core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	493478	493621	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	1	144	GCA_002966695_1_1_454	GCA_002966695_1_1_454	+	1901558	.	.	hypothetical protein	MAGGLRFLGPMSGIASLPFILGAAWYGVNRIKFPVEINDRFVFSHHV*	.	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0001	shell	ambiguous	low	16	0.111	GCA_002966695.1_00489
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	493605	494090	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	128	613	GCA_002966695_1_1_455	GCA_002966695_1_1_455	-	1901558	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MAKVYLAMYKHKRDWRKEPVKAIADHITRFCTKGKYSHCEVAIEHIEFGNGHHYEHHTVWDCYSSSVQDGGVRCKQIDVYDREKWDLIPLDGVTEAQIKAYFDRTLGCKYDWWGALGIVLGIKQKRSKYFCSEWCFNAICGGENGWRFSPNQLGAMFKHDD*	phrogs_hmm	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0002	shell	direct	high	485	0.998	GCA_002966695.1_00489
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	494083	494706	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	606	1229	GCA_002966695_1_1_456	GCA_002966695_1_1_456	-	1901558	.	PFAM:PF14301.5	tail-fiber-assembly-protein	MTIYYKNGFFDDTDGGFVPESAVEISQDKYIELLNGQAQGKQIIADKTGYPALIDPQPSAAHQLNLDTLTWEISLEKQTALLTETQTRLIANIDEHAAKIYSTWTRFESEYRERQAAAEAFKAANYEGECSRYISDFAQRARLDNKTATNLILTQAAGLEKLQVELANQRMRKYELKAPNLTIEQMQSIHDDIIKQMDNLMEAYQNG*	phrogs_hmm	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0003	shell	direct	high	623	0.998	GCA_002966695.1_00490
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	494781	495056	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	1304	1579	GCA_002966695_1_1_457	GCA_002966695_1_1_457	+	1901558	.	COG2929	Uncharacterized conserved protein, DUF497 family [Function unknown]. 	MKIEFDPDKNQRNIEERGRPFEQAQYLQWHSALIWKDERTDYGEVRWNALAYLDDRLHAICFKMTKTHLRVISFRKANKREVKKYEQHRQR*	mmseqs_cdd	nonviral_gene	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0004	cloud	direct	high	275	0.996	GCA_002966695.1_00491
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	495034	495342	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	1557	1865	GCA_002966695_1_1_458	GCA_002966695_1_1_458	+	1901558	.	pfam14384	BrnA antitoxin of type II toxin-antitoxin system. BrnA is family of antitoxins that neutralizes the toxin BrnT, pfam04365. It consists of 3 alpha-helices and a C-terminal ribbon-helix-helix DNA binding domain. As in other toxin-antitoxin systems, BrnA negatively autoregulates the brnTA operon and has higher affinity for the DNA operator when complexed with BrnT. It dimerizes with two molecules of its toxin BrnT.	MNNIVSDNERFNLEFTDEELDKFKPIEDVMPQNLLNALLTHQANMENQGLIPRKLTRGKQKQPTKQIVTIRLSADVVEKFRATGKGWQTRINEVLRQYSSQL*	mmseqs_cdd	nonviral_gene	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0005	cloud	direct	high	308	0.997	GCA_002966695.1_00492
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	495349	497292	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	1872	3815	GCA_002966695_1_1_459	GCA_002966695_1_1_459	-	1901558	.	PDB:1OCY_A	Tail-fiber	MADFNKPTVDSEYTQFPTEIRAAISAALSFLDGEHTNVPLKAKRWNPSTKIFEEYNGAQWVPMATEYKLPVDYNSLKNKPLPNSAVDDESDTKFASSAAVKTAYDKAAEAKEAASAKQSPATTLAGYGIGNFKVEQGQGDANGYKTDGNYYLASGQNLPENGAWHIEVVSGGATNAVRQIARKANDNKIKTRFFNGSNWSEWKETGGDGVPIGAVVSFPRAVINPVGFLKANGTTFNQQTFPDLYRTLGNSNKLPDLTRSDVGMTAYFAVDNIPAGWIAFDEIATQVTEQRYPELYRYLVGKYGSIASVPKVADRFLRNAGNGLSVGQTQEDAIRNITGKYLGMHAGDIDGVFYRGDRSGVYHDGGTGHKGYIGFDASRVVPTANENRPKSLVLRLCIKAVSSFDDVVFWIKSHGEVTNAGTLDAGRLAQGLQDKADRNHTHTVSQITDFNSVTSGMINDAITYENIGGWEVYKFSNGLMILTYMHENTEPSFNRNINDENDVITLMYPVAFTSLPVVSITHQLSRPYFERVNGQNWTTSKANNPKGQSNQLLSSFHESNNVEIGLCYQSSNTQCQFTYSQNYVYISESTLHITAIGRWKGQSYQRIVTDAPTVEEVNSEANQNPSSSGRNNRGRVRRRPDGSVVER*	hallmark_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0006	cloud	direct	high	1943	0.999	GCA_002966695.1_00493
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	497303	500953	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	3826	7476	GCA_002966695_1_1_460	GCA_002966695_1_1_460	-	1901558	.	PFAM:PF13550.5	tail-protein	MQIVGRKGGGKGGGGGGRAPVEAPDSLKSCSYAKFIDVISCGEIEGPVNGLNSVYFGDVQLQDEKGKFNFNNVAIEWRPGSVRQAPSEICQTNEVTTDVNTEVKKDKPITRSIIAPEADIVRVTITVPGLSHQNKSNGDINGTKVELKVEYQANGSQWIDAGNIVIEGKTTSSYNREHSFRLTGEAPWNIKVTRLTDDSDSQVLQNKTIFSKITTVFEEKLTYPGVAYVGVQIDAEQFSSIPSRGYHCRGIKLKVPSNYNPETREYSGDWDGTFIVKYSNNPVWIYFDLLTNEEYGAGEYIKEDMLDKWSMYQIAKYCDELVPDGFGGREPRFTCNVYIQTKQEAFKLLRDLTSVFRAMSYWSSGTQMLVQDSPKEPIYQFNNTNVIGGKFSRSGSNIKTRHNVVLVTWNDPKKYFKQSVEYIEDSEAIVKMGYISQTEVVAFGCTSRGQARRLGKWLLYTEQYESEVITFSCGQDGAIPIPGEVIQVSDVHRSGERRGGRVKDGSTTNRIILDAEVEITKESTISIVNEKGELEQRAITQRGKLTEIDVRPVFTSVTENSTWIIASSDIKPEFYRVISIVESDDGSYTITASDYNPSKFEHIENGNELIEYDTTNNTLDTGVKNVVITDEIYRGLGGSIQTKIVVSYEPAKSLTSRYQIEYREGNGNWKQMEPTTLTSVDIPNVKDGVLYQIRIKTSNVLGVWSDNPIQNYEPIGRLRPPHNVSNLRHKAIAQEGAFLIWDLSPDIDLEYYEIKKGDTYEISKPVGKIKANEFNLGFIRAGEHKYWLSAVDSSDVRSESPTAVTFNISGGQVENLVAEIVGDEVLMTWGETKNNSFSTELYEVKKDDDVLALVKSTSFKFKADFNGNKKFTVTAIDLGGNRSESAQAQLIVHRPTPVSISQQVIDNYVMLRWQSAKATLPIVYYELRKGETIENSEFITNIDGLAFPQFETVGGLYKYWIIGVDSAGNRSEPQYTLSNVAQPPDYILKYDYNSSYDGIKNGSDKIDGKLYLPVRRDTWAEHFRSNNLATPKSQINRGFPLYLQPIDESGYYEEEMDYGTVLASSKITLTPKVISSGSYDINYHIAVKENAKDNWREHDQQSVYETNFRYVKFRITVSNAQKPVVIESLNLKLDQKQKTDGGTVQANASDIKGTWVNFATEFIDASVPVLTPQSKQPLFATSDFKDEPKPKGFYVFLFDKNGNRVSGKVGWVVKGV*	hallmark_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0007	shell	direct	high	3650	1.0	GCA_002966695.1_00494
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	500957	501676	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	7480	8199	GCA_002966695_1_1_461	GCA_002966695_1_1_461	-	1901558	.	PFAM:PF06805.11	tail-assembly-protein-I	MDNSTANEQRTSCDIRKIRLKGELGKRFGKVHKLAVKTPAEAIRALCVLKRGFKEFLLESEKHGIVYRFLVQREELTTSSDEFQMRYGAQAEFHLIPIIRGSKRGGFFQLIAGAAMIGLAFWNPLGWATIGGTGFLSSAATLPLTIGASLVLGGISQLLVPVPKVSGPQERPENKPSYLFNGAVNTTEQGQPIPLLYGELIVGSAVVSAGLTDKEIPIRTNSTSNNETRGKLKFKRVSG*	hallmark_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0008	shell	direct	high	719	0.999	GCA_002966695.1_00495
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	501615	502322	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	8138	8845	GCA_002966695_1_1_462	GCA_002966695_1_1_462	-	1901558	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MKHIDDAIAHAKQSYPHESCGFFVLKNGKLQYVTCTNLAAETEDEFLIGIEDYARAEGVGEIRTVVHSHPDESCLPSIADQDAHKMSGLEWCIIGLEGDEVSTHFMPALTEVPDLYGRKFIHGMTDCYGFVRDWYHQELGINLPNYNRIDGWWDNGGNLYVDNFEDAGFYPVKDLKIGDMIVMQINANVPNHAGVYLGDGLIGHHLYGRLSSKDVYGQFYRERTTHIMRHKENTP*	mmseqs_cdd	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0009	shell	direct	high	707	0.999	GCA_002966695.1_00496
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	502324	502974	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	8847	9497	GCA_002966695_1_1_463	GCA_002966695_1_1_463	-	1901558	.	PFAM:PF05100.11	minor-tail-protein-	MSIYGQLQQYASHGWIELFELDLTKFGDIVYRFHDGLNPLGQAIVWQGLEYTPYPVKAEGFAVDGLNPVRPRITFSNLGGAITLVLAKLKGIEGARLTRKRTKIIYLDAVNFENGNLTADPNAHLPDDIFYISQKTSEDHLTVSFELLPATDLEGVKLPRRQIVAQYCTHKYKGQFCGYTGDKATCAKTLADCKAHFGEHSELPFGGFPSAAYMRI*	hallmark_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0010	shell	direct	high	650	0.998	GCA_002966695.1_00497
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	503115	503234	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	9638	9757	GCA_002966695_1_1_464	GCA_002966695_1_1_464	-	1901558	.	.	hypothetical protein	MSNQTQLSKATIGLTDSQAGNGAQSISIISESRIYATSW*	.	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0011	shell	direct	high	119	0.992	GCA_002966695.1_00498
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	503694	504227	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	10217	10750	GCA_002966695_1_1_465	GCA_002966695_1_1_465	-	1901558	.	pfam14020	Protein of unknown function (DUF4236). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 69 and 402 amino acids in length.	MAIKFRKTKKILPGVKLNISKSGVSVTTGIKGASINIGKNGVYRNLGIPGTGISKRDKLEFSSSKEEDYCNLDVLIDYVVDGQVVTLNVAITDYYPEKNAIWGYCEELEQESVFYLNDIQRVFDIKSGKDVEDVAEYFLQLNQSEDKEKSNDPPIGKILIVTFILFLIAYTFLFTKN*	mmseqs_cdd	nonviral_gene	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0012	shell	direct	high	533	0.998	GCA_002966695.1_00500
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	504289	504633	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	10812	11156	GCA_002966695_1_1_466	GCA_002966695_1_1_466	-	1901558	.	PFAM:PF05939.12	minor-tail-protein	MAKERFKWKTLWGLSTETEPKVKEIKFGDGYSQRIQDGLNHIVSKATLTVRLNKRDKAAIDELESFLLRHGGYKSFEWLQPGKKTPILVVCRKWTSTDNGVYVDYELPFEQVFN*	hallmark_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0013	shell	direct	high	344	0.997	GCA_002966695.1_00501
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	504634	507012	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	11157	13535	GCA_002966695_1_1_467	GCA_002966695_1_1_467	-	1901558	.	UniProtKB:I0K2M4_9BACT	tail-tape-measure-protein-	MDQISNLKIKLEAETAKFTEEINKARNSLNGLGKTTGGINLTKLAIGGLAAAALSAAGALAAMYSSAMAGIELYAETERYLARTEAQLKATGAAVGFTSDELNDFAGSLAMNTLASVDGVRSAMSVMMTYRSVTGETFKTAIKLAQDLAEVYKTDVSSEARNLGRALESPAEAVSLLKRKGIELTETQKDLIQSFVESGEKAKAQEIILHELQKRVGGAGEAAASDTVAGALDTLGQATDELKEAFATSTGITDLYKASINKLAEAFLWLTKVMRGVDTKTHVDTLEKQIDVLEKSKKSLEEKAKSGIYGDGINDALAHTTKELEKARENLAKSRKELDAQEAESRKRQQEANEAKEKHERSERETAGASTLGKIEDKLKSRSEKLTAQYEKDKKALENLVLSEEEIRRRGFDNIDALRQSSLDKLTQSYNKELAELQKSEDKKSAVKSSSKTNDLARLDMAYADELQKITLVHQERIALIGKMAISERDAKERGFASALELRKHYLELENQAYEDAINKQKDKMRRDEYDKTEKVRSFFNDVRGSGNDPYVQNDITRENQLTKAQELYDQQLLSVQQFEEAKALIEDTYRQRKEDLDRQAVSSQLSMASSLFDGLAGLAEVAGGKQSGAYRTLFAISKSFQIAQSMLNLHAAVMKAMNDPTAVTPAQKFANMAAVAAQGAAVLQQIKSVTISGARANGGPVGGGRAYLVGERGPEIFVPGATGQITSNENLNKALGSGGGVNSVVINQTNNFDGNGADNAELARMVAAATKQQVYEVIRNESRPGGMMGGR*	hallmark_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0014	shell	direct	high	2378	1.0	GCA_002966695.1_00502
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	506954	507259	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	13477	13782	GCA_002966695_1_1_468	GCA_002966695_1_1_468	-	1901558	.	PFAM:PF06223.11	Minor-tail-protein-	MLREMSVAEYFCWCKYFGKRPFTLELLDYGYGTVASAVYNVAALKQIVTAQDFSVLHTAKPNAEMTTEEMMDASIANDGVLRIGPDQQFKNQTRGRDGKIY*	hallmark_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0015	shell	direct	high	305	0.997	GCA_002966695.1_00503
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	507322	507705	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	13845	14228	GCA_002966695_1_1_469	GCA_002966695_1_1_469	-	1901558	.	PFAM:PF06894.10	tail-assembly-chaperone	MLKKVKFELRDQVLVVSAISALDYLDYVDYLNSLDKPEPVSENDTEQELNSKLNKITRNNLMAHTRLIAISLSYDSDKSVDDLQKELLTTWTQADIFRVLEAVQDVCEFPQADPSESTQEDGEQKNA*	hallmark_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0016	shell	direct	high	383	0.997	GCA_002966695.1_00504
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	507711	508211	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	14234	14734	GCA_002966695_1_1_470	GCA_002966695_1_1_470	-	1901558	.	PFAM:PF16463.4	tail-tube-protein	MAKNTTPTKGAGTMFYRLKDDKESTVIVNGTIKAADIKKPENWDRIAKIKELSPGEVTADSYEDNYLDDANADWKSTSQGAKSAGETTLTLAWLPGDTAQQALVSDFNTGKKKYYLVVYPNGVRDVYYAWVSSLGKTVPQNEVMTRTVKLTNVGKPLLAEYNEAGD*	hallmark_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0017	shell	direct	high	500	0.998	GCA_002966695.1_00505
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	508204	508608	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	14727	15131	GCA_002966695_1_1_471	GCA_002966695_1_1_471	-	1901558	.	PFAM:PF06141.10	Minor-tail-protein	MKIHSKIRQAVIDALRPHLPKVKEFSNGKPSFTDIESQSPTVAVFISGVSPTGYLDGTMQATLHVACFMKSAAREDDLDKLTQEIYESGIVESSLTTLTENIAFTAFDYEQDDQMATWIAADLQYAITYEVDNG*	hallmark_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0018	shell	direct	high	404	0.998	GCA_002966695.1_00506
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	508605	509150	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	15128	15673	GCA_002966695_1_1_472	GCA_002966695_1_1_472	-	1901558	.	PFAM:PF06763.10	minor-tail-protein	MAINDDIEKAKKALSDIDKKAVPQAMARTINNIAAKVMVRSVIETSKKVDVPKRLIKGRAKLERAKPRRLSAFIRVNRGNLPVIRLVTGGGRFVRRGENKGQLKIGNRLYPRAFVQKLKNGRVQVLQRQGKDRYPIDVVKIPLKTPLTESFNAEVKRAYEKDIPQELRTQLIRQIQIVVKK*	hallmark_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0019	shell	direct	high	545	0.998	GCA_002966695.1_00507
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	509150	509455	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	15673	15978	GCA_002966695_1_1_473	GCA_002966695_1_1_473	-	1901558	.	PDB:2KX4_A	head-closure-knob	MSRSTLSPFDDALAQADKVITDVMMSVYVINGKKYKAVLDETPKEMEPMNGVYRTLTMFKSSGYKPKKGDKTTINGVDYVVTGFTFNSGTIMLQLEEDASY*	hallmark_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0020	shell	direct	high	305	0.997	GCA_002966695.1_00508
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	509436	509759	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	15959	16282	GCA_002966695_1_1_474	GCA_002966695_1_1_474	-	1901558	.	COG5471	Predicted phage recombinase, RecA/RadA family [Mobilome: prophages, transposons]. 	MAKNYMQDGNTVRFTAAAAVKSGDVVMLENLVAIAISDVEKSAVGVGLTTGVFTVKAKAADDIKQGAIVYWSATEGATTTAGTNKRLGIAWHASGATVDTVDVKINA*	mmseqs_cdd	nonviral_gene	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0021	shell	direct	high	323	0.997	GCA_002966695.1_00509
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	509838	511844	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	16361	18367	GCA_002966695_1_1_475	GCA_002966695_1_1_475	-	1901558	.	PDB:6WKK_D	Major-Capsid-Protein	MATSATKTNNQSWYSIKAKANDTAEISIYDEIGFWGVSAASFAQDLKDCGNNIKQINLHIHSPGGDVFDGIAIYNLLKNHPAKVTVYIDGLAASMASVIAMAGNEVIMPENAMMMIHKPWGIQGGDAEDMRKYADLLDKVENTLIPAYASKTGKTPEELAEMLSAETWLNGKECVEQGFADKLAEPLVAMASIKSRKLEDFENMPKAMKDMLFKPQGNAGASAPQATPTPAQPAPTEPANQAPTAPVDNTTQVQAELNKRNTDIKAVFAPFGTTHNDLLVECLGDLSITADQAKDKLLAKLGAGTTPSAAVTPYADNGNIVGDSVKQSLLARAGIDKDKVDAKDNAYNAMTLRELARASLVDRGISVSGHNAMSMVGLAFTHSSSDFGQILIDVAHKSLLKGWETAAENFDQFTSRGTLTDFRAAKRVGLGDFGYLPQVGEGEEYTYGTIGDEGASVALATYGQLFSITRQAIINDDMHLLTKIPEKMGQAARATIAKLVFALLTGNAIAQDGKKLFDASHKNSFDNAALDVTNIDKAIQMMNGFVNTRGEPLAIEPDFMLLPTSLYTRAKQVLGSASVEGADINSGIINPIRDIVPTVKSARLQVADPKSWYLINKEAIEVSYLDGIDTPYMEQQQGFTVDGVSTKVRIDAGVNVIDYRGIVKVTNK*	hallmark_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0022	shell	direct	high	2006	1.0	GCA_002966695.1_00510
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	511816	513339	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	18339	19862	GCA_002966695_1_1_476	GCA_002966695_1_1_476	-	1901558	.	CDD:COG5511	Major-Capsid-protein	MGILDKTIAAISPKWGAQRAKSRYVMNAYEAAMPSRTHKAKRESQGANVSTKQSAVSLREQARALDQNHDIVIGILDKMEERVIGSRGIHIEPQPMNLNGDVNETLAEQIRKKWAEWSIRPEVTGQFTRPELERMLLRTWLRDGEVFIQLVRGSVAGLNHSTKIAFSLEALEPDFVPMNTLDTANLIQGVELDAWRRPKSYRVYMDNPQENNRTYGRVKSVPAENMLHLAFKKRLHQLRGVSMLHGVIIRLADLKDYEESERVAARIAAAFTMYIKKGDAAIYGDNEDYSADSPERDFEIAPGAIIDDLKPGEDIGLINSNRPNVNLETFRNGQLRATAAGTRSSYSSIARDYNGTYSSQRQELVESFEGYSVLQDTFVAHISRPIYREWLKMAIVSGEIDVPVDIDPASLYNAVYSGPVMPWIDPTKEAQAWKERIKGGLATESQAVRASGSNPAEVKRRRRVEVEENRKFGLKFDTDLTNTGTTNDKTKNDSVAGGDGNERNKDE*	hallmark_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0023	shell	direct	high	1523	0.999	GCA_002966695.1_00511
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	513343	513561	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	19866	20084	GCA_002966695_1_1_477	GCA_002966695_1_1_477	-	1901558	.	.	hypothetical protein	MIYDKDELEEKIRALDEKIENAQSQVSFNGRSVSYQVSEWTKQRDRYQQMLNELLAETRQRIKRHRIKYARF*	.	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0024	shell	direct	high	218	0.995	GCA_002966695.1_00512
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	513558	515678	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	20081	22201	GCA_002966695_1_1_478	GCA_002966695_1_1_478	-	1901558	.	CDD:COG5525	Large-Terminase	MFASAKDIRRDIANLLKPPRRMKVSEAVAEYMRVPVGGGNSVKWDKDTAAYMLDPMDCLNSREYDAVIFVGPARTGKTIGLIDGWITYAIICDPSDFLLVQLTQEKASEHSRKRLDRTFRCSPEIAKRLSPRKNDNNVHDKYFRAGNLLKIGWPSINVLSSSDYKYVALTDYDRWPDDVDGEGDGFSLASKRTTTFMSAGMTLVESSPGKDIVDIKHHPKTTHEAPPTTGILSLYNRGDRRRFYWQCPHCKEWFEPSMANMVGYRNDTDYVKASENARLQCPHCQSLVDPDKKRALNIGGKWLKEGQTIDKDGVIHGEGRNSRIASFWLEGPAAAYQTWAQLTYKLLTAEHEFEMTGSEETLKAVTNTDWGLPYLPRSALEQRRSDELMERREETEKRTVPYGCRFLLAAVDVQGGRNRRFVVQIVGYGENSERWLIDRYNIKSSMRSNSDGESLPIDPSAYPEDWDLLISDVLNKQYRIEGLDGGVMPILAMAVDSGGEDGVTDNAYKFWRRCKRDGISKRVYLVKGDSTKRQKLISRTYPDNTSRSDRHAKARGDVPLYLLQTDQLKDRISNALSRETIGANYIHFPSWLGEWFFDELTYEERGQDGKWRKPGKGNNEAFDLFCYAHAIAILRGYERIKWGDEDNVPYWAKLPSVNPNVIRKESSAPEEAESAVEIEQVKPQPKPKPKSNWLNGGASKKKGGWL*	hallmark_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0025	shell	direct	high	2120	1.0	GCA_002966695.1_00513
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	515681	516154	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	22204	22677	GCA_002966695_1_1_479	GCA_002966695_1_1_479	-	1901558	.	pfam07278	Protein of unknown function (DUF1441). This family consists of several hypothetical Enterobacterial proteins of around 160 residues in length. The function of this family is unknown. However, it appears to be distantly related to other HTH families so may act as a transcriptional regulator.	MDNLYDLKLNINQIAELVGMHRQTVSQRLAGLTPAIGSNSKLKLYTLSDLIKIGLAEKMTADVDSLSPVERRAFWQAENERLKYERDTGELVPSFEVAQEMGFLAKAVVQSLDTLPDILERDCALTPAQLTRVIQVIDDVKSQMSLHIQAGDNKSEE*	mmseqs_cdd	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0026	shell	direct	high	473	0.998	GCA_002966695.1_00514
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	516431	516820	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	22954	23343	GCA_002966695_1_1_480	GCA_002966695_1_1_480	-	1901558	.	.	hypothetical protein	MLTIKIIQDGVTSITESNSFVFYDETSREYKEMLRLADKLKEKPTTLNGIYYTQPMYGDQECKEVIREESIYCSARNNPTDKIIGMMIDFIPDDEHGDQGIEKEIAYSLIGTGDHIYVTNEQGKTVFNI*	.	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0027	cloud	direct	high	389	0.997	GCA_002966695.1_00515
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	516862	517104	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	23385	23627	GCA_002966695_1_1_481	GCA_002966695_1_1_481	-	1901558	.	PDB:5CYB_A	Lipoprotein	MPTLVCLSLFLTACTNKVTTKAEYIYPPQAYTAPCVKTAFTGETYGDVVIQLVKVTAERDKCASQVDNLNKWINQTKTAN*	common_virus_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0028	shell	ambiguous	low	49	0.202	GCA_002966695.1_00516
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	517055	517378	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	23578	23901	GCA_002966695_1_1_482	GCA_002966695_1_1_482	-	1901558	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MAKYIYMALGVVVVVLFGALRYQSGVIDELEITTKQQEKTIQQQEDANKSLSLALQQERDAVIAQQERNDEIERVATENAESVKTIIKTQPCANTRLPQSVLDRLYK*	mmseqs_cdd	nonviral_gene	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0029	shell	direct	high	323	0.997	GCA_002966695.1_00516
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	517371	517973	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	23894	24496	GCA_002966695_1_1_483	GCA_002966695_1_1_483	-	1901558	.	PDB:3WH1_A	Chitinase-	MTMMISEVTFNKIFPHAVKGVYQAISAQIEKAGCVTKMQQAMFLAQCGHESGGFTRFKENLNYSWLGLSKTFHKYFPDSLTAKKYERKPELIANRVYANRLGNGDEKSGDGWKYRGRGLIQITGKDNYAAFRKWLGRDIEPEDVASNLDLSVKTAIWYWQCCELAELNSVEKVTRRINGGLNGIDERCKLYRALMVTDNG*	common_virus_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0030	shell	direct	high	602	0.998	GCA_002966695.1_00517
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	517939	518298	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	24462	24821	GCA_002966695_1_1_484	GCA_002966695_1_1_484	-	1901558	.	TIGR01594	phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]	MPIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPTIRYVLIDAAMCASIAGVAVPICTHLFGHTEYSSFLGTMIGFVGTEKIREFLFKFINRRIDKDDNDDFRSDIQ*	mmseqs_cdd	nonviral_gene	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0031	shell	direct	high	359	0.997	GCA_002966695.1_00518
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	518538	519056	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	25061	25579	GCA_002966695_1_1_485	GCA_002966695_1_1_485	-	1901558	.	pfam06530	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	MRKFSELSELTIEQEEFVDRYMYQWGAWVRSGRLDKPQLNIIAKLMQSVIPAEPNEPICDDETGFMISQTIEMFFKKNDQILHFIVFAYYVNKRTINFIAEHLHGKSKAKEMRPCAGKSNVRVPSFRTIYREVEKEIHFAKAIIHELLITCFIIQRTSRERATNIKKIKITY*	mmseqs_cdd	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0032	shell	direct	high	518	0.998	GCA_002966695.1_00519
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	519057	519602	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	25580	26125	GCA_002966695_1_1_486	GCA_002966695_1_1_486	-	1901558	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKVCGKAFVKTFSSTQKVCSPECAIKLARDNVQKAQERAEKKRQRERKAKLKSRSEWLKEAQSVFNKFIRLRDKNEPCISCGRYHQGQYHAGHYRSVGACPELRFCELNVHKQCAPCNDHKSGNIIEYRINLVNKIGADKVAWLERQDHEPKKYTIEDCKAIIKYYKTKIKELEE*	common_virus_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0033	shell	direct	high	545	0.998	GCA_002966695.1_00520
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	519602	519694	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	26125	26217	GCA_002966695_1_1_487	GCA_002966695_1_1_487	-	1901558	.	.	hypothetical protein	MKRLNDDEILELKIVLLIAAVWVMFNMVFG*	.	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0034	shell	direct	moderate	92	0.989	GCA_002966695.1_00521
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	519691	520110	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	26214	26633	GCA_002966695_1_1_488	GCA_002966695_1_1_488	-	1901558	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPIDDKKPLVVKIQPITRSLEQNSKLHALLSDISKQCEFNGKKRDIDTWKMIMVSAHKIATGGQAEMVIGLEGEVINLRESTAQMGVKRLASLIEYIQSWGVQNGVRFNDRWRFE*	mmseqs_cdd	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0035	shell	direct	high	419	0.998	GCA_002966695.1_00522
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	520147	520368	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	26670	26891	GCA_002966695_1_1_489	GCA_002966695_1_1_489	-	1901558	.	.	hypothetical protein	MMKDFYIHRSEYHDGSTKGFRHGIKHKRHDCFRGDVRVLQRIDGKMVQISRVRKRFKTYEDAHAWARGLKCKE*	.	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0036	cloud	direct	high	221	0.995	GCA_002966695.1_00523
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	520365	521288	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	26888	27811	GCA_002966695_1_1_490	GCA_002966695_1_1_490	-	1901558	.	PFAM:PF02384.15	DNA-methyltransferase	MSFKEHNNRKKANKFAEYITGESLRRYLAEKVEKYLGKNPSVFDGAAGSGQLEQFIQPSKFIAVEIQAESCAALANNYPDAEIHNTSFFLYQSEPKSDCVVMNPPFSLKFKELAEEEKAAIQADFPWKKSGVLDDVFMLKGLANAYRFGFFIMFPGIAYRNTEKTLREVIGNQLVELNLIQNAFEDTPISVLFLVVDKTKSNNKTYRELYDCATNKIINADEWLIDSDKWDTISPPEPPKEKIDPMKLELMSQAQLKEQIRAQIQFSGMVFDLERWPRKDFEKFCDEVCALIQEEKKSNRFLFGWGE*	phrogs_hmm	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0037	shell	direct	high	923	0.999	GCA_002966695.1_00524
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	521285	521866	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	27808	28389	GCA_002966695_1_1_491	GCA_002966695_1_1_491	-	1901558	.	PFAM:PF05869.10	Adenine-specific-DNA-methyltransferase	MTEQQFDKNTWKTPCYVFEWLSQRFGWFDLDGCATANNALTWRYIGEPNSDDDEHQSIADDFLMPIEQMLDVLLDEVAERCSAPLRIYVNPPYSNVTPYLQRAKELCDAGYLVVMLLNNDKSTQWYQNHIQGVANEVIDITGGRIAFINPVTGKEIKGNSKGQMVVVFDPTMEDFVTRSISLDFIKKVGGYSK*	common_virus_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0038	shell	direct	high	581	0.998	GCA_002966695.1_00525
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	521863	522504	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	28386	29027	GCA_002966695_1_1_492	GCA_002966695_1_1_492	-	1901558	.	PFAM:PF06992.10	Replication-protein-P	MANSITQNQINTLPPERTQRAEETINWLFQELKSIFPGWRAAFETEADYLSAKKTWLRVLVREKITRPQLENGICEAEKSLDKFLPSVGLFVYWCKAYDYHALGLPNEAELYQRYKTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKAIPKLLTEAAEKVRSNFPFEDIPKMIPVKPSFYDKAKADKARDSLMAMMKGKGALQ*	rep_hall_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0039	shell	direct	high	641	0.998	GCA_002966695.1_00526
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	522489	523247	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	29012	29770	GCA_002966695_1_1_493	GCA_002966695_1_1_493	-	1901558	.	pfam13730	Helix-turn-helix domain. 	MSMRLMVQAMNCKVGNPARKLVLLKLADNANDDGICFPSYQYIADKCEMTRRSAISHIEYLIKMGLVSKKERKNKDGSISNLYFLHLEQGSENFALGSENISLGSENFALGGSENISPRTSHSLEPVNEPKKTTQKSESEMLLEQFGITGQLAKDFIAHRKAKKGVINQTQLNRLQKQADKAGISICEAVEICIERNWQGFNASWDWRDEKLRPNSPHLGQSHRNKPKFDDTQTGWSAGMNFIVDGTQWQIP*	mmseqs_cdd	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0040	shell	direct	high	758	0.999	GCA_002966695.1_00527
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	523244	523918	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	29767	30441	GCA_002966695_1_1_494	GCA_002966695_1_1_494	-	1901558	.	PFAM:PF03374.13	KilA-protein	MNQLLTITKENASTLTMSSREIAELCEKRHDNVLKLVRELIERGLLKNTIPHSYIHPQNNQRYFEFFSDKRDTLVIVARLSPEFTAAVVDRWQALENQQKPTALIPQSFSEALMLAAQLQAEKERNAPKVAFVDHYVEVGTSKSFRETAKILKMPERALVNRLVEDKYLYRQSGVLLPYQSAHTKDLFTVKTGTAEHGHNYTQTRVTSKGIEFIASRYASELML*	common_virus_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0041	shell	direct	high	674	0.999	GCA_002966695.1_00528
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	523967	524407	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	30490	30930	GCA_002966695_1_1_495	GCA_002966695_1_1_495	-	1901558	.	PFAM:PF06892.10	CII-like-transcriptional-activator	MAMKKVIMEMIEKIPGGKSAVAGFLGFTESELNNRLYQTKGQRFKNEELIAIQQEYGCTQFIDELCRLAGGRFVPDVAENELDKVELANLQLHELSARGLLFAALETALEDGEITSQEEDKIRQALSKHLAATQHSIECAIVLHKK*	phrogs_hmm	nonviral_gene	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0042	shell	direct	high	440	0.998	GCA_002966695.1_00529
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	524462	524701	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	30985	31224	GCA_002966695_1_1_496	GCA_002966695_1_1_496	-	1901558	.	PFAM:PF10078.8	transcriptional-repressor	MGNLKHIIDSLGAAKVADLCGLSVRAVYKWRTSNSLPRTEYTGETRYSEILSQALGGSVSAEEIRHFSKPIKSGSAIIA*	phrogs_hmm	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0043	shell	direct	high	239	0.996	GCA_002966695.1_00530
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	524802	525467	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	31325	31990	GCA_002966695_1_1_497	GCA_002966695_1_1_497	+	1901558	.	PDB:2FJR_A	Repressor-protein-CI	MITEEKIKQDFAARLDIACKRKNLPEKGRGKVIADILKITPKAVSKWFNAETLPTQANIYVLADFLGVTKEWLTYGDKNASIEKIEKQISYPLLSPIQAGLWTDIRSLEGFDGYEMIPSTVIASENSFYLRIEGKSMLPRFNEGDLVLIDPDIVPTPGKFVAAINGDNEATFKQYKELGTRTPEGIPHFELVPLNPMFPTLSSLNQEIRIIGVARERVETL*	common_virus_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0044	shell	direct	high	665	0.998	GCA_002966695.1_00531
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	525495	526265	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	32018	32788	GCA_002966695_1_1_498	GCA_002966695_1_1_498	+	1901558	.	3AKJ_B	CtkA (E.C.2.7.11.1)	MKAEEVLLDKRMDKIIVIRERMEMGVTRPFICQTDKGNWFIVKTLSMMPIGQLLAEVIGSKLAHEIGLPCPSIDFVEVSHESTQYVSSEWRQDLPNGIAFASSFVVNAKIAKTVQVKNPAFLSEPEQKLLYMFDRWILNSDRTSSQVGTGNINLLFDEQQQKILVIDHNLAFDERADFSEHIFSQKNREWRLDWVDKQTFMDKAVDILKNFDDIYQSIPDDWFVEDEVFHKIDQQINRIKALLNRITQENYWDNIE*	hhsuite_tools	nonviral_gene	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0045	shell	direct	moderate	707	0.917	GCA_002966695.1_00532
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	526262	527077	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	32785	33600	GCA_002966695_1_1_499	GCA_002966695_1_1_499	+	1901558	.	pfam11236	Protein of unknown function (DUF3037). This bacterial family of proteins has no known function.	MKQPILYSFVRYRPYFETGEFVNVGLLMCEPEKKKLTYQLVPKNNKRVNDFFYKSKMFETVRETINDELQYIVSQPFNGSAQDMATFFHHYIDVKEGIVQYSNAAVGMVDDPQGYFNKLYTQFIQNAGVKPENQEQAILKHYKTLFRQENDSVLAQYKQYMVNGDFAKFALPLALKNQQDKHILKAVKPLAFDQVESPSMIEHCDSWVAKINRAEQEGFIKRENILFALDTPNTAHKANILDTIKRTFDHFKLQHISWDEDKQIINFAKAI*	mmseqs_cdd	nonviral_gene	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0046	shell	direct	high	815	0.999	GCA_002966695.1_00533
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	527177	527344	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	33700	33867	GCA_002966695_1_1_500	GCA_002966695_1_1_500	-	1901558	.	.	hypothetical protein	MKKEFKKWLISLNCEGINSLGINEIVSRVDEELRIVRANEQERIVLEELIAAFNK*	.	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0047	shell	direct	high	167	0.994	GCA_002966695.1_00534
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	527705	527875	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	34228	34398	GCA_002966695_1_1_501	GCA_002966695_1_1_501	-	1901558	.	COG3422	Uncharacterized conserved protein YegP, UPF0339 family [Function unknown]. 	MYFQIFKGVNNQWYWRLKAANHEIIAVSEGYTTKQNCINCIHLVMDTNRNTPIYES*	mmseqs_cdd	nonviral_gene	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0048	shell	direct	high	170	0.994	GCA_002966695.1_00535
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	527890	528111	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	34413	34634	GCA_002966695_1_1_502	GCA_002966695_1_1_502	+	1901558	.	.	hypothetical protein	MQDEMKRYAISYYFDGKRWATDVYAHSFEEAEEKLKAMSQGTVDGEIHLSVYIPENPLSKVSRLITRIAKKFM*	.	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0049	shell	direct	high	221	0.995	GCA_002966695.1_00536
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	528321	528596	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	34844	35119	GCA_002966695_1_1_503	GCA_002966695_1_1_503	+	1901558	.	.	hypothetical protein	MWIFQNTFASTETQRHVKPLRMIDEVCFEMVTIKQTRLKMEEKQENSLSDNDKELIKQAVLESAAKNTNFPPDKLAKSICDAIYLIDSYKH*	.	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0050	shell	direct	moderate	158	0.572	GCA_002966695.1_00537
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	528740	529063	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	35263	35586	GCA_002966695_1_1_504	GCA_002966695_1_1_504	+	1901558	.	.	hypothetical protein	MKKHQLKNSFTYFMKGTEKALKIMTCLFGAIIVSAVISLGAKANQTDWHDNELSEQIQQEARAKAKAQWREENGIYQANLTPQVNADMYRYVEQKQAEINRTLGEKQ*	.	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0051	cloud	direct	high	323	0.997	GCA_002966695.1_00538
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	529060	529353	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	35583	35876	GCA_002966695_1_1_505	GCA_002966695_1_1_505	+	1901558	.	.	hypothetical protein	MKPSDDYYYQLDAAHQRKVDWQAGYEIALDEVATEIDNDLKQGDQTHYHELTEMLCDNDNFWLAIGSGASYEPYRQEAIKKIAERELHARMNDYDPD*	.	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0052	shell	direct	high	293	0.997	GCA_002966695.1_00539
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	529366	530286	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	35889	36809	GCA_002966695_1_1_506	GCA_002966695_1_1_506	+	1901558	.	PFAM:PF03837.13	RecT-protein	MTNQVQHQQNKQTPALKTFFESANVQNKIKELVGKNAATFATSVMQITNSNSMLKTADPMSIFNAACMAATLNLPLQNGLGFAYIVPFRNNKEKKTEAQFQIGYKGFIQLAQRSGQFKRLVALPVYKKQLIKKDFINGFEFDWEQEPEQNENPIGYYAYFKLVNDFSAELYMSHDDIVKHAQRYSQTFKKGYGVWHDNFEAMALKTVTKLLLSKQAPLSVEMQQAVLADQAVVKDVENQEFNYTDNIQEAEFLAVVDEATFEQCKQSITNGETTLQELCDSGAYEFSQEQIAELEAIENGNVPTQS*	common_virus_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0053	shell	direct	high	920	0.999	GCA_002966695.1_00540
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	530261	530911	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	36784	37434	GCA_002966695_1_1_507	GCA_002966695_1_1_507	+	1901558	.	PDB:3SZ4_A	Exonuclease	MEMYQLKARCSGLADLMVKPKSGNGISATAKSAVRKIVKYDLFGYQDFEGNKYTAKGIALEEQAIKLSGRKRGLPLKKNTERRENDWITGECDIYVPSRRLIIDTKCSWDIGSHPFFADEAKEKAKKAGYDAQMQGYMWLWDCSEAQIDFVLLPTPYDQLSSYDDPNRYIDLVEQIPQEKRITTVTIKRDEKVIEKIKERVEIAQEYYQQLIQEMR*	common_virus_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0054	shell	direct	high	650	0.998	GCA_002966695.1_00541
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	530911	531345	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	37434	37868	GCA_002966695_1_1_508	GCA_002966695_1_1_508	+	1901558	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MARNTNTVILVGHLGSDPEIRQFQNGGQIATFNLAIADDYRDRQGNTVKRTHWIPIVVHGNSADVARQYLQKGSKICVTGKLVQESWQDQNGNNRTALKVATQSFEMLDSKANNETQQPTKDKEKPDPLNAAAEQDGFNDDIPF*	common_virus_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0055	shell	direct	high	434	0.998	GCA_002966695.1_00542
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	531407	532429	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	37930	38952	GCA_002966695_1_1_509	GCA_002966695_1_1_509	+	1901558	.	.	hypothetical protein	MAEENKEIIAYKGFKQDWTCRGYQYEVGKTYEHKGNVEACESGFHACEYPLDVLSYYSPAVSKFAVVKMSGETSKDSDDTKIASAKITIETEINLPEMIKKAVEWIKGKVDWDAAKVSNTGYWSAATNTGYRSVATNTGYRSVATNTGYRSVATNTGDQSAATNTGDWSVATNTGDWSVATNTGDRSVATNTGYWSAVTNTGYRSVATNTGYWSVATNTGDRSVATNTGYWSAVTNTGYRSVATNTGNRSAATNTGNRSVATNTGNQSAAEVSGKQSIAVALGWQSKAKASIDGAIVCVYRNHEGELIHIKASKVGENNIKADTWYTLDEIGKFVEVKDD*	.	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0056	shell	direct	high	1022	0.999	GCA_002966695.1_00543
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	532554	533450	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	39077	39973	GCA_002966695_1_1_510	GCA_002966695_1_1_510	+	1901558	.	PRK00321	recombination associated protein; Reviewed	MYWFRNAIIYQLTKQIDFENIEKQLKECEFTPCGSADVSHFGWSAPLVTSENLAHQANGKILLVAKREEKILPVEVVNRELNKRITALEEKEQRKLKKVERSSLKDDVIATLLPQAFSRIKMTALYIDTLKQLIFVDTASSKTAEDVLALLRKSLGSLPVVPLAFNCAPCEVMTRWVTDTAPDWLILRKEVEIREKEDLGVIHCKQKDVEDEEIIELVQNGLISKLALEWENNLKFILVEDGTLKRLKFDDNIIEKNDDIVKEDVTARFNADFVLMVNVLGKTVDSLIKEFGGIKERL*	mmseqs_cdd	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0057	shell	direct	high	896	0.999	GCA_002966695.1_00544
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	533447	533683	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	39970	40206	GCA_002966695_1_1_511	GCA_002966695_1_1_511	+	1901558	.	.	hypothetical protein	MNLLKSLAKIILQEEIENNKYHFEKLGNENLAKSRRIKELESDNDRLRIKVEQIRQDNLKLRENRPHFKHHKKKGGRK*	.	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0058	shell	direct	high	236	0.996	GCA_002966695.1_00545
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	533680	534039	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	40203	40562	GCA_002966695_1_1_512	GCA_002966695_1_1_512	+	1901558	.	.	hypothetical protein	MNEINIKLPLHKFQDLMISHVRYSLPRHTYIVSETIHDVKTYWSVLSSNTREVITRDINEHLKRWESDRNDAFHKLDYDSWEELFDWINENRSSPSTTATTAKPIVPVLPVINPKQRKK*	.	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0059	shell	direct	high	359	0.997	GCA_002966695.1_00546
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	534047	535213	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	40570	41736	GCA_002966695_1_1_513	GCA_002966695_1_1_513	+	1901558	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MFTYGSICSGIEAVSVAWKGLSKPLWFSEIEPFPCAVLAYHYPNIPNLGDMTTLPEKILNREIPAPDVLVGGTPCQAFSVAGLRNSLDDDRGNLTLTLIHILEAIDYVRYQDGNQPCVLLWENVPGVLSTKDNAFGHFLAGLVQERQPLQPTGRKWTNAGLLHSARTVAWRTLNAQYFGLAQRRKRVFLVASARERSVAQILFERKSLQGHSQSCGKTQQVFTAYTESSFGAFSENTISGTLRQSGGSLGGGSETFVVHGTQDPIISTSTAHCLGRNNGQENVLFDISERRNTVRIYDEITPTLAAKMGTGGNNIPRINRQSIIRKLTPVECERLQGFPDNWTKIPYRNKSIEDCPDSPRYKAIGNSMAVPVIKWIRERLTNYLGERK*	common_virus_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0060	shell	direct	high	1166	0.999	GCA_002966695.1_00547
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	535210	535452	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	41733	41975	GCA_002966695_1_1_514	GCA_002966695_1_1_514	+	1901558	.	.	hypothetical protein	MTAKQIRVGVSPITNQIFVGYVNKKGDTWTTKQDATMEILFAVAQHAMEFGEPIILSEETADGRFVKKYSITVKRIRGEE*	.	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0061	shell	direct	high	242	0.996	GCA_002966695.1_00548
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	535449	535727	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	41972	42250	GCA_002966695_1_1_515	GCA_002966695_1_1_515	+	1901558	.	pfam04448	Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	MSKNNNGWIKCSERLPEPFDTSEELRNLSNRHLIYYTEDDVYWFIGFGWYLLDEKVDEEGGLIPYWQLDELGMIDIEIEVSHWQPLPQPPEE*	mmseqs_cdd	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0062	shell	direct	high	278	0.996	GCA_002966695.1_00549
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	535731	536042	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	42254	42565	GCA_002966695_1_1_516	GCA_002966695_1_1_516	+	1901558	.	.	hypothetical protein	MNIEYEWLLINDLDDEDPEKEEVEKIIKDRVWLEFDRKKRPFYLESSVAEELFIRNHSDWECYEEDEYVFLAIREQGSERYSIFRVSPWYRLEPDVDEIYFDD*	.	hypothetical_protein	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0063	shell	direct	high	311	0.997	GCA_002966695.1_00550
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	536392	537417	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	42915	43940	GCA_002966695_1_1_517	GCA_002966695_1_1_517	+	1901558	.	PDB:1Z19_B	Integrase	MPIRKNKNGVWQIDFTTPSGERVRCSSKTTDKKLAQHLHDKLKHEAWQVEQLNKKPEKTVEQALILLLKDAEHKKDKLTKIQHAKYWRDEIGNKLLSSLTSEDIQNAIPTHVVRTGKILSPATQNRYRSSIMRAINLAKQAGWIDVVPYIAKNSEPKKRIRWITEKEAERLLDSLNLNWMKDVCQFALLTGARMTEILSMTWDKINFANKMAIVTGDIAKSGRGRSLPLSDDAINLIKERMKYQVSPYVFHSGTGKLRDDISRRDFKRALQRANIKNFRFHDLRHTWASWHIQRGTPLMVLKELGGWETIEMVQKYAHLNADHLLSYVNQVKFSSNTRLAR*	common_virus_hmm	common_virus	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0064	shell	direct	high	1025	0.999	GCA_002966695.1_00551
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	CDS	537851	538312	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	44374	44835	GCA_002966695_1_1_518	GCA_002966695_1_1_518	-	1901558	.	PRK10802	peptidoglycan-associated lipoprotein Pal. 	MNKFVKSLLVAGSVAALAACSSSNNDAAGNGAAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVSYGEEKPAVLGHDEAAYSKNRRAVLAY*	mmseqs_cdd	nonviral_gene	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_CDS_0065	persistent	direct	high	461	0.998	GCA_002966695.1_00554
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	tRNA	537624	537696	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	44147	44219	tRNA-Lys	tRNA-Lys	-	1901558	.	tRNAscan-SE score: 87.4	Lys	NA	tRNAscan-SE	.	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote	cenote	tRNA	537525	537597	GCA_002966695.1	CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695.1_CP020012.1	GCA_002966695.1|CP020012.1	GCA_002966695_1_1	GCA_002966695_1_1@C25	44048	44120	tRNA-Lys	tRNA-Lys	-	1901558	.	tRNAscan-SE score: 71.8	Lys	NA	tRNAscan-SE	.	C25	44835	493478	538313	GCA_002966695.1|CP020012.1@region_493479_538313@tool_cenote_tRNA_0001	.	.	.	.	.	.