core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	28327	29076	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	1	750	GCA_002999595_1_9_32	GCA_002999595_1_9_32	+	185932	.	cd07436	PHP_PolX	MRDNHLHTYFSYDSDTDFRDYLEHYDGEIVTTEHLDLSNPYPYNAGSPRDDIPDYESYSRKIAFLNKKYGNRIKKGIEIGYYRPRKKDTLAFLEDKDYDLKLLSVHHNGKFDYLETPVLQLEKMQWIPDYLKELEEAIESIPADVLAHFDYGFRKFNVTVEELKNFELQLRTLFQKMIEHNLAFELNGKSMYLYNHEDIYIYALSLVKELGGTKYSVGSDAHTLEHFRLNFDRIKQILTEFDIDEGMLL*	hhsuite_tools	nonviral_gene	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0001	persistent	direct	high	749	0.999	GCA_002999595.1_01247
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	29162	29425	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	836	1099	GCA_002999595_1_9_33	GCA_002999595_1_9_33	-	185932	.	.	hypothetical protein	MYQSFLHSDITWELHGQEVSVIHGIDDYLLKIQQTYHQSNVQFSCLHTFSTNENRIVTILKNDFGQLSCDIFEFENGLIIREYEYLL*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0002	persistent	direct	high	263	0.996	GCA_002999595.1_01248
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	29496	29948	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	1170	1622	GCA_002999595_1_9_34	GCA_002999595_1_9_34	-	185932	.	PF07997.11	Protein of unknown function (DUF1694)	MTDINKTIMEKSQGGLKLNPDEQRKFLGTFEERVVAECSIDEANSAPIHDHFKEMLQKIILDYQPVTVKISPEVTNQYQIFYLKIAKDLGCKATIVSSNCKNSPFGLVIHSDHPVEIAEKEIAKQFSEFFQTDSTQKTERKTSFWEKLFH*	hhsuite_tools	nonviral_gene	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0003	persistent	direct	high	452	0.998	GCA_002999595.1_01249
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	30124	31428	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	1798	3102	GCA_002999595_1_9_35	GCA_002999595_1_9_35	+	185932	.	COG0148	Enolase [Carbohydrate transport and metabolism]. 	MSIITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYGGLGTQKAVDNVNNIIAEAVIGYDVRDQQAIDRAMIALDGTPNKGKLGANAILGVSIAVARAAADYLEIPLYSYLGGFNTKVLPTPMMNIVNGGSHSDAPIAFQEFMIVPAGAPTFKEALRWGAEIFHALKKILKSRGLETAVGDEGGFAPRFDGTEDGVETILAAIEAAGYVPGKDVFLGFDCASSEFYDKERKVYDYTKFEGEGAAVRTADEQIEYLEQLVDKYPIITIEDGMDENDWEGWKKLTERLGKKVQLVGDDFFVTNTSYLERGINEGCANSILIKVNQIGTLTETFDAIEMAKEAGYTAVVSHRSGETEDSTIADIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDQLGEVAEYRGLKSFYNLSK*	mmseqs_cdd	nonviral_gene	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0004	persistent	direct	high	1304	0.999	GCA_002999595.1_01250
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	31507	32247	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	3181	3921	GCA_002999595_1_9_36	GCA_002999595_1_9_36	+	185932	.	PRK00481	NAD-dependent deacetylase; Provisional	MDKIEELAQIIQSSQNIVFFGGAGVSTESGIPDFRSSNGIYNIELNQHFSAEQLVSHTMFERYPEQFFDFYKKYLIYPNAKPNVAHEYLAYLEKLGKLKAIVTQNIDSLHEMAGSRNVLKIHGSVDRNYCTNCHRFYDLEDFLKLPGIIPYCETCGCVVKPDVTLYEEPLNMEVFSQAIQVISQADLLIIGGTSLVVYPAANLVHYFQGRHLVVINKNNVLQDSQADLVIKGKIGEVLSKAWKVMG*	mmseqs_cdd	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0005	persistent	direct	high	740	0.999	GCA_002999595.1_01251
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	32408	33082	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	4082	4756	GCA_002999595_1_9_37	GCA_002999595_1_9_37	+	185932	.	pfam16264	SatD family (SatD). This family consists of uncharacterized proteins around 220 residues in length and is mainly found in various Streptococcus species. The function of this family is involved in acid resistance.	MMYVALIGDIIESKKIQDRAQAQQKLLQLMKELNQQYQKYLVSPFTVTAGDEFQALFLPNSDMFQIMDQLSMAFAPYEIRFGIGAGDMITEINKEQSIGSDGPAYWLAREAINYVHDKNDYGINHISVSLADEEVGQTINAILAACSFIQSKWTDIQYDVLKQLLAENIYDETFSHKEMAKLLGITPSAFNKRIKASGLKIYLRNKRVAMNLMLNAIEKEEKHV*	mmseqs_cdd	nonviral_gene	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0006	persistent	direct	high	674	0.999	GCA_002999595.1_01252
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	33075	33806	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	4749	5480	GCA_002999595_1_9_38	GCA_002999595_1_9_38	+	185932	.	pfam11750	Protein of unknown function (DUF3307). This family of bacterial proteins has no known function.	MSNLWGFSDYFIQHPILLLTLLAHVLADFQWQSQKMADLKCRKLPYLLLHLAIVFLPLLILSIFFPKNIIYFIAVWLSHVVIDFLKYRLNTFIEIKKLTKQVFIIDQLLHLICIFLFYALLANKINPQWLKNGASVAQTLLFLAIVGKPVNILFKLFFNRYQSKGDNQDTIAGAGAMIGILERFIMALSLIFGQFASVGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMISVLIVFGLLYL*	mmseqs_cdd	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0007	persistent	direct	high	731	0.999	GCA_002999595.1_01253
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	33849	34694	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	5523	6368	GCA_002999595_1_9_39	GCA_002999595_1_9_39	-	185932	.	COG1307	Fatty acid-binding protein DegV (function unknown) [Lipid transport and metabolism]. 	MTWKIVADSGCDYRTIENLAVDTLFESVPLTIQVGNEIFIDNAQLNIDNMMEKMYTTSSASKSACPSPDDYMKAFIGASNIFVVTITGTLSGSYNSAQVAKRLYLEDHPDVNIHIIDTLSAGGENDLIIKKLNLLIGQGLSYEEVIKEITAYQAKTKLLFVLSKVDNLVKNGRLSKLLGAVVGLLNIRMVGEASQDGKLELLQKARGAKKSLIAAFDELIKAGYAGGQIIIAHRNNPKFCQQFSEMVRERFPQAVIEVIPTSGLCSFYAEENGLLMGYEIQ*	mmseqs_cdd	nonviral_gene	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0008	persistent	direct	high	845	0.999	GCA_002999595.1_01254
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	34829	35413	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	6503	7087	GCA_002999595_1_9_40	GCA_002999595_1_9_40	+	185932	.	6O6N_A	TetR family transcriptional regulator	MSERKISKKSLENLKISNQESNRITKESLEISLLQLLEKKELTKITISELVERAGVSRAAFYRNYDSKEEILQEIFQRTVQKITDKLAQFNMRTELYQVWLFLFKEVKKEARILSLAVDYNLEKLLTSAVFDFLEKQNSSRKEASTYMNSFWSSAVVSVLIKWTKDGMKVPAEKIASLGLPLFPHRKNDKLSDK*	hhsuite_tools	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0009	persistent	direct	high	584	0.998	GCA_002999595.1_01255
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	35431	35898	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	7105	7572	GCA_002999595_1_9_41	GCA_002999595_1_9_41	+	185932	.	TIGR02571	"ComE operon protein 2. This protein is found in the ComE operon for ""late competence"" as characterized in B. subtilis. Proteins in this family contain homology to a cytidine/deoxycytidine deaminase domain family (pfam00383), and may carry out this activity."	MATKRLAWDEYFAAQALLIANRSTCKRASVGAVIVKDNKVISTGYNGSVSGTEHCIDHECLIVDGHCVRTLHAEVNAILQGAERGIPKGFTVYVTHFPCLNCTKQLLQVGCKRVVYINRYRMDDYARYLYSEKKVELVHLPIEKVKEAISETDLI*	mmseqs_cdd	nonviral_gene	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0010	persistent	direct	high	467	0.998	GCA_002999595.1_01256
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	35946	36581	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	7620	8255	GCA_002999595_1_9_42	GCA_002999595_1_9_42	+	185932	.	3GW4_B	Uncharacterized protein	MTEEQLQKAWQALFDGQYQLAKQFVYQIDQDSYSTLNLKAYIALEEKDFQLARQVLKDYYAQAMSEKNLEEQHIGLHQLAMVEREEEHFQKAYDLIMAEAAIITEHFPDDVLKASVNLYEQGYLQFKLGNIHLAEELLQETLNLALQTDDFVNHACAYRGLAEVMLAKGDIKMAKFDAQKALACFEKAGDTVGAAGLKDIMAQINSQGRSL*	hhsuite_tools	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0011	persistent	direct	high	635	0.998	GCA_002999595.1_01257
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	36741	38894	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	8415	10568	GCA_002999595_1_9_43	GCA_002999595_1_9_43	+	185932	.	NF040549	cell surface ecto-5'-nucleotidase Nt5e. Members of this family, found in Streptococcus sanguinis and related species, are LPXTG-anchored cell surface proteins. By hydrolyzing pro-inflammatory extracellular ATP in the host, it may blunt immune responses and contribute to virulence. Nt5e has also been called adenosine synthase AdsA.	MKKEKFIIPILSTLLIAPAILAHQVSADAVDPAASTAPVEQVEVPKENQSVAPTIAQGDSAVSPATEASTEKVTEKSENKQVETSVTPADSITPAAQAVAAPTTQSEKDTVILHTNDVHGRIVEEKGVIGDAKLAAVIEQERAKTNQTTLVVDAGDAFQGLPISNSSKGEERANILNKIGYDAMAVGNHEFDFGLDEVKKYKEILKFPLLSANTYVNGARLFEASTIVDKDKNVVGDEFVVIGVTTPETATKTHPRNVQGVTFTDPISEVNKVIEEVESRAKAEGKTYKHYVVLAHLGVDTTTPVEWRGSTLAEALSKNPLLKGKRVTVIDGHSHTVESVTYGDNVTYNQTGSYLHNIGKVTYKSGQILGNPQQISANSVKGVTPDPAIQQLVNKIKEKYDQENAKVVVANSPVELNGNRENVRVRETNLGNVVADALYEYGQTGFSHKTDLAVTNGGGLRETIAKGKPITKGDIIAVLPFGNTITQIKVTGQNIADMFAKSLGSIVQEKDGKPVLDENGQPLLEPSGGFLQVSGAKVYYDTTLPADKRILGIEIKNPETGKYEKLNLAKTYYLTTNDFLAAGGDGYGMLGGAREEGPSMDVAFADYLAKTDLTAYAVVNPNSRTISISTAQYKKLQDQAANQVKPNETGEKELVPAVQTNTHQRTATIPVNVHKQFVTSGQKSLPETGTTDTTFISLLGFVVGLLGLSRFKKAHKE*	mmseqs_cdd	nonviral_gene	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0012	shell	direct	high	2153	1.0	GCA_002999595.1_01258
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	38932	39579	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	10606	11253	GCA_002999595_1_9_44	GCA_002999595_1_9_44	-	185932	.	PRK00220	glycerol-3-phosphate 1-O-acyltransferase PlsY. 	MIKIVFTLIVAYLIGSIPAGLWIGQVFYKKNLREYGSGNTGTTNTFRVLGKKAGIITFIFDFFKGTFATLLPFFLHINGISPLVFGLLAVLGHTFPIFAEFKGGKAVATSAGVILGFSPTFFTYLAVIFFSCLYLTSMISFSSVTAAASAILGVLIFPLFGFLLPRYDVLFTVIVLALALIIIVRHKDNIQRIRMKQENLIPFGLNITKQQPKQK*	mmseqs_cdd	nonviral_gene	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0013	persistent	direct	high	647	0.998	GCA_002999595.1_01259
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	39762	41711	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	11436	13385	GCA_002999595_1_9_45	GCA_002999595_1_9_45	+	185932	.	PDB:4URL_A	DNA-topoisomerase-IV	MAKKEININNYNDDAIQVLEGLDAVRKRPGMYIGSTDATGLHHLVWEIVDNAVDEALSGFGDKIDVTIHKDGSLTVADHGRGMPVGMHAMGIPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGSSVVNALSSWLEVEITRDGTVYRQRFEKGGKPVTSLEKIGKAPKSKTGTKVTFMPDDTIFSTTDFKYNTISERLNESAFLLKNVHLSLTDERTGESVDFHYENGVQDFVSYLNEDKETLTPVLYFEGEEGGFQVEVALQYNDGYSDNILSFVNNVRTKDGGTHETGLKSAITKVMNDYARKTGLLKEKDKNLEGSDYREGLAAVLSILVPEEHLQFEGQTKDKLGSPLARPAVDSIVSDKLTFFLLENGELASNLIRKAIKARDAREAARKARDESRSGKKNKKDKGLLSGKLTPAQSKNPAKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVINTAKAKMADILKNEEINTMIYTIGAGVGSDFSLEDANYDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYIALPPLYKMSKGKGKNEVVEYAWTDGELEDLRKKFGKGAMLQRYKGLGEMNADQLWETTMNPENRTLIRVTIEDLARAERRVNVLMGDKVPPRRKWIEDNVKFTLEESGEVIF*	common_virus_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0014	persistent	direct	high	1949	0.999	GCA_002999595.1_01260
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	41728	42837	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	13402	14511	GCA_002999595_1_9_46	GCA_002999595_1_9_46	+	185932	.	.	hypothetical protein	MFIAVQQNVQQSGFQLSQQWWWLILSLIITVIVGPIIVHRSKNRFDNEKKIEIVGNSISNINNRNGAPEPATSESPIYSNFLLNTLTVENKRSVTQSVTEIELYNIKKEDNNFLDIQYDGGFYDRNQKFVFLAYNNGTKEGQLNKYTVKFIRLGEEPRKAVYETEIIVEKPLIMKLGDIKSLIIYPFDEFVSEFEQNSRLYSLQVTVLDSKGNEIPNLTLVVKYDRSEKRFQNFSRGFAGQGIGEIPLINLIEDTTQKSVTCSQKLTAGANDVNFYILVDRSCSLKYDVAIKSGEKTIKGKEKYSLDIRIPVYKQEKGGFYGDFYIFLQDQKIELNQDVDYNKDLIKSLKSDLIYDKYYAARKFANAKI*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0015	cloud	direct	high	1109	0.999	GCA_002999595.1_01261
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	43134	43868	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	14808	15542	GCA_002999595_1_9_47	GCA_002999595_1_9_47	+	185932	.	pfam19775	Family of unknown function (DUF6261). This family of bacterial proteins is functionally uncharacterized. Proteins in this family are typically between 246 and 334 amino acids in length. Some members are thought to be hemagglutinin-related proteins.	MKLTYGITTLDTKTLDKSEFSQLMTESKEAITAFNKAHKVESIYTSKLEEMSQHLAKFQEGLHRAKASSLVTSLDQADRERDDALGTLTALVRAFSRVKETATKEAYDTLAGLLKNYAGIAAANYEKETEGINHLLQELKKSTYQTALAKLHLEAHVESLMTAQKRFEEAYKERLTELKGKVPSQSKQLRIQLQEIYDFLLDFTAIMTYAYPERSHYADLRDHLNTIRSRYKKRKAVKKVKEAI*	mmseqs_cdd	nonviral_gene	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0016	persistent	direct	high	734	0.999	GCA_002999595.1_01262
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	43888	44709	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	15562	16383	GCA_002999595_1_9_48	GCA_002999595_1_9_48	+	185932	.	pfam04439	Streptomycin adenylyltransferase. Also known as Aminoglycoside 6- adenylyltransferase (EC:2.7.7.-), this protein confers resistance to aminoglycoside antibiotics.	MRTESEMLDLILRTAKVIQADSVALSGSRTNPNAPKDEFQDYDVVYIVDDLAAMVTDLAWLEAFGKRIIEQHNILDHRRLYLMLFEDGNRIDLTLCPKEHIKEWVDSEADFTVLDDPQGLFQPYTPTPKRYWTKPASADDFAKSCNEFWWVSAYVVKGIQRQQFVYAVDHLYGICQKELLKLLTWQVAEEKGVIDVGKNYKYLFQYLPAEKEEEFATLLDFSDKESLIQSLLSTQQFFHKEAQVFSLKTGFPYDKETAEKMIQYTKEKLNLRK*	mmseqs_cdd	nonviral_gene	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0017	persistent	direct	high	821	0.999	GCA_002999595.1_01263
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	44958	47378	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	16632	19052	GCA_002999595_1_9_49	GCA_002999595_1_9_49	+	185932	.	PDB:4FM9_A	DNA-topoisomerase-2-alpha	MGERFGRYSKYIIQERALPDIRDGLKPVQRRILYSMNKDGNTFDKGYRKSAKSVGNIMGNFHPHGDSSIYDAMVRMSQDWKNREILVEMHGNNGSMDGDPPAAMRYTEARLSEIAGYLLQDIEKDTVPFAWNFDDTEKEPTVLPATFPNLLVNGATGISAGYATDIPPHNLAEVIDAVVYMIDHPKAKVDKLMEFLPGPDFPTGAIVQGRDEIKKAYETGKGRVVVRSRTEIEKLKGGKEQIVVTEIPYEINKAVLVKKIDDVRVNNKVAGIAEVRDESDRDGLRIAIELKKDANTELILNYLFKYTDLQVNYNFNMVAIDHFTPRLVGIVPILTSYIAHRKEIILARSRFDKAKAEKRLHIVEGLIRVISILDEVIALIRASENKADAKENLKVSYDFTEEQAEAIVTLQLYRLTNTDVAILEEEQAELREKIAMFSAIIGDERTMYNLMKRELREVKKKFGNPRLSELQDTANAIEIDTASLIVEEETFVSVTRGGYLKRTSPRSFNSSTVDEVGKREDDRLIFVSSAKTTQHLLIFTNLGNVIYRPVHELADIRWKEIGEHLSQTITNFETNEEVIYTELVDNFDEGTYFAVTKLGQIKRVERKEFSPWRTYKSKSVKFAKLKNEDDQIITLSPIKLDDVMLVTQNGYALRFNIEEVPVVGAKAAGVKAINLKKDDVLAVAFIANTDSLYILTQRGALKRMAVADIPVTSRANRGLQVLRELKSKPHRIFQAGPVFGEQSAELDLFSSDHPTAEEEQILSIVSNKGTTYQVNLADLGLSERTSNGSFISDTISDEEVFSANIK*	common_virus_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0018	persistent	direct	high	2420	1.0	GCA_002999595.1_01264
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	47518	48537	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	19192	20211	GCA_002999595_1_9_50	GCA_002999595_1_9_50	+	185932	.	PRK13357	branched-chain amino acid aminotransferase; Provisional	MSVNLDWENLGFSYMKLPYRYLAYYKNGQWEKGELTEDATLHMSESSPCLHYGQQAFEGMKAYRTKDGSVQLFRPDQNAKRLQRTSDRLLMPQVPTDMFVDAVKQVVRANEEYVPPYGTGGTLYIRPLLLGVGDIIGVKPADEYIFTVFAMPVGNYFKGGLTPTNFIVSDKYDRAAPYGTGAAKVGGNYAASLLPGQMAHEKKFSDVIYLDPATHTKIEEVGSANFFGITKDNEFVTPYSPSILPSITKYSLLYLAEHRLGLKAIEGDVPIDDLDRFAEAGACGTAAVISPIGGIQHGEDFHVFYSETEVGPVTRKLYNELTGIQFGDVEAPEGWIVKV*	mmseqs_cdd	nonviral_gene	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0019	persistent	direct	high	1019	0.999	GCA_002999595.1_01265
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	48642	48872	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	20316	20546	GCA_002999595_1_9_51	GCA_002999595_1_9_51	+	185932	.	pfam11184	Protein of unknown function (DUF2969). This family of proteins with unknown function appears to be restricted to Lactobacillales.	MSKKDKKIEIQLADSQVKVGTDQYEGYVLSIGKKVIGQIAEFNGQFAIIKNENVDSFYKKLENAVEKLIETYNLSK*	mmseqs_cdd	nonviral_gene	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0020	persistent	direct	high	230	0.996	GCA_002999595.1_01266
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	49280	50479	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	20954	22153	GCA_002999595_1_9_52	GCA_002999595_1_9_52	+	185932	.	PRK06676	30S ribosomal protein S1; Reviewed	MNEFEDLLNSVSQVEPGDVVTAEVLTVDANQANVAIAGTGVEGVLTLRELTNDREADINDLVKPGETLELLVLRQVVGKDTDTVTYLVSKKRLEARKAWDKLVGREEEVVTVKGTRAVKGGLSVEFEGLRGFIPASMLDTRFVRNTERFVGQEFEAKIKEVDPKENRFILSRREVVEEKAAAARAEVFSKLAVGDIVTGKVARITSFGAFIDLGGVDGLVHLTELSHERNVSPKSVVSVGDEIEVKVLDLNEEEGRVSLSLKATTPGPWDGVEQKLAAGDVIEGTVKRLTDFGAFVEVLPGIDGLVHISQISHKRVENPKDVLKVGQEVTVKVLDVNADAERVSLSIKALEERPAQEDSQKEKRQSRPRRQKRQEKRDFELPETQTGFSMADLFGDIEL*	mmseqs_cdd	nonviral_gene	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0021	persistent	direct	high	1199	0.999	GCA_002999595.1_01269
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	50700	51104	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	22374	22778	GCA_002999595_1_9_53	GCA_002999595_1_9_53	+	185932	.	cd02883	"Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and ""house-cleaning"" enzymes. Substrate specificity is used to define child families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required. This superfamily consists of at least nine families: IPP (isopentenyl diphosphate) isomerase, ADP ribose pyrophosphatase, mutT pyrophosphohydrolase, coenzyme-A pyrophosphatase, MTH1-7,8-dihydro-8-oxoguanine-triphosphatase, diadenosine tetraphosphate hydrolase, NADH pyrophosphatase, GDP-mannose hydrolase and the c-terminal portion of the mutY adenine glycosylase."	MPVKLIAHTLIEKDGKYLLIKRSKIKRGSPNMYPEYWDIPGGSVEEDELPREGAVREAMEEVNQKVQLSSILHEDSCYDDTKGVVFTRLVYKVNLLEYREIKLDLEEHTAFRWIRALSDMKGEKTVPYLKDILK*	mmseqs_cdd	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0022	persistent	direct	high	404	0.998	GCA_002999595.1_01271
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	51236	52219	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	22910	23893	GCA_002999595_1_9_54	GCA_002999595_1_9_54	-	185932	.	PRK00066	L-lactate dehydrogenase; Reviewed	MTLTKQHKKVILVGDGAVGSSYAFALVNQGIAQELGIVDIFKEKTEGDAEDLSHALAFTSPKKIYSAEYADAHDADLVVLTAGAPQKPGETRLQLVEKNLRINKDVVTKIVASGFNGIFLVAANPVDILTYSTWKFSGFPKERVIGSGTSLDSARFRQALAEKLDVDARSVHAYIMGEHGDSEFAVWSHANVAGVNLENYLQDVENFNAAELVDLFEGVRDAAYSIINKKGATFYGIAVALARITKAILDDENSVLPLSVFQEGQYPGVTDCYIGQPAIVGAHGIVRPVNIPLNDAEKQKMQASAKQLKDIINDAFSKEEFASAAKN*	mmseqs_cdd	nonviral_gene	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0023	persistent	direct	high	983	0.999	GCA_002999595.1_01272
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	52419	54866	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	24093	26540	GCA_002999595_1_9_55	GCA_002999595_1_9_55	+	185932	.	PDB:4FM9_A	DNA-topoisomerase-2-alpha	MQDNNLVNVNLTSEMKTSFIDYAMSVIVARALPDVRDGLKPVHRRILYGMNELGVTPDKPHKKSARITGDVMGKYHPHGDSSIYEAMVRMAQWWSYRHMLVDGHGNFGSMDGDGPAAQRYTEARMSKISLEMLRDINKNTVDFADNYDSSEREPLVLPSRFPNLLVNGATGIAVGMATNIPPHNLSETIDAVKLVMDNPDVTTHDLMEVLPGPDFPTGALVMGKSGIHRAYETGKGSIVLRARTEIEETKSGRERIVVTEFPYMVNKTKVHEHIVRLVQEKRIDGITAVRDESNREGVRFIIEVKRDASAHVILNNLFKLTQMQTNFSFNMLAIQNGVPKILSLREILLAYIEHQKEVVTRRTVFDKEKAEARAHILAGLLIALDHIDEVIRIIRNSETDAEAQAELMARYKLSERQSQAILDMRLRRLTGLERDKIQSEYDDLMKLIADLADILAKPERVVAIIKEELEEIKRKFSDERRTELIVGEVLSLEDEDLIEEADVLITLSNKGYIKRLNQDEFTAQRRGGRGIQGTGVKDDDFVRELVSTSTHDHLLFFTNKGRVYRLKGYEIPEYGRTAKGLPIVNLLKLDEGETIQTIINVQAEHDDDSYLFFTTRYGVVKRTSVTEFANIRQNGLKALNLKDEDELINVFLTNGQADIIIGTKMGYAVRFNESQVRNMGRAATGVRGVNLRAGDHVVGASVISDDQEVLVITEKGYGKRTLASEYATKSRGGKGMKTANITEKNGPLAGLMAVNGDEDLMIITNTGVIIRTNVANISQTGRATLGVKVMRLDKGAQIVTFTSVAAENEKEVDEG*	common_virus_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0024	persistent	direct	high	2447	1.0	GCA_002999595.1_01273
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	54887	55630	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	26561	27304	GCA_002999595_1_9_56	GCA_002999595_1_9_56	+	185932	.	cd06165	Sortase domain found in class A sortases. Class A sortases are membrane-bound cysteine transpeptidases distributed in Gram-positive bacteria (mainly present in Firmicutes). They perform a housekeeping role in the cell as members of this group are capable of anchoring a large number of functionally distinct surface proteins containing a cell wall sorting signal to an amino group located on the bacterial cell wall. They do so by catalyzing a transpeptidation reaction in which the surface protein substrate is cleaved at a conserved cell wall-sorting signal (Class A sortases recognize a canonical LPXTG motif, X can be any amino acid), and covalently linked to peptidoglycan for display on the bacterial surface. The prototypical sortase A protein from Staphylococcus aureus (named Sa-SrtA) cleaves the amide bond between threonine and glycine residues of the canonical LPXTG motif in a wide range of protein substrates with diverse functions that can promote bacterial adhesion, nutrient acquisition, host cell invasion, and immune evasion. Next, it catalyzes a transpeptidation reaction by which the proteins are covalently linked to the peptidoglycan precursor lipid II.  SrtA is therefore affects the ability of a pathogen to establish successful infection. SrtA contains an N-terminal hydrophobic segment, a linker region and an extra-cellular C-terminal catalytic domain. The hydrophobic segment functions as both a signal peptide for secretion and a stop-transfer signal for membrane anchoring. The catalytic domain contains the catalytic TLXTC signature sequence where X is usually a valine, isoleucine or a threonine. The gene encoding SrtA is generally not located in the same gene cluster as its substrates while the gene encoding SrtB is usually clustered in the same locus as its substrate.	MSSTRTKHNKRKNILINIIATLLIIVALALIFNSSIRNMIMVWHTNRYQVSNVSKDKITQNKKAKTSFNFDKVKSLSTEDVINAQWKAQQLPVIGGIAIPELSMNLPIFKGLDNVGLYYGAGTMKETQQMGKGNYALASHHVFGITGASNMLFSPLDRAKTGMKIYLTDKEKIYTYSITSVENVAPDRVDVINDREGVNEVTLVTCEDAAATSRTIVKGTLEGETSYKDAPKEILNAFSKTYNQMQL*	mmseqs_cdd	nonviral_gene	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0025	persistent	direct	high	743	0.999	GCA_002999595.1_01274
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	55834	57150	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	27508	28824	GCA_002999595_1_9_57	GCA_002999595_1_9_57	-	185932	.	PRK07251	FAD-containing oxidoreductase. 	MLIYDLIVIGFGKAGKTLAAKMATQGKKVALIERSKTMYGGTCINIACIPTKTLLVAAEKELSFEEVMAEKNAVISRLNGKNYVAISSAGVDIIDAEAHFLSNKVIEIVAGDEKQEITAENIVINTGAISNILPIPGLTTTKNVYDSTGIQNLDRLPKSLGILGGGNIGLEFAGLFNKLGSKITVLDAADTFLPRVEPSIATLAKQYMTEDGIEILQNIYTQEVKNDGEEVLVIAKNETFRFDALLYATGRKPNIEPLKLENTDIQVTDRGAIQVDKHCQTTVPGVFAVGDVNGGLQFTYVSLDDFRVVFNYLAGDGSYTLENRKHVPTTMFITPPLAQIGLTEAQAKEQGLPYATKEIPVAAMPRGHVNADLRGAFKAVVNTETKEILGATIFSQGAQEIINILTVAMDNKIPYTYFTKQIFTHPTLAENLNDLFAI*	mmseqs_cdd	nonviral_gene	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0026	persistent	direct	high	1316	0.999	GCA_002999595.1_01275
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	57399	58580	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	29073	30254	GCA_002999595_1_9_58	GCA_002999595_1_9_58	-	185932	.	PDB:1XO0_A	Recombinase	MKYIKSKYPNIYTYETNKGKRYYIRRSFVFQGKKKEITKSGMKAISEARAELAKIEKSIDEQTIAINPNITVEEYWKKFYEKRVESGRWTPNTEVYYKSTFKLHVLPFWGKTKLKNLSRNEYEKHIASLLKVRPKASVRIIHSCFMTMLNDAVMNGNILANRLNGIYIGDSLIAKKNKRITLDQFQIWLQEAAKTMDKTFFCLTYLAIFGLRRGEIFGLRHCDVSINVNGRAVLHLQDSRGNHTQSGRHGLKTKSSERWVTLDDTGTELLLHLMTNAENIKKKLNIIKEVEWDYISIDQKGKLINPNKLNKEFEKVNSVVGFRVSPHMLRHFFTTQSIIAGVPMEALSQSLGHTKMYMTDKYNQIHDELSAQVSDAFIAQVSPRNSPTNLHIL*	common_virus_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0027	cloud	direct	high	1181	0.999	GCA_002999595.1_01276
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	58755	59381	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	30429	31055	GCA_002999595_1_9_59	GCA_002999595_1_9_59	-	185932	.	PFAM:PF03843.12	outer-membrane-protein	MQDFIIFFTLLLFGVSLVFFILSFFKKFNSFKWPSILSMFITSILFFVLIVNYTYEARTSDSSLQTSETSSAEESDISSSEESSTSETSYSSSSEQAFNPNDYEVPDFGAWNHDQLEQSKKVQITGKVLQNMKRDSSYYLRVAIDDDYDKVVMIEISSYMYKDVIAENDNVTFYGLAKGLTSYESTLGKEITLPLMYAHRYTVNSYGK*	phrogs_hmm	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0028	cloud	direct	high	626	0.998	GCA_002999595.1_01277
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	59407	60177	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	31081	31851	GCA_002999595_1_9_60	GCA_002999595_1_9_60	-	185932	.	PDB:2FJR_A	Repressor-protein-CI	MNSQNKEIFANNLAYYMNKKGIDRNTLCSDLGLKYTTVRDWLKGITYPRIGKIELLANYFGVQKSDLIENKETLSVSNASRIIKDINDNLIKLEKPRQEKVLNFTQGQLAEQGQEGYIPKAISIHKEIQEPDIEYKVYEKLSAGDGYEYLEDRNYDVVYFNKYIPHDFASWVYGDSMEPKFLNGSVALIKETGWDYDGAVYAVDWDGQSYIKKVYKEKDGLRLVSLNDKYDDKFAKWEEEPRIIGKVIGNFMPMEK*	common_virus_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0029	cloud	direct	high	770	0.999	GCA_002999595.1_01278
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	60345	60551	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	32019	32225	GCA_002999595_1_9_61	GCA_002999595_1_9_61	+	185932	.	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain  [Transcription]. 	MQKMTLKTLRASKNWRQSDAAKALGVSVDTWGHWERGDTEPSVSRAYQIASVFGISVDDIIFLPDIAV*	mmseqs_cdd	nonviral_gene	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0030	cloud	direct	high	206	0.995	GCA_002999595.1_01279
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	60657	60914	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	32331	32588	GCA_002999595_1_9_62	GCA_002999595_1_9_62	+	185932	.	PFAM:PF12964.6	HTH-DNA-binding-protein	MGEIEASIVKWIKDLVTDVFNRLLAVELHNDGFRELMNQEETCRFLGISADTFRDNYRYLDGFPKELPAKRWSKRAIKEWLKNQI*	phrogs_hmm	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0031	cloud	direct	high	257	0.996	GCA_002999595.1_01280
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	60954	61178	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	32628	32852	GCA_002999595_1_9_63	GCA_002999595_1_9_63	+	185932	.	PFAM:PF11753.7	nucelotide-kinase	MKTDNINKPSHYQGAHGLEAIDVVRNFAGGLNAEQGFYWGNMIKYVLRFQKKNGVEDLKKAKKNLEWLIESIGG*	common_virus_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0032	cloud	direct	high	224	0.996	GCA_002999595.1_01281
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	61182	61412	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	32856	33086	GCA_002999595_1_9_64	GCA_002999595_1_9_64	+	185932	.	.	hypothetical protein	MQNYEQRHLIMDWERDHYRLGTKFKNKLAKRSVEAVKLELANLTREWDSVTFSVVPKGAMKIESDKVTIFKKGEVK*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0033	cloud	direct	high	230	0.996	GCA_002999595.1_01282
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	61409	61963	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	33083	33637	GCA_002999595_1_9_65	GCA_002999595_1_9_65	+	185932	.	.	hypothetical protein	MKYKLGDEVYLKGVITSVNFCAEINYPYEVKTADVFVLAAEQHLEPINKSELGHAEEAPRYLRNVLARLRELPEHDRNIWLKGIMGEFGKDFSYVKWREAYEQGKFDGAVEAEKSNKVVIVEQKKRYVVTDGNHLYLKKCQEDVEIVILVDDMPGTMDDVKKFDSKDEAQEIADVLGWKVQEVE*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0034	cloud	direct	high	554	0.998	GCA_002999595.1_01283
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	61963	62136	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	33637	33810	GCA_002999595_1_9_66	GCA_002999595_1_9_66	+	185932	.	.	hypothetical protein	MDLTLGSNIRELVLAIGEIIVESNGKITTVELEIPDQSFFLEITVKPKEEVQDESKI*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0035	cloud	direct	high	173	0.994	GCA_002999595.1_01284
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	62120	62488	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	33794	34162	GCA_002999595_1_9_67	GCA_002999595_1_9_67	+	185932	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MNPKFRVWDKLRKRMSTVDRIYFDTEGVQLRDNSGLYWRDFRDIILMQSTDLKDKNSTEIFEGDVLKNNDYPNQTFICKHSMLQASFQAESLNGLLTLSLWKDEERDWQVLGNIYENPELME*	mmseqs_cdd	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0036	cloud	direct	high	368	0.997	GCA_002999595.1_01285
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	62493	62660	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	34167	34334	GCA_002999595_1_9_68	GCA_002999595_1_9_68	+	185932	.	.	hypothetical protein	MKEDNGLLEAQLKVGKVVLEQMLELIYRPNMRGVVMPFELNGYKYNISIVREDNA*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0037	cloud	direct	high	167	0.994	GCA_002999595.1_01286
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	62657	62965	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	34331	34639	GCA_002999595_1_9_69	GCA_002999595_1_9_69	+	185932	.	.	hypothetical protein	MTLKDRVENLEALHIVQKRGLANTQLWLVFVSFIIFLLVIGMIAGYGKQQTQIKDLQTQLERVTNEQKHVNQRQDVMINKFNQMYYEYQHEKITGKKDFPGG*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0038	cloud	direct	high	308	0.997	GCA_002999595.1_01287
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	62969	63154	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	34643	34828	GCA_002999595_1_9_70	GCA_002999595_1_9_70	+	185932	.	.	hypothetical protein	MKIEMMLGIALLISIGILITSITINAAIINRLREKNRYYRSAKYRHKMFEQELILRNKIEK*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0039	cloud	direct	high	185	0.995	GCA_002999595.1_01288
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	63168	63401	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	34842	35075	GCA_002999595_1_9_71	GCA_002999595_1_9_71	+	185932	.	.	hypothetical protein	MTKNKLSDLNDHLFMTLERLGDEDLSNEELEKEIERSKAISTVAGKIIDNARLVLDAQKTAAEYNGKRTVNLELLNG*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0040	cloud	direct	high	233	0.996	GCA_002999595.1_01289
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	63394	63975	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	35068	35649	GCA_002999595_1_9_72	GCA_002999595_1_9_72	+	185932	.	PFAM:PF05551.10	homing-endonuclease	MAKLLTTEQHNYLVAIQKGKTAKEIVRLMNTKFGLSLVAKQIKTYRQNHGLHSGLTGRFPKGHVPYNKGKKLPGMRNSGQFQKGHSPKNWMPVGSIRYTTDGYPKIKVAEPNVWELLHRKTWADHHGPIPKGHSVVFLDGNKTNYDISNLACLSRNEVARMNQNHWFSSDAELTKTGIGLTKLTNKIREVEKQ*	common_virus_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0041	cloud	direct	high	581	0.998	GCA_002999595.1_01290
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	63972	64454	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	35646	36128	GCA_002999595_1_9_73	GCA_002999595_1_9_73	+	185932	.	PFAM:PF05565.10	resistance-protein	MSTLYELTGQYLAIYEMDIDDETKQDTLASMDWEDDFVNKAEGYAKVIKNLEADLPGLDEEIKRLQDRKSALKNKIDTLKTNLQTAMEVTGNEHIKTSLFSIAVQNSRASVIVDEEKLPKKYLVKKVTVSPDKKSLYELLNEGKKIKGAALQENRSLRIR*	common_virus_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0042	cloud	direct	high	482	0.998	GCA_002999595.1_01291
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	64454	64819	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	36128	36493	GCA_002999595_1_9_74	GCA_002999595_1_9_74	+	185932	.	.	hypothetical protein	MGLVNKTRITDNLAVIIGNQHIDVIATEGFPFDVQIRFIKTDDAQLDDGSGKKVFTPEYQMAFAAAYKGKSAFFSNTEDIKSFTKQLKEIKELFEFATLNKQTWFDTASFDGVLSQKVGSL*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0043	cloud	direct	high	365	0.997	GCA_002999595.1_01292
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	64816	65280	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	36490	36954	GCA_002999595_1_9_75	GCA_002999595_1_9_75	+	185932	.	PF07066.11	Lactococcus phage M3 protein	MRILSIDPSSNRIETSTTGIVLLDNAQLVDYWVVPFGAQNFKNWFKSTGRSLEFDIVVVEKFEVRDNDYSRDNSVVETIAAIELCYPDLVLQRNAGYQTDIPNDLLKVLGLWSFDKSHHNDVRAAARLGLFYAQRNDIEEVIVDIGNRITQMAG*	hhsuite_tools	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0044	cloud	direct	high	464	0.998	GCA_002999595.1_01293
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	65240	66424	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	36914	38098	GCA_002999595_1_9_76	GCA_002999595_1_9_76	+	185932	.	PDB:1Z3I_X	Recombination-ATPase-helicase	MWTLAIELRKWQAEAVKRSDRDCPGIFLEAYGGRGKTICAFEIAKHKGAKKVLVINNRLAILNGWNSTYQKLGYNTDFELETMTDRRLQNRLASGESIECDVFIVDEWQNMSSDANVKAYRKVKRSYTVGLSATPIRKKGQNFYPLEKTFFGAAEPNQKENWQLAHGKMKYSKFSYSKQEWDDFRDYESYVANLPNFFRWEDVEEIEEAEENNGFEVIFEPVWCLTANPEELEQFRKLNIVGKDGKYAMAKQTFGRKTFERYLIQTGFEVDFPKLKAVNADTPMLLQLDLLLAKNKEMLIVSKSKQIVEIIYERHPEIGIWTGDRKEQVEKTNLVATSQVLGVGVDGLQHKFKMIVVLDPVSPSDGDYDDYRQLLWRVTGSRQQHDVRVIEFYF*	common_virus_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0045	cloud	direct	high	1175	0.992	GCA_002999595.1_01294
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	66435	66650	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	38109	38324	GCA_002999595_1_9_77	GCA_002999595_1_9_77	+	185932	.	.	hypothetical protein	MRIKKIISQYRRDFTAEYECEHCGFTKIDGGYDDANYHNNVVPNMECEKCGKKAESNYRPLATKYPEGYQI*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0046	cloud	direct	high	215	0.995	GCA_002999595.1_01295
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	66662	66976	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	38336	38650	GCA_002999595_1_9_78	GCA_002999595_1_9_78	+	185932	.	.	hypothetical protein	MKTNQEFIVLRRKETGSFLKLFKDRGTLAYEAEYTDNLQNALFMSLEKYEEDKMQFKSMAKMFGCEVVKVKATYELTYPNGSEVREIEKQPDKLTRDFLRGLFD*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0047	cloud	direct	high	314	0.997	GCA_002999595.1_01296
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	66988	67680	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	38662	39354	GCA_002999595_1_9_79	GCA_002999595_1_9_79	+	185932	.	pfam04404	ERF superfamily. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to ERF.	MGKIFGVLQSIQSELVAPKGQYNSFGKYNYRSAEDILEALKPILKKHKAAITMSDDIVYIEGRHYVEASVTLYAEGEAIGSKALAREEETKKGMDGSQITGTASSYARKYALNGLFAIDDNEDADSDEYQNQNKSTTKSEPAAKPDQKTSNSQQTKLAPSAKTKKITGAQAKKLREDIKNIAEASGGPVNTVGVWFIGQLGVDKIENIPADRLKEAQKLITKTKKVKGIK*	mmseqs_cdd	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0048	cloud	direct	high	692	0.999	GCA_002999595.1_01297
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	67680	67889	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	39354	39563	GCA_002999595_1_9_80	GCA_002999595_1_9_80	+	185932	.	PF06289.11	Flagellar and Swarming motility proteins	MIELTQMQHYPQKNIWKEKPIFVNAYRVESVAIDFREGNTVITFGKDDFIVVKESYGYVLGKMKEILND*	hhsuite_tools	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0049	cloud	direct	high	209	0.995	GCA_002999595.1_01298
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	67882	68274	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	39556	39948	GCA_002999595_1_9_81	GCA_002999595_1_9_81	+	185932	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MINNVVLVGRMTRDAELRMTQSNTAVASFTLAVNRPFKNQNGEREADFINCVIWRQQAENLANWCKKGALVGITGNIQTRNYENQQGQRVYVTEVVADNFQLLESRSQQQSSNNNLANNPMDISDEDLPF*	common_virus_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0050	cloud	direct	high	392	0.997	GCA_002999595.1_01299
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	68295	69116	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	39969	40790	GCA_002999595_1_9_82	GCA_002999595_1_9_82	+	185932	.	PFAM:PF09250.10	Bifunctional-DNA-primase-polymerase	MKEYALAYQKKGFSVIPIVPNGKQPAIKFADKPAMTAEEIENYWNQHPNSNIAVRTDKFFVIDIDLHGKHNGYESLANWDKIDLLIPTLQAKTASGGKHIFYFKHPDVSMTQMIGFLPGVDIKAHPNNYVLVAPSKTAKGQYTWDMDKSKEGGTMVTASRDLVLAIKQEYLKKNNRSDLDDIYYQMASGNGKRNRTTEVLEMIVCGFGDEGSRNDTAAKFAGTLLARAVEPQYVLQLAQIANNHSMEPLSDRELKRTVESMITKHLRGGERHW*	common_virus_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0051	cloud	direct	high	821	0.999	GCA_002999595.1_01300
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	69100	70491	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	40774	42165	GCA_002999595_1_9_83	GCA_002999595_1_9_83	+	185932	.	PFAM:PF04735.11	DNA-helicase	MSVIGEVVNISIKQFSRRKKKILDENGEQIEIESIVADSPRNVLLAMKSDNKLNDFLRHNEFTGEHEIVADVKLDAINLRKGQLPSAFESYLSVYLENHFKTVFKASALRDGIEAFFAEKTYNPVQEYMETAYDSWDHKERINQVFQTWLGAEDSIYVQKIAEMFFVGAVAKVFNPWVKFDYVLDLVGGQGAGKTTFLQKIAGDWYTDSAKDFMDKDNYEIMLKSLIVNDDEMVASRKTTFDELKAFVTKTELSFRRSYGRRAEKYPKNFVIARTSNKIEYLGDKTGERRFMPIKVNAENQFVKPFDMTDKDVAQLWGEAVAIYKKGFDLTFDDDFEDELAVYKEQFTYRDEVESQIYDYLDMLVPEDWDAMTVAQQHQYTWCYFNNGTYRDEAGNAYVGTELQGSVSAKQILKNVFDIDSARGERIARKIKLIMDNNIDFEYKIRKINGKSIRAYFRKNIQK*	rep_hall_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0052	cloud	direct	high	1391	0.999	GCA_002999595.1_01301
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	70858	71004	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	42532	42678	GCA_002999595_1_9_84	GCA_002999595_1_9_84	+	185932	.	.	hypothetical protein	MQYKVIVYFDNMVDEILEFKTEGAARKCFAQLKNKYSGQRLYKVEMRR*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0053	cloud	direct	high	146	0.993	GCA_002999595.1_01302
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	71006	71203	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	42680	42877	GCA_002999595_1_9_85	GCA_002999595_1_9_85	+	185932	.	.	hypothetical protein	MTKIPYTKESARKLWTEARDKYQMQLDSKTRKNSHSHEMHETILEDRWLKYRIRFCNDRIEELEV*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0054	cloud	direct	high	197	0.995	GCA_002999595.1_01303
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	71207	71545	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	42881	43219	GCA_002999595_1_9_86	GCA_002999595_1_9_86	+	185932	.	.	hypothetical protein	MSYDLEILVKIENGDYICIAEPEYSSPTYNLGTMFRKAMRWDFKQGVVYNIDEIFENIESGISELERFPEKYVQYEPENKWGTVNGALEVLKSLKNCILEQDIDIKYLYMRW*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0055	cloud	direct	high	338	0.997	GCA_002999595.1_01304
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	71549	71683	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	43223	43357	GCA_002999595_1_9_87	GCA_002999595_1_9_87	+	185932	.	.	hypothetical protein	MTRPKRYPYSKNQWEESTSKIYTWDGVTYAEFPQLRNRITGEVK*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0056	cloud	direct	high	134	0.993	GCA_002999595.1_01305
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	71680	72075	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	43354	43749	GCA_002999595_1_9_88	GCA_002999595_1_9_88	+	185932	.	PFAM:PF16475.4	site-specific-recombination-directionality-factor-RDF	MKNKIKLLVVLVASVSLLLAGCRKADRVSYNLSREADDLNITRKVTVINSITNKILFQVTGNMSIEYNSKTKQLNVIALGNKGEYKKHIIGISDNVSYVVEDVTGVKGVDTKYRMYFNPDMVIPIDPKLSK*	phrogs_hmm	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0057	cloud	direct	high	395	0.997	GCA_002999595.1_01306
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	72149	72556	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	43823	44230	GCA_002999595_1_9_89	GCA_002999595_1_9_89	+	185932	.	pfam07374	Protein of unknown function (DUF1492). This family consists of several hypothetical, highly conserved Streptococcal and related phage proteins of around 100 residues in length. The function of this family is unknown. It appears to be distantly related to pfam08281.	MNKVEAILTSLKHIDTYIDSLIRRRDKIEASLLSTAKWSADKVKGGAQRKQDDIYVELITVKDDIEKKSVEAIRLRAELESYIDAVADYQSRNLLSMLYIEHIDRYDICEQEQYDMSTFYRKLAKAKQLLANECE*	mmseqs_cdd	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0058	cloud	direct	high	407	0.998	GCA_002999595.1_01307
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	72873	73208	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	44547	44882	GCA_002999595_1_9_90	GCA_002999595_1_9_90	+	185932	.	PDB:5H0M_A	HNH-endonuclease	MRPKKLSIVNGRRVQIDYDSRKEEYNSYNKTRWQYDKKVKRFYNSPIWVETSKQVLLQNDYICAMCGGEATMTDHIISVKKDWSKRLDWNNLQPSCKACNDAKAVRERTGN*	common_virus_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0059	cloud	direct	high	335	0.997	GCA_002999595.1_01309
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	73226	73693	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	44900	45367	GCA_002999595_1_9_91	GCA_002999595_1_9_91	+	185932	.	PFAM:PF05119.11	Small-Terminase	MGRNMKVVAATKKHLTKEEKEKRKEIEEKASDGLAMLQATPPDYLNATAKREYRRIIKDLRNLPIRNLDRAILENYCTWYAVYREVVAKLDKHGYVIFDEEKGWISNPLILTLEKATANIRSSASQLGLTVDSRMKMFVPKTEEKKVSIFDKFGG*	hallmark_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0060	cloud	direct	high	467	0.998	GCA_002999595.1_01310
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	73697	73912	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	45371	45586	GCA_002999595_1_9_92	GCA_002999595_1_9_92	+	185932	.	.	hypothetical protein	MKTLNERFPEVKFDSCSEIRVLKNDEEIIGFHKKWWGGENIRISRSELEELLKGNALAWGDGEYSRAIALE*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0061	cloud	direct	high	215	0.995	GCA_002999595.1_01311
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	74144	75679	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	45818	47353	GCA_002999595_1_9_93	GCA_002999595_1_9_93	+	185932	.	PFAM:PF03354.14	Large-Terminase	MPDVKTGETYPLARFQKFIIASLYGWRKKADTSIRRFRKAIVSVARKNGKTILIAGVLLYEFLFGRNPALSRQLFCTANDRTQAKIAWTMAKKQLEALRNKYADIRKNTKVMRDELVNKKDESYIRALSRDTGAVDGFEPYVGVLDEYAASKTDEMLELLVSGQGQLDTPLILIISTAGLDLNVPMHTVEYQYASRILDEEIEDDSYFAFIAEQESVDEIKEEESWIKSNPILEVEALREKITNYLRDRYKTALETGGLNKVLVKNFNMWRQSSEESYIDKQTWDGAKTDKPDTKKRRVWLGVDVGRVSDLFSITPFAQMDDYWYIDNFSFVATKYGLAAKEKRDGVSYTDLERMGYCEITTLESGVIDDERVLEKMEEMIYENDWEVQAICYDPYQFGSLLAMIEKRHPEWPLIQVSQTTMVLNMPTKQFRDDMKLGKIKHSGNPLLTMAFNNAFIKTDNNGMRIDKNKNSNKIDPADAGLNAYAVCYLEPFDGSGCWTNEKIMESESLF*	hallmark_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0062	cloud	direct	high	1535	0.999	GCA_002999595.1_01312
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	75679	75837	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	47353	47511	GCA_002999595_1_9_94	GCA_002999595_1_9_94	+	185932	.	PFAM:PF06341.10	membrane-protein	MKWFFNNIHTLFLIAAMFCVGYGVFLVNTAVGFIVTGLMLFAVAIYIDRNGR*	phrogs_hmm	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0063	cloud	direct	high	158	0.994	GCA_002999595.1_01313
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	75856	77082	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	47530	48756	GCA_002999595_1_9_95	GCA_002999595_1_9_95	+	185932	.	CDD:TIGR01537	Portal-protein	MSFFQSLSSKVSYDDYVSSVLSGNSAPLYVGISALKNSDILTATSIIAGDIARFPLIKKDLAGNVIQDDDLNYLLNVKSTKNVSAREWKFAMAVNAILTGNSYSRILRDPKTNKALQFQFYRPSETTVEETDDHEVIYTFIDRLTGNQIACTSDNVVHWKFFSHDTILGRSPLLSLADEIALQDGGTQTLIKFFRDGFSSGILKLKGSQLNAEARKKARMDFEKMREGSIGGSPLVFDDTQEYEPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMADYVSNDLPFYFDAITSETALKVLDATERKLYRIEFDTRKVTGLSSEEVRNLVKDQLLTPNQGLEQLGLPKSDDPNMDRYQSSLNYVFLDKKEEYQAMKGGETGNAKKNQDEGAADSQ*	hallmark_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0064	cloud	direct	high	1226	0.999	GCA_002999595.1_01314
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	77039	77713	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	48713	49387	GCA_002999595_1_9_96	GCA_002999595_1_9_96	+	185932	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MPKRIKMKGPLIPNNSQEAYDYFGLEAVSARSIAEALPEDNSDIVLEVNSTGGLVTVGSEIYTTLRNYAGKVTAEITGMAASAASVAVMGADKVIISPTAQMMIHKALFSYVSGNSDDLDKASNALKASDQAIVNAYVAKTGMSEDDIMSLMKAETYMSAQDAVDKGFADEIMSFDDVEAVASIGNGILPQAVIDDFYANRSKRKSEIQNMLREIEKEEILQGL*	common_virus_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0065	cloud	direct	high	674	0.999	GCA_002999595.1_01315
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	77751	78929	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	49425	50603	GCA_002999595_1_9_97	GCA_002999595_1_9_97	+	185932	.	PFAM:PF06673.10	Major-Capsid-protein	MFDEKIKELQATIANLNSTIASKTAEVKAALNADDLDKARTIKAEIENAKADLASAKTDLKLFEDMMNVGGAEGKAGQKVEPEEMSYRDKVNAFLKSKGAVAHEGLRFGETRDEVLIPLNDIVPKTDGVLKTNTKPVTSEELVTTPLREVKTVVDLKQFTNVHKTKKGSGKYPILKKATSRMHSVEELEKNPALAKPEFENVPWEVKTYRGAVPISQESIDDADVDVLALIAEQIGEIKVNTTNYAIAEVLKTFEAKTVTNLDELKAIINVALDPAYQVSFEASQSFYNLLDTLKDKNGRYLLQDSIVSPSGQVALGKVINVLSDETLGAATEAKAFVGDSKRGVLFVDRLEIGLRWAENDIYGQYLQAVMRFDVKKADAKAGYFVTFTPAP*	hallmark_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0066	cloud	direct	high	1178	0.999	GCA_002999595.1_01316
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	79075	79377	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	50749	51051	GCA_002999595_1_9_98	GCA_002999595_1_9_98	+	185932	.	CDD:TIGR01560	uncharacterized-phage-protein-(possible-DNA-packaging)	MAVSKEYLDKVKLYCKIDYDFEDSLLESMIESVIEEICFAIEKNSTSESFKGDAKFDLAVMKQVKEEYEHRGLSADTERYPLANGVLNIIHQLRLRGDSQ*	hallmark_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0067	cloud	direct	high	302	0.997	GCA_002999595.1_01317
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	79374	79742	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	51048	51416	GCA_002999595_1_9_99	GCA_002999595_1_9_99	+	185932	.	PDB:2KZ4_A	Head-tail-adaptor	MITRKMNTRITIFKKTGGQNEDGEVIDSLKVDVLTCWAEVQRTSVKDFKAGGKTYVGELAQNGQKPLESFKDIKVFLIRYMPKLPFDNSMYINFNDFEYKITEVEVDYTSKDIIMIKGERVS*	hallmark_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0068	cloud	direct	high	368	0.997	GCA_002999595.1_01318
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	79739	80104	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	51413	51778	GCA_002999595_1_9_100	GCA_002999595_1_9_100	+	185932	.	PFAM:PF04883.11	type-I-neck-protein	MTKGLDEILGNLTRLQVRVPTVAKAAVTEAAEEFRKQLSTNTPEDSGVLEGDTAVSGFKGASHGIISKDIGYGRQAGWRAHFPDAGTIYQAPQDFKEKTINQMTPVAKEIYAKKIREGLNL*	hallmark_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0069	cloud	direct	high	365	0.997	GCA_002999595.1_01319
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	80101	80538	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	51775	52212	GCA_002999595_1_9_101	GCA_002999595_1_9_101	+	185932	.	PFAM:PF05657.10	tail-component	MTIEATVYKLLSGDKEFNKLLDTIRGGEFGNGYKQGIFTYAIPENPVDIIKPSLAPFVRINPNYEVPVIYADDDNCATEYRVTINFWCRTGAQSEEVAHKMDEILERNGFERYTANEKPRYKDNDIDLLTNIRKYRFFDWKKESE*	hallmark_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0070	cloud	direct	high	437	0.998	GCA_002999595.1_01320
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	80547	81098	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	52221	52772	GCA_002999595_1_9_102	GCA_002999595_1_9_102	+	185932	.	PFAM:PF06488.10	tail-tube-protein	MSKVKFGLSAFEYGIVNNEDKVPATKKLPGMKSAKLEITNELQTIMADDGPYAVLSGGITETTLEIEVLDLNSAARKDFYGIETVKGVEKYNKNLTPNDIACMFRTRTEDGKSIWVGLLKGKFTVPGMDMKTKEGAPDPTPDTTKGNFVARGDDETGDILYIGREDNTEFDFAEFKKMVFPTA*	common_virus_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0071	cloud	direct	high	551	0.998	GCA_002999595.1_01321
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	81153	81494	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	52827	53168	GCA_002999595_1_9_103	GCA_002999595_1_9_103	+	185932	.	.	hypothetical protein	MFEIKLKKGGVEKEFKKDFISVEDNLLAIEHQVRQQALYSGEKDIFNPAKHRKVNEAYLQMFVDMYQKQFTVEDLKQADMSILDELNELYLEALGGKKEESDEETEGEEKKEQ*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0072	cloud	direct	high	341	0.997	GCA_002999595.1_01322
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	81524	81694	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	53198	53368	GCA_002999595_1_9_104	GCA_002999595_1_9_104	+	185932	.	.	hypothetical protein	MWIQSLLNSGYTILDIKKMQLSDFELMVEALEKQKPERKEEVVETTLDKAFPFLFG*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0073	cloud	direct	high	170	0.994	GCA_002999595.1_01323
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	81707	85996	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	53381	57670	GCA_002999595_1_9_105	GCA_002999595_1_9_105	+	185932	.	PFAM:PF10145.8	minor-tail-protein	MASNIGDLVATATLDIAPFMTNTKNLKTYLKGLDNSLRSVENSFKTKGDKLNKMRLLYDQTGQSLTNYQKLLARQSDKYNQLKAEIGDVNNATEAQKGALLGARSEMTATAARVVELQGKYNALGRELSVFNRFGNAAIDFGNKMQSVSRSLGGVGSALTRGVTVPIAAGAGAVIKAAISWESAFAGVKKTNEEVVDSNGRVIYSYQDLENGLRGLATKLPASHQQIAAVAEAAGQLGIKTENVVSFTKTMIDMGESTNMSAEQAATSLARLANITKLPQNQFSNLGSAIVDLGNNFATTESEITEMALRLAGAGTQIGLTHGDILGLATALSSVGVEAEMGGSAVSKIMVKMQVAAKTGLAQMEQLSAKTGMTRRELELMSSNNSKGFKNLADSIGMTTNEMNGIIKSSRDLENFGKIAGMSAQEFKQAFEKDAIGAIQKFLQGLGDAEKHGSSAIEMLNEMGIKEVRLRDSLLRAANAQDLFKNAVARGNKAFNENTALTNEANKRYETTASKLKILKNELTETAIKFGGPLLDAIRNGVKAGEPYLQMLSKMAESFNSLDKEQQQNIIKWGLIVTAAGPAISILGKGANVLGSLSKGAGLASKGLGWVVRELRNLLVAKTSITELGSATTSVTAGTKTLSGALGGLSAIASPLGLALGTAGLVGGLVLLANAQDSARTKAEKFGTKLSGDVTSQLEAFNTKMYEAKNSMTNFETGATKSTENVKKAVTSMLDEIKQGAESYNKELEKVAQKYGISPDKIEKAKKNNEQIVKNAETMTQQISEIYSRHNGNVKQLTDTEKQIVESNVRQLAEARVRVLGLGKEKEKAILRTFNGDVANMTKGQLEDRFANLKQAMTEEQTLYKKQKADLKKLLDGGVIDREEYNTKMATLEAQHKATMSKFGEALAKVAQMHQVKSGGLVKYTEEAKKILSEYGLSFEDLANKATASAGKQSTAAAMIGNYTAKMSQDAKNATDQWNALVLDPKTGEVKTNASEEIAKALTAKDGWKNMEFVLKNANIKSNARAQVADALIAQGKWDSTTPKEKELLFQNAKGLKAIYDSKEQLEIWNSIPDKVKKLLADDTDFSTKATVAKDTLEKWNSLTPEQKKLVATNNTTEAVNLALSTLGIIPEHKLTSLDAKNNTQVATSAAQALIDGVKQLAPAQVHASDQTIGPTSSAQSKINSVKQLAPALVNAEDLTRGPTGSAKSNINSVHGKTVHINAVDNASGVIGSIRGMLSTLADKTINVFTRHINHAKGTNFHPGGLAMVNDQKGPLYRELVTLPSGEAFIPEGRDVLLPLPRGSKVLPANKTKRLFPRYAKGIGFEDTNIAQLTSRMSRLSSEQRIEISSSNNSELKNMILELIQYFKDRESDDLLGHALDTIKEMAKRPTLVAVQADRQEVARLYAQPLAEEQAKREAILRAVDGKGW*	hallmark_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0074	cloud	direct	high	4289	1.0	GCA_002999595.1_01324
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	86000	87514	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	57674	59188	GCA_002999595_1_9_106	GCA_002999595_1_9_106	+	185932	.	PDB:5LY8_A	Distal-Tail-protein	MEKVFYGGIELTKYITIAKGFTLFDGADFDPQFGDYSTSDGSGFLFTRKGVKKISLPFYNKTGTFEEYDELQKALNTEEPKELKFSRAPEKVFYAIPTGTMSFEALVRNNGKGAITFIISDGLAHAKNPKHFEFKKNAQGVLEAEIINNGSAEIPVNYRIKLKHESGYIGIVSQYGAMQFGKIEEADLVEEKKNVLLSGNGKGDFKNWIDGTVFYENQNKKVVTKMAADSNLGGRLGVLPANFTNTANGAYFGAVKELQLSQQAKDWYIWARAWFETGYVSQTGAWCLSVVDSDNHFIAGMAIEKSERARNKALVVFLMGDGAGGSRVVKSIEFTPSLWVKDNPYSLEGKDQNRNMFDLRKEGDKITYFWYGGYHSFFESRIKDKQATKVQFFAGQYKGGNSTINQLVTHHYLNDFSFYKLNVPFWRDVPNRYPTGAELFIDSTGEVNPEEKGRLYVNNLLAPDDEILGTDYFKVPPGKTKVQLLVSSFAEVESARAEIEEAWI*	hallmark_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0075	cloud	direct	high	1514	0.999	GCA_002999595.1_01325
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	87511	91584	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	59185	63258	GCA_002999595_1_9_107	GCA_002999595_1_9_107	+	185932	.	PDB:3GUD_A	Neck-appendage-protein	MSKRNVRIAIRDTTDTHVVGFFDNKSGIKYNSANLTQFLKGACSVLVLTYHSKKMVAQSGQKLAFRFKDKDFWLNINSVKKTGYKIELTAYSLSLEANKEKRGPHKPANAMSIKQYIDYYDPEHSFEIGINEVADKSIKLEWSGTDTILARLYSVANSFGAELEFVTELNDDYSLKRHVVNIYREGNLGKDKTGMPVRVGEKLKVINYSDNMDDFYTAIRRTGKDGLTMAGLDKKIYDDKGNLLFYNNSNTIYAPQARDKYPSIARKTNNGYIINEDSETEHTSKEALFGYMLSELKKHCELKVDYEVEGAVDGNIGDRKTLIDGRHFDPPLYVQARISEQTEALLETSDVKTSLSNYVRKSSQIANELLQRVEQLTLEATPYTIKLATNNGIVFNNNQGQSTIYPSLKRGQKPVECTWKWLVDNQVFGTSPTFEVKAAGMSSKLVLTAIALIDGKEVAREQVTFSNVNDGAKGDPGKSITITKTERQSDGVKVTFSDNKSIVVPKGDKGDPADSKELSQLKQEMNQARQGLDDVKADLLREKSESSAKIDQVKQDVGAIRTQQTTYEQSNEQNLARITGQLGDKASKTEVKQTAEGIREELASLSAGGRNLALGTSKEWSAPFTNFSGNPNIWSPLYKVLTDGLRVGDTLRSKIILKYTDVRPAAGKTATVWLQGNGNVTGWTTGAYNGSPAKTLNGSGEITFEHSFKITENHLKNAYWNWMFRTDFIASGSLQWRLAKVESGSVFTSWSPAPEDTEGQITEAKATFERTAQGLRTDLTAVQTYVSADGARTEALRTYSREETARQLTAERKVIEAGYVAKAQHTEDVRGLTRRFEELNSGGPNLVSNGATELGLKDWLANGKLTADRKHPYFKNGTAAMFVLDTTEATVAHMQQNQYNVLKRNTDYTLSFTAFASNNVSGFRALVGLLSNTDHTWKKTLYTYTKTLSPTQAERITVQFNSSDFDGFALRFDNMGSSNGRSATVWISEIDVYEGTIKRPYQPSPANGQSYADTKLAEYKQTVDGQLAAVKQEVDSKVSQTTFDQRANQITQSVQELSNNTVKKNQLKIDENGLVSSSEKVVNGQTLASMISQNPEWVEIIAKLLRVKADMIVNGAITADKLNVKELSALASDLGKITAGEIEFTTRFRNSPSHDTWGTVPGEYNYDATVLINSSGIYSNGKIGRENKEDKTPTITPVSYFKNGELFFANLEAGHSLKYMQMNGIHPFVRGGSSLMYFGKKEDGKDALYITCHNAELYLKSDNYTDWKQSEVNNKVRWKVQGSLVLVDFNLQFDRDGTYHLVDIPKEYVPSNKMFPVQAWSLDRNKDRTAQLNVGGDLHIIGAERGIPYFGQIIWTY*	hallmark_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0076	cloud	direct	high	4073	1.0	GCA_002999595.1_01326
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	91606	91932	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	63280	63606	GCA_002999595_1_9_108	GCA_002999595_1_9_108	+	185932	.	.	hypothetical protein	MAELLDVETVTEPFDLQTALRYMDENGEFIRFKNDTDDYYIYKETQKRPAIVGGKRKLVEVPLVWAFDRYNNSITTFKFTNMFDKNFYIMKFDEAGEPIWDDPTKKKE*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0077	cloud	direct	high	326	0.997	GCA_002999595.1_01327
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	91936	92166	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	63610	63840	GCA_002999595_1_9_109	GCA_002999595_1_9_109	+	185932	.	PFAM:PF04531.12	holin	MAPDVINAVVTISASLIGTFGGIITSAKITTFRIQELEKKVEKHNSVVERTYRLEERTNYLDEQIDKLENKIEKEK*	phrogs_hmm	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0078	cloud	direct	high	230	0.996	GCA_002999595.1_01328
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	92168	92536	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	63842	64210	GCA_002999595_1_9_110	GCA_002999595_1_9_110	+	185932	.	.	hypothetical protein	MTKLTEVAEGNFNFGFGTKLYLARDEEGEVRAHISKSATQRWDDGQFTLSERIPEGFKPAHAVTFTAKVIHQNKIHPQATVDLVFMPDGRVFTSGKNIHQIPTPVQLVGEVTYIIGASQFDK*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0079	cloud	direct	high	368	0.997	GCA_002999595.1_01329
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	92551	92883	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	64225	64557	GCA_002999595_1_9_111	GCA_002999595_1_9_111	+	185932	.	PFAM:PF04531.12	Phage_holin_1	MNKINWKIRFTKKNKAFVTRVFVAVFIPILTYYGLKVNDITSWNVLFDLMAKAFSNPFILVMSIFNFINIIPDPTTSGFGDSEQALGYDTVKDDKDKENTEKQTETEKGE*	common_virus_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0080	cloud	direct	high	332	0.997	GCA_002999595.1_01330
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	92886	93695	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	64560	65369	GCA_002999595_1_9_112	GCA_002999595_1_9_112	+	185932	.	PDB:5T1Q_D	Adenosylhomocysteinase	MSRIESSIAEMRRLQATPVYYDMGDRYGNDADRDGRVEYDCSSAVSKAVGLSLNNNTETLKSNLPTIGYNCVYDGVDGSIDFERGDVVIWGPRDISSSLGAFGHVMIMTSPTTMIHCNYGYDGVTENDYNQIWEINGRPRETVYRLNAQAQATPTQSQASSKLKVYQVNDLQFVNGIWQVRCDDLCPVDFDWTDNGIDVADIDITDASGNVISDQETKVGSYFVINPNKVVSDGEGAYGSGSYYWRHITLAASGQIWLSVWDTNHLLHG*	common_virus_hmm	common_virus	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0081	cloud	direct	high	809	0.999	GCA_002999595.1_01331
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	93751	94062	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	65425	65736	GCA_002999595_1_9_113	GCA_002999595_1_9_113	-	185932	.	.	hypothetical protein	MQIEKYEKGEMSYTAATIRKYKKRVAELEAAAAQIENTEISQKAQALIESGKVTQWKKHPTIYFVKGYRKIAVILDTDGHFKLSARYYPHDDKIKQEILELIN*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0082	cloud	direct	high	311	0.997	GCA_002999595.1_01332
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	94052	94234	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	65726	65908	GCA_002999595_1_9_114	GCA_002999595_1_9_114	-	185932	.	.	hypothetical protein	MRIIQEINEIYGTNYKNAEQYLDKVMSALFEFEEFDDYYNALEASGDQPMLQTFLAYYAN*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0083	cloud	direct	high	182	0.995	GCA_002999595.1_01333
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	94258	94599	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	65932	66273	GCA_002999595_1_9_115	GCA_002999595_1_9_115	-	185932	.	.	hypothetical protein	MIKVTKYNKVYAVSEQEIEKQIYIFLNELKMNEMGEYTGLVAGEAVTQEDIDKEISKLKDRIEKLKAHDNDLIASLFVWTKEDAERVRKEQERLGIADLFEDDEEEIFSVPVE*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0084	cloud	direct	high	341	0.997	GCA_002999595.1_01334
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	94667	94873	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	66341	66547	GCA_002999595_1_9_116	GCA_002999595_1_9_116	-	185932	.	.	hypothetical protein	MALCGLTRQQVNIMKKSIIIITTIIITLTIAFGFYQLEKKNQELQQQINQLYEYNEKLDYHVSGLLEK*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0085	cloud	direct	high	206	0.995	GCA_002999595.1_01335
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	94851	95048	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	66525	66722	GCA_002999595_1_9_117	GCA_002999595_1_9_117	-	185932	.	.	hypothetical protein	MIKQHTEQEILEILKEIEIEPDMVDIWEDRDGDISIEARGMAPAGEREFKMKQIGHVDNGIVWLD*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0086	cloud	direct	high	197	0.995	GCA_002999595.1_01336
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	95256	95531	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	66930	67205	GCA_002999595_1_9_118	GCA_002999595_1_9_118	-	185932	.	.	hypothetical protein	MTAQKTGNKIFVKRDYDFDLNGFTLTYTIKVYDVYEVEYKDDRGSYYKIEHITVDEFTMTDKNIEQDYNGILSDMWKELEETYNITNRKYA*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0087	cloud	direct	high	275	0.996	GCA_002999595.1_01337
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	95754	95960	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	67428	67634	GCA_002999595_1_9_119	GCA_002999595_1_9_119	-	185932	.	.	hypothetical protein	MIEEKEKRKGYATKEQQAAANRRWAEKNKEHKNYLSRRSNARGFIRNLATKEDLTELSKLIEKNLKKF*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0088	cloud	direct	high	206	0.995	GCA_002999595.1_01338
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	CDS	96116	96247	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	67790	67921	GCA_002999595_1_9_120	GCA_002999595_1_9_120	-	185932	.	.	hypothetical protein	MKRLEKRKQKESKRQEHITIKLLLILAILEVIDKLLDLLLKLK*	.	hypothetical_protein	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_CDS_0089	cloud	direct	high	131	0.992	GCA_002999595.1_01339
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	tRNA	48925	49005	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	20599	20679	tRNA-Tyr	tRNA-Tyr	+	185932	.	tRNAscan-SE score: 68.4	Tyr	NA	tRNAscan-SE	.	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	tRNA	49047	49118	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	20721	20792	tRNA-Gln	tRNA-Gln	+	185932	.	tRNAscan-SE score: 60.1	Gln	NA	tRNAscan-SE	.	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	tRNA	50562	50633	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	22236	22307	tRNA-Arg	tRNA-Arg	+	185932	.	tRNAscan-SE score: 57.8	Arg	NA	tRNAscan-SE	.	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_tRNA_0003	.	.	.	.	.	.
GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote	cenote	tRNA	72729	72799	GCA_002999595.1	PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595.1_PVTC01000006.1	GCA_002999595.1|PVTC01000006.1	GCA_002999595_1_9	GCA_002999595_1_9@C1	44403	44473	tRNA-Glu	tRNA-Glu	+	185932	.	tRNAscan-SE score: 57.5	Glu	NA	tRNAscan-SE	.	C1	67921	28327	96248	GCA_002999595.1|PVTC01000006.1@region_28328_96248@tool_cenote_tRNA_0004	.	.	.	.	.	.