core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote	cenote	CDS	1	287	GCA_003040695.1	PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695.1_PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695_1_35	GCA_003040695_1_35@C0	1	288	GCA_003040695_1_35_1	GCA_003040695_1_35_1	+	16313	.	.	hypothetical protein	ELRTEDGKKKRYNAPTFIKGSVAREGLALGKKLEKQEEDFDPDIMLELYQFIADKLYEGKFSAEEFEDGIDAREILGVAMEQLTQSLGDPQENLK*	.	hypothetical_protein	C0	16314.0	0	16314	GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote	cenote	CDS	371	526	GCA_003040695.1	PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695.1_PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695_1_35	GCA_003040695_1_35@C0	372	527	GCA_003040695_1_35_2	GCA_003040695_1_35_2	+	16313	.	.	hypothetical protein	MGYKDHEIQQADFYEMIRIIMQTSDKQSKTTRVKKNESLIGAITGKDPRKK*	.	hypothetical_protein	C0	16314.0	0	16314	GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote_CDS_0002	.	unmatched_CDS	none	0	0	.
GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote	cenote	CDS	544	6468	GCA_003040695.1	PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695.1_PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695_1_35	GCA_003040695_1_35@C0	545	6469	GCA_003040695_1_35_3	GCA_003040695_1_35_3	+	16313	.	PFAM:PF10145.8	minor-tail-protein	MAEQYEGVTIKLGLNTANIDRGMQALSRKMKTLNSEMKSHLSAFDMAEKSSDKYSGKIKILNKQLETQGQKVASAENKLKSLKNEQTKANEKIAESSQKLKAEKATLDTLNQTLSRHNSKLNQTKAAYDKADADLKRYKSDLDLLKAKHQEAGASVKTLKNKLTELTNSNKQNTAEFKRTQAQLNVVESEYKQLGAEVDKANLKYRSQRKTVEETKQAHQKMSQTVDKETQQLKVDIKEQEKVVNGAEQAHQKLQKRINGLPASIDKAEKAVHQEKATFNSLQRQLKNTEAEYERYKQENSRTAQVTNRAKEAISALTTQLKRSLNQFKATGSSVSSYQTRINDLKNAHTQLKNNIAMLNHEHRRLSGEQGRNSEAARQLADKINVEKIKMNELSGEIKRTEGSLKQFEREQKIAASLSATPAGRAVQSINKYQNKLRDASNTMKAAGRISMIYMTAPIVAGIGGAVKASIDWEDALTGVAKTTDMTGKELSNMGDKITDMSSKMPFAATEIAGVAEAAGQLGVKKSSILDFTKTMMDLSVATNMTADEAATEFAKFANAAGMPIDNVDRLGSTVVNLGNNTATTEKDIVNMGQRLAGAGAQAGLSADEIMSIAAAMSSVGIEAEAGGTAMTQIFNKMTKAAASGGDELKGFAETSGMSAEQFAQTWKNNPTKALSAFVKGLGNTKGGAKGVQKALEQVGISGIREADTVRRMANNHKVLDDALKVGSEGWKENNALTNEAQQRYDTLKSKLIVLKNNFVNFGREIGDAVSPAVGWLADKLSAAFKGLQNSSNGTKIFVAALGGILATLPPVLLLAGGFAGALVNIAKLLSGIPELAGVFSVLTGPIGITVAAVAALGTAFVIAYKKSETFRNIVHTVIDPVIEGVKRLWGNIKLLFQGIKNLFQGNDDLGGKLLNKLFPPGVVEAISNTIDFIKEKFTVVFGAVSDFAHKIGETLSTFWEENGTQIIEALTNIKNFIQPIIEAIKNIIVGAMMIIWNIMKFIWPAIEWLIKSVWENVKGIISGALDVILGIVKIFSTLFTGDWKGLWDSIVQVLKGIVQVIWNLVQLWFVGKILKLFKVFGRFAVGIFRGLWKKVVSIFIKMKDGVVRIATVIKNGVSRVFTALKNTTVKIFTIVKNFLIKVWTTIKNKVVSLAQRLWLGIKNIWNKIKTFTVKLFTTIKNFLIKVWTTIKNKVVNLVRRLWNGIKNVWNKLKTVTIKLFTTIKNFLIKVWTTIKNRVVNLVRRLWNGIKKVWHTLKTVTIKLFTSVKNFLVKVWTTIKNRVVLVVKKLWNGIRRVWLNLTKGSRKIFNKFKAYFINLWEKIKSTVINIVSKLWNRVKRTFNNMKDGLKGIIDKIKDHIGGMVKAIKKGLNGLIKGLNWVGDKLNLPKIPKLSKGTQKINRKIRTTHDGKLKSGTMATVGDKGRGNGKGRDGRRELIQYPNGRTVITPAKDTHTYLPKGSRVVNGKQRQSVEGPPFSTGTLPRFSKGSWFGKTKDWVGDKVSNIGSAIGNGAKMLADKVGDVMDYVEHPGKLLDKVLSTLGVDFKSITKGMGMVGEITRAAWKRIKKAAIQWIKDGFDSMAGDGSVFDGYDILQKYSAPPKPPNPNYPFNGGVHHGVDYDMPVGTDVRTPMAGKVRNWYDSYGGGNTVTVAKGKTYLWFMHLSKQLKKTGEQVKAGQLIGKSGNTGSLTNYRHLHFQVNQGGEANKYSTDPIPWLKKHDKTGGGKRKPSEWRSTIEKAAKRMKVSPSEAQINGIIAQIQRESGGDPGITQGNIGDINNRNGTPAQGLLQFVPSTFKSFAVKGHTNINSGYDQLLAFFNNSNWANDIQYGKSGWGPRGHRRFATGGLIRQPGFYQLAEQKWPEWVIPTDPKRRTDAQKLLALAGKDIMSGKRNRRPSHFNSSSVKYNETDRKDNKMIEIMAQQLRETQKQVELLTRLVASNQRLENKPSGFNERDISRAQGDRYRLDAYSLGGV*	hallmark_hmm	common_virus	C0	16314.0	0	16314	GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote_CDS_0003	shell	direct	high	5924	1.0	GCA_003040695.1_01973
GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote	cenote	CDS	6470	7303	GCA_003040695.1	PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695.1_PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695_1_35	GCA_003040695_1_35@C0	6471	7304	GCA_003040695_1_35_4	GCA_003040695_1_35_4	+	16313	.	PDB:2X8K_A	Distal-Tail-Protein	MKEKQVELFNDDFNYTLTDIPRLKFLEFEEGEVQRKNNEIEMEGSDGTLVGASNFAPFELKLMFSYLGDNMNEYKLAKEKVRQIINQRDPYYVWHSEMPGKKYAVVPSGQSIEDLTATFGTFEITFSVYKGYSESYKDTSDFDFSDESFQFQQGIIGDEAIQYNHNTRYFKIYNGSSDTINPLLRHKLNIKINVVAPNGFELCNLTTGDIFEYKKALKKRTEISILGVHPYIDNKRVGKDTNYDFITLAPGWNEILIRGESLTDNPEIEFVFNYIYR*	hallmark_hmm	common_virus	C0	16314.0	0	16314	GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote_CDS_0004	shell	direct	high	833	0.999	GCA_003040695.1_01974
GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote	cenote	CDS	7316	8890	GCA_003040695.1	PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695.1_PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695_1_35	GCA_003040695_1_35@C0	7317	8891	GCA_003040695_1_35_5	GCA_003040695_1_35_5	+	16313	.	PDB:3GS9_A	tail-protein-	MENLVLVERNNDFAEIINDFDFGSFKYEYEINGDRSISFVAYKTSNNADIFNNLINENYILWKGQKYVIKSTELKYENAVITNEVIAKHISMEFQNHFVEKDLSDEAMNDESSESENDEAVTMKLNTFLKDVFKNNKLGFSYEIHGKFKDAVQVEKIGDKNGIESLQDGAEAFGYIYFGDNKTIHIYKPDAFYEPSDEILVYKYNTSTVSAKTTTTELRTFIKGYGKKKKKSETKNYSPIKPQSLSYSGKFTKEGTWRTEQVGASYSKTLNCKWGNESLTWSLKKMSKGGIVEIYLDGNSKGKYSCYSKSATTEKIVVATGLKKGKHTFKAIFRGAKDGVDYKNSKPNMYVGTKKSNVLNLTAVLKGKDIYHTYAEYKSDNYDTFGHAEAPTIYDDNIKTKGELIDKLKASLDDEPTLEVSTNYLGLETLHENNTIRFIHKPLGFNADLKVVKLIEKHPLVNQPIEVEFSNAKTDILKIQQQLNKKIKSFNKSIKKSTNNTDQIDIQSSFEKFSEDVGSVIIDE*	hallmark_hmm	common_virus	C0	16314.0	0	16314	GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote_CDS_0005	shell	direct	high	1574	0.999	GCA_003040695.1_01975
GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote	cenote	CDS	8898	9068	GCA_003040695.1	PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695.1_PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695_1_35	GCA_003040695_1_35@C0	8899	9069	GCA_003040695_1_35_6	GCA_003040695_1_35_6	+	16313	.	.	hypothetical protein	MLKYLLDDYREIVFPMTHIEAVYGIENIYNMIDKNKIEIESLKQEIQELKRKEGNQ*	.	hypothetical_protein	C0	16314.0	0	16314	GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote_CDS_0006	shell	direct	high	171	1.0	GCA_003040695.1_01976
GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote	cenote	CDS	9065	10924	GCA_003040695.1	PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695.1_PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695_1_35	GCA_003040695_1_35@C0	9066	10925	GCA_003040695_1_35_7	GCA_003040695_1_35_7	+	16313	.	CDD:cd03872	Peptidase-M14	MILTLDFPIEIGHNFRTKMITNFKIILDYYNELDHQHQRHTTTEPHAHQAIQVDYRHTNVSAFLDYLNSAINNLVLGNNGDGIAETKQARVSIDGTVHPLLQERLVYDFLGVHSRLEKQENVLGDASYIWYPPYIGSNKLGEDGTPNHWDPEAHLNAFVNPLVDNDYVTKKTIGKDQSGKYNVYRYTFEPQHYSKTLLVTSCIHGNETSGFFSMCHITNMLVNEWEKHPQLAYMRKNVRLIWVPMVNPWGFANQERENVNNCDLNRNFDYNWDKSGGTDPAEKNFRGKAPFSEAESQNMRQLIQSISGLTAHIDLHDIISVKADYCLFYPRWAKQSTNRMAQLINKLKNEGDLVVWGSSTLGSLSNWVGVKNNVTSYLSELNEGRVGDKKSPAEMRRSVRWIGNLVFELCQLESEQNGQTSNDPFIKAMIYDDKFNDKTSEVITLREDRNEWQRIMMSQQRFRVTANGFVELYGYITINVDRDVTVGINPNIIQNYHPFFSKTKTKERNLYSIEHVMNKGNTTVPIYAIAGVQMSSITEEGSNRVDEVMPMLDLLKKGEGVVKLKQVKLFVKFTPSNNAGAVQILKSGEHGNLKEDTFTQIYPNDLNYSDIRNTINPNQ*	common_virus_hmm	common_virus	C0	16314.0	0	16314	GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote_CDS_0007	cloud	direct	high	1859	0.999	GCA_003040695.1_01977
GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote	cenote	CDS	10936	12144	GCA_003040695.1	PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695.1_PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695_1_35	GCA_003040695_1_35@C0	10937	12145	GCA_003040695_1_35_8	GCA_003040695_1_35_8	+	16313	.	PDB:4DIV_C	Distal-Tail-protein	MELKKIGKIDIKDEPYLKPISDLDIGFYNLDNHTAVLRFYITKDNHPLLISDKNANTYVYLESANGSNQIVEDIAYINPMKGLVEITIPIEFLQASTGTSVTGQIYISVNNVDNPSDADTVVLNEFTFDVADSKINKINGATKISYIRMFDELRKRIGEREKDIQEKLDNMEDYITKVEVKTAEGVKEIDTKYKNAYASLSKLGQTNENEINEALNAALSSLNNTTNDNYRKVRDIGAKHLRDIRAEKTNIENLLNSKGFVRHETLVALSTDLKQSVNELIPEVSDWITYDLNDDARKDKHYKAKGQNGFNCAYKTIKSRDYKMVSVRVNADTFESGDAIAKLPENIVTHTHTAFIRAVPQKAYGAQVVLEPTGELKVWISNPGEWEVDASHYIYGETCFIE*	hallmark_hmm	common_virus	C0	16314.0	0	16314	GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote_CDS_0008	shell	direct	high	1208	0.999	GCA_003040695.1_01978
GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote	cenote	CDS	12158	12778	GCA_003040695.1	PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695.1_PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695_1_35	GCA_003040695_1_35@C0	12159	12779	GCA_003040695_1_35_9	GCA_003040695_1_35_9	+	16313	.	COG4195	Phage-related replication protein YjqB, UPF0714/DUF867 family [Mobilome: prophages, transposons]. 	MADVYHSMSELIRKEKDYKFEYYDQGSHNLITAIHGGGIESGTSELAQCIAEKSRSNYFSFKGMKKENNYDFHVTSTHYDYPTLIQWSQKMKQVIAIHGVKGNDVITYVGGRDKEMRNAIIELLNGNGFKAEKAPKRLAGTNPNNITNKNALGQGVQLELSTQQRKMLFKNNDFSRSVREKEINWSDDMYLYADSICRAIKRGESS*	mmseqs_cdd	nonviral_gene	C0	16314.0	0	16314	GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote_CDS_0009	shell	direct	high	620	0.998	GCA_003040695.1_01979
GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote	cenote	CDS	12775	13203	GCA_003040695.1	PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695.1_PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695_1_35	GCA_003040695_1_35@C0	12776	13204	GCA_003040695_1_35_10	GCA_003040695_1_35_10	+	16313	.	.	hypothetical protein	MTKHKNILLPQKIATLSLLALGAFITIRGLYFVVNQENIIYESEFYTTLYRVMSMWIWGTLLIVFGFLIILASCFFGKRSTNNISNYCMLIGGAGGAIIYFFIASASIYNTINWISPAQFITITAWLCFISFLGGSDIYARR*	.	hypothetical_protein	C0	16314.0	0	16314	GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote_CDS_0010	shell	direct	high	428	0.998	GCA_003040695.1_01980
GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote	cenote	CDS	13190	13588	GCA_003040695.1	PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695.1_PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695_1_35	GCA_003040695_1_35@C0	13191	13589	GCA_003040695_1_35_11	GCA_003040695_1_35_11	+	16313	.	.	hypothetical protein	MPEDKYVLKHEWQESNGKINEKMNQIDNKHTKNYTDLLNRIDKQTILQEKSFESQSKSEQHLEKISTSLSDMGYRVRDLEHDSDTNKKNIQMIQNKIEDEAKGNRDVIVAWISVVGVVLVPIITLVANVFFE*	.	hypothetical_protein	C0	16314.0	0	16314	GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote_CDS_0011	shell	direct	high	398	0.997	GCA_003040695.1_01981
GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote	cenote	CDS	13637	14125	GCA_003040695.1	PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695.1_PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695_1_35	GCA_003040695_1_35@C0	13638	14126	GCA_003040695_1_35_12	GCA_003040695_1_35_12	+	16313	.	PFAM:PF04531.12	Bacteriophage-holin	MNWKLRFKNKPTLVAIVGACLLLVKQVTELFGLDLSAQLEQIADILGTIILLLVTVGIINDPTTEGVNDTELVKQYNKPRKQGLMPVDFVKPPQKEDENVAPEAKAKEIEDFDTNQPFTDDSDEVDFDVADDEADETLKRGASAYHDDQILKEDDENASETN*	common_virus_hmm	common_virus	C0	16314.0	0	16314	GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote_CDS_0012	shell	direct	high	488	0.998	GCA_003040695.1_01982
GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote	cenote	CDS	14106	15539	GCA_003040695.1	PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695.1_PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695_1_35	GCA_003040695_1_35@C0	14107	15540	GCA_003040695_1_35_13	GCA_003040695_1_35_13	+	16313	.	PDB:4OLS_C	Endolysin	MPAKLTKEEAKEFIKTLNGKMWDYDGAYGAQCFDLANVYWDKLFGHGLKGQGAKDIPNVNNFNGEAHVYNNTASFKAQNGDLVVFNSNYGGGYGHVAIVVNGNHDGDLQQLKSLDQNWYGGGEAMTEPAQYIVHNYDFPMWFIRPIFKKGSETKKSTQSATKTTEKKKEAPKKKPIKLKYIEDEVTGYKLDKRGSNPKGVVLHNDAGSAGATAESYHKGLVNASQERLEKGIAHSYISGNTVWQALPEERIAWHTANSNGNKNYYGIEICQSIGASDKTFLKNEQAAFQEAARLLKKWGLNANRNTVRLHVEFSNTSCPHRSALLHTGHDPEKQGMLSKQQQKKLKDYFIKQIRAFMDGKVPTAKVVKGKSSSNTASTIAGAWKRNNYGTYYMKEKARFTNGNQPIMVRTQGPFRSCPYAYDFKPGDHCDYDEVMLQDSHVWVGYNHNNKRYYLPIRTWNGVAPPNQGVGYLWGQIN*	common_virus_hmm	common_virus	C0	16314.0	0	16314	GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote_CDS_0013	shell	direct	high	1433	0.999	GCA_003040695.1_01983
GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote	cenote	CDS	15753	16079	GCA_003040695.1	PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695.1_PZDH01000035.1	GCA_003040695.1|PZDH01000035.1	GCA_003040695_1_35	GCA_003040695_1_35@C0	15754	16080	GCA_003040695_1_35_14	GCA_003040695_1_35_14	-	16313	.	PF07681.12	DoxX	MVGIIFTAHGIQKVASGFSMPIELVTGLGFPAFIGIILALGELLGGIALIVGFLTNYAALCIAIIMVGALVFVHLSQGFFNSEFPLLLLVASISIMLSYDWKKIFEPY*	hhsuite_tools	hypothetical_protein	C0	16314.0	0	16314	GCA_003040695.1|PZDH01000035.1@region_1_16314@tool_cenote_CDS_0014	cloud	direct	high	326	0.997	GCA_003040695.1_01985
GCA_003040695.1|PZDH01000047.1@region_1_6094@tool_cenote	cenote	CDS	1	432	GCA_003040695.1	PZDH01000047.1	GCA_003040695.1|PZDH01000047.1	GCA_003040695.1_PZDH01000047.1	GCA_003040695.1|PZDH01000047.1	GCA_003040695_1_47	GCA_003040695_1_47	2	433	GCA_003040695_1_47_1	GCA_003040695_1_47_1	-	6094	.	PFAM:PF06673.10	Major-Capsid-protein	MIQFNNNDKFQNSKEIFKEFANMSNRSTDEQIQNKYAEYMNAYTEDLANAIRSDIQKDNSDSSILNSRGQHPLTTEEKQFYNKLVTDDDLNTEVGWKDEILVPETIVDRIFDDLEEGHPLLQHINIQRTGLRTRVIRSNPEGQV	hallmark_hmm	common_virus	NaN	.	0	6094	GCA_003040695.1|PZDH01000047.1@region_1_6094@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_003040695.1|PZDH01000047.1@region_1_6094@tool_cenote	cenote	CDS	445	1221	GCA_003040695.1	PZDH01000047.1	GCA_003040695.1|PZDH01000047.1	GCA_003040695.1_PZDH01000047.1	GCA_003040695.1|PZDH01000047.1	GCA_003040695_1_47	GCA_003040695_1_47	446	1222	GCA_003040695_1_47_2	GCA_003040695_1_47_2	-	6094	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MSDYVIDIYGQIDSTAIDENIVTPQLIRRQLNDMKDAESIVVNINSNGGDVFSGVAIYNMLKRHPAKMIVNIDGIAASIASVIAMAGDVIHMPSNAVIMVHNAWSTMQGDSKQLRKQADALEKINNVIYNSYLSRKLNIKRDELQYLMDNETFLTAEEAKEIGFIDKITASQKSAAAIHNMIFGGEIMRYNNRFRNEDEEQQSQSSQPTAEDVIDLLEEILEVVKDTNAKVKGKDSEGDAKENEEPSNSFARLFNIYK*	common_virus_hmm	common_virus	NaN	.	0	6094	GCA_003040695.1|PZDH01000047.1@region_1_6094@tool_cenote_CDS_0002	shell	direct	high	776	0.999	GCA_003040695.1_02104
GCA_003040695.1|PZDH01000047.1@region_1_6094@tool_cenote	cenote	CDS	1277	2443	GCA_003040695.1	PZDH01000047.1	GCA_003040695.1|PZDH01000047.1	GCA_003040695.1_PZDH01000047.1	GCA_003040695.1|PZDH01000047.1	GCA_003040695_1_47	GCA_003040695_1_47	1278	2444	GCA_003040695_1_47_3	GCA_003040695_1_47_3	-	6094	.	PFAM:PF04860.11	Portal-protein	MSIFDKIAGKNEAIDFSYDLEFIKEASDRAYLKRWSIDTCVNHIARTMSQTKFTVEDEVNQKDYRTVEYKLNVRPNTDESAATFWQKLTRKLILDNEVLVIKTDTDDLVIADDWEREEWSLYDDIFKNIVVGDYKLERNYLMKEVIHLVFSNSTLTSYLNGLFRDYGQIFGRMIKMNLMSNQIRATLSMDSNQANNEANKKAMQNFIHKTYEAFEKNDIAIAPVQKGFEYKEHSSGASGNKGQSLIEDLGKVPEQLLKFVARTLGIPVGLILGETADVEAMTQNYMKFCVNPLIEKVTDELNAKLLSEKESKSGVYIQASSIDEYNPIEKSEAIDKLVASGAFTRNEVRKMTGYEQVDDPEMDEFILTKNYQTQKDVEDEEDYKFKLG*	hallmark_hmm	common_virus	NaN	.	0	6094	GCA_003040695.1|PZDH01000047.1@region_1_6094@tool_cenote_CDS_0003	shell	direct	high	1166	0.999	GCA_003040695.1_02105
GCA_003040695.1|PZDH01000047.1@region_1_6094@tool_cenote	cenote	CDS	2455	4089	GCA_003040695.1	PZDH01000047.1	GCA_003040695.1|PZDH01000047.1	GCA_003040695.1_PZDH01000047.1	GCA_003040695.1|PZDH01000047.1	GCA_003040695_1_47	GCA_003040695_1_47	2456	4090	GCA_003040695_1_47_4	GCA_003040695_1_47_4	-	6094	.	PFAM:PF03354.14	Large-Terminase	MNKLPQVVTDYIDAWHDGKIKLNKERIQLIEHLNRYVFSRDDIYFDEKNIEQLIAFAEKYYFKLESFQKFIIAFIFLKYKEDDALFYEQFFIMMARGSGKNGFLSALAHYFISELHGIKNYNISIVATSEDQAKTSFEEIRQSILDNELQGNFDPAKGQITGYETNSYIKYRTSNANTKDGLRDGCVIYDEVHAYENWDTVNVFSSGLGKTRHPREFFISTDGMVRDGFIDKMKERVKDILSGAELDDPMFPFICRIDDEKEIDQPEMWEKANPMFCQPRSEYARGLFRKVMTQYKQLPNNPSNRPEFMTKRMDYPQVDLSLNVTSWEDILATNRRIPPLEGETCVGGLDYADIRDFASVGLMFKKDGEYIWKTHSFVRQGFLNNVKLKPPIKEWEKKGLLTIVDEPVIDISHIVQWFVEQREKYNLNVICADMYRLDIVKSALEEAGFELVYIRNPKSIHSILAPRVETIFSQNRVIFGDNPLMRWFTNNVQVTIKKDGNKVYEKKDEVRRKTDGFQAFIHALWISDNFLNDEEAMIMDDIDF*	hallmark_hmm	common_virus	NaN	.	0	6094	GCA_003040695.1|PZDH01000047.1@region_1_6094@tool_cenote_CDS_0004	shell	direct	high	1634	0.999	GCA_003040695.1_02106
GCA_003040695.1|PZDH01000047.1@region_1_6094@tool_cenote	cenote	CDS	4082	4387	GCA_003040695.1	PZDH01000047.1	GCA_003040695.1|PZDH01000047.1	GCA_003040695.1_PZDH01000047.1	GCA_003040695.1|PZDH01000047.1	GCA_003040695_1_47	GCA_003040695_1_47	4083	4388	GCA_003040695_1_47_5	GCA_003040695_1_47_5	-	6094	.	PFAM:PF05119.11	Small-Terminase	MNKDDLRAYLESQLDMNNQTNQEKVNRYIKLVDVFENLREAIDDYGYIVETENGSQKFIKPNPALAEMNKVSTSINNLERLMKLDKQEKDDKPKKKALLDE*	hallmark_hmm	common_virus	NaN	.	0	6094	GCA_003040695.1|PZDH01000047.1@region_1_6094@tool_cenote_CDS_0005	shell	direct	high	305	0.997	GCA_003040695.1_02107
GCA_003040695.1|PZDH01000047.1@region_1_6094@tool_cenote	cenote	CDS	4540	5268	GCA_003040695.1	PZDH01000047.1	GCA_003040695.1|PZDH01000047.1	GCA_003040695.1_PZDH01000047.1	GCA_003040695.1|PZDH01000047.1	GCA_003040695_1_47	GCA_003040695_1_47	4541	5269	GCA_003040695_1_47_6	GCA_003040695_1_47_6	-	6094	.	PDB:5H0M_A	HNH-endonuclease	MQLVVVYGAPNSGKTTYVQQHMEEQDIVYDYDILKEAITSKAQGFHTNAHQLLLNIRDAMIDYAKWNNTGTMYVITTFISKVIMRRIKQIDVETRYVRMDTPMRTCMERLHESDVEDKADQEQVIRDWYKRYGNQPASDRIVDKETMRFYKSKKWRDVREQVLKRDNYECQACKRQGKVTTIDRSKHKSLDVDHILELESHPELAYDMDNLETLCVSCHNKKHNRYQSKWKMKNENLKDEKW*	common_virus_hmm	common_virus	NaN	.	0	6094	GCA_003040695.1|PZDH01000047.1@region_1_6094@tool_cenote_CDS_0006	shell	direct	high	728	0.999	GCA_003040695.1_02108
GCA_003040695.1|PZDH01000047.1@region_1_6094@tool_cenote	cenote	CDS	5437	5883	GCA_003040695.1	PZDH01000047.1	GCA_003040695.1|PZDH01000047.1	GCA_003040695.1_PZDH01000047.1	GCA_003040695.1|PZDH01000047.1	GCA_003040695_1_47	GCA_003040695_1_47	5438	5884	GCA_003040695_1_47_7	GCA_003040695_1_47_7	-	6094	.	TIGR01636	phage transcriptional activator, RinA family. This model represents a family of phage proteins, including RinA, a transcriptional activator in staphylococcal phage phi 11. This family shows similarity to ArpU, a phage-related putative autolysin regulator, and to some sporulation-specific sigma factors. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions]	MRLSKNDYSKLEEYFKNYNDLKEQQRFRRYEILYRPSDNNSGGGKTNIPQSPVENEVMTLNKDLKYRNITAAIQAVEDVYRLSTPEQKLLIEYRYWDKDPTVFEWEDIAHEMTKLRDDNKIISRHAALRMRKHILMALAKRIGWVTFG*	mmseqs_cdd	nonviral_gene	NaN	.	0	6094	GCA_003040695.1|PZDH01000047.1@region_1_6094@tool_cenote_CDS_0007	shell	direct	high	446	0.998	GCA_003040695.1_02109
GCA_003040695.1|PZDH01000059.1@region_1_2193@tool_cenote	cenote	CDS	25	420	GCA_003040695.1	PZDH01000059.1	GCA_003040695.1|PZDH01000059.1	GCA_003040695.1_PZDH01000059.1	GCA_003040695.1|PZDH01000059.1	GCA_003040695_1_59	GCA_003040695_1_59	26	421	GCA_003040695_1_59_1	GCA_003040695_1_59_1	-	2193	.	PFAM:PF04883.11	tail-component	MSVEIEGVEVLLGKLNQKYGDSNVNKATDRALNKGAKYYESQIKKNFEVFEDTGATIDEIKRSNPYAVHKNIKEVAIHWQGKMNRYAIIHLNEWGTVKNPNPRGKGQLLKTEREARKPYLNIVREEIKKQL*	hallmark_hmm	common_virus	NaN	.	0	2193	GCA_003040695.1|PZDH01000059.1@region_1_2193@tool_cenote_CDS_0001	shell	direct	high	395	0.997	GCA_003040695.1_02198
GCA_003040695.1|PZDH01000059.1@region_1_2193@tool_cenote	cenote	CDS	417	761	GCA_003040695.1	PZDH01000059.1	GCA_003040695.1|PZDH01000059.1	GCA_003040695.1_PZDH01000059.1	GCA_003040695.1|PZDH01000059.1	GCA_003040695_1_59	GCA_003040695_1_59	418	762	GCA_003040695_1_59_2	GCA_003040695_1_59_2	-	2193	.	PDB:2KZ4_A	head-closure-knob	MNKKEWITGGHMKTPVTFYRAVPNDSPEPGEHISEVYYQCFADAYAPSTKDLEMTNNEAEITLETYYPLGYKITTEMYFEINLPAYNEQYFNIRNIENDLNNKKSIKIIGVLKK*	hallmark_hmm	common_virus	NaN	.	0	2193	GCA_003040695.1|PZDH01000059.1@region_1_2193@tool_cenote_CDS_0002	shell	direct	high	344	0.997	GCA_003040695.1_02199
GCA_003040695.1|PZDH01000059.1@region_1_2193@tool_cenote	cenote	CDS	754	1032	GCA_003040695.1	PZDH01000059.1	GCA_003040695.1|PZDH01000059.1	GCA_003040695.1_PZDH01000059.1	GCA_003040695.1|PZDH01000059.1	GCA_003040695_1_59	GCA_003040695_1_59	755	1033	GCA_003040695_1_59_3	GCA_003040695_1_59_3	-	2193	.	CDD:cd08054	Head-Tail-Connector-Protein	MISDELVQTFKARNRIFYDIEDERIKDDLALSYADIESKCGSFDIEQSPSGKELVLERTRYVFNDKLEAFHDNFLSSIIQFQIENSEVEADE*	hallmark_hmm	common_virus	NaN	.	0	2193	GCA_003040695.1|PZDH01000059.1@region_1_2193@tool_cenote_CDS_0003	shell	direct	high	278	0.996	GCA_003040695.1_02200
GCA_003040695.1|PZDH01000059.1@region_1_2193@tool_cenote	cenote	CDS	1037	1204	GCA_003040695.1	PZDH01000059.1	GCA_003040695.1|PZDH01000059.1	GCA_003040695.1_PZDH01000059.1	GCA_003040695.1|PZDH01000059.1	GCA_003040695_1_59	GCA_003040695_1_59	1038	1205	GCA_003040695_1_59_4	GCA_003040695_1_59_4	-	2193	.	.	hypothetical protein	MMAKFKVLNRFKDLKKDEVHEAGQTVDMTIKRADEIKAKLKDYNRDFLERIDNKK*	.	hypothetical_protein	NaN	.	0	2193	GCA_003040695.1|PZDH01000059.1@region_1_2193@tool_cenote_CDS_0004	shell	direct	high	167	0.994	GCA_003040695.1_02201
GCA_003040695.1|PZDH01000059.1@region_1_2193@tool_cenote	cenote	CDS	1214	1999	GCA_003040695.1	PZDH01000059.1	GCA_003040695.1|PZDH01000059.1	GCA_003040695.1_PZDH01000059.1	GCA_003040695.1|PZDH01000059.1	GCA_003040695_1_59	GCA_003040695_1_59	1215	2000	GCA_003040695_1_59_5	GCA_003040695_1_59_5	-	2193	.	PFAM:PF06673.10	Major-Capsid-protein	MPKDLEDAGVNWVDRYVRTQIKEAFAVAIEKTAIQGRGKAQDEPVGLMKEIDRTTGSVTDKPANNSLTLASPKIAIKELNAIIANLSLKEIYDKDGNVKKTKNVNVLNNVVIALNPADYVWTLGAFMQVNNGQFVSPVPFNVIFETSEFVPQGKAVAFDKQRYMIGVGSETIVRRFDQTLALEDCDVYTAKQFIYGEPEDKYTSFVLNLDFSTHGAPLPTDGEDNSYAPGEGAESTGNSVSAPENTGNSVSTPKNEDTPEA*	hallmark_hmm	common_virus	NaN	.	0	2193	GCA_003040695.1|PZDH01000059.1@region_1_2193@tool_cenote_CDS_0005	shell	direct	high	785	0.999	GCA_003040695.1_02202
GCA_003040695.1|PZDH01000068.1@region_1_1464@tool_cenote	cenote	CDS	86	454	GCA_003040695.1	PZDH01000068.1	GCA_003040695.1|PZDH01000068.1	GCA_003040695.1_PZDH01000068.1	GCA_003040695.1|PZDH01000068.1	GCA_003040695_1_68	GCA_003040695_1_68	87	455	GCA_003040695_1_68_1	GCA_003040695_1_68_1	+	1464	.	PFAM:PF05657.10	tail-component	MISEQCKGRIKFYDYPETGDTSAPYILISPIGAPLPGEFASNKELTTDYVFQIDVRGSDRKQVKTLQEEIKRMMELIDFHVTGGTDQYDSDIKIFLDGRRYQGQPYTDEALKHIDKDIAHTE*	hallmark_hmm	common_virus	NaN	.	0	1464	GCA_003040695.1|PZDH01000068.1@region_1_1464@tool_cenote_CDS_0001	shell	direct	high	368	0.997	GCA_003040695.1_02218
GCA_003040695.1|PZDH01000068.1@region_1_1464@tool_cenote	cenote	CDS	484	1395	GCA_003040695.1	PZDH01000068.1	GCA_003040695.1|PZDH01000068.1	GCA_003040695.1_PZDH01000068.1	GCA_003040695.1|PZDH01000068.1	GCA_003040695_1_68	GCA_003040695_1_68	485	1396	GCA_003040695_1_68_2	GCA_003040695_1_68_2	+	1464	.	PFAM:PF06488.10	tail-tube-protein	MGKYNSSTGLERFYYGVLDSNEKVKNVKVVDYLKEISLEFDEDLEKAYGSNKVAEIAKSNGETSLSATFHRLPIEAQQDLLGLVQHKSSDSVYGFSNATGINYTACVFARTMEDGSKEWFGLGKGVFTRPAKEGQTKEDGVEFGEDEIEGQFMETNLGGFDDQLAVIMAYDEQGQTQGRDTVFQSVFGKSYSEVTEDLTKVEDDSEASQGGNEDSEDKLKDILENMNRDEISDLVFGMPYDEVLKQLSPNSEASAENSEATPGEAVTESPSGEEVTEYPSGEEVTGYPSGEEASETDPNTSEQ*	common_virus_hmm	common_virus	NaN	.	0	1464	GCA_003040695.1|PZDH01000068.1@region_1_1464@tool_cenote_CDS_0002	shell	direct	high	911	0.999	GCA_003040695.1_02219