLDRAAVAARWPGADLPPAGAGEPDGRLRVVEAVWPDGTGYGFAAVLDGVDGQARMLARGRFARSPFIAFRWMKAPGESYGRGPVMRALPDIRTAKKVVELVLKNASIAATGIWQADDDGVLNPATVRLVPGAIIPKAPGSSGLTPLAAPGNFDVSQLVLSDMRGRIRSALLADRLGPPQDARMTATEVLERSAQAARLLGATYGRLQAELLTPLIARCLSILRRRGEVPPILLDGHEASLSYQSPLARLQGRSDAANMLLFLQAVAALGPEATAQVDRPAAARHLAKILAAPAGILNAATAPSPLPSHPGSDPGAALGPVRAAIEE*	hallmark_hmm	common_virus	C13	16936.0	243580	260516	GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote_CDS_0016	persistent	direct	high	1496	0.999	GCA_002754815.1_00239
GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote	cenote	CDS	258390	258629	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C13	14811	15050	GCA_002754815_1_1_236	GCA_002754815_1_1_236	-	4180106	.	.	hypothetical protein	MGGLFSVPKPVVVATPVLPQQAAADASAGAANAATTEARQDGAERRRRGLAGTIATSERGVLSPLPALPAAARKTLLGE*	.	hypothetical_protein	C13	16936.0	243580	260516	GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote_CDS_0017	persistent	direct	high	239	0.996	GCA_002754815.1_00240
GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote	cenote	CDS	259302	259742	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C13	15723	16163	GCA_002754815_1_1_237	GCA_002754815_1_1_237	-	4180106	.	.	hypothetical protein	MTTAVSDSRIPPRRFSVPKTEPFRHAEEAWFWTMSALIARRDGARIVAGRGQVQRPCEPDDVVKCLDRLYRQRRIDLAHARILRIWGERGQAPDPRSAREKHDHRLWREALERLEWPLRVKGIVAGEAGSPGGGGEVVHLDELSRS*	.	hypothetical_protein	C13	16936.0	243580	260516	GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote_CDS_0018	persistent	direct	high	440	0.998	GCA_002754815.1_00241
GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote	cenote	CDS	259868	260515	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C13	16289	16936	GCA_002754815_1_1_238	GCA_002754815_1_1_238	+	4180106	.	COG2932	Phage repressor protein C, contains Cro/C1-type HTH and peptidase s24 domains [Mobilome: prophages, transposons]. 	MQHYDIWRAIDALAAENGLSASGLARKAGLDPTAFNPSKRTGPDGRARWPSTESVAKVLEATGTSLDAFASLVSGTPMNFRSAAVRPVRRIPLIGLAQAGSAGYFDDGGFPSGAGWDEISVPEIPDPNAYALEISGDSMEPVFRDGDTIIVSPAAPIRRGDRVVVRTRGGEVMAKELLRQSARKIELASLNPAHPNYSFDLAEITWMHRIVWASQ*	mmseqs_cdd	common_virus	C13	16936.0	243580	260516	GCA_002754815.1|CP024588.1@region_243581_260516@tool_cenote_CDS_0019	persistent	direct	high	647	0.998	GCA_002754815.1_00242
GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote	cenote	CDS	580445	581365	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C29	1	921	GCA_002754815_1_1_538	GCA_002754815_1_1_538	-	4180106	.	COG3741	N-formylglutamate amidohydrolase  [Amino acid transport and metabolism]. 	MPRVTFRIAACKKVRMDLPPPENVAPLTEPPFILSRPGHQAIPLVFASPHSGRSYPADLLRSTRLDPLTLRRSEDSFVDQIFAAAPDFGAPLLAATFPRVYCDANREPWELDPGMFDEPLPEWVNTASPRVGAGLGTIARVTGTGENVYDRRLRFTEAMDRVQNLWEPYHGALASLIEETRHRFGFCLLIDCHSMPSSVPAAGRTDMILGDAHGTACSPRATRAVEDGLLSLGYRVRRNDPYAGGYVTRHYGRPRQHVHALQIEISRGLYMDERRITPLPAMETLRQRMTTLLQRLSETDWSFLGR*	mmseqs_cdd	nonviral_gene	C29	18287.0	580445	598732	GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote_CDS_0001	persistent	direct	moderate	876	0.951	GCA_002754815.1_00549
GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote	cenote	CDS	582221	583591	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C29	1777	3147	GCA_002754815_1_1_539	GCA_002754815_1_1_539	+	4180106	.	PFAM:PF13701.5	Transposase-DDE-domain-protein	MKHRPRPPEQADLLRPRLVDMIDGRHELVRLAALIDWSWFEREWAGFFPAAEGRPATHPRLVAGLMYLQHAHGLSDEAVLARWVENPYFQHFTGETFFQHRAPIHPSSLSRWRGRIGEEGVEWLLTRTIEAAQASGAVTSNSLAEIAVDTTVMEKAIAHPTDSRLYERARHSLVTLAHKAGIALRQNYNRLAPRLAGQVGRYAHARQFRRMRKALRTLKGYTGRILRDVERKLGAVPDGPLRARIEQRIALVTRLLLQTPKSSRKLYALHEPEVDCIAKGKARVRYEFGTKVSIATTLAGGFVVGMRSQPGNPYDGHTLADALQQVETLTGQRPSLAVVDRGYRGHGVTATRVLVSGTSRGLTPRLRRLLRRRSAIEPEIGHMKTDGRLARCALKGTLGDALYAVLCGCGHNIRKILAHLRALLAALLAALRQAILTPISQASVPTGRTLLAGATA*	common_virus_hmm	common_virus	C29	18287.0	580445	598732	GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote_CDS_0002	persistent	direct	high	1370	0.999	GCA_002754815.1_00551
GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote	cenote	CDS	584522	585508	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C29	4078	5064	GCA_002754815_1_1_540	GCA_002754815_1_1_540	+	4180106	.	PDB:6R3A_A	Major-Capsid-Protein	MAVTRLSDVVVPETFTSYTVQNTMEKTALLSSGAIVRNSAIDAQLKRGGETFNVPAWNDLGNAEADRSNDDPEVFSTPQKITAFKQRVRKSFLHQSWSSMQFAGELAGSDPLAALQGRVTDYWSRQLQRRVVATLQGILADNLNNDASDMIVDISAMTAEAANFNASAVIDAAATLGDAMDSLSAIFMHSHVYTRALKNDNIEFVTVPSMGKPIPTYRGMVVIVDDGLPNDGTKFTTILAGSGALSYGMTAPNVAKGTEIESVPAAGNGGGMEVLHSRNNCAVHPSGFDWIEGTLADESPSIADLRDGSHWNRVVERKAIPLAFLLSK*	hallmark_hmm	common_virus	C29	18287.0	580445	598732	GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote_CDS_0003	shell	direct	high	986	0.999	GCA_002754815.1_00552
GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote	cenote	CDS	585576	585989	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C29	5132	5545	GCA_002754815_1_1_541	GCA_002754815_1_1_541	+	4180106	.	PDB:3P9A_H	Terminase-small-subunit	MAKDLTHPLRKNPPEDALERISDMAANGWSKAGIARKLGVSVTTFDRWLEEDEELQRAFDMGRDAEHNTLFNALFKAATEKGNATAAMFLLKARHGYREGDQSDIANRVSITFALPGAEKLEAVVKQDKKKIIDHER*	hallmark_hmm	common_virus	C29	18287.0	580445	598732	GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote_CDS_0004	cloud	direct	moderate	233	0.563	GCA_002754815.1_00553
GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote	cenote	CDS	585979	586842	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C29	5535	6398	GCA_002754815_1_1_542	GCA_002754815_1_1_542	+	4180106	.	PDB:5OE8_A	Large-Terminase	MSGEAIELNSFQQRVFAVPEEVDLFLGGGRGGGKSWCIALLILRHVEQYGSKSRILYIRKSYKGLADFENTLREVFGTVYGTAARYNAAEHVWRMPNGAYVELGQLESASDYTKYQGRSFNLLIVDEAGQFADPYLLDMLRSNLRGPKDMPVRMIVAANPAGVGHQWLAKRYVFNGAEPWEVFTEEKSKRLFMHCPSTFAGNVFIDRETYADQLTSSCPDDPELLRAWTDGDWAVSRGAMFATVLDEKRVAIPNFTASDLGADWDSEFYLSHDWGSAAPSVTLLRRP*	hallmark_hmm	common_virus	C29	18287.0	580445	598732	GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote_CDS_0005	shell	direct	high	863	0.999	GCA_002754815.1_00554
GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote	cenote	CDS	586852	588222	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C29	6408	7778	GCA_002754815_1_1_543	GCA_002754815_1_1_543	-	4180106	.	PFAM:PF13701.5	Transposase-DDE-domain-protein	MKHRPRPPEQADLLRPRLVDMIDGRHELVRLAALIDWSWFEREWAGFFPAAEGRPATHPRLVAGLMYLQHAHGLSDEAVLARWVENPYFQHFTGETFFQHRAPIHPSSLSRWRGRIGEEGVEWLLTRTIEAAQASGAVTSNSLAEIAVDTTVMEKAIAHPTDSRLYERARHSLVTLAHKAGIALRQNYNRLAPRLAGQVGRYAHARQFRRMRKALRTLKGYTGRILRDVERKLGAVPDGPLRARIEQRIALVTRLLLQTPKSSRKLYALHEPEVDCIAKGKARVRYEFGTKVSIATTLAGGFVVGMRSQPGNPYDGHTLADALQQVETLTGQRPSLAVVDRGYRGHGVTATRVLVSGTSRGLTPRLRRLLRRRSAIEPEIGHMKTDGRLARCALKGTLGDALYAVLCGCGHNIRKILAHLRALLAALLAALRQAILTPISQASVPTGRTLLAGATA*	common_virus_hmm	common_virus	C29	18287.0	580445	598732	GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote_CDS_0006	persistent	direct	high	1370	0.999	GCA_002754815.1_00555
GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote	cenote	CDS	589384	589605	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C29	8940	9161	GCA_002754815_1_1_544	GCA_002754815_1_1_544	+	4180106	.	PF06806.12	Putative excisionase (DUF1233)	MVPTNADALLVRKDAAAALTEAGYPTSYKTLESMVTRGGGPIYRKFGGRVLYRWADLLDWAEKRMHFPCNKAA*	hhsuite_tools	hypothetical_protein	C29	18287.0	580445	598732	GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote_CDS_0007	.	unmatched_CDS	none	0	0	.
GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote	cenote	CDS	589648	590100	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C29	9204	9656	GCA_002754815_1_1_545	GCA_002754815_1_1_545	+	4180106	.	.	hypothetical protein	MLKKENLMLEYIRSHPKASKRFIYYKDQKPPPGLVGKIPRGWRKTYRGYYLAGQRISTEWYDPEIISAYEKRGSAYYRRFSVIGFGDNIDGIRNTVTGKNIRNFVETLDQHFFECLTFEAWIWKLCAEADNWDTWFDWMTAEWERDYVRK*	.	hypothetical_protein	C29	18287.0	580445	598732	GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote_CDS_0008	cloud	direct	high	452	0.998	GCA_002754815.1_00556
GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote	cenote	CDS	590087	592135	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C29	9643	11691	GCA_002754815_1_1_546	GCA_002754815_1_1_546	+	4180106	.	PDB:1NLF_A	replicative-DNA-helicase	MSASEVPAFLQTPANKFDIAIAQSTLDFFEPNAKWNLRTFDDNKSRNKKNLIRTKSNVRPSDCERELVSLNNSGAGIFFVVNEGGHKDEDITRIRSVFIDIDQVVENERKFFEYFTDIEKIGVVPHLIVRSSPGKFHVYWKVSDLPVADFSAMQQRLAAYFESDPSVTNPSRVMRLPGFAWNKKEPGFFSEVVFKRDGDPPYSADQLRAAFPERQPVAIATGASSLPEGQAAALAPGNVVPFPAPAASPSGVPMVFDATAYAPAGSAGNSTRLAEAEAALWAIPPTKGGFWRHAMIALKGEGESGWPVFDRWSAAANDGSYDQHKNRELWNAATAADGGLNLIFAEAQKRGWTNPNSNAAKPVQQAPQSNAWQPPQPAKAKPKLGITMINSIEQTEVKWLVEGLIPADANIGIVGASSVGKTFVALALGLSAATGHEFMGGEMHCAAPVIYLAGEGKHGIAKRCRAWAAYYGTSLENVPFAVADYLPPMTDEESVAMTIEAVQGIKDHYGHPALIIIDTLNRAFGDEDENSTAGMTKYISGIDRLRAAFPGCSTVTLHHTGHEASGRARGSSAFYAALDTELFIKRSDPWIEIEVTKQKDAAKAPKMKAWLREQDVGEWGSSLVAVRDMSINRETQISMAVSSGISVRQCVENLKREGINVSKNTIMRLRQEYEAQRNLNGV*	rep_hall_hmm	common_virus	C29	18287.0	580445	598732	GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote_CDS_0009	cloud	direct	high	2048	1.0	GCA_002754815.1_00557
GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote	cenote	CDS	592143	592430	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C29	11699	11986	GCA_002754815_1_1_547	GCA_002754815_1_1_547	+	4180106	.	.	hypothetical protein	MLEYKLFPAVGTIVEFEDNLFKCIEVNEGIVGWKTNCECCGSAFVFSMTNGNFRPKKLCQKHNRVEVTSKMFRNAPLNPIIGRQEIRFRNGKRIG*	.	hypothetical_protein	C29	18287.0	580445	598732	GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote_CDS_0010	.	unmatched_CDS	none	0	0	.
GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote	cenote	CDS	592448	592582	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C29	12004	12138	GCA_002754815_1_1_548	GCA_002754815_1_1_548	+	4180106	.	.	hypothetical protein	MADTIEQANARIAELEAEIAAVKGNRDVIRAEKREVVETPFHNG*	.	hypothetical_protein	C29	18287.0	580445	598732	GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote_CDS_0011	persistent	ambiguous	low	12	0.089	GCA_002754815.1_00558
GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote	cenote	CDS	592570	593388	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C29	12126	12944	GCA_002754815_1_1_549	GCA_002754815_1_1_549	-	4180106	.	PFAM:PF13340.5	Putative-transposase-of-IS4-5-family-(DUF4096)	MWTPAARAQLARGSQPYATCLTDAEWALVEPFLPSPAKTGRPRSWPMRRVVDAILYVLRTGCAWAHLPRDFPPPGTVHRWFLRLSRRGTFERLAHALIMADRERVGREASPTAAVLDAQSVRSGGVGVKGVRGYDAGKKVTGRKRHALVDTDGRLLLAAISPACLHDSRGGAALLAMSRRPWPFLARCFADRAYAGPRVARASPVAVTIIGSAPGQKGFAVQPRRWVVERSFAWFGRCRRLARDHEATVGSAVAFFTLAAAMILVRRLAQPL*	common_virus_hmm	common_virus	C29	18287.0	580445	598732	GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote_CDS_0012	persistent	direct	high	818	0.999	GCA_002754815.1_00558
GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote	cenote	CDS	594186	595004	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C29	13742	14560	GCA_002754815_1_1_550	GCA_002754815_1_1_550	-	4180106	.	PFAM:PF13340.5	Putative-transposase-of-IS4-5-family-(DUF4096)	MWTPAARAQLARGSQPYATCLTDAEWALVEPFLPSPAKTGRPRSWPMRRVVDAILYVLRTGCAWAHLPRDFPPPGTVHRWFLRLSRRGTFERLAHALIMADRERVGREASPTAAVLDAQSVRSGGVGVKGVRGYDAGKKVTGRKRHALVDTDGRLLLAAISPACLHDSRGGAALLAMSRRPWPFLARCFADRAYAGPRVARASPVAVTIIGSAPGQKGFAVQPRRWVVERSFAWFGRCRRLARDPEATVGSAVAFFTLAAAMILVRRLAQPL*	common_virus_hmm	common_virus	C29	18287.0	580445	598732	GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote_CDS_0013	persistent	direct	high	818	0.999	GCA_002754815.1_00559
GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote	cenote	CDS	595075	595848	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C29	14631	15404	GCA_002754815_1_1_551	GCA_002754815_1_1_551	-	4180106	.	PDB:1Z19_B	Integrase	MKRGLSRDHSRINANIVPLIGHLKANAVTQKDIREFMTAIMEGKIKKRTKLDKPRAVSNIRGGNGAAARTMSFLGGIFSWAVSEGIRADNPCQGIRKPADGVRQRRLGDKEYAALAHGLTAAALPGGDQKPVPAPALALARFLALTGWRMGEALKLTWGEVDLAKRIATLTDSKTGRSVRPLSEAACKIIAEQPRVEGREIVFMPAKGGEEATMTGFPKALARIVKAGNLPEDITAHVLRHSFASLAADLGYSEPVS*	common_virus_hmm	common_virus	C29	18287.0	580445	598732	GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote_CDS_0014	shell	direct	high	773	0.999	GCA_002754815.1_00560
GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote	cenote	CDS	595845	596663	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C29	15401	16219	GCA_002754815_1_1_552	GCA_002754815_1_1_552	-	4180106	.	PFAM:PF13340.5	Putative-transposase-of-IS4-5-family-(DUF4096)	MWTPAARAQLARGSQPYATCLTDAEWALVEPFLPSPAKTGRPRSWPMRRVVDAILYVLRTGCAWAHLPRDFPPPGTVHRWFLRLSRRGTFERLAHALIMADRERVGREASPTAAVLDAQSVRSGGVGVKGVRGYDAGKKVTGRKRHALVDTDGRLLLAAISPACLHDSRGGAALLAMSRRPWPFLARCFADRAYAGPRVARASPVAVTIIGSAPGQKGFAVQPRRWVVERSFAWFGRCRRLARDHEATVGSAVAFFTLAAAMILVRRLAQPL*	common_virus_hmm	common_virus	C29	18287.0	580445	598732	GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote_CDS_0015	persistent	direct	high	818	0.999	GCA_002754815.1_00561
GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote	cenote	CDS	596717	597127	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C29	16273	16683	GCA_002754815_1_1_553	GCA_002754815_1_1_553	-	4180106	.	PDB:1Z19_B	Integrase	MAAKITLKECRSLGQGEELWDSVVKGFGIRRQQSDAVSFVLLYRTKDGRQRRFTIGRFESPWKPEEARKEAQRLLAEVAKGNDPAEAKQEARSSMSVAELCEAYMKAAEKGLILNRQGQAKKATTLRTRFITAEAG*	common_virus_hmm	common_virus	C29	18287.0	580445	598732	GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote_CDS_0016	shell	direct	high	410	0.998	GCA_002754815.1_00562
GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote	cenote	CDS	597568	598731	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C29	17124	18287	GCA_002754815_1_1_554	GCA_002754815_1_1_554	-	4180106	.	PRK06520	5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase. 	MSASTAAREATRTGADGKPCQPPAFPSFRADHVGSLLRPAALREARQARAEGKLSAEALRQVEDEQIARVVAKQESVGLRAATDGEYRRAYWHYDFLGGLDGIEIYEPEDKVQFKGATLGHKLRVNGRIGWKPSMIEDFRFTAGCTCHAIAKQTIPSPSVVHFRGGREAIARDVYPDMDGFFDDLGRTYEDAVKAFHAAGCRYLQLDEVNIAYLCDPEQIEGLKRRGEHVEGLLDIYAGMINRATRARPPGMAMSMHLCRGNFQSTFVASGGYEPVAEVLFNAIDIDAYFMEFDDERSGGFEPLRFVPRGKKVVVLGIVTSKNGTLESKDELKRRIDEAAKFLPLEQLAISPQCGFASTQEGNKLSEEQQWAKLRLCAELAEEIWGR*	mmseqs_cdd	nonviral_gene	C29	18287.0	580445	598732	GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote_CDS_0017	persistent	direct	high	1163	0.999	GCA_002754815.1_00564
GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote	cenote	CDS	1	863	GCA_002754815.1	CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815.1_CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815_1_3	GCA_002754815_1_3	1	864	GCA_002754815_1_3_1	GCA_002754815_1_3_1	-	9720	.	PDB:1BCO_A	Mu-Transposase	MLVVETVAKIRRLHWVQGKSIKAICRELGISRKVVRKVLRSGETEFRYSRARQPQPKLGPWQADLERLLEANEARPRRERLTLVRVYEALRGLGYEGGYDAVRRHARGWQASRATAVAAAFVPLSFAPGEAYQFDWSHEVVLIGGTTVTVKVAHVRLCYSRMLFVRAYPRETQEMVFDAHDRAFAFFRGTCTRGIYDNMRTAVDAILVGRDRAYNRRFLHMCSHYLVEPVACTPASGWEKGQVENQVGLVRERFFTPRLRVRSYEELNALLLDRCVSHARANRHPEQR	common_virus_hmm	common_virus	NaN	.	0	9720	GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote	cenote	CDS	958	1467	GCA_002754815.1	CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815.1_CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815_1_3	GCA_002754815_1_3	959	1468	GCA_002754815_1_3_2	GCA_002754815_1_3_2	-	9720	.	PFAM:PF03354.14	Large-Terminase	MNPFPSIREAMADPQVFAPHFKGTTWDAWRAFLSAIFGLPMTDVELAIYRQHTGRVEARSAPFREAALIIGRRGGKSRILALIATYLATFRDYEAFLAPGEVATIAVIAADRKQARAIFKYVIGMLKAVDLLAAEIQDETAESVTLRNRVAIEIHTASFRVTRVWNGME*	hallmark_hmm	common_virus	NaN	.	0	9720	GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote_CDS_0002	cloud	direct	high	509	0.998	GCA_002754815.1_03961
GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote	cenote	CDS	1464	1907	GCA_002754815.1	CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815.1_CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815_1_3	GCA_002754815_1_3	1465	1908	GCA_002754815_1_3_3	GCA_002754815_1_3_3	-	9720	.	.	hypothetical protein	MSDVLPVSADEAPKRNRSRKAVPLGPSRLRGTNYRLGPYSTQAAVQGLDQRTREGRLMRQIRKDLIDHLGGNPSVTQRVMIDRAAWLSLRIALLDAKILDGTFTEHDSRTYLAWSGHLSRLMRDLGLKGAAQAPRSLREHLAAKAGA*	.	hypothetical_protein	NaN	.	0	9720	GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote_CDS_0003	cloud	direct	moderate	273	0.615	GCA_002754815.1_03962
GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote	cenote	CDS	1987	2547	GCA_002754815.1	CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815.1_CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815_1_3	GCA_002754815_1_3	1988	2548	GCA_002754815_1_3_4	GCA_002754815_1_3_4	-	9720	.	PDB:1ZR4_E	gamma-delta-Resolvase,-site-specific-recombination	MLVGYARTSTAEQEAGLEAQIRDLKAAGCERIFSERVSSVGARPQWEEAKRFVREGDTLIVTKPDRLARSVHDLTGITKDMRARKVTLRILSMDLDTSTATGALILNVLGSVAEFERSLMLERQREGIAAAKAEGKYTGRKPTARAKADEVLRLRQEGVSGDVIAKQVGISPASVWRIVKGAKNAA*	common_virus_hmm	common_virus	NaN	.	0	9720	GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote_CDS_0004	cloud	direct	high	560	0.998	GCA_002754815.1_03963
GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote	cenote	CDS	2711	3037	GCA_002754815.1	CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815.1_CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815_1_3	GCA_002754815_1_3	2712	3038	GCA_002754815_1_3_5	GCA_002754815_1_3_5	+	9720	.	.	hypothetical protein	MKADPHNLITNGGPIVAHQRDRLMSHVLRIERTRPRGGVAEHPALDKGRYVLGDPKAKGRKHCVENAVYARTIEEAAALVEAGHSLRMGRPGKWPSMICPASLRIVRA*	.	hypothetical_protein	NaN	.	0	9720	GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote_CDS_0005	.	unmatched_CDS	none	0	0	.
GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote	cenote	CDS	3612	5945	GCA_002754815.1	CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815.1_CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815_1_3	GCA_002754815_1_3	3613	5946	GCA_002754815_1_3_6	GCA_002754815_1_3_6	-	9720	.	PFAM:PF04735.11	DNA-helicase	MSTSSPSKGSDFAKAMGPVARELLGDPTDEHRGKGEIRYGTRGSLSIDLTKGTWRDHEAGNGGGVLDLVRAHTGLDKEGAVRWLRDRGHLPNDHSPSKPRKRQVAAYDYTNENGDLLFQVVRFEPKDFRQRRPDGAGGWEWKTAGMDLVLFRLPEVVAGVREGRTIYIVEGEKGANALAALGVVATCSPGGAGKWKLSYGEPLRGANVIVLPDNDPQSRLPDGSLKWHPDGRPVLPGQDHAADIARHLKGVAASVRVLMLPDLPLKGDVADWIAAGGTLAELESLQTAEPTAELEPAQAEQVDYESGIMAVVERFNSRFMLVNESGKAVIFQPGYDPVLKRRRFDRLTHRDLGLLYMNETIAVGMDEKGRTIRKPVSDVWLRHPKRRQYVQGVTFDPTTTAPIPGVLNLWEGFAVAPALGDWSLLRAHIEDVICDGDDVRFMYLFGWMARMFQNPAEQGEVAVVMKGGEGTGKGTLAKVLMRLVGHHGLAIANGKHLVGNFNAHLRDVIFLFADEALFAGDRAHVGALKSLITEPYLTIEAKHQNAIQAPNFLHVMMASNEAWVVPASQDARRFFVLEVSEKVKGDHSYFARIWAQMEAGGFAAMLHDLLAMDLTTFNVRAVPTTEGLQRQKKLSLPTTEAWWFDCLQRGYVYRSKLGLEEMFALWHPTISTELLFASYLEFAKSRNERRILSREDLGRFFVSIGATAKRWRNGVVGEHLAEVETFNGYARRPKPVRAPRVTGYHLGTLDEARAAFSSASGLDSVWDDGDPMEDGGL*	rep_hall_hmm	common_virus	NaN	.	0	9720	GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote_CDS_0006	cloud	direct	high	2333	1.0	GCA_002754815.1_03964
GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote	cenote	CDS	5942	6097	GCA_002754815.1	CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815.1_CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815_1_3	GCA_002754815_1_3	5943	6098	GCA_002754815_1_3_7	GCA_002754815_1_3_7	-	9720	.	.	hypothetical protein	MSSAELHSLYRASLIAAVMEFELCGHSIRFRSLMRRAARLISLARCAEALR*	.	hypothetical_protein	NaN	.	0	9720	GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote_CDS_0007	cloud	ambiguous	low	5	0.032	GCA_002754815.1_03964
GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote	cenote	CDS	6094	6354	GCA_002754815.1	CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815.1_CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815_1_3	GCA_002754815_1_3	6095	6355	GCA_002754815_1_3_8	GCA_002754815_1_3_8	-	9720	.	.	hypothetical protein	MNLLHRQMALAQFVADNLDTKDLRLLADVLKGMSSKDRAYVARNGGKDPEKGRAILNRAERLDRTAAALHRIVDWSAISERDGSKV*	.	hypothetical_protein	NaN	.	0	9720	GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote_CDS_0008	cloud	direct	high	260	0.996	GCA_002754815.1_03965
GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote	cenote	CDS	6351	6896	GCA_002754815.1	CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815.1_CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815_1_3	GCA_002754815_1_3	6352	6897	GCA_002754815_1_3_9	GCA_002754815_1_3_9	-	9720	.	.	hypothetical protein	MTHHPSMGSASYHAGDGSYSKSDAEIAAAIVRSEQAGCAYRTPLLRANLYRAISLAIVSGGRRVPQHFLNHERPCVVLLTDDTPDATGPGRWKQAADLIRWARGAIFHAAEGQADQYSTAVAGALITRRFLIVEMESRHHAEWLALATRVAPRLPVLNIVPPPGKSHPDYSRARPADGRTH*	.	hypothetical_protein	NaN	.	0	9720	GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote_CDS_0009	cloud	direct	high	545	0.998	GCA_002754815.1_03966
GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote	cenote	CDS	7037	7258	GCA_002754815.1	CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815.1_CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815_1_3	GCA_002754815_1_3	7038	7259	GCA_002754815_1_3_10	GCA_002754815_1_3_10	-	9720	.	.	hypothetical protein	MTNYPLTQLPRAVRRATGHDISYRRFWNAAVDGRIPAEQGRNGRWTWDSDQLPAILEAMGLASAKPSAAVMAA*	.	hypothetical_protein	NaN	.	0	9720	GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote_CDS_0010	cloud	direct	high	221	0.995	GCA_002754815.1_03967
GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote	cenote	CDS	7259	8080	GCA_002754815.1	CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815.1_CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815_1_3	GCA_002754815_1_3	7260	8081	GCA_002754815_1_3_11	GCA_002754815_1_3_11	-	9720	.	.	hypothetical protein	MASSGQVIEQLANTAGLLPNTVERSLMPLRADGLVPKGERGTRQERGQYEPQHLANVLLGFAGSQPSDAASSAKELGKLRHIRTLRAEEEIRKNGNTTLLDTLAGVIDDLGRLVYAAQEGSQPIKLSASQVPADIHLSLVPLRAYVIWRIHPDPPVVDHYFLPEKGITSPSGRYALIKQTLIDHELIITAANLWADSLIRRDEFARKSKGASPLPGEPAPSPTDDQFRRKTPNATGDTYTSETNASGGSVQPGSSVGPVIFSPTRPTRARGAR*	.	hypothetical_protein	NaN	.	0	9720	GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote_CDS_0011	cloud	direct	high	821	0.999	GCA_002754815.1_03968
GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote	cenote	CDS	8126	8326	GCA_002754815.1	CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815.1_CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815_1_3	GCA_002754815_1_3	8127	8327	GCA_002754815_1_3_12	GCA_002754815_1_3_12	-	9720	.	PFAM:PF11112.7	DNA-binding-protein	MSDPVLPPAPFTPETLAERWDCSPEHVRTLCKQGRLRSFKIGRGMYRVPVDAVAEYENPGKTALKG*	phrogs_hmm	hypothetical_protein	NaN	.	0	9720	GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote_CDS_0012	cloud	direct	high	200	0.995	GCA_002754815.1_03969
GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote	cenote	CDS	8405	8803	GCA_002754815.1	CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815.1_CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815_1_3	GCA_002754815_1_3	8406	8804	GCA_002754815_1_3_13	GCA_002754815_1_3_13	-	9720	.	.	hypothetical protein	MTARRRAFLALLPVSAVPATAAGLPQPSPDADLIRLCHAFDDLEGQIQALYEDGATPIADDEERKAAIEPLRERQAPILDQICALRAITPEGVRARAWTLRKWDVDLMSDGHQGDTNERLMLALILDLTGDR*	.	hypothetical_protein	NaN	.	0	9720	GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote_CDS_0013	cloud	direct	high	398	0.997	GCA_002754815.1_03970
GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote	cenote	CDS	8800	9009	GCA_002754815.1	CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815.1_CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815_1_3	GCA_002754815_1_3	8801	9010	GCA_002754815_1_3_14	GCA_002754815_1_3_14	-	9720	.	.	hypothetical protein	MKRRHIPRECFCCGAYERKGGTGRLLPWHGRKRELQRRLGDSPLICSECISFAKHVLSGVPAAEQRRAA*	.	hypothetical_protein	NaN	.	0	9720	GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote_CDS_0014	cloud	direct	high	209	0.995	GCA_002754815.1_03971
GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote	cenote	CDS	9006	9413	GCA_002754815.1	CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815.1_CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815_1_3	GCA_002754815_1_3	9007	9414	GCA_002754815_1_3_15	GCA_002754815_1_3_15	-	9720	.	.	hypothetical protein	MTDISRRGLVAAAPALALPMLGVAATATPDAEILRLTALWTSLNARLDELTASLDHCTTHFAREVVWKEIRALQAEEWSVQDALVEAQARTMEGLRAKAQLLHDYLQIMGETGPGLAEVISLSICRDLLQGSIQA*	.	hypothetical_protein	NaN	.	0	9720	GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote_CDS_0015	cloud	direct	high	407	0.998	GCA_002754815.1_03972
GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote	cenote	CDS	9410	9718	GCA_002754815.1	CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815.1_CP024585.1	GCA_002754815.1|CP024585.1	GCA_002754815_1_3	GCA_002754815_1_3	9411	9719	GCA_002754815_1_3_16	GCA_002754815_1_3_16	-	9720	.	.	hypothetical protein	GILGHPDARMIVALDRLQDAAADFHSMARQHLRPSEFERRVRNLTAFYKEELRPASAKAKTLDGLLAKAQHCLADPADPMHFFKLGMSCLRDFAALAAGRLA*	.	hypothetical_protein	NaN	.	0	9720	GCA_002754815.1|CP024585.1@region_1_9720@tool_cenote_CDS_0016	cloud	direct	moderate	282	0.913	GCA_002754815.1_03973
GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote	cenote	tRNA	581413	581487	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C29	969	1043	tRNA-Val	tRNA-Val	+	4180106	.	tRNAscan-SE score: 77.4	Val	NA	tRNAscan-SE	.	C29	18287.0	580445	598732	GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote	cenote	tRNA	597264	597336	GCA_002754815.1	CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815.1_CP024588.1	GCA_002754815.1|CP024588.1	GCA_002754815_1_1	GCA_002754815_1_1@C29	16820	16892	tRNA-Val	tRNA-Val	+	4180106	.	tRNAscan-SE score: 31.9	Val	NA	tRNAscan-SE	.	C29	18287.0	580445	598732	GCA_002754815.1|CP024588.1@region_580446_598732@tool_cenote_tRNA_0002	.	.	.	.	.	.