core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote	cenote	CDS	20941	22011	GCA_003041075.1	PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075.1_PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075_1_3	GCA_003041075_1_3@C3	1	1071	GCA_003041075_1_3_24	GCA_003041075_1_3_24	-	250029	.	COG4585	Signal transduction histidine kinase  [Signal transduction mechanisms]. 	MGEISSLIYLIFPIFGLFYSEHQYNILVYSIILSIFTISYLILVLFHTKINKNYLYIFLLIHYLCIMYFVYAYEPLLSMFFFYSAFALPFIFDVGVKSKEFISFITTMIICAFLTYITHHDYVYTMIIYYIVILMIAFGNFQVRKDRRVRKELEEKNKYINVLIAEQERNRIGQDLHDTLGHVFASLTLKSELATKLLDTDKEAARNEMRAINELSRETLNKVRTIIDDLKVQSFEEEVLSVESILHDANLNFIFKNKSAARSLNPAKQSILSMILREAINNVIKHAHATEVVGKIKEKQHEITLIVSDNGVGIDDDDASSLKSIRERTAYLNGEVKVQSNEGTTIIVRIPRSELM*	mmseqs_cdd	nonviral_gene	C3	12299	20941	33240	GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote_CDS_0001	persistent	direct	high	1070	0.999	GCA_003041075.1_00728
GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote	cenote	CDS	22042	22773	GCA_003041075.1	PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075.1_PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075_1_3	GCA_003041075_1_3@C3	1102	1833	GCA_003041075_1_3_25	GCA_003041075_1_3_25	-	250029	.	COG0842	ABC-type multidrug transport system, permease component [Defense mechanisms]. 	MVATFFKTEFKVMFRKKLYLFMSIFLPLAFYLLFTSLLDLPEEAKKTFYKEYMYSMTVFSLLNFCMLSFPLDMIEERNNGWYKHLMSTPLKPSQYYLVKVLKTMCQFLVAIIVIFTVAHFYKDVSMNLSDWLLSGVTLWVGASLFLTLGLIIAQFSDSQKASSVANLLNMAMAIEGGLWFPINTFPDWLQTISKKMPTYHLKQMSLDLGKDKGINYESLGFLLVYSIIFLSIALLINKKKDVS*	mmseqs_cdd	nonviral_gene	C3	12299	20941	33240	GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote_CDS_0002	persistent	direct	high	731	0.999	GCA_003041075.1_00729
GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote	cenote	CDS	22773	23648	GCA_003041075.1	PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075.1_PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075_1_3	GCA_003041075_1_3@C3	1833	2708	GCA_003041075_1_3_26	GCA_003041075_1_3_26	-	250029	.	COG1131	ABC-type multidrug transport system, ATPase component [Defense mechanisms]. 	MIKINNLSKSFKKTRVLNDINLEIKEHSCTALIGKNGAGKSTLIDILIGNMQGDKGEIIDKSRMINHHKMAILFQKTNFPKFFKVKELFKLHQSFYANSISSSRFLDITQFSETQMNQMASQLSGGQKRILDFALTLVGQPEFLILDEPTTAMDIETREHFWRMIEDLKSKNVTILYTSHYIEEVERMADHVVLLDEGRIQLSDSPEQIKNQQTYSTVVLPPNCKDMVEELNNEFEIAKYKNNYEVRTNHVNTVIQKLIDHHIDLNQIEIHKTSLLDIMFSNNSDQEGVTL*	mmseqs_cdd	nonviral_gene	C3	12299	20941	33240	GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote_CDS_0003	persistent	direct	high	875	0.999	GCA_003041075.1_00730
GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote	cenote	CDS	23828	25300	GCA_003041075.1	PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075.1_PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075_1_3	GCA_003041075_1_3@C3	2888	4360	GCA_003041075_1_3_27	GCA_003041075_1_3_27	-	250029	.	PDB:2ZE9_A	Phospholipase-D	MNLGYFGTILAILLVLGFIINLILAFIIIFLEKDRRSASSTWAWLFVLFLLPIVGFILYLFLGRTVSKKKLEKNNGKELDAFQDLVKAQAESFEKLNFNSPNDQVTKHHDLIRMLLMKQDAFLTENNKIELFTDGHQLFDKVIEDIYNAKDYIHLEYYTFELDGLGNRIIDALETKLKEGLEVKLLYDDVGSKKVNMAKFKKFKSLGGEVEAFFASKLPIINFRMNNRNHRKIIIIDGQVGYVGGFNIGDDYLGLGKLGYWRDTHLRVQGDSIDALQLRFILDWNSQAHRPQFEYDQKYFPKKTGEKGDKALQIASSGPAFDLHQIEYGYTKMIMSARKSIYLQSPYFIPDQSYINALKMAANSGVDVNLMIPCKPDHPFVYWATFSNAADLLDSGVKIYTYQNGFIHSKILMIDDEVSSVGSANMDFRSFELNFEINAFVYDKEIAQQLRHAFEEDVKKSKLLTKEKYEQRPLSIKFKEDLAKLISPIL*	common_virus_hmm	common_virus	C3	12299	20941	33240	GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote_CDS_0004	persistent	direct	high	1472	0.999	GCA_003041075.1_00731
GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote	cenote	CDS	25361	25558	GCA_003041075.1	PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075.1_PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075_1_3	GCA_003041075_1_3@C3	4421	4618	GCA_003041075_1_3_28	GCA_003041075_1_3_28	-	250029	.	PF10957.8	Sporulation protein Cse60	MQQIKFKTFTEDSIERLEKSVNDFLKSDEGSAYSLLNITIKQIEERKFPNIEEDYNAIVTLVTKE*	hhsuite_tools	hypothetical_protein	C3	12299	20941	33240	GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote_CDS_0005	persistent	direct	high	197	0.995	GCA_003041075.1_00732
GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote	cenote	CDS	25877	26902	GCA_003041075.1	PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075.1_PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075_1_3	GCA_003041075_1_3@C3	4937	5962	GCA_003041075_1_3_29	GCA_003041075_1_3_29	+	250029	.	COG2008	Threonine aldolase [Amino acid transport and metabolism]. 	MISFENDYLEGAHEKVLKRLIDTNMVQAAGYGFDDFSSQAADKIRETIKCPEATVRFLVGGTQTNQVVINSMLKSYEGVISADTGHVAVHEGGAIEFSGHKVLAIPSEEGKISAKGVEAYLETFYSDFKKEHMVFPGMVYISHPTEYGTLYTKEELNSLAKVCRQHEIPLFMDGARLGYGLMSENTDVTIEDVAKYCDIFYIGGTKIGALCGEAIVFTKNNEPKNFTTIIKHHGALLAKGRLTGIQFLELFTDDLYFKISKHAIDMAKKVKNGFLEKGYQVYFDSPTNQQFFVLSNDKIKELEKKVKFAVWEKYDDNHRVVRFATSWATTEENVEQLLKLI*	mmseqs_cdd	nonviral_gene	C3	12299	20941	33240	GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote_CDS_0006	persistent	direct	high	1025	0.999	GCA_003041075.1_00733
GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote	cenote	CDS	27424	27618	GCA_003041075.1	PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075.1_PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075_1_3	GCA_003041075_1_3@C3	6484	6678	GCA_003041075_1_3_30	GCA_003041075_1_3_30	-	250029	.	4A54_A	EDC3, MRNA DECAPPING COMPLEX SUBUNIT	MLIKDVYRKNVIVRLYNNEKFKGFVFDYENPLESDTRNYCLDLETDMGFYSFDETEIKEIKIIS*	hhsuite_tools	hypothetical_protein	C3	12299	20941	33240	GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote_CDS_0007	cloud	direct	high	194	0.995	GCA_003041075.1_00734
GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote	cenote	CDS	27620	28438	GCA_003041075.1	PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075.1_PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075_1_3	GCA_003041075_1_3@C3	6680	7498	GCA_003041075_1_3_31	GCA_003041075_1_3_31	-	250029	.	PFAM:PF06152.10	minor-capsid-protein	MAIVQKEVERTASNVLLRGRHPNEYVTVYEKHTVINIYNASRLLVTESARVQAESQKLTYLKELGEDGEYKYVAKIDKKTSKICHSLNDKVFKVKDMIPGVNAPPMHPWCRSTTVPHVGSWRDKFFKERKSKYQVQNNVFEKEKLQEKAKKEMLEMLRSGKIKLDINPEKQNRHSLNHSLYLKNKNFALKNNERLPSYTTLTISELNKLVQQHSTSGEILINKKGFNHKEVINFEKIIGKAFIDGKYIETTFGKVHYSKTGSHIVPFVNKEK*	hallmark_hmm	common_virus	C3	12299	20941	33240	GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote_CDS_0008	cloud	direct	high	818	0.999	GCA_003041075.1_00735
GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote	cenote	CDS	28575	28805	GCA_003041075.1	PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075.1_PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075_1_3	GCA_003041075_1_3@C3	7635	7865	GCA_003041075_1_3_32	GCA_003041075_1_3_32	-	250029	.	PDB:6B0X_d	Major-Capsid-Protein	MENNQSNITEETKHNDNSETIHEQSQQKEKTFSQEEVSQMIKDRLAREKRKSDERIRNAIKEAKKLANLNGNASST*	hallmark_hmm	common_virus	C3	12299	20941	33240	GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote_CDS_0009	shell	direct	high	230	0.996	GCA_003041075.1_00736
GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote	cenote	CDS	28966	29157	GCA_003041075.1	PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075.1_PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075_1_3	GCA_003041075_1_3@C3	8026	8217	GCA_003041075_1_3_33	GCA_003041075_1_3_33	-	250029	.	4A54_A	EDC3, MRNA DECAPPING COMPLEX SUBUNIT	MNLQYYLGKIVKLTLTNNKVLVGKVTDFDDKYDNFDGFNSIEIDTGSILYDITENKIKSIVLN*	hhsuite_tools	hypothetical_protein	C3	12299	20941	33240	GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote_CDS_0010	shell	direct	high	191	0.995	GCA_003041075.1_00737
GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote	cenote	CDS	29350	29997	GCA_003041075.1	PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075.1_PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075_1_3	GCA_003041075_1_3@C3	8410	9057	GCA_003041075_1_3_34	GCA_003041075_1_3_34	-	250029	.	PFAM:PF06152.10	minor-capsid-protein	MKWSRRVWQDSTVIQKVVERTASNVSLRGRHPNEYVTDYEKHTVTNIYNASRLLVTESARVQAESQKLTYLKDLGENGEYKYVAKIDKKTSKICHYLNGKVFKVKDMIPGLNAPPMHPWCRSTTVPHVGNWRDKFFTERKGKYRIQDNVIEKEKLQEKAKKEMLEMLRSGKIKIELNNEKQERHILNTKAYYNKKYNSSILPSYITLDPKEIEKN*	hallmark_hmm	common_virus	C3	12299	20941	33240	GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote_CDS_0011	shell	direct	high	647	0.998	GCA_003041075.1_00739
GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote	cenote	CDS	30104	30334	GCA_003041075.1	PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075.1_PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075_1_3	GCA_003041075_1_3@C3	9164	9394	GCA_003041075_1_3_35	GCA_003041075_1_3_35	-	250029	.	PDB:6B0X_d	Major-Capsid-Protein	MENNQSNITEEAKSNEKLETPNEQAQHNEKTFSQEEVSQMIKDRLARERRKSDERIKDAIQEAEKLANLNGNASST*	hallmark_hmm	common_virus	C3	12299	20941	33240	GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote_CDS_0012	shell	direct	high	230	0.996	GCA_003041075.1_00740
GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote	cenote	CDS	30495	30689	GCA_003041075.1	PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075.1_PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075_1_3	GCA_003041075_1_3@C3	9555	9749	GCA_003041075_1_3_36	GCA_003041075_1_3_36	-	250029	.	4A54_A	EDC3, MRNA DECAPPING COMPLEX SUBUNIT	MRIARSYGHKVNVVLNDDNKLFGDVINFENPYESDSGNFVMDLETELGIYSIDDSEIKEIRIIS*	hhsuite_tools	hypothetical_protein	C3	12299	20941	33240	GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote_CDS_0013	cloud	direct	high	194	0.995	GCA_003041075.1_00741
GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote	cenote	CDS	30686	31561	GCA_003041075.1	PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075.1_PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075_1_3	GCA_003041075_1_3@C3	9746	10621	GCA_003041075_1_3_37	GCA_003041075_1_3_37	-	250029	.	PFAM:PF06152.10	minor-capsid-protein	MNSNFKGVNWSTRLWQDMAIVQKEVEKTTSNVLLRGRHPNEYVTVYEKHTVTNIYNASRLLVTESARVQAESQKLTYLKDLGEDGEYKYVAKIDKKTSKICHTLNGKVFKVKDMVPGINAPPMHPWCRSTTVPHVGNWRDKFFTERKDKYRIQDNVIEKEKLQEKAKKEMLDMIRSGKIKVEINPEKQNRHCKNHRLFEESKSKAIRNNYMLPSYTTIPNRELNKLLMEKSNTGIMLLVNNKFNKKEIIDFGVVIGKAFVNGRYFNTKLGKVHYSKTGTHVVPYIKKEMKK*	hallmark_hmm	common_virus	C3	12299	20941	33240	GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote_CDS_0014	shell	direct	high	875	0.999	GCA_003041075.1_00742
GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote	cenote	CDS	32038	32127	GCA_003041075.1	PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075.1_PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075_1_3	GCA_003041075_1_3@C3	11098	11187	GCA_003041075_1_3_38	GCA_003041075_1_3_38	-	250029	.	.	hypothetical protein	MYTYQLDGQGTVDEIIKDIENDIKLKEKN*	.	hypothetical_protein	C3	12299	20941	33240	GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote_CDS_0015	shell	direct	moderate	89	0.989	GCA_003041075.1_00743
GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote	cenote	CDS	32223	32417	GCA_003041075.1	PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075.1_PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075_1_3	GCA_003041075_1_3@C3	11283	11477	GCA_003041075_1_3_39	GCA_003041075_1_3_39	-	250029	.	4A54_A	EDC3, MRNA DECAPPING COMPLEX SUBUNIT	MHIRDAYGHKVMVVLTNQKNLIGKVTDYENPLETDTGNYNMDLETDLGTYSFDETEIKEIRIIS*	hhsuite_tools	hypothetical_protein	C3	12299	20941	33240	GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote_CDS_0016	shell	direct	high	194	0.995	GCA_003041075.1_00744
GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote	cenote	CDS	32427	33239	GCA_003041075.1	PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075.1_PZDG01000003.1	GCA_003041075.1|PZDG01000003.1	GCA_003041075_1_3	GCA_003041075_1_3@C3	11487	12299	GCA_003041075_1_3_40	GCA_003041075_1_3_40	-	250029	.	PFAM:PF06152.10	minor-capsid-protein	MAIVQKEVERTASNVLLRGRHPNEYVSNFKKQTNSTTYNASRLLVTESARVQAESQKLTYLKDLGEDGEYKYVAKIDKKTSKICHSLNGKVFKVKDMVPGINAPPMHPWCRSTTVPHVGNWRDKFFTERKDKYRIQDNVIEKEKLQEKAKKEMLDMIRSGKIKVEINPEKQNRHNKEHELFKQSVEMAKINGEKLPSYTIISNEELNKLVKLRATTGEFLLLNGKFNRKEIIDFKLPIGKSYIDNKYIETSKGKVHYSKTGTHVIPYIKK*	hallmark_hmm	common_virus	C3	12299	20941	33240	GCA_003041075.1|PZDG01000003.1@region_20942_33240@tool_cenote_CDS_0017	shell	direct	high	812	0.999	GCA_003041075.1_00745