core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	493139	493831	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	1	693	GCA_003048755_1_3_487	GCA_003048755_1_3_487	+	777387	.	COG0692	Uracil DNA glycosylase [Replication, recombination and repair]. 	MQINLDDVKIEPSWKEVLKDEFLSENFARIKENFLKAKSAGIVYPPSGLIFNAFNLTPFHAVKVVILGQDPYHGANQAMGLSFSVPSGVRVPPSLVNIYKEIYADLGIKEPNSGDLTKWAKQGVLLLNSTLSVSAGAANSHASFGWQGFTDAVIKKISQNLQNVVFMLWGNPAKAKAPLIDASKHLILEAAHPSPLARGAFFGCRHFSKANIYLANHGKTPIEWDLNAQI*	mmseqs_cdd	nonviral_gene	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0001	persistent	direct	high	692	0.999	GCA_003048755.1_00510
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	493833	494126	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	695	988	GCA_003048755_1_3_488	GCA_003048755_1_3_488	-	777387	.	.	hypothetical protein	MKKIAIFALLLGVNLFGASEVCKEYVKQSRLYLDELYAKESKKLAGDEKALRLFELKFDEFKQRQIGQEAMIMQNNDEKFCKSELEKVNKLLSELKK*	.	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0002	persistent	direct	high	293	0.997	GCA_003048755.1_00511
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	494206	494733	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	1068	1595	GCA_003048755_1_3_489	GCA_003048755_1_3_489	+	777387	.	1RFE_A	hypothetical protein Rv2991	MRRKDRELSREEALEIIDNCEYSVISCVDDEGEIFSVPISPVRVGESIFVHGATAGSKAKLLQNGRKVEFVCVSFNKVPHLNDSELEMIKDDGKALGGKVFTTEYKSAIAKTRAYEVTDEAKRYEILKILSQKYTAYAMSTFDVAAEYGLKNMKIYELKIESLSAKAKILPKAAK*	hhsuite_tools	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0003	persistent	direct	high	527	0.998	GCA_003048755.1_00512
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	494744	495928	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	1606	2790	GCA_003048755_1_3_490	GCA_003048755_1_3_490	+	777387	.	PDB:1SXJ_D	Activator-Clamp-Loader	MSSLALIFRPKSLDEICGQKAVKAAFLKFIASSKIPHSIFYGPAGCGKTSFARAVASGANYDFYEFDGGNLKIDDFRKILKNYENALNKPLFFIDEIHRLSKTQQEALLIPMENYKALVIGASTENPFFTLSSGIRSRSMLFEFRPLSIGDFEELLDKIREQISFSIDEEAKEYLFKSSGGDARAMLNLLEFAVTLDENVSLENLKTLRQNALKEGAKEDDTHYELASTFIKSLRGSDENAVIYYLARLIDSGESADFIARRMAIFASEDIGNANPNALNLAASTLSAVKEIGFPEARIILAQCAIYLASSPKSNSSYNAINAALRYVQSEEILKIPPYLKNHTKESKDYLYPHDFGGWVEQKYLEKPLVFYKSKGIGFEKTLNEWLEKIKSKG*	common_virus_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0004	persistent	direct	high	1184	0.999	GCA_003048755.1_00513
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	496546	497964	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	3408	4826	GCA_003048755_1_3_491	GCA_003048755_1_3_491	+	777387	.	COG1115	Na+/alanine symporter [Amino acid transport and metabolism]. 	MPTNFAEILNNCVESINSFLWGPYFLITLLCGTGLFFTIRLGFVQIFKFKMGLRELFGNFSLHGEAAGKAGMSQFQAVATAIAAQVGTGNLVGATTALIMGGPGAIFWMWCAAFLGMATNFAEICLAQIYRTKDDSGHTIGGPAFYISRGLKGKWAKILAGFFAIAIIIALGFIGNMVQANSISDGFKGAFGIPQWITGAFLAIVCAVIFIGGVKAIARVAEKIVPLMALLYVGVGLIIIALNFHEIPDAVLLIYKAAFDPSAAWGGATGASIAAAMRYGIARGLFSNEAGMGSTPHAHAAANVKHPVDQAVLGIMSVFVDTFIVLNITVFVVLTANVISFENGKAVFTGITLVQEAFSSHIFGKVGGYSFVAVCLFFFAFTTILGWYYFAEINVRYLLGAKAVRAFQILVVVFVFLGSLQKVDFVWSLADMFNGLMVVPNLIAIIILSPIVAKLLKDHDAGKKYDVKDYLK*	mmseqs_cdd	nonviral_gene	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0005	persistent	direct	high	1418	0.999	GCA_003048755.1_00514
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	498883	499854	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	5745	6716	GCA_003048755_1_3_492	GCA_003048755_1_3_492	-	777387	.	PDB:3D37_A	Tail-protein	MVRKPAFKLEASGKDITNTIRKNLISLSFTDKEGNESDEISFTLFGIYAKPVFGDKLKLWLGYENGLYLCGTFSVQTTSADYKANTTEVRATAVNFASPAKEKRRVSWENTTLFGIAKKIASINALSLKTSGSDQNIASVIQDNVSDIEFLYDLCVKFGFLMAVKNDHIIITAKDAKGDASQTSNTSKNENLPTFTLNLTDLYSLEITEANRNSYTAVIVEWQDIEAGKVKSIKVGSGEQVYKMQIAQPKSDNEAFKQAEAKLNELQRGGINGRCSCVGKNIIASGKLKFGGVPGLEANNFSIKEVSHKLSTSGYEIDIEFEG*	common_virus_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0006	shell	direct	high	971	0.999	GCA_003048755.1_00517
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	499848	500039	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	6710	6901	GCA_003048755_1_3_493	GCA_003048755_1_3_493	-	777387	.	COG5004	P2-like prophage tail protein X  [Mobilome: prophages, transposons]. 	MDKIYIAKDGDRLDTITYNHYGHLRFFEQILTMNPRLNATLHAGDRVFLPDIKEVAKEQAKLW*	mmseqs_cdd	nonviral_gene	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0007	shell	direct	high	191	0.995	GCA_003048755.1_00518
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	500032	500406	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	6894	7268	GCA_003048755_1_3_494	GCA_003048755_1_3_494	-	777387	.	COG3499	Phage protein U  [Mobilome: prophages, transposons]. 	MVLNLGGFKFRWEQTNSIGIETAFGISEQERIQNYPALFSANLGSSTLNIDGQTLPYHGDKQGALKPLYALAALRQSLPLTNGNGKYFGRFVIVKISEKQAIFTPNGAFFTQSFSLELKRDYDG*	mmseqs_cdd	nonviral_gene	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0008	shell	direct	high	374	0.997	GCA_003048755.1_00519
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	500408	502636	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	7270	9498	GCA_003048755_1_3_495	GCA_003048755_1_3_495	-	777387	.	PFAM:PF10145.8	minor-tail-protein	MDNAQVGISIGLAVKGLSKISELKKGFDGLKGKISEAKKAITSLDNTRLSNLSSQIRESQKALLGELTTNFSNLTNSVAIGVPIKLAIDDEAAFANVKKYVDDSDENLAKLKNEMRGLSSQLGESFSNIADIAAGGGKINLAGEELVTYTKMLATGSVAFEMSSEALSKAANNMKVGFKMNDIKELNSFFDSVNLLDNKVTNANASDIFEATSLTAANASLIGLDSKSASAISATMLSTGKASSVVGTSLNALYSTLSMADKKGKNFQEALASIGMDATYLKTALQKDAAGAITTFLEAISRADKNKQAGLLYDLVGGNFNDEIAGLVTNIDALKANIKMAHSDEATGSMQRELQTKLNTTKSGIERVTQAWRNLGSRLGETFLPLTNLLASILSKVAGVLSSLNEKFPRLSAIVVSAAAGFMIFKPVLLLSKIALLSVADGLLGVIRVVKFLNPMLLIAKVRWLAHAVSISSATLAAKAHAFSIWLVGARLRATLAITTAYSAASKAFGVACGVMRSGLMAVTLATKAMKIALISTGIGAIVVALGMAAAYLIENWDEVKAFFLEIWESVKPYWESTTKFFSDLWQGVSDFLSAIFEPVIKIWDELFGGFFDWIAEKFGWINDMVGEAIKGLSSAWNKTKEFFGFGSEEQASSELKPKDDSGGFFNSIFGSDSDTHAKEAPALVAASTGGGAINISFNGDFLLNSDNGKFDLESFKAQIVKGVKDALRRDEFNRKNTDVRG*	hallmark_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0009	cloud	direct	high	2228	1.0	GCA_003048755.1_00520
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	502809	502976	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	9671	9838	GCA_003048755_1_3_496	GCA_003048755_1_3_496	+	777387	.	.	hypothetical protein	MALIIPIFIVLFFFVSPSGFFETFIALVFGLGILGSLIGTAGLALGKTKEVITRS*	.	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0010	cloud	direct	high	167	0.994	GCA_003048755.1_00521
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	503094	503318	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	9956	10180	GCA_003048755_1_3_497	GCA_003048755_1_3_497	-	777387	.	PFAM:PF10109.8	tail-protein	MKEIKIKDEIWQMHAPKVRTIKMADENGGSDMAKTIYMIAALCNKTQDEVENLEFKEFMSLQKALNDFLDVRAE*	phrogs_hmm	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0011	shell	direct	high	224	0.996	GCA_003048755.1_00522
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	503391	503903	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	10253	10765	GCA_003048755_1_3_498	GCA_003048755_1_3_498	-	777387	.	PFAM:PF04985.13	tail-tube-protein	MKRQIPQVIQEGNVYIDGIGYLGVTKKLKLPTIEFEMIESKGALSTNYTTGMLKATEVEFTVSVLDKNMWVNLGLNSFTNRIPWLFKASIFQSGKSKTVPFSAAFTGDIISYEVSEFESGKELEVTIKLSAHFVDINVDGVPMVLKDSENMICVIGGVDYMAGVRSNLGE*	hallmark_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0012	shell	direct	high	512	0.998	GCA_003048755.1_00523
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	503916	505079	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	10778	11941	GCA_003048755_1_3_499	GCA_003048755_1_3_499	-	777387	.	PDB:3J9Q_C	sheath-tube	MAAKFGVNVTVSAEAARPIAVESTTPIGIAGYEEVLENGLHFYMTTAKALEALEAKYKAKKDASQAFKKGSIYRALKGIEDQAVNTQIILSVFTKDDDEDTNDEITECKSAVTAFAKAKSRFGYSPNLIIAPGFSHEDAIKGEIEKMATRLKATGIVDLKADDAAAAIVKMGDFGTNRLVAAYPNVKVWDDETNAYVYEGQSARIAGMIAHTDGASEFGYSDSYSNRVMIGVSGTQIDVDFELGETCTADELRAAKISTIIRESGFRAWGGETSDQDTIWQDLARVRIFDRISQACQKGVLFAIDRKASELYHAKRSVSELLRQLVGAKVLLGYELSWSAKNTDATITAGKFYLDVRMQNNPIVKQLTLDFIYVDKYGSVLMDELNK*	hallmark_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0013	shell	direct	high	1163	0.999	GCA_003048755.1_00524
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	505082	505717	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	11944	12579	GCA_003048755_1_3_500	GCA_003048755_1_3_500	-	777387	.	PDB:5O6V_E	Envelope-protein	MLKSKEILRLIAIILIEFLLEILSFVVVPVALLFCKKDDEHLPKIFRWFEDANDYYDGKCAAINGDSGWREKHYPEPTNRTYKARLLWLLRNKIGRFSSEINGVKVDDVNPYSIETLGDPYITSNGGKKSGFCKVTCTLKDGRERFGFFKTIRYKGFLSGFYCRIYVGWKLMDIAGANALNFKEFTQKDDKKYLKTVWCINPFKKVNQKGE*	hallmark_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0014	shell	direct	high	635	0.998	GCA_003048755.1_00525
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	505704	505871	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	12566	12733	GCA_003048755_1_3_501	GCA_003048755_1_3_501	-	777387	.	.	hypothetical protein	MRVKIKRCEICASKLDKDGACTWSECPKCPEYKQSETKENEKPSKKSKKENDAKE*	.	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0015	shell	direct	high	167	0.994	GCA_003048755.1_00526
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	505868	506185	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	12730	13047	GCA_003048755_1_3_502	GCA_003048755_1_3_502	-	777387	.	.	hypothetical protein	MLRIHNMENELTYIGEKMSYFLICVLSLILGVLLCPIVIFLRARKCEGWDNSNMTNILRVFSHLATHPDDFSRFQYEDGKKPFWYLDKDEFTDVVQTRPTQKDKK*	.	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0016	shell	direct	moderate	300	0.943	GCA_003048755.1_00527
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	506232	506534	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	13094	13396	GCA_003048755_1_3_503	GCA_003048755_1_3_503	-	777387	.	.	hypothetical protein	MKRYKNKNNEIFAYEDDVSEELLNQRIKELGLIPISDDEAKKLLEPKVDEKAKALAQLEADIKECEDDIKHALIIGNTAVLESLRAELKELIVQREELRK*	.	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0017	cloud	direct	high	302	0.997	GCA_003048755.1_00529
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	506544	507929	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	13406	14791	GCA_003048755_1_3_504	GCA_003048755_1_3_504	-	777387	.	PFAM:PF12571.7	tail-collar-fibre-protein	MKQYTLLTANGINKLLKTASNGSKIILKEVVVSDFDGELSESITTIPNEKYRGTINAITINESDSNILDVDAIIPPDVGGFYIKTAGIFCDDGSLFAVARLADTYKPLLSEGSSKDITLSFRLQIANANDSIVLKVDNNVVLATRKWSDATFLKKTDKIDAYTKRESDDKFALKTELTDGLPIGAYLSYPSQKTIPAGFLIADGRSLRKSDYPELFNVLGYVYGGSGENFNLPNFSDGKFMRSIGGNAATLGVVQQDEIKSHSHGVGQQPGVGQSNNGGTGGFAGQNSYIQSGVTGGNETRPYNMAVVIIIKAKNVNTPAAGQIDKTVLATETKAGITKLKNSITAQQEDAAVTEKAVAEAIEANKGLGIGQTYVDVKNIKQINENYENTTGKPIAIFVEVNPQTASYILANVNDVVVAGTGTGTGGQYTNTAMTFIVPPGARYKLTNTYNSKIEKWFELR*	hallmark_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0018	cloud	direct	high	1385	0.999	GCA_003048755.1_00530
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	507950	508570	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	14812	15432	GCA_003048755_1_3_505	GCA_003048755_1_3_505	-	777387	.	PFAM:PF09684.9	Tail-protein	MSLLPNHKSKFDKKFDLLFGVRFEDLDISVINTLASKAPKNLLPVLAASFDVDIDGLNENEARELIKNAYEIHYYSGTFYSLNKALSALYADTKVKEWFDYAGLPYHFKLELDASKNGVSPQTLKRSDEIINTYKNVRSVYDGASIKATASINLKAYSYTFSGENISVDPYVISNISQRASFKVGATTQINEIISIPVNLKAQFFR*	hallmark_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0019	cloud	direct	high	620	0.998	GCA_003048755.1_00531
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	508567	509652	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	15429	16514	GCA_003048755_1_3_506	GCA_003048755_1_3_506	-	777387	.	CDD:COG3948	baseplate-assembly-protein	MSFLKNLPYPGVIEELNYDELLNGIKELFKSYLTDKEISLLESDNYSALLETLAYRELLLRARINSSVKSMLLPFAQGSDLDNIVAIYGIERLKGEKPTAQSEFTLSMPRSSDTYLPKGLILRSENGEIATLKSEVVIRANELKAVGVIILDEFTKTSKAKCEYIQTPLPFVLKAKQLSEFEGGAERESDDRLRERAVLSLERFSTAGSAKAYTYQTLSANAKVLECSVLNGGAGVVQIYLKTTDMSEETRADVESFLNAEKVRPLTDNLSVLNATKIDVKVIATLELTDMLFQDEIAKAISALPTSLSLGEDLNLSYIYKNLHQNGVYRVSLKEPLNDKKISVKEFVNLSYEISYKKAEL*	hallmark_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0020	shell	direct	high	1085	0.999	GCA_003048755.1_00532
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	509649	509936	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	16511	16798	GCA_003048755_1_3_507	GCA_003048755_1_3_507	-	777387	.	PDB:5IW9_B	Baseplate-wedge-protein	MMKYLIDIENSIKDILLTPLGSRVMLPEYGSRIYELIDRKVDDEFRADLACYVIEAVERWEKRVKIDEVKLISLKDHRLNFKIVLISGDEIGIEL*	hallmark_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0021	shell	direct	high	287	0.997	GCA_003048755.1_00533
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	509936	510547	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	16798	17409	GCA_003048755_1_3_508	GCA_003048755_1_3_508	-	777387	.	PDB:3VTO_Q	central-spike-protein	MIEVGIISEVRNDRAKVAIGSMVTDFLPVFQAHANSYAVSFSPIRVGEQVLVLPVHDELNSGVVLRGLYQSSHKTDATDKKIHISFEDGIKMSYDSSSSCLKISSPKLINITCDNANVKAKNVMVEASDTTIKSPNIKLLGNTLIEGAINTAGVGGASGSFEINGDVRITGSITAGGNANFGGSVSDARGNLSDHTNNGLARD*	hallmark_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0022	shell	direct	high	611	0.998	GCA_003048755.1_00534
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	510540	510923	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	17402	17785	GCA_003048755_1_3_509	GCA_003048755_1_3_509	-	777387	.	PFAM:PF10960.7	holin	MENSGLNFSDEIRETAGLIKLAGSWGLNEFIVFMAIFGFIGFVVIFLLLSRYTSKNTDLMIDVVNKNSEAINKQSSATEKLSDILAANFAINKEKLNEIHEDVKEIKHSVKYTRMPRNKKFSEHIND*	phrogs_hmm	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0023	shell	direct	high	383	0.997	GCA_003048755.1_00535
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	510913	511146	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	17775	18008	GCA_003048755_1_3_510	GCA_003048755_1_3_510	-	777387	.	.	hypothetical protein	MKLMQLGLLLLGVLLCGCAFKEPTIIYKEKLTPVRCNAVMPDRPNNDGSFEAHKAKMIYFLKCEDLLKQCIGIADGK*	.	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0024	cloud	direct	high	233	0.996	GCA_003048755.1_00536
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	511143	511487	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	18005	18349	GCA_003048755_1_3_511	GCA_003048755_1_3_511	-	777387	.	.	hypothetical protein	MGYLLNTKICIIFSAVFLLCIGSLALKIHFLNVSIDKKNLEIKSIALDLNTSKQNLKAANSVIESQNEAISKMSVKVEQKPIKEVKRVEKIYLKDESCEAKLKAYQELFFEGER*	.	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0025	cloud	direct	high	344	0.997	GCA_003048755.1_00537
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	511471	511908	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	18333	18770	GCA_003048755_1_3_512	GCA_003048755_1_3_512	-	777387	.	CDD:cd00735	lysozymes	MSLKENIKENEGFKSYVYKDTLGFDTVGYGFKVSSLSKDELFLNGGKAEPMSKAVADQILEMKLIKLASSVCEAFSWLEDKPKNIQDVVIEMCYQMGVPGVKKFVTTLNFIKSGEYEAAYKNGLNSLWAKQTPNRAKKVLSGLLA*	common_virus_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0026	cloud	direct	high	437	0.998	GCA_003048755.1_00538
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	511905	512267	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	18767	19129	GCA_003048755_1_3_513	GCA_003048755_1_3_513	-	777387	.	.	hypothetical protein	MNDLVQIYKSLKQIAPEAICISKASPQGGVYLLFDGIKSVAWKKDRASFRIIFASHSLVDDNFSALSRLDELRQRFIAKSAIFGEDAISEMKFDGFEDSLFKYSFVVEVDIYRDEENEDL*	.	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0027	cloud	direct	high	362	0.997	GCA_003048755.1_00539
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	512264	512572	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	19126	19434	GCA_003048755_1_3_514	GCA_003048755_1_3_514	-	777387	.	.	hypothetical protein	MTIQAEFKEAFSKRAKSVLFNPEEITDEALDVATLETYEECNGRVVKSWAMMDFALIRLKLYLKIALSEEDSLLLSKAISEIKASPLESKPTFNSFIRLECV*	.	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0028	cloud	direct	high	308	0.997	GCA_003048755.1_00540
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	512569	512772	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	19431	19634	GCA_003048755_1_3_515	GCA_003048755_1_3_515	-	777387	.	.	hypothetical protein	MGQHSNSLKGELMEFIVLKDSAIDGSFVRAGEVITLEQEKAEAYEKALMIEPKPEASAKSDKKNKQQ*	.	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0029	cloud	direct	moderate	168	0.824	GCA_003048755.1_00541
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	512748	513647	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	19610	20509	GCA_003048755_1_3_516	GCA_003048755_1_3_516	-	777387	.	PFAM:PF05125.11	Major-Capsid-protein	MLEGLGLKDIAKGSMNATNATLSGSLTPEQANSLINVIKDNSAFLQKIHVEKMSRLTKELDGWDTMRGVLVRVASGEKPSDAQRTQLKKAGVKLEAKSVQLFSRILQDALADNQNNPNFESETFNSFGKIFGNDLALLGFNGTSDTYANSFETLHKGWIQTAKDSSDVTKVTYVANDSVSKRLTALAQSINPDALADSVILISTADMQEYNKELSALNAPSYLINGNADRVLGVKLEVSPLMPKGVYMATPLENLVLGVCLDINRNRWYDPEERALKYIFDASVDYEIIIKKWVSIATL*	hallmark_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0030	cloud	direct	high	899	0.999	GCA_003048755.1_00542
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	513647	514411	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	20509	21273	GCA_003048755_1_3_517	GCA_003048755_1_3_517	-	777387	.	PFAM:PF14550.5	Putative-phage-serine-protease-XkdF	MANKLTNLSITHISLVKAGANKKSIIYKSEASEPSFEKDVSIAKFDEEKGVVYGIVYSPDEVDTQGDFTDAAEIEKAAYAFMKDLKGQNIDKEHDFKPDGKAYVAESWIVRENDALFKSEKVGSWAVGIKIESDELKELIKSGEIAGLSMAGFAKREQVQKNDTSIAAAIANGFNELLKKFEKTKKGEDKVEKETKEISQAEDIKKTLVEGMDELNKKLLGFEKRISELEDVAKDSKQSKNIEKTDDKIVGGIL*	hallmark_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0031	cloud	direct	high	764	0.999	GCA_003048755.1_00543
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	514610	515671	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	21472	22533	GCA_003048755_1_3_518	GCA_003048755_1_3_518	+	777387	.	CDD:TIGR01540	Portal-protein	MENKFIFKSDAPSLQLSSDVQNGDYIEPFISFSDLLELHYANVYHRRAIKIKANMLSQIEIDESDLAKFLPQNVSEKEFLFEFCYNLELFGNAPIEKAGAKTNYKLYNIPAHEWRTNKDKQMFQVDKFGKKIKLDGYYLKFYSPSSRYYGEPDYLAAMCQILTNRQADMYNYSFFQNGARPDLAIIHENSEPSEEQIAAYKKFFSENYKGSANAHKTLLCYTNSIGEKDAKIRFEKLSEVQDLSFKALKEVSRDEIAAAHGIPPRLLGIIQSAQLGGSGELIGQLHQFNELEIKPKIELIEGFFRSIGIKVVLSAVDVTNFKDDGEIVTQLVERGIISISEARSILGWQKNIE*	hallmark_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0032	cloud	direct	high	1061	0.999	GCA_003048755.1_00544
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	515770	517338	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	22632	24200	GCA_003048755_1_3_519	GCA_003048755_1_3_519	+	777387	.	PFAM:PF03354.15	Large-Terminase	MAYNEEFKKECINLLKSGVSSVLVSKQMNVSRPTLQKWLEQANDEFSLDDGVKALKKQVECLSKKKKLVPDETAQLADLIVALNKIESKNKAAKEQKAYVLPPVSLDKSAKILRDEIVKDGELFAYQKEFLQSDAQFRIVLKSRQIGFSYVAAADALIGAVGGRNQLFLSASEEQALILMRYLKLWSDRFGVVLAKDSETEIKLENGAIIKALAHNFRTVQGFTGDIWMDEFAWYPNPKKIWHAFVPSIGAVKGRLTILSTPFEEKSLFHELYFDEQKYKMFKRFHVDIYRAMEDGLEFDLETMKALFDADTWASAYECVFIDDESSLLSITLIKSCIDEKLSYFSPSSNTPLLCGYDIGRVSDRSTLASVINSDDTYTLAMLNVLAKASFKEQEDVLSYHLRSYPLATLDMDKTGIGLNLTETMHAKFKSRVNGVYFTAGTKEQMALNLKKLFEDKKISIPNDPLLISDLHAIKRTAGTKSFKYDAKRNEYGHADRFWALALACRKIEAVVKRKGGGAVIL*	hallmark_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0033	cloud	direct	high	1568	0.999	GCA_003048755.1_00545
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	517350	518036	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	24212	24898	GCA_003048755_1_3_520	GCA_003048755_1_3_520	-	777387	.	PF14205.6	Cysteine-rich KTR	MLCPYCNNDFKKELSRKTKCKNCQNFVFIRSINGIKTPMTEKQKDEYEYILSITPFGIFSIDFLKEAYSEEVSIAHRELKSEFGREPLLNDILWRVLNKKLIQYLSDYKFERFCITKMHMTCVLCNEEKYMQALNIMLDVIILEICGANDINIEFQNKREAFNKTLAFISPSVPYWLKKAKLFLKIKDDELKNLFFTRFEQLKQILPIPYNSETIFKGFIKELEKTSI*	hhsuite_tools	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0034	cloud	direct	high	686	0.999	GCA_003048755.1_00546
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	518063	518497	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	24925	25359	GCA_003048755_1_3_521	GCA_003048755_1_3_521	-	777387	.	PFAM:PF11114.7	Minor-capsid-protein	MNFNSAFKRFLFRIGSGVRYRAKQVAPYKTGNLKKDIQVFDEKIDSFSISVGNTKLAPYAKFVYFGTRPHVIKPKKMKALANKKSGQIFGKSVNHPGTKANPYLEKAFSEYISSASFVKAKEQLAKDIGDETVKFITSSINNIK*	hallmark_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0035	cloud	direct	high	434	0.998	GCA_003048755.1_00547
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	518507	518752	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	25369	25614	GCA_003048755_1_3_522	GCA_003048755_1_3_522	-	777387	.	.	hypothetical protein	MVADMKYFVFDSGIELIITSDKSLKDKSADVCSCVGDLTSFIEYVKTAIDDGCEHDFFFDNGEKFSGDLCSCLEYVAKKRA*	.	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0036	cloud	direct	moderate	234	0.951	GCA_003048755.1_00548
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	518737	519954	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	25599	26816	GCA_003048755_1_3_523	GCA_003048755_1_3_523	-	777387	.	PFAM:PF06152.10	minor-capsid-protein	MNNELLLSTLLKAKFDKNKSVSELVDEFIKQNAKLAKKELEAQLANLLIFINENYNIDKKVLKELVNSKISSMGLSINPNNLEEIYAVLAGKNIAVNIVFDEIDIRAINAMRNNFYWVGKEFNKDFTDRLKDIIESAFRGEVARSELAGRLKDEFASELKQSVRYFEGVSDHIISQNQNISTVNQARKYGVKYYKVVAVMDSRTSAICRSMNGRLIPAEHIERQCDNIMNAKDMASKKAAATWAKAPYNGRSDKMDSNFGMPPYHFRCRTEIVPAWVDEYESDGVTMRASEAPGKDEIIRHIDKMGVERVLTFANSNDKKHSVNLLQRTSAAKIVSALNSITHIAPHINVEQKSIAKTQNGYIIIFDGDKIDTIFPTKDNQALKKYFENYAKKDKIEVIKRWWQI*	hallmark_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0037	cloud	direct	high	1217	0.999	GCA_003048755.1_00549
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	519947	520147	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	26809	27009	GCA_003048755_1_3_524	GCA_003048755_1_3_524	-	777387	.	COG1327	Transcriptional regulator NrdR, contains Zn-ribbon and ATP-cone domains [Transcription]. 	MFCPYCGFEKTKVLNTMKGLQNKRYRVCDKCKRSFVSIEALFCDPYWQEYAKATKELGDLKGIKNE*	mmseqs_cdd	nonviral_gene	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0038	cloud	direct	high	200	0.995	GCA_003048755.1_00550
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	520179	520622	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	27041	27484	GCA_003048755_1_3_525	GCA_003048755_1_3_525	-	777387	.	PF06252.12	Protein of unknown function (DUF1018)	MNQSEYRKRLLTLIHINPLYKQIVENGAWQEWLMLRFGVESSKELSISELNLALDILQERVDDRLGFEPDIKGRRIFKKDAITQKQLKKIEVLLDVLGWDDNSARRFYYRQIGALVTNIALLNSKQATKIITGLSAVIKCEKNPKKS*	hhsuite_tools	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0039	cloud	direct	high	443	0.998	GCA_003048755.1_00551
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	520619	520825	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	27481	27687	GCA_003048755_1_3_526	GCA_003048755_1_3_526	-	777387	.	.	hypothetical protein	MSAKQREHLRNLAIKRHENALFRLKNALGYDEDFYKFKNGRLNVAKLARCAGVSEKFARRELDIRGLI*	.	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0040	cloud	direct	high	206	0.995	GCA_003048755.1_00552
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	520815	520973	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	27677	27835	GCA_003048755_1_3_527	GCA_003048755_1_3_527	-	777387	.	.	hypothetical protein	MKHTAKEIKQNGIYFTDVIAKLVQKEPKKQMDKDLANLFDQLREAIRARDER*	.	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0041	cloud	direct	high	158	0.994	GCA_003048755.1_00553
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	520973	521518	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	27835	28380	GCA_003048755_1_3_528	GCA_003048755_1_3_528	-	777387	.	.	hypothetical protein	MQNINEKLKVRLLKLQALAEQGVGGEAVSAKEILNKLLKKHKISLESLIDDEKSKEYAFKYESKFEKELLFRICAKVKDIFISDGIKYMQRKGRQISFYLTKYEFMEFEILRSAYFSSWEKCLENAQAAFVWKNKLGFKDNKRIGEVKPLSPEEIKEILNIQKMAEGMPEAQLQRNLLENK*	.	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0042	cloud	direct	high	545	0.998	GCA_003048755.1_00554
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	521585	521713	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	28447	28575	GCA_003048755_1_3_529	GCA_003048755_1_3_529	-	777387	.	.	hypothetical protein	MNEIKSDFQIYWSEYKKLKDSKNRLLPRFVRREKLKICVKGL*	.	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0043	cloud	direct	high	128	0.992	GCA_003048755.1_00555
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	521710	522198	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	28572	29060	GCA_003048755_1_3_530	GCA_003048755_1_3_530	-	777387	.	PFAM:PF07352.11	Mu-Gam-like-end-protection	MQISSFSDVDVALKRLCEVSVGIEKINGEVTLECNRIKEARKSEVERLESEKSYIEQQITLFCEDNKAEFAEKRSKEFTFGEIGYRISKSVSLPRVKAKLEALVSSIKAFGLAKECISYTEIPNKEALAELKDEDLVKLGLKRVVKDNFRIVPKIESLEIGK*	phrogs_hmm	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0044	shell	direct	high	488	0.998	GCA_003048755.1_00556
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	522212	522544	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	29074	29406	GCA_003048755_1_3_531	GCA_003048755_1_3_531	-	777387	.	PFAM:PF09152.9	nucleoside-2-deoxyribosyltransferase	MKETMRLVYVASPYAAFKSGKVNADFMACMVAKEECRKVKEAGYIPLSPVLAFSGVFSEEQRDEVLKAGLEMLSHCSYVYFSKHPASEFSKGMDIEREYARELGISELEI*	phrogs_hmm	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0045	cloud	direct	high	332	0.997	GCA_003048755.1_00557
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	522602	522709	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	29464	29571	GCA_003048755_1_3_532	GCA_003048755_1_3_532	-	777387	.	.	hypothetical protein	MIKGMFASYSKKFYEVRGLYIYVKDSDFVVDTLSI*	.	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0046	cloud	direct	high	107	0.991	GCA_003048755.1_00558
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	522720	522968	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	29582	29830	GCA_003048755_1_3_533	GCA_003048755_1_3_533	-	777387	.	PF07638.11	ECF sigma factor	MRVSLLGRLIWLSWDRKMTLKEIALVLNLSVEQVRRIEKGALLKLSHPRNFKKWQEIRELMALLEERKAKSDSDEIYQGIKA*	hhsuite_tools	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0047	cloud	direct	moderate	198	0.795	GCA_003048755.1_00559
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	522922	523791	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	29784	30653	GCA_003048755_1_3_534	GCA_003048755_1_3_534	-	777387	.	COG2842	Bacteriophage DNA transposition protein, AAA+ family ATPase  [Mobilome: prophages, transposons]. 	MSENIKKLDEFLSSNNISASALARAIGVSASLISQLRAGSYKGDSDAVNAKINAYIDNFNKKAKNFHANAKENEFYLTSDVKMANFIISEAIAEKEIGLIYGFAGSGKTTALKEFARTNPNVVLIEATCHTSAKVLLEDLCEALKIDATGGLSTKLKAVARFLKSSDKVIMVDEAEHLPLKALEDLRRIYDFSRTPLILCGTEILLKNLMGKNKELRQLFSRICGKWCMQGLSKDESEKIYIKEIFPYCKGNFRSSAKLYKKALRLAELNGCLVDESVVARALDMVILG*	mmseqs_cdd	nonviral_gene	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0048	cloud	direct	high	869	0.999	GCA_003048755.1_00560
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	523803	526259	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	30665	33121	GCA_003048755_1_3_535	GCA_003048755_1_3_535	-	777387	.	PDB:1BCO_A	Mu-Transposase	MWVNSRVAAEILAIKYDALVKAVKRAEKSGKKFCSIKPNILGFMYIDGIGRGGKTLRIDIDERIYPEIVDRISKTREGESYDVPYNAANGAKSGKGAGAYDEGADELGRRDGANAKVDRRASNGAKEAGESEDARDKSKESAGRICNEDARDGLCDKSNKTRNIWIQEEVKRDEQCGIDSNDGLLVEPCGNGVFEKIDDGNGCAATSTMYGSSTNNNSGNSLANSPLIATCSEKKRADALCKRAIVLEWDKTKGKIDESSFIKYLNTSNKYPIKVSSNKLYDWQRKFKKGGLDALVDSRSNNKSLKLEELGLSDKCEELIKSSVGKGRINITNIHKMLNYYYITSQIGELSFDEFLAKKDECVSYEVVNRYVNNYLKKNKLLKNLILYGEDGVIGRQMPALGVSNWAARTINEVVEIDASPLDMICNASDICKSIGYEAVNNIFSSKEEFESYVRQWQKRYTIIALIDTYSGVASFHISDSENSLAIARAVAKYIIRYGKPKMIKGDNGKAFKSEYMSSVLGSLEIRYEAVRAYSGWLKPYVERNFRALQHSFSENLAGYIGHNITERQAIEFFRSKKERRLKKGVKTNIAKLKELSEVQELMDLYAENFLNARYLERLNKTCNEAYNEKIADAVAMDAISLSARLSKKELKHVNKKGVSVGGVNFYNAQMFGYERVTIRENIDNINECFVWDEDDKKFIGVANVLDMDEGVSVEEAKAARKLFSKRLRDIKADASVARDKSQEEFKQMVMGLEAKRALKPELKGANNESKEIEAAKKSSRSLTKNRALDDDLLAVAGSDVKKEKKIKSWQEIVNETN*	common_virus_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0049	cloud	direct	high	2456	1.0	GCA_003048755.1_00561
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	526260	526430	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	33122	33292	GCA_003048755_1_3_536	GCA_003048755_1_3_536	-	777387	.	.	hypothetical protein	MRAYRVKQVTREVKQKLKYDLKDYCEMRGLSLSSLYKGFVSQKAKKILEKDGIKVA*	.	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0050	cloud	direct	high	170	0.994	GCA_003048755.1_00562
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	526496	527272	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	33358	34134	GCA_003048755_1_3_537	GCA_003048755_1_3_537	+	777387	.	.	hypothetical protein	MYKDTLRKKKDDSFIVKNYESNLKLSYDSIRKDYDIILTSVIPTQKNLIKTYLWLNTFILGICFFFVKEKLITSFVLFELFITLLPCVISMGILLFALYHNKEKQFIYFDPKTIANIKNDKWSYAQGLINCIKGTKEAFDFNSKIVSFRASLIRRGAAFLFLSFLFFAFTTAHISYNYFDTNYRKEVKTMADDKPPVESDGNDTTKMFLSTNNQVKVNKENFNESVEIRKSGSISITASEKPKPSSETNATVDKKDSK*	.	hypothetical_protein	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0051	cloud	direct	high	776	0.999	GCA_003048755.1_00563
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	527516	528262	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	34378	35124	GCA_003048755_1_3_538	GCA_003048755_1_3_538	+	777387	.	PDB:2FJR_A	Repressor-protein-CI	MDLAQKIKFLRSENGWTQEDLANKSGVGKSTIQLYEGKTSNKNPTNENLKKLANAFRISVSELANENLSISKSISENENLSISNKNLVRKSENLSISPTNLKNSQIQQLKEDQILICELSSKVGAGESVDINGIEVYDTTKLVPFSQMLFKTRLKNTNNLRCMQVEGYSMVPMLYPDSWVIADVTARFEGDGLYIINFCGNFMVKLLQKSPDGVLHIISINKDYQSYKIDEDSNVEVYIVGKVLRCVI*	common_virus_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0052	cloud	direct	high	746	0.999	GCA_003048755.1_00564
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	528493	529248	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	35355	36110	GCA_003048755_1_3_539	GCA_003048755_1_3_539	-	777387	.	cd06433	WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	MKISIITVVWNNAKTIRDAINSVLNQSYKDVEYIVVDGASTDGTIEIVQSYGDKIKFISEKDNGLYDAMNKGIRMATGDIVGILNSDDFYASDKILQIVANEFLNSNTDSVYANLEYVYANNPKKVIRYWKSKKYQDSLFRSGWHPAHPTFFVKSEIYKKYGMFDLSFKIAADYELMLRFFEKYKITSSYVDEVFVKMRMGGESNKSIKNIIKANIESYRAWQANGLYINPLMFLLKPFSKIVQFINKSYE*	mmseqs_cdd	nonviral_gene	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0053	cloud	direct	high	755	0.999	GCA_003048755.1_00565
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	529245	530396	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	36107	37258	GCA_003048755_1_3_540	GCA_003048755_1_3_540	-	777387	.	CDD:cd03814	GT1-family-of-glycosyltransferase	MKILIIHNKYQSKNIGGEDIVYKNELNALRKKLGCENVFYYEVSNDDINKFKLFFEIWFSKKYYKEVREIIKKNGIEIVHVHNFFPLLTPAVFKAAKDSKTKVIHTLHNYRLWCISGILYRDGFGICEICMHKKFSLSGILNRCYRKSLLQSFVAQLAFWFYKLSGVFKNIDYFFVLTNFQKDKIKSLGVDGDKLILKPNSLQMSFNTETQKYGYVYVGRIEESKGILRLLEIWDRLDEKYILTIVGGGDIEAQLRQKYKKPNIIFKGKCSREETMTIVSHSKYLLQPSLLYETFGLTIIEAMSIGVPVIGYDIGTRQDFIEDGINGFLSRPDELKSVIERSYDFESYDRLSTAAKESVKQYENEYVIEKQIEIYKNILENKN*	common_virus_hmm	common_virus	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0054	cloud	direct	high	1151	0.999	GCA_003048755.1_00566
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	530393	531418	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	37255	38280	GCA_003048755_1_3_541	GCA_003048755_1_3_541	-	777387	.	cd03823	glycosyltransferase ExpE7 and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).	MYDYLIITHIPAFYKVNLYNELAKRLKIFVIFISSDTSEKRSNNFSSVNDVLFDYEVLYQGNFQTRKIFKNILAIQTILSRVKFKKILVSGWDLPEFWYIAFMSKKGKNCLALESTVFESSYKGLKGFIKKIFLSRISTVFASGSLHYDLLKALKFQGEVKVTNGVGIINKPEFIKTQKKFSGRFLYIGRIVDIKNLKFIVEIFNAMPNFTLTIIGVGEQQEFLQSISNKNIIFRGAVENKFMGNEFAKNDVFILPSLIEPWGLVVEEALYFGLPVLVSDRCGSSELIKNGINGFVFDPANKNSLTQIIRNFDDTLLQNLCSNADSYDINAKDIQQISSYL*	mmseqs_cdd	nonviral_gene	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0055	cloud	direct	high	1025	0.999	GCA_003048755.1_00567
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	CDS	531411	532346	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	38273	39208	GCA_003048755_1_3_542	GCA_003048755_1_3_542	-	777387	.	COG3594	Fucose 4-O-acetylase or related acetyltransferase [Carbohydrate transport and metabolism]. 	MQQRVEWVDTLKFIGILSVILGHINFPLNGFIYTWHMPLFFMVSGFFIKFETHFKDFVVKNFKRLMIPYFIFSIVGLFIEILKRYLLHREALDYTHEIKGIFIDMDFAGLCNTYAFVLWFLPALFFSRVFLYLIKNKIPSLLLQSLVVVFLFMASFYIDLPFGIDNALNSFMFVYVGNIIFEKRLPNILVLLSFTVLVAIYLFGFNLNLDMASKVYSNKFLNVIWTVSFVYGLIFCIKNIRLNSKFIKIWGSNTMLLFILHPYTNNIAHIVVQKALQSDYWLFKFIISIVLLSLVIFIKEKNKNWLVFKYV*	mmseqs_cdd	nonviral_gene	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_CDS_0056	cloud	direct	high	935	0.999	GCA_003048755.1_00568
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	5902	6912	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	1	1011	GCA_003048755_1_4_6	GCA_003048755_1_4_6	+	687684	.	PDB:1SXJ_D	Activator-Clamp-Loader	MDRIVEIEKVSFENDFEVSLRPTKFEDYIGQEKIKQNLDVFIKAAKKRNECLDHVLFYGPPGLGKTTLAHIIANEMGVSIKMTAAPMIEKSGDLAAILTNLQEGDVLFIDEIHRLSPAIEEVLYPAMEDFRLDIIIGSGPAAQTIKIDLPKFTLIGATTRAGMISAPLRDRFGMDFRLQFYTSSELSRIVQIASAKLGKECDKNASLEIAKRSRATPRIALRLLKRIRDFAEVNDEQIISHERAKEGLNALGVNSLGFDEMDIRYLEILMQARRRPMGLGTIAAALSEDEGTVEDVIEPYLLANGFIERTAKGRIASAKCFETFNIKIDIEKGLFE*	common_virus_hmm	common_virus	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0001	persistent	direct	high	1010	0.999	GCA_003048755.1_00826
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	6936	8015	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	1035	2114	GCA_003048755_1_4_7	GCA_003048755_1_4_7	+	687684	.	.	hypothetical protein	MSEPHLCPRCEQRTIYFDGICYDCRQKEKLEFYENLSEDEIKQKLKNVLAHVDEIGKYGEIYSDLVYIFYLHGICDEQIIREVTKQGEYYPFEIYKNAPSDVRDELINSLNGAENIVKINHILCALAWQGDEVVRELFFKLYKAPKPWKAKLHVDTDGYAQVAGWSFDESGKRRSLVFDRCFTCQPSQNADASIKFKALNDEKCKFCSGEMLEFIIKKESLKRLGLELKNDAVLKFCPTCIGLVQYFCQNDGNNMQTEIVGEGESDDYLRDAVTTLDGQNFELASEVCAHYSYMIDSEILLGGYPQWEQDAEHLKCPKCSKSMKYIAQIPLGSLVDGEGTIYVQICDECEIVGANFQCT*	.	hypothetical_protein	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0002	persistent	direct	high	1079	0.999	GCA_003048755.1_00827
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	8231	9271	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	2330	3370	GCA_003048755_1_4_8	GCA_003048755_1_4_8	+	687684	.	pfam01594	AI-2E family transporter. This family includes four different proteins from E. coli alone. One of them, YdgG or TqsA, has been shown to mediate transport of the quorum-sensing signal autoinducer 2 (AI-2). It is not clear if TqsA enhances secretion of AI-2 or inhibits AI-2 uptake. By altering the intracellular concentration of AI-2, TqsA affects gene expression in biofilms and biofilm formation. TsqA belongs to the AI-2 exporter (AI-2E) superfamily.	MNNRLFFGIFVFCALALVVYLFKPYLLDIFIAALLAVAVSNVQIAFLSLTKNRKTLSSALTTSVLLCLFIAPLLYAVVEIAKYAAGFDINNVTKTIEFIKNYDFRMPESINFLEPKIKEFIGGLDIKMLFSQLATNLASLGKLSLKFGVDMIIILVFFFFCNLYGNELISYLKYALPLKQDDTESILSEVGNVMSVVFYSTIANMIIQGFLFAIITSFYGYDGVLTGIFFSFASLIPVVGGILAWGPISIYEFANGNTAAAITIAIYTIVVISFAADTLLKPLVIKFINSKLVKIPTKINELLIFFAMLAGITTFGFWGVILGPAIVTFFISTIKLYTLLRERNFV*	mmseqs_cdd	nonviral_gene	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0003	persistent	direct	high	1040	0.999	GCA_003048755.1_00828
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	9287	9658	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	3386	3757	GCA_003048755_1_4_9	GCA_003048755_1_4_9	+	687684	.	COG0537	Diadenosine tetraphosphate (Ap4A) hydrolase or other HIT family hydrolase [Nucleotide transport and metabolism, Carbohydrate transport and metabolism, General function prediction only]. 	MIYEDKFIKIEREDNELPWIKIFTIKPFRELSDCDEASRARLFEAMLVAEKAMLEFYKPTKINIASFGNYVPHVHIHVIARFSDDAFFPDSVWANPKRKSELVLPEFDKFAKFLEEKLRASFE*	mmseqs_cdd	nonviral_gene	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0004	persistent	direct	high	371	0.997	GCA_003048755.1_00829
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	9651	10538	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	3750	4637	GCA_003048755_1_4_10	GCA_003048755_1_4_10	+	687684	.	.	hypothetical protein	MNKYKKYFNFYIVFIFIIVLGGLFYFLYSSYMAEKMQNNMRVFFDYQVKQLNKSIDDEKFSSMAISILLAQNESIQMCLLGQSRDECIKNIENLTKTLGAASMYNNIKLHIYDKDLKSYVRSWDLNRYGDMIASSRFLVQESRHQNKPMVGIEAWYAGTHIRAVSNVIRDGRIIGNIEVLLNFDSLGNYFKKQGIDLFVLLAKDKMPSRKSIPSDQILNDYYIENLSSANLNIVGFLRDINFKEYEFYVYKTHYFCVVPLIDASNTQIGYYVLHVNTNEKERNISQNYFESEELF*	.	hypothetical_protein	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0005	persistent	direct	high	887	0.999	GCA_003048755.1_00830
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	10761	12320	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	4860	6419	GCA_003048755_1_4_11	GCA_003048755_1_4_11	+	687684	.	PDB:8DGC_F	Large-Terminase	MNLSPELYLKFAKDVEPEIFENKTPKFHLEIIRFIDGEGQYKAIAVFRGAGKTTLLNKIYVLSRLYFAAEPFIMIVSANEDKATAFLEAIKGSIDKAAAKGYAIARGKAWNKGFIEVIINQAMKDEDGKSIEKKCYVVSLSAGQDPRGMNIDNMRPTLLIIDDLESKVGRYPIDSNANRQKLRSWFYADLLPTLHPTRGKAVILGTILNGDSILNNIVNSTEEMDAKQDWTYIKIPIIRNGTSSWPSRFSIDKIKKIQSTLVSKGLANEFYQEYMCAAIDPQKAIFKREYFRYFKGVEYRTDEPFTTVTVTDGVNKQELKIRRANKIELESGEKIWLKECQIYTVADISSGKGRDQTAYVTFAIDRQNRLFIIDITSGYFTPFERSLRIIEIYLTFGPMRIGIEKAGMQNDFFYTIDTIQKLTGVNLPIDPLSHGGNSKNKRISNLEPYYRTRQIYHNASLNATDELEAQLLGFDPETESKSDDIMDAAAYILQYIAGRFFDESYDEIYDEYEEEESWV*	hallmark_hmm	common_virus	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0006	cloud	direct	high	1559	0.999	GCA_003048755.1_00831
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	12488	14161	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	6587	8260	GCA_003048755_1_4_12	GCA_003048755_1_4_12	+	687684	.	PFAM:PF12236.8	Head-tail-connector	MNEDLNLIKRAFSDLEQHKKRFLECERAFRAEYEDEDNRTTKRKNSERSHSKLYIPLIKTTIFIIHAIFKTSFMSDRCPIEITRVGRRSDNDLILQNALTAVLKNRWKKKEHRVGLSKAVMSALYLPLGIVNLFYDKEQGDIATRFIPITDLAFDKHASDINDIEYVCYKWRQSIRQVEEKIKTKFYKSKDKDRILGSKTEWSQRVQMKDIYKKIYVNGRQMWELKSFANDYLVRETRFSTLPFHFGYCMDAMPSIDESTRENENAVYGSCVPEVVKEIQKEYNIKRNQKIDITENQIDPSFIVDKTKGVVTVSDVMARKKVIRVETDMGTRVSDVIMPFPVPPTYQLSEEIAMLSKEYEIATGVNSVMTGQTGPSDRRAMGALQTVNAASSMRIESMMQTLLETMLSSYAQHFVELLYRFVSDDEFIKITEDEDIIEAIGTLAERKANRLDFDVSVNFGTTIANEVKINQLNGLLGVLAQNQISSPQITGEIVKEVLTLILGENAPIEQVDQAMAQMMAAQEAAQAEAVTQDEEEQIKNEPSEEDMEMAALVNGGI*	hallmark_hmm	common_virus	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0007	cloud	direct	high	1673	0.999	GCA_003048755.1_00832
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	14238	14768	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	8337	8867	GCA_003048755_1_4_13	GCA_003048755_1_4_13	+	687684	.	PFAM:PF17594.1	tail-fiber-chaperone	MAYKDKYEVLGIIVALATNGLSVYKKGEEEGQISGGSIGDVVVRAKDESGFASVIIISEQEWDEMPQNEAAEAEMKEVASNTKNLAPELAKAKNEIERLKAEILDAKGEAERFKEECVSLQDRISAAAGENLTLTQEIQKLEAENKKLKETAKKAEKSKDNAPKANEPQDLNLGGN*	phrogs_hmm	hypothetical_protein	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0008	cloud	direct	high	530	0.998	GCA_003048755.1_00833
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	14768	15280	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	8867	9379	GCA_003048755_1_4_14	GCA_003048755_1_4_14	+	687684	.	.	hypothetical protein	MPDIYDQDLEGLAAAEETQTQEAQTALKNADKPQVQAETKAPAAPQPDDSVKLNKEEYADFQRMRQAAQLWQMETDFRKSYPDFDMQKVTDKILEMDEKNPGTGDALLTPVGIENVYLKFFHGKAQVQVDDEFDIARGTGGGVSVKELIGKINKGEANDSEKQALYARLF*	.	hypothetical_protein	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0009	cloud	direct	high	512	0.998	GCA_003048755.1_00834
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	15294	16217	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	9393	10316	GCA_003048755_1_4_15	GCA_003048755_1_4_15	+	687684	.	PFAM:PF17236.2	Major-capsid-protein	MAIKTGLVTAEEAFGSKGVVLENTIKQIGWQSTPFYSAISTAAPADRSTSVAVGHKWFYDELPDGDAANAHAEGGAKATAKYFVGNTLSNHFQIVKNTYGVSGSQEPAKDVAGRGILANQGEMASVEHKKSIEKILLSSQTAVQRVNSGGSPVVGKCGGLKSFSTANNTIDANNTDLTMQMIRDLLKIGWSKGRPYQFLMVNDKQNDRLLDILDKIKQANITQKYLEEDLLAIRTSYGDVKVMLNPFLDQNEIIAFRADDIFKVNWRPMMTRELPTSNDAVEKEIISEFTLRVCTPVAFGWLKKLKV*	hallmark_hmm	common_virus	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0010	cloud	direct	high	923	0.999	GCA_003048755.1_00835
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	16221	16904	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	10320	11003	GCA_003048755_1_4_16	GCA_003048755_1_4_16	+	687684	.	.	hypothetical protein	MNYEAFLQRLKVSTRGDIKLPDFEELKSLVEETAADISRAVTPLEMIEIDHRNFDIEYHIDKRRFVRKFNTPKNEKDVVDFLDESLLKALIYGVAKKRAHAELYAKYNKFYLQNLCEYELNNFDENSYDLTEALRIKGWLKPYKIDYALDPYYSWDENFIKRLDYYMANIIYGQIDNSEHPEKILNSNELGYRKFIYQFIAYQNGEHIDREDLRALDRLMSKKILGE*	.	hypothetical_protein	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0011	cloud	direct	high	683	0.999	GCA_003048755.1_00836
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	16909	17943	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	11008	12042	GCA_003048755_1_4_17	GCA_003048755_1_4_17	+	687684	.	PDB:5IV5_HI	Baseplate-wedge-protein	MVDKEFTQICKEILGVSKKLEKIEPEELRKIKTDIERISEAVTADKTLFDTDKKDFDGKYNKIVEIIKTFDTLKAQIEEVLKNGTINDSAETLISTFSSKKIMDLLNEAKGVVDEKFSTIYKNGITPWSSSLDYPAGAISVFDGKLYQAKSENTNKNPSNNKEIWRVFASEEWCEQTFLNKNDKIDAYTKEESDDKFALITSLPDIATETKAGITKLKNIINAKQTDVAVSEKAVSEFVAASQSGLGIGQTWQDVKNNRKLGINYTNDTIKPIFIIVGRKGDGSPYSLKVFVSGVLVYEGRSNYNAIGVNKIASVIVPAGKTYKVEMDGVDSQTDEQFQWVELR*	hallmark_hmm	common_virus	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0012	cloud	direct	high	1034	0.999	GCA_003048755.1_00837
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	17953	18255	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	12052	12354	GCA_003048755_1_4_18	GCA_003048755_1_4_18	+	687684	.	.	hypothetical protein	MRYYKNKNNEIFAYEDDVSEELLNQRIKELGLTPISDDEANKLLEPKVDEKAKALAQLEADIKECEDDIKHALIIGNTAVLESLRNEYKELIIQREGLRK*	.	hypothetical_protein	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0013	cloud	direct	high	302	0.997	GCA_003048755.1_00838
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	18252	18518	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	12351	12617	GCA_003048755_1_4_19	GCA_003048755_1_4_19	+	687684	.	.	hypothetical protein	MNYFLICVLSLILGILLCPIVIFLRARKCEGWDSSNMTNILRVFSHLATHPDDFSRFQYEDGKKPFWYLDKDEFTDVVQTRPTQKDKK*	.	hypothetical_protein	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0014	shell	direct	high	266	0.996	GCA_003048755.1_00839
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	18546	19283	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	12645	13382	GCA_003048755_1_4_20	GCA_003048755_1_4_20	+	687684	.	PDB:5O6V_E	Envelope-protein	MHQNLTRTALALGVSALSAQNTNRAKQKKMRSQARSQKRKMMLKSKEILQLIAIILIELLLEILSFVVVPIALLFCKKDDEHLPKIFRWFEDANDYYDGKCAAINGDSGWREKHYPEPTNRTYKARLLWLLRNRIGRFSSEILGVKVDEVNPYSIQTIGDPNITSNGGKKSGFCKVTCVLKNGKKRFGFFRVVRYGKFYCRIYLGWKLMDIAGANALNFKEFTQKDDKKYLKTVWCINPLKKVKQ*	hallmark_hmm	common_virus	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0015	shell	direct	moderate	614	0.832	GCA_003048755.1_00841
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	19370	19858	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	13469	13957	GCA_003048755_1_4_21	GCA_003048755_1_4_21	+	687684	.	pfam11195	Protein of unknown function (DUF2829). This is a uncharacterized family of proteins found in bacteria and bacteriphages.	MQKYIGMKEIKAMPMNRGEYNKLRGWEVPMDENPNDEGYLVEYADGKKNHPNFDGYISWSPKNLFEAVYQNISDGFDFGSAIRFLKQGKKVARKGWNGKGMFLFLVKGSKFIANREPLLSIFGEGEEIDYCPHIDMKTADDKIVPWLASQTDVLATDWVLVE*	mmseqs_cdd	common_virus	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0016	cloud	direct	high	488	0.998	GCA_003048755.1_00842
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	19855	20232	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	13954	14331	GCA_003048755_1_4_22	GCA_003048755_1_4_22	+	687684	.	.	hypothetical protein	MNFLIANKLWLIVIGGLMGVMLGLGAEIYSLKDGIKDAKAELKEAQNELAIKEAISAVVKANLEACNAKIELQNAKFKELEIKKPDVKKTQEKARSKFDGIKPLVTQSCEEKLERCERIFDELAR*	.	hypothetical_protein	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0017	cloud	direct	high	377	0.997	GCA_003048755.1_00843
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	20216	20509	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	14315	14608	GCA_003048755_1_4_23	GCA_003048755_1_4_23	+	687684	.	.	hypothetical protein	MSWHVKITLFLVAIFSGCACKEPQIIKQTEYQDVYIAVSCIDKMPQKPERDRNDPDNQKKIAEYFKACEDLLRQCVHANVPQSSTSAAKWGEKNERD*	.	hypothetical_protein	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0018	cloud	direct	high	293	0.997	GCA_003048755.1_00844
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	20723	21055	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	14822	15154	GCA_003048755_1_4_24	GCA_003048755_1_4_24	+	687684	.	PFAM:PF05106.11	holin	MELHYLFYVLIIGCAGSITAFIKNGGGGIKILLKRTWDGCFSAYIVYEIAFFFAKDEHVSFAICGVGAWMGSEALIFVRDFVSSKAGRRYDGYDDYGGNFKHEEFGDDKQ*	phrogs_hmm	hypothetical_protein	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0019	cloud	direct	moderate	317	0.952	GCA_003048755.1_00846
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	21253	21807	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	15352	15906	GCA_003048755_1_4_25	GCA_003048755_1_4_25	+	687684	.	CDD:COG3926	Lysozyme	MADFNNAFQILMSLEFSRPEKALHKNPTEREWTFMGIYQKYHSSWKGWNEILAALAYGGDTEKISRMLFDDKDLRDEVWKFYKQKYWDRMRLGEINSQLKANEMFIFGVNADTKPAIRVAQRIAGVVDDGIMGEISLAAINKVDEEKFDKEFDRAELEHYNMLIKQNPKLRVYANGWRRRAEAV*	common_virus_hmm	common_virus	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0020	cloud	direct	high	554	0.998	GCA_003048755.1_00848
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	21804	22052	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	15903	16151	GCA_003048755_1_4_26	GCA_003048755_1_4_26	+	687684	.	.	hypothetical protein	MTIEELNEKITKQQIQIDDLKSKVLSYESSFGDINNAINALSNRISDIENNGIKTAVGGLQEEVNIQKLKINKLDRMRKGLA*	.	hypothetical_protein	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0021	cloud	direct	high	248	0.996	GCA_003048755.1_00849
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	22049	22651	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	16148	16750	GCA_003048755_1_4_27	GCA_003048755_1_4_27	+	687684	.	.	hypothetical protein	MSAINYKDNFVENFEAILASSTGERSIYQKALAHIKSEFDNFQITDDARAKFITSLMAEMTIAFTTKAMDAAGDVATKALTLEKELEALELKNQGLRDRLELDKQNLQMQIELTRAQTEKTKAETKLAEEQQVAIKEQINDNRIIKAGMMTGDFMQNVSNGNLSVPSDMFEYLFNIIDEIIKRAGINIKKVKNFNLPKIK*	.	hypothetical_protein	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0022	cloud	direct	high	602	0.998	GCA_003048755.1_00850
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	22739	23977	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	16838	18076	GCA_003048755_1_4_28	GCA_003048755_1_4_28	+	687684	.	.	hypothetical protein	MSQFIAFDDELNITNKEPDDLFSYLAGGELYANTFAAGAAYAIGRISNINYTSIFLPFFVDKISSMMELNEDFVEFALMPMQIIFYKTADENRREKEIYDEISEDTEKIVKLANRLHEKSGGKIGFAMDDGSISKRTATDKNFLRELVEQRQKGFFKQTLQNIAYTKFGVVGAIVAGWAYDGKVSGAVVADVVSQVSTAKIADVAAGLLGKALGLQAGFATLGLSMVLGSVLDEAFEVASGLDISYGFGGDIAGFNEIGHGIYEAPLSFLDGIKSMFGGVPTKDLAYDKESYQRTGQIAGIKTKFGMYIGQVGDNLVSGKEKGLNKKERDSALGMARSMARDLDKASKMSRSDKSKQRQAEKHGSSSGSSSGMSRSEKSRQRQAEKHGNAGRNSSHDRNGAGRNSASGGAMA*	.	hypothetical_protein	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0023	cloud	direct	high	1238	0.999	GCA_003048755.1_00852
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	24041	24340	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	18140	18439	GCA_003048755_1_4_29	GCA_003048755_1_4_29	+	687684	.	.	hypothetical protein	MWDFLKNLGSKASENADGLKAFGSLLGAGAGIWSAVEQGRQAKKQNDLAMKNYNLNLQILKDEKARQKQMQQNLEQGWARSAASMSDKEEEEKKKNGLL*	.	hypothetical_protein	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0024	cloud	direct	high	299	0.997	GCA_003048755.1_00853
GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote	cenote	CDS	24327	25112	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C1	18426	19211	GCA_003048755_1_4_30	GCA_003048755_1_4_30	+	687684	.	.	hypothetical protein	MGYFNIEFLRRPELSPLSPKAGYAAALGAVANGIKDVGDIGLNRQKIDDENKRYQEEKLFRNDELNFRKNSHADTMNAKSDELAYQKDKDEKDRIFNEKKLSIDELRANRDRAVDWARANTQANYYNTLAMERADRIEQQKQEDAANVAAFRQFFPNETKGKSDAEVLAIGNIMQRFSKNKTATSDDDWVKVNAATYNEYAHLGVARNTKDGYYLNKNFVDELTRESSARSEAKGNQAEYKDRQKDLSKKKPFIFGDDGEM*	.	hypothetical_protein	C1	19211	5902	25113	GCA_003048755.1|PIRW01000002.1@region_5903_25113@tool_cenote_CDS_0025	cloud	direct	high	785	0.999	GCA_003048755.1_00854
GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote	cenote	CDS	532861	533064	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C45	1	204	GCA_003048755_1_4_535	GCA_003048755_1_4_535	-	687684	.	pfam20075	Domain of unknown function (DUF6471). This domain of unknown function is found in uncharacterized proteins from bacteria (predominantly Proteobacteria) and eukaryotes. This domain is approximately 60 amino acids in length. There is a conserved motif KxxRG and a highly conserved L residue.	MTEYEKRAKVYLKTQMARADIDYPRLAELLKEKGVNESRENLANKINRGKFSFAFALIVLDVLGTKI*	mmseqs_cdd	nonviral_gene	C45	15189	532861	548050	GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote_CDS_0001	cloud	direct	high	203	0.995	GCA_003048755.1_01375
GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote	cenote	CDS	533257	534267	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C45	397	1407	GCA_003048755_1_4_536	GCA_003048755_1_4_536	+	687684	.	pfam12762	ISXO2-like transposase domain. This domain probably functions as an integrase that is found in a wide variety of transposases, including ISXO2.	MSQHFLLSSKARTISVRKMASMSENECYEYFKSIRWSSNKGNPVCPACGSASFHYFIESRLQYRCKDCFHTFSVTSGTIFHSHKLDFKVILLAIVIFSNATKGISALQLSRDLDVQYKTAWVLSHKIRESLIEQKSDDKLSGVVEMDGVYVGNYIKPANNINDRIDRRKAFKPNKRVIISLRERNLFGSGASKTKTFVLKSENNVDINTIAKSHIAPNSEIHTDENSAYDDLLAHYNLKRVNHQMEYSGINGENNNQSESFNARFRRLQYGQCHKLGTLYLSNYANEIAYREDTRRLDNKAIMDDILSRCLADNSISNEFCGYWQGNKRVAERLGA*	mmseqs_cdd	nonviral_gene	C45	15189	532861	548050	GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote_CDS_0002	cloud	direct	high	1010	0.999	GCA_003048755.1_01376
GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote	cenote	CDS	534264	534680	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C45	1404	1820	GCA_003048755_1_4_537	GCA_003048755_1_4_537	-	687684	.	.	hypothetical protein	MAESHIISALVSKHSELQGNIKYYQDIISKLKSELETIDKAIAIFDPSFKTTFIRAKRVSNASYFPHGELNRRIIECLKIKPSTINEIAEYVFKDEEVDDALIAKYKQNISSLISKLIKRGTASLFTDNGVKFYKIAS*	.	hypothetical_protein	C45	15189	532861	548050	GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote_CDS_0003	cloud	direct	high	416	0.998	GCA_003048755.1_01377
GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote	cenote	CDS	534733	535782	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C45	1873	2922	GCA_003048755_1_4_538	GCA_003048755_1_4_538	+	687684	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MKILCGCYIISEKPNYSFCYTNINEFKFELSDKFKKFDFDDFYLGLRNLYALYKTGATDNEVNEKAKELNLYGCVFVLDECHNFFKDKKDEILVWWLTYHRHLYQDIYLITQDLTLVNNEYKRIAEKFYRAVDSAKRLFSKKFRYEVFASFRLYKKDRLEVINIPYLDEVFNLYHSGQSSNKKSFVRFYFLLAIFVLIFLLIYFYFVVMSIFKPDTPAENNLSNQDKTSFPNSQKNSISDFPDIFKDTSKKNNKISSDIPEIYIYNITCVNSSCHFDEDYHLYPLSLLSYISSMYTPLYFYYEPKSHELVKYYYVFDKPVFQNLISKNNKGVSDEKLNQISNSSAAVFK*	hallmark_hmm	common_virus	C45	15189	532861	548050	GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote_CDS_0004	shell	direct	high	1049	0.999	GCA_003048755.1_01378
GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote	cenote	CDS	535733	536875	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C45	2873	4015	GCA_003048755_1_4_539	GCA_003048755_1_4_539	+	687684	.	PDB:5WQ8_J	Type-II-secretion-system-protein	MKSLIKFLILPLLFLNSLFAAEIYTDLLDFARLTSKANNIAIVTDESIHQGEYYFIYEDEVKITIAMFRKMLEAKNLYLYKKDNFYYVSSQKLPDYDLRRIELKNYVYDDVNKILGQFDLNATYSTSSNSVFFRADDYIFDQIKEAISKIDKSLEQVTFKLTITETNLKDIKDLGTNLKGLLKPLNHGDLAYYINLITSPYISNSNIIKNDDRAFFGILNFLDTNGITKIISSPVLTAKNHTEVYFSSVQNIPYLVSKTDISNLNYQKTDSYEYKDIGLKINLKPIILSDHIDFDLHLILEDILSQSSSLTPIVSKKELKSSYSLKRGDVLVLSGINKTTTSKQRNGVPILKDIWFLKYLFSVEQDSEINSVLTLTIQII*	common_virus_hmm	common_virus	C45	15189	532861	548050	GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote_CDS_0005	shell	direct	high	1142	0.999	GCA_003048755.1_01379
GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote	cenote	CDS	537106	538446	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C45	4246	5586	GCA_003048755_1_4_540	GCA_003048755_1_4_540	+	687684	.	PFAM:PF05840.12	nicking-at-origin-of-replication	MRARNLYGVSPLDVELCQAKLDSQREYMRSFSFVNVNGQVRNLLDISMSANFSDKYYAEVSNRVNVFSSFAIDYFQVPVFLTITLNGCFRGALNGDYSKFMPIDYRYLPDEVKYKAKNSAPLTISDLVAILNHQWNLFIMRYSYKFKKIDRSYIRCFEPHKKDGVPHIHALFYVPAHTIDFMKRIYTDIFYAPQNLKTNAITSEQEKNGELNGFQTSINNPSGYVMKYIQKTFINLKETQDFDELSAWYVKHKVRRFLSSRTKVPLWVYRKINFISTMQDFYHLNDLTNDHRAILEWNKKDDYIYINLPFNKEEIIYLNGRLEHYISGRLMNFYDRLKIDSQKDENAQDEIKSFGTNLKQRQILKLCDELFKSDEKPKPISRMKDYELVNYYQSLGGDVNAQHLAYVENLMLDRNLDNFTHYHKKHDLNAPDIDSFVDRFLICNEF*	phrogs_hmm	hypothetical_protein	C45	15189	532861	548050	GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote_CDS_0006	shell	direct	high	1340	0.999	GCA_003048755.1_01380
GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote	cenote	CDS	538457	538690	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C45	5597	5830	GCA_003048755_1_4_541	GCA_003048755_1_4_541	+	687684	.	.	hypothetical protein	MKKLLVDCSRYPFCYFPQLDLGIVVEEFDLYNYEEFDTTFFETYYSFSKYGLCDFSSFGDLLDAFAEKFDYDCFEHI*	.	hypothetical_protein	C45	15189	532861	548050	GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote_CDS_0007	shell	direct	high	233	0.996	GCA_003048755.1_01381
GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote	cenote	CDS	538690	539562	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C45	5830	6702	GCA_003048755_1_4_542	GCA_003048755_1_4_542	+	687684	.	PDB:1Z19_B	Integrase	MTLNELFNNYISFYELILSPTTLRSDIATYNKHFKNSLGLREIEDINFIDIQKFCNDLIKQDYKIKTIKNIVAKLKVIFKLGIKLELINKNPCDFIELPKFDNKRYFDYSIAIQKRFIKAICENTDPSCDIFFFLLHGRRKNEVLSLKFSDINFKTRTYMIPFKINKAKRNMIYKMSDELFNRLYKRFLIAKKENKLNDYVFINPMTNDKFKDLRKSWSSLLKRNNLPKIRLHDIRHLIGTYSINYLKIPIEQVSFTLGHTNITTTQKYITANVKKSKETIENLLKSISD*	common_virus_hmm	common_virus	C45	15189	532861	548050	GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote_CDS_0008	shell	direct	high	872	0.999	GCA_003048755.1_01382
GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote	cenote	CDS	539575	539799	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C45	6715	6939	GCA_003048755_1_4_543	GCA_003048755_1_4_543	+	687684	.	.	hypothetical protein	MKFYFKPKYCPYCGGTSFDDSKFLSIEDMKCDHSFSEENYFALVSVIENTKKTLKYQKLILRKMQKAMNTSKIR*	.	hypothetical_protein	C45	15189	532861	548050	GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote_CDS_0009	cloud	direct	high	224	0.996	GCA_003048755.1_01383
GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote	cenote	CDS	540202	542070	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C45	7342	9210	GCA_003048755_1_4_544	GCA_003048755_1_4_544	-	687684	.	PDB:4KFU_C	Genome-packaging-NTPase	MFQALSASSTNGGIIGNFIVSALKEVIGSIGTAVAILMMFIISLGLAFRENFIIVLRKAFVDKETKVHEERNLKEIKQKQLPKIERKRQKNNDIKEEELIEAQVLNDDEQNLDEELEPEPEKESRASTINGVEILNEVAENKKLLDQIERGNVEKPKNFVLPPLKFLNDPPKRSHSVNETEIDQQISNLLDKLRKFKIDGDVVRTYTGPIVTTFEFRPAPHIKVSKILTLQDDLAMALKAQTIRIQAPIPGKDVVGIEVPNQNLETIYLKEILESEVFKNASSSLTMALGKDIVGAPFVTDLKKLPHLLIAGTTGSGKSVGINAMLLSLLYRNSPQTLRLMMIDPKMLEFSIYNDIPHLLTPVITEAKKAITALANMVAEMERRYKIMSQTRTKNIESYNEKMKEEGGEQFPYIVVIIDELADLMMTSGKDVELYIGRLAQMARASGIHLIVATQRPSVDVVTGLIKANLPSRISYRVGQRIDSKVILDQMGAESLLGRGDMLFTPPGSPGVIRLHAPFASEKEIETVVNFLKEQQDVAYDEKFLIEEGTSGSVATGTLGEDELDELYEEAKEIILSEQKTSISYLQRRLKIGYNKAANIIEQMEKMGVLSPVNAKGQREIL*	hallmark_hmm	common_virus	C45	15189	532861	548050	GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote_CDS_0010	persistent	direct	high	1868	0.999	GCA_003048755.1_01386
GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote	cenote	CDS	542424	544739	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C45	9564	11879	GCA_003048755_1_4_545	GCA_003048755_1_4_545	-	687684	.	PRK14692	flagellar hook-associated protein FlgL. 	MRITNQLRFSQTLHDYQKNMTGVNKSYKQLSNGLKIQDPYDGAATYNDAMRLDYEATTLTQVVDATGKSVNFSKNTDNALQEFEKQLENFKTKVVQAASSVHSKTSLEALANDLQGIKNHLVNIANTSVNGQFLFSGSAVDTKPIDGAGKYQGNRDYMKTSAGAQVELPYNIPGYDLFLGKDGDYSKILTTNVRLADQTRTDISYAPKFLNDNSKIKNMIGLNYASDSVVRSDGSYNGTINPDYDFLDNSNVNFPDTYFFMQGKKPDGTTFTSKFKMSANTTMAGLMEKIGMEFGNTKTTKVVDVSINNDGQFNIKDLTKGNQTIDFHMVAATSVAPNRGAIAQNNALDAVNSLEDLETMANNVPKTVHITEFVKSKYTDKDGNATNAFDYDKVRFERKDNELIANLPQVARRTGEYATDQTKLSEVSGTKESYDRNLYPKDVDARKRELFNIDNQEINLQVKSITGTKYDIKVKMGTAGGTNTPVQFEITSTPPGGTPSAPRTLTVYNSDEFGSYRTYASDFTYRQLMDIVAMAASDNIPNPPHSENANFDTDIEKVKRDQNYNAYKEALSKTKGAVETTLDDKGRMVLTDKTKSVTNIEVTMHDAKNSDKFDGDSTGRDTAGNAGHPQGKGSVFSFNENNALTIDEPSTSVFQDLDNMIEAVRKGYYRADANSNDPRNTGMQGALQRLDHLIDHANKELTKIGSQSRLLTATKERAEVMKVNVQTVKNDVIDADYAESYLKFTQLSLSYQATLQASAKINQLSLLNYLN*	mmseqs_cdd	nonviral_gene	C45	15189	532861	548050	GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote_CDS_0011	persistent	direct	high	2315	1.0	GCA_003048755.1_01387
GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote	cenote	CDS	544880	545626	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C45	12020	12766	GCA_003048755_1_4_546	GCA_003048755_1_4_546	+	687684	.	COG3022	Cytoplasmic iron level regulating protein YaaA, DUF328/UPF0246 family [Inorganic ion transport and metabolism]. 	MALKILFSPSESKISLNTNNKFNGKNLIFPELFDKRFEILNRYDEFLKKANLDEIKKLFGLKELEESKQLRESLSQKGSIKAILRYDGVAYKHLNYRGLDNEAQKYIDNNVLIFSNLFGPILAKDEIPEYKLKQGEKLDSFEISKFYEKNFSKTVDEFLKDDDILDLRAKFYEKFYTIKKEYITFCFVKNKKIVSHHAKAYRGEVLRQIANKLVKNKNELMSLNFKNLRLIDMKKIGLKTELMFEICE*	mmseqs_cdd	nonviral_gene	C45	15189	532861	548050	GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote_CDS_0012	persistent	direct	high	746	0.999	GCA_003048755.1_01388
GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote	cenote	CDS	545751	546053	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C45	12891	13193	GCA_003048755_1_4_547	GCA_003048755_1_4_547	+	687684	.	PDB:1MUL_A	DNA-binding-protein	MKKAEFIQAVADKAGLSKKDTLKVVDATLETIQAVLEKGDTISFIGFGTFGTADRAARKARVPGTKKVIDVPASKAVKFKVGKKLKEAVAAGAAKKSKKK*	common_virus_hmm	common_virus	C45	15189	532861	548050	GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote_CDS_0013	persistent	direct	high	302	0.997	GCA_003048755.1_01389
GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote	cenote	CDS	546280	548049	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C45	13420	15189	GCA_003048755_1_4_548	GCA_003048755_1_4_548	+	687684	.	.	hypothetical protein	MNVTSLKHNFINLKDLKNPTDMLHTFNDKQSLEINNDQILSLKESIKASKVINITDAEIKEQNRHKILQKVEEILNNYSKNLIYSNNKIHSDELSRGYHFSENAYFKNIKASDSSSMLSTLKSGYLENTKFKNLNDYAYSNTLKTKYGEVEVFLDIYGDNDKLGTTKLENNSYLFSFDSNNDGVLDQKDILFDKLKVRGYDKDGNEKIANLSDVMPRVDLRQFISTNVINHNQIEREELNRKATITNNPDLYVDTKDIDYRHSYYASDPNTLFAAENRYEKIEKNDINNFFKKYAQNDGWVDLRHNNIFGKDSSFKNFAYLKVGFDDTARLSEFNPVIEPSKDYKKDENFSYTKFQKDSFMKFYKDYNAEFDAYNKMIENIGDSLKKFDENADAYISKLEKTKSAKMIAMENEFKQATGLEFSISNLKKVKKAFITNEATAAASLQDSDSVIAMKLNKDGTIRLKFDSGREIDVKELYNDTGKLNTSSELKTSINLEAKDMNNVQLNSLDFKDIGFMQGDKIVSLKDAGAIAIANLSNKFESKFLISLNNGKSISTREIYNISYLENDLKSKEKIDERDKFYKKVDIKA*	.	hypothetical_protein	C45	15189	532861	548050	GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote_CDS_0014	persistent	direct	high	1769	0.999	GCA_003048755.1_01391
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	7372	8271	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	1	900	GCA_003048755_1_8_8	GCA_003048755_1_8_8	+	62988	.	TIGR02163	ferredoxin-type protein, NapH/MauN family. Most members of this family are the NapH protein, found next to NapG,in operons that encode the periplasmic nitrate reductase. Some species with this reductase lack NapC but accomplish electron transfer to NapAB in some other manner, likely to involve NapH, NapG, and/or some other protein. A few members of this protein are designated MauN and are found in methylamine utilization operons in species that appear to lack a periplasmic nitrate reductase.	MDKYNTRATIRNVSFLSTLITTTKDGKKRPSIRFWRIFTIVLVHLLFVLSYRVDIQILEGDISASRIFGFHLADAFMSLQVFLATHEIHVNLIIGSLSILAFYIIFGGRGFCSWICPYSLISEIAEKIHENLRAKKIVKPRVFDTKWRYVFTILFLTLSFASASLTFEIFNVVGIFSRFIIYGYFHAIWFVVAMLMVEIFFSRRAWCRYVCPIGATYSVLAKPNAIKVSWDKEKCDHCLVCTDVCLVPHVLFMTKKGAKLDESKNIFRIAGADCTLCGRCIDVCHQDALKFDNGFKKLI*	mmseqs_cdd	nonviral_gene	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0001	persistent	direct	high	899	0.999	GCA_003048755.1_01907
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	8281	8934	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	910	1563	GCA_003048755_1_8_9	GCA_003048755_1_8_9	+	62988	.	PDB:1W1W_D	Chromosome-Mainenance-protein	MIDIKEVTKIFGSQRILDNVSLNVKSGEKIAILGQNGAGKSSLMRIILGEFIPNSGNIAINGVNTLKDRKGALKFISFVPQTPPPLKFNLRELCEFVCKSSNVKFEEIEKFSKLLELDLHANLNKPFYKLSGGMKQKMLIAIAFAKDSEILMFDEPTANLDVKARLSFKNLLDNFTQNKTLVFISHRIDEIANLLDRCVYMDLGKIIKEENLRSKSE*	common_virus_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0002	persistent	direct	high	653	0.998	GCA_003048755.1_01908
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	8927	9754	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	1556	2383	GCA_003048755_1_8_10	GCA_003048755_1_8_10	+	62988	.	6HZM_B	ATP-binding cassette sub-family G member	MNNLFLIAKLDVKESFRSRWFVIYAALFSALMIGFLFSGVTDSRVLGFSGLTRALLLFIQICVIIVPIFILISTVRSINQDRDTNLLEYILSFPLSLREYYFGKALGRTFVVFVPLLFALLLCIIVGFIKGVAIPWSVLTLYFGLLFSLSIIFLSLGFFISSVIKNQETGQGVAFLLWLIMLAFIDLALIGLLMRSSVDEYVIYAIAILNPIELFRIAALSLFDPNLAVIGTASYFILSTFPKATFVAYAIIYPLLLGIILLVCGYFAFSKKDLV*	hhsuite_tools	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0003	persistent	direct	high	827	0.999	GCA_003048755.1_01909
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	9890	10297	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	2519	2926	GCA_003048755_1_8_11	GCA_003048755_1_8_11	+	62988	.	.	hypothetical protein	MKKSILFLAFALLSLNANWDINMQECINKSNAKACENFTKKLSNECENKDKISCFIYADMLGRGLGIEKDTQKSFEIFRSLCDNGSSEACYELATKYLQGNGTEQSFDLSANALDKACKMGSKRACNVLELVPKK*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0004	persistent	direct	high	407	0.998	GCA_003048755.1_01910
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	10651	11796	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	3280	4425	GCA_003048755_1_8_12	GCA_003048755_1_8_12	+	62988	.	7ABW_A	Membrane protein Reductase Siderophore, MEMBRANE	MRAIIKTYHQKALKQSEISKSKIFYKVHTYLSLLFFIPLAVVCFSGAILVYKDELNSLLAPNVVNVNLNKENLSKRISFDEQREIIASELDGYEMVGINIDANPKKRDKIWLIEHNDSQKEWKFIYFDAFSGKIKSEPLAHDEGFFGVLTELHESLFLEKSGHIILTLTAIFTFFICISGFVIYRKFWLTLLRLRVNRLNIFMSDIHKMIGIFSTPILLLICISGVWWEFQMARMPEFKNDFVIDAKIYNKSLSLDELVARSKNDLAGFEPHFISLPFMQGANIRLFGYVKDQNFLHNEYSSILTYDKNSGELVSILDIKNTNLSEEILSAFRKSHFGNYNQITKFIWFLVGISPLILSISGLYLWIKRNFKRRKNEKIFN*	hhsuite_tools	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0005	persistent	direct	high	1145	0.999	GCA_003048755.1_01911
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	11777	13891	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	4406	6520	GCA_003048755_1_8_13	GCA_003048755_1_8_13	+	62988	.	COG4773	Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism]. 	MKKFLISLVALNLMQPQIFASQSDKILEAVDVVESERRDDANYFAKELVKSTTRLNLTSRQTPQSLTVLTEARLKDQGIKDYQVLLRNVPGVTLNKWDERVYPTARGFAIDYYLLDSMPSFGGFSLGANDMSLLPYERVEVVKGANGLLAGAGNPAASLNFIRKRADAKELKGNFGVSAGSYDRYGVNGDVQTPVNESGSVRARLSFTHEKSHSYMDYYNRKNSAIYGVVDSDIGDNSWLSLGAFYQELRRHGVRWGGMPAFYTDGSRTNFSKNEIFSQPWTRWDIKTLDFYADFKHYFENEASLNLSYSFRRANTDSNLLYYGGAVNLDGTGNMNDLSVYANKREENIHNVDAYANIPYEIANLSHEFVFGAMYNNYKKSSDKVSSYWLQKTTPAGLAYTARSRIDFKNLHLDDPKLPYEDQNNKDKTIQKAFYAANKLSITDELKFLLGARVSYYKYEIEGGKDNRNFTNEITPYLGITYDIGANHTLYASYTSIFKPQNVKGANDKYLDPIQGKDYEVGIKGEYFDGALQASLGIFKIVQDKLGIKTGRKNPATNADIYEAGKGVTSKGVELDLNGEITKNLSLSFGATHFNAKDANGEKYATDSSRSTANLFAKYEIRDFRVGAGAMYKSKIYTGKGADEITQKGYTLANLMLGYKFAKNFDVQLNIDNLFNKKYYEGIGKNMMVYGDPRTFNLSFNYNF*	mmseqs_cdd	nonviral_gene	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0006	persistent	direct	high	2114	1.0	GCA_003048755.1_01912
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	13971	14513	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	6600	7142	GCA_003048755_1_8_14	GCA_003048755_1_8_14	+	62988	.	.	hypothetical protein	MSVMFKVEVIYKFCLVLVLILGLCMLAFSGVNFALGEYNEYLLNAHKIAGFLILLAATLHVINRRKKLVKLINETMDVLTRSKNPSICNMDRIIASLEPYSITEISQMLGFDEAIFCETLHKNGVKFNDASQTLRQIARMNDEKIFFVLVLIIEAKFGKRFCGELKYKRGGKLKDKKMVA*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0007	shell	direct	moderate	533	0.982	GCA_003048755.1_01913
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	14521	14733	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	7150	7362	GCA_003048755_1_8_15	GCA_003048755_1_8_15	-	62988	.	.	hypothetical protein	MMQNFNEKNEFKYGKFNYEKALEIAQNCDKFKLDNDEEEMACGGERSCYDCAFRRWSKDSFICMAQASKD*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0008	shell	direct	high	212	0.995	GCA_003048755.1_01914
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	14733	15026	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	7362	7655	GCA_003048755_1_8_16	GCA_003048755_1_8_16	-	62988	.	.	hypothetical protein	MSSCALAGIGLRLSSDDGKIRGKFNLNEPKLSVAKLTELPFIEAVLDENFKELAKDEMINLDGTLKPIFWDHKATLLVRKDKNGKFRNSNIKELREF*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0009	shell	direct	high	293	0.997	GCA_003048755.1_01915
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	15463	16017	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	8092	8646	GCA_003048755_1_8_17	GCA_003048755_1_8_17	-	62988	.	CDD:COG3926	Lysozyme	MKNFTNAFYTLMSLEFNSPKDALHKNPNEKGLTFMGIYEAAHPSWQGWGQVRAAINTYGDLEKASVALYNDDALIEKVKIFYKKEFWDKMRLGEVDSELKACELFVFGVNVDTVPAVRVLQRLLGVVVDGIMGAQTLKALNNYDERAFDVDFDKAEITYYRNLVKAKPEYHIYERGWINRAEKV*	common_virus_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0010	cloud	direct	high	554	0.998	GCA_003048755.1_01916
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	16029	16391	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	8658	9020	GCA_003048755_1_8_18	GCA_003048755_1_8_18	-	62988	.	PFAM:PF05106.11	holin	MDDLINKVGIYFWVIVVGFLGGALGSINNKEQAINRGRKIVNFIVGTISSGFICWIFFEITSFFTNNNDRFSLAVGGFFAWRGTAWICAIVDKAIDKKIDSFGGGGYDDFSTKPPRDLNF*	phrogs_hmm	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0011	cloud	direct	high	362	0.997	GCA_003048755.1_01917
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	16533	16745	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	9162	9374	GCA_003048755_1_8_19	GCA_003048755_1_8_19	-	62988	.	.	hypothetical protein	MCLMGCANKEVINKYDKIPSYLLEAPMIADRNVTNQSDAGVLLIDVYSGYEKCIGQLEDIKKYEEKRDRQ*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0012	cloud	direct	high	212	0.995	GCA_003048755.1_01919
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	16705	17055	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	9334	9684	GCA_003048755_1_8_20	GCA_003048755_1_8_20	-	62988	.	.	hypothetical protein	MLSPSLYLSGFLLLTTLFLGYRYQSLDNELSVTRANLKASDEMNLRLKDEINEQDRLISLKLDTIEKVSRQKQIIEIKANKVKERVLNEDKKDMSNALDISVSYVLDGLRKQGSNK*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0013	cloud	direct	high	350	0.997	GCA_003048755.1_01920
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	17049	17687	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	9678	10316	GCA_003048755_1_8_21	GCA_003048755_1_8_21	-	62988	.	PDB:5O6V_E	Envelope-protein	MLKFKELLQILAIIAIELPLEILGYLIVPIALAFCDKNSERLPKWARYFEDASDLYDGENSAINGDSGWRKEHYPNGKNRMYFARLLWLYRNRIGYFSSRVNGVKVSDIEPSSVITQGNPRVTSNGGAVSDFCKVTCKLKDGRTRFGLFKTIRYKGFLSGFYCRIYVGWKLLDVAEMNEYNKAAFMQPDDKAFLKSVWAINPFKRVKGSNRC*	hallmark_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0014	cloud	direct	high	638	0.998	GCA_003048755.1_01921
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	17687	17827	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	10316	10456	GCA_003048755_1_8_22	GCA_003048755_1_8_22	-	62988	.	.	hypothetical protein	MRIRIKRCEICASKLDKEGNCTWDGCPKSPNYKAKEQEKPKDKKDE*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0015	cloud	direct	high	140	0.993	GCA_003048755.1_01922
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	17824	18090	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	10453	10719	GCA_003048755_1_8_23	GCA_003048755_1_8_23	-	62988	.	.	hypothetical protein	MSYFLICVLSLVLGVLLCPIVIFLRARKCEDWDNSNMTNIIRVFAHLATHPDDFAKMQYQNGQKPFWYLSGDEFSDIVKTRPTQKDKK*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0016	shell	direct	high	266	0.996	GCA_003048755.1_01923
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	18087	18386	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	10716	11015	GCA_003048755_1_8_24	GCA_003048755_1_8_24	-	62988	.	.	hypothetical protein	MKYCKNKSNEIYAYEDDVSEELLNQRIKELGLTPISNDEANKLLEPKVDEKAKQLAEIEAEIAECENHIRHALIIGNTAVLENLRAEYKELIAQREELK*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0017	cloud	direct	high	299	0.997	GCA_003048755.1_01924
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	18398	19249	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	11027	11878	GCA_003048755_1_8_25	GCA_003048755_1_8_25	-	62988	.	PDB:2FKK_A	Baseplate-protein-	MIYEKPKNEIFASDAKDGEIVEFPNVKRGWGVTENLGFIPPMEYFNAAFNRVDKSLAYQLQRGVGEWDKDLEYPIGAVVSLNGIIYISKSQNINKNPANEAEIWDIVATQKWSENQFLKKTDKIDAYTKEESDDKFAPITSLPDIATETKAGITKLKNIINAKQTDVAVTEKAVRDFVAASQSGLGIGQTWQDVKNNRKLGINYTNNTAKPIFIIVGRKGDGSPYPMKVFVSGVLVYEGRTNHNAIGVNKVASVIVPVGATYKVEMDGVDSQTDEQFQWVELR*	hallmark_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0018	cloud	direct	high	851	0.999	GCA_003048755.1_01925
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	19249	19887	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	11878	12516	GCA_003048755_1_8_26	GCA_003048755_1_8_26	-	62988	.	pfam11041	Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	MVELIWQYRKKPRARATAKLLNDEVYKAFDDAIKVAEILNIDTVSGYALDLVGRHVGVSREQQNLILKDFFAFTQAEKEQGFNKGEFYRLGNSLKGSFYLNDSDYRFLIKAKIIKNYQTGTLENSYKSLEFLLGAGNFIFDNYDMTLNLVLKNAKTTQFLINLIFKNDILARPVGVGLNVILIADKKCFGFKQNKANLAFGVGKFARIYKEQ*	mmseqs_cdd	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0019	cloud	direct	high	638	0.998	GCA_003048755.1_01926
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	19887	21008	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	12516	13637	GCA_003048755_1_8_27	GCA_003048755_1_8_27	-	62988	.	PFAM:PF04865.13	Baseplate-J-like-protein	MRVSENRIIIDELETIKERLENGFKAIYGENLELGSSTPDGQMIGLFSEALSEVNQVLNFIVQMLDPYLATGEWLDQRVAYAGLLRKTADYSRASGVTIHGASGTIIKKGTILKDKNSNLWVTDYEVTLGTEGSKAVSITSQETGAFTLNEQDELEMQEIILGIDRIVATQNSTLGADEESDGDLLLRFMQSHSINNNDDRQGLESYLLNLKGVKQCKVLENYTNQTDANGVEPHSLNAIVLGGDDTAIGEAILKKKIGGCGVQGQTKLEVEFLGAKREVKFDRPTQINPRIFLRIKRTEGVTDINTDKIKELLSSHVFNIGEDVYISRLYSIINDVKGFEVTQFTINGGQSLPVAVREICVINKNDIDLAVV*	hallmark_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0020	cloud	direct	high	1121	0.999	GCA_003048755.1_01927
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	20995	21333	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	13624	13962	GCA_003048755_1_8_28	GCA_003048755_1_8_28	-	62988	.	PFAM:PF10934.7	baseplate-wedge-subunit	MRVRAIDSEGDWLLGHKADSAAIVQNVKTQILSLYNDWFLDFENGVRWFNYLSKNPNTDKMRDEIKRQILSVEGVSSLEILNISTNERKATIEVQYRDIYDESQRLYINASE*	phrogs_hmm	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0021	cloud	direct	high	338	0.997	GCA_003048755.1_01928
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	21344	22066	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	13973	14695	GCA_003048755_1_8_29	GCA_003048755_1_8_29	-	62988	.	PDB:4RU3_A	phage-baseplate	MANGINRHKWQISQSREKMNDPNLTQIFDSGLLSFEAGVHTALPAKVLKFNTGDNTVQVELMINELKRDGVSVPLPPIDDVPVQFFRGGDFVITTPIRKGDHGLCVFAERCIDGWFASAAKSEPLDFRLHDYSDGFFLTGFSPRPEAVKDVDLDGVCMRTLSKSTYLKLTEGKIIIKGNIEQTGDYKQVGNKNLVGNFSQVEGNSISSGTITAKDMIGSGVSLKYHTHGGDSGGTTTQPN*	common_virus_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0022	cloud	direct	moderate	669	0.925	GCA_003048755.1_01929
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	22009	22839	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	14638	15468	GCA_003048755_1_8_30	GCA_003048755_1_8_30	-	62988	.	PDB:1WRU_A	Tail-protein	MRQYGRRYRLEIGNSTQSIVIDNLAISFSIEKTISEEPNTSKIEIYNLNANNRNQIANKIFNQVKLFAGYDEPRLIFAGQITQAYTSRNDLDFITHIECGDGQNDYSKSRLYTTLKAGVKDSDVVNMCVKAMSSSKQGVVDLPRDKALPRCKVLSGDIKDYLKHVAKNNDANWHILDGNLNILPKDKVINDSEGFVLSEKTGLINSPEKTDDGLRITCLLNPKLNIGSLVRIQSILSEYDGDYKIIQLTHSGDFLNDTWQTELIAINGKFHKVEKK*	hallmark_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0023	cloud	direct	high	830	0.999	GCA_003048755.1_01930
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	22836	23171	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	15465	15800	GCA_003048755_1_8_31	GCA_003048755_1_8_31	-	62988	.	7KH1_B4	Myoviridae, Phage, Baseplate complex, VIRUS	MTTTELKQTQNFNIFGMELELTLKYNEVGAVWQFDLTDLNTNKILAFNKGLAVNAPSLINKNLPFILVLVDTTKSGVNCVDFSELGERLKLYAVDKKEFNAAMSEIAKDRT*	hhsuite_tools	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0024	cloud	direct	high	335	0.997	GCA_003048755.1_01931
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	23183	23878	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	15812	16507	GCA_003048755_1_8_32	GCA_003048755_1_8_32	-	62988	.	PFAM:PF06995.10	tail-fiber-protein	MIEVTSRKIGTFRLDATEQENNKSTLRTTKNPIESGANVADHAVLEPKQITIKGKIVAYEPPSFTQFDEIMQVVRFNLPYIKTAHRFTQKAYKLYNNVKHIKSEAMRYARIFGVDKKIREIAPFLTDGKENKDNSTAKNRLQSLYEKLLEVQKSGEFLIVTTGLKTYRNMLITSIEVTTESDLYADVTLTLEEVFIVETKTAKGLNVGKRGVNLGKTEPKLKKSSLLKDIF*	phrogs_hmm	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0025	cloud	direct	high	695	0.999	GCA_003048755.1_01932
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	23878	25518	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	16507	18147	GCA_003048755_1_8_33	GCA_003048755_1_8_33	-	62988	.	Uniprot:A0A088C3U4_9CAUD	tail-tape-measure-protein-	MPLKGYIVLLDEFLYKIGFDVDSGKIKQIEQGLKNISNVAKQTAQPISDAVKAGMERNAELMAKLDQFKSNVKNWCEEAKEQTEELAAGFHEVAEAEEKVGEKAKEAAKETKKLTEKKPAVGLKQEFDGIRNKFMLIGAAAAAASGLIANYLTVPLQNIQELAKQKNKLFNITQAEIDQAKEYQGRLQESKTAMQSITTQVALKLIPVVNQSLKGFNNFLKANKALVVEGLTNVFKWILKLGQVFTNTFRFLNKVISSTIGWKAALLILVGILAVVKRAMLAAFLTNPIGWVILAIGALMLLIDDLMTYLDGGESLLGDYWKPFIEWSKKAITWFKSVKPTIEQVLNNILTIFRGIFNAIVGYFKIFIGIFTADFDLIEQGWDELWDGVKTTFKAWVETIEMIVAAFIDVIQNFFSIAWKFISAGFENLGKVIMKPFELAFKWIKDQYNKYIAPIVDTVKNFDIGQTAKDMWEETKNLFGFSNDAAKTAALPTQYADNNRTSTYNGGDITNTYNITTQNPEMVERIMQKQNQLNLAAAYHNVGGGY*	hallmark_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0026	cloud	direct	moderate	1620	0.987	GCA_003048755.1_01933
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	25741	26145	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	18370	18774	GCA_003048755_1_8_34	GCA_003048755_1_8_34	-	62988	.	pfam10876	Phage tail assemb.y chaperone protein, TAC. This is a family of putative phage tail assembly chaperone proteins largely from Haemophilus and Xylella species.	MQTYEIMINENKYVLRSANFFETKTQLQSLLGLAKDAIKMQGEDVNIDVGQIIANIGSAAFSGVENFILKYASVINAEGGEILLRNVSQAETHFNANRGDYAQLILEGLKYHFLDFLPAGAKSLTGITAYLNKA*	mmseqs_cdd	nonviral_gene	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0027	cloud	direct	high	404	0.998	GCA_003048755.1_01934
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	26145	26579	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	18774	19208	GCA_003048755_1_8_35	GCA_003048755_1_8_35	-	62988	.	PFAM:PF11681.7	virion-structural-protein	MARYQHDTIVLLINGYEITAYADGSDVISIENAADAGAYTIGASGRGVFTGSCNQSGTLTLKLLQHSEDCKFLQDLYNQQRTEFKSFSPMTMEFKDTLNGDELSGINGFFVNDGGLKRGDAHNPTEFKIAFERISKRLENGAGN*	phrogs_hmm	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0028	cloud	direct	high	434	0.998	GCA_003048755.1_01935
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	26589	28094	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	19218	20723	GCA_003048755_1_8_36	GCA_003048755_1_8_36	-	62988	.	PDB:5LI4_E	tail-sheath	MSLTIKRIVNIQLNEQGQIAKNRDFSVIAILSDDWCEAFDDVNIRFVSIASANDAALNFGSDTRATKAAKAIFSVSGVKKAIVAKWVKENKTTQATANELRGSALNVGINKLKAITGGSFKLNVGGADKIYTNLDFSSCVDFEAVATKLTAAISKDGLKAVYDAEGNRFIIRAATAGKNDNTRLGYFEKADNGDFVGGLLNLVSGKSDIYVGKDSVTQKKESLSEALDKLFNATQGFYGVYSSAILADEEVAELNEWITSAQNPSVAGYTITRKAQLESEKTNVIKKIADKDSGRFFATYNNTGDEHAGVELLAKALSTNWEGSNTAQTMKFKNLKTAGTDETITLNLAEKCDKLGVNYYTDYDGVSMIAEGVALGGKFIDEIVGLDAFNNRTQIAVFNVLKGAKKVPQTDKGQVRLIAAVKQVCEQFVKNGFIAAGQWRGDPVGTLESGDYLDLGYYVFSPSYTEQLQADREARKSVPINVAIKLAGAIHSVDILINYNR*	hallmark_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0029	cloud	direct	high	1505	0.999	GCA_003048755.1_01936
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	28091	28582	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	20720	21211	GCA_003048755_1_8_37	GCA_003048755_1_8_37	-	62988	.	7KJK_C5	Myoviridae, Phage, 6-fold neck region	MQALDLTGLKVLIAKALSVDESLVRDSYSKTLNDKTAYLTLHLLTSTQKGREYKFFEGEKEVITSTREAVVSVNAFGKNANFIIEKLNTLFYSSECLRELKILGLGLVTISPIRNLSQIVGGGVEERASIDLTLSYINRVEVSQNEIKKAEIKTADFGIKVNR*	hhsuite_tools	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0030	cloud	direct	moderate	477	0.97	GCA_003048755.1_01937
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	28521	28838	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	21150	21467	GCA_003048755_1_8_38	GCA_003048755_1_8_38	-	62988	.	PFAM:PF10665.8	head-closure-knob	MINVSELIDDSDFCQVIKRGDDEFKAVVQFLSNDEMQRLPEGERYKEAVRIDTKFNLNLQDVITYKGVNYRIINMQDWSEYGYKNFAGVRFDGLESFDSQGFERR*	hallmark_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0031	cloud	direct	high	317	0.997	GCA_003048755.1_01938
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	28835	29263	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	21464	21892	GCA_003048755_1_8_39	GCA_003048755_1_8_39	-	62988	.	PFAM:PF05069.12	Virion-morphogenesis-family	MIEKLEGKIAEIMGLSVVVGVTAKSNARSDELTNADLAMIHEFGSPAHNIPERSFLRKPLINNAEAVANLAKNAIGKFIAGEISLETALGYVGEEAKGISKEAITDGITPSLKPATIKRKKSSKPLIDTGQLINSITYEVRK*	hallmark_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0032	cloud	direct	high	428	0.998	GCA_003048755.1_01939
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	29260	29631	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	21889	22260	GCA_003048755_1_8_40	GCA_003048755_1_8_40	-	62988	.	PFAM:PF13262.5	head-to-tail-adaptor	MTTADFLNKFPEFQAVDETRIKLSLDEAKLQVTEKIWGRFYEVGVLHLAAHILAMQGALSAEATTSPQPLREIGSKAVGSLSVSYTSGKTGFESESGSYYLTKYGQRYLELKKLVTPHFGLVR*	hallmark_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0033	cloud	direct	high	371	0.997	GCA_003048755.1_01940
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	29634	30584	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	22263	23213	GCA_003048755_1_8_41	GCA_003048755_1_8_41	-	62988	.	PDB:5WK1_D	Major-Capsid-protein	MKIRDEEILSQLATAAATFNEGFKEREYPEVQLAKFMSITSKGGENVDEIEYGETDGTQDLDNGLIDENTTSLETEDVYINAKKAPCLVWAKGAIYTAEAVARAARLDINLDDAKLRNLERVALLTMQKTALIGHAKVKRVTGLLTNGAVKKQDFTGGSNKALSAMTGVEARDFFLKLIDLGYERNGGLVVPDTIAVDSRDLMGLAGKYDDTIGGGKFAVNVLANIKEAIKESAGVDVDIVGIPLGFARDLAGKGKNRAAVYTNAEDVVSADWAMHPQAFPPFQRSVLSWEIAVKAKFTGCLIRSLDKIFYADYKA*	hallmark_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0034	cloud	direct	high	950	0.999	GCA_003048755.1_01941
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	30586	31029	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	23215	23658	GCA_003048755_1_8_42	GCA_003048755_1_8_42	-	62988	.	PFAM:PF11133.7	virion-structural-protein	MGYLDKRAFAGQVARVGESPVITKAVVNKDTDDIGFGVFVCVKDNGAAKLTASDDNILGVTLKVGVKIANKPGEVLSVMSLPHGAEIWVQGKEDHGLAVGDTIQIEATAGADAGKVAKAATLALTAAKDKFYVTDVAGDLVKLMRKE*	phrogs_hmm	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0035	cloud	direct	high	443	0.998	GCA_003048755.1_01942
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	31029	32099	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	23658	24728	GCA_003048755_1_8_43	GCA_003048755_1_8_43	-	62988	.	PFAM:PF09979.8	head-maturation-protease	MASIEPMEYLGEEIGRTSGKVYKVFRDEKEVFSPETIKSFEGKPLTLTHPDDDVTAKNWKDTAIGHIQNVRREGNFLVGDAYINDEIAIKIIKEQGIKEVSCGYDSKLIERDGKIWQTNIRGNHLAVVAEGRAGKDCKLGDSKRIKMKFINKLKGALTAAKKFKDNDEVGKEKVEEANEANNELVDLLEQALSGAEEVSTKLDETTAELEKTKTELADVKAKNVKDSDGTDENAEIAELKAKVEALEKENAELKAEIEKLKGEAETTEAVTDAKANFSHIKLSDAKNARSVYEAVILDSKAFEASELKKLSDSEIKAIYMGMRVSAKNKDNSGSVLDKFYDAKPNKIDLNKKFGGK*	phrogs_hmm	nonviral_gene	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0036	cloud	direct	high	1070	0.999	GCA_003048755.1_01943
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	32148	32972	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	24777	25601	GCA_003048755_1_8_44	GCA_003048755_1_8_44	-	62988	.	PFAM:PF04233.13	Minor-capsid-component	MKPTLSELFSKKRNKEFKPVQPSKRAEVKYRNALLLLIASLKTALLKRLRAFLLGNPSDAEIIEHTTQILDGLRKADTLDYAKRLSRGVVSAVNETNKERLIQNVQKGTDIDLTPFVGDTAVKGKLDEYVAKNVSLITSVKNDYLSDVEKAIRESYLKNGRAENLATIIHERTGVSKSRARLIARDQTAKINAELDQERMQNLGVKLYIWQTAKDERVRHTHANMQGVLCRFDDDSVYSKDGGKTWIKREADKPKCKPGVDIQCRCFAKAILGV*	hallmark_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0037	cloud	direct	high	824	0.999	GCA_003048755.1_01944
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	32953	34188	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	25582	26817	GCA_003048755_1_8_45	GCA_003048755_1_8_45	-	62988	.	PDB:8HDS_J	Portal-Protein	MGQKITDSLENLVTKMGQMTANRDYTPLLVTNTQLLNAYNNGWIAKRYIKKTIGDMLKMGREIDWDDIDEERKKEYYDACNKLEIDGVIKDLLFNVLLYGEAAILAVTDANEEAYQLPLMPNEAIKQFIVFGKGEFKARNAEHKFNRPSLYDVKGVKTHISRLCIVQGGIKSYGVEQRESISDIATALDVIKMFDTITLSVSDLIEECKIDIYKMHGYNEQIATGNEDEILKRLKLINSAKSYTNAIAMDMEDDYLTKENNLTGIAELWSKSCIVVAGALNRPISILFGEGAGGFSSGEEDNRAYYETINELQNTLLRPVYDFIDPFILGETLEYDFYSIDSLNDKEKAEILNIKSTALGNLLDKGVITEAIILKELKDEGLIKNISADDITEAELLAQKLDEPADETDLI*	hallmark_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0038	cloud	direct	high	1235	0.999	GCA_003048755.1_01945
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	34234	35454	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	26863	28083	GCA_003048755_1_8_46	GCA_003048755_1_8_46	-	62988	.	PDB:5OE8_A	Large-Terminase	MIIDLNTAPIFESLLENKRYKGAKGGRGSGKSHFFAECIIETMLINPNARIVCIREIQRSLKFSSKALIESKINSLGVSEYFDVTLTEIRAKRGNGLIIFQGMQDHTADSIKSLEGFDIAWVEEAQNLSKRSLELLRPTIRKENSELWFSWNPENETDAVDSFFKQMQDNGATDFVLIHANFNNNPFLPAELFNEQEYDRRFNPSTYEHIWLGGYNTKSDALIFKGKFRVESFSTDGLGNPYHGLDFGFANDPTAAVRCYIHDRKLYISHEAGAVGLELDYTAEFLKERIENIHKYVIRADNARPESISYLKRHGLSMITPTIKGKGSIEDGIEFIRSFEAIIIHERCVETAREFRLYSYKTDPHSGDILPQILDENNHYIDALRYALEPLIKSKTTIWGHITSRS*	hallmark_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0039	cloud	direct	high	1220	0.999	GCA_003048755.1_01946
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	35451	35960	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	28080	28589	GCA_003048755_1_8_47	GCA_003048755_1_8_47	-	62988	.	PFAM:PF10654.8	DNA-binding-protein	MAKPLPPYKWDEIKADFEAGMSQAELRKKYNIPAGTLGNKIKRDNWQLSQTQKAALDEFKKASGKVCESLSQANETQKKEMAQQINATLENLEIIANNRKIAKAFQSLIVRGISDKRYATPTEIKQGTSALKDLETIANPQSSKIEITNTNAQQNEVTEIRRTIVKLDK*	phrogs_hmm	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0040	cloud	direct	high	509	0.998	GCA_003048755.1_01947
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	35953	37179	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	28582	29808	GCA_003048755_1_8_48	GCA_003048755_1_8_48	-	62988	.	PDB:5HFJ_C	Adenine-specific-DNA-methyltransferase	MPYANNARTHSEEQVAQICASIREFGFTNPLLIDESGGIIAGHGRLAAAKILKMDEVPTIELKGLSEAQKRAYVIADNKLALNAGWDEKLLKAELEALQNLDFDLELTGFSEGELNEIGLLDNEITMDAGKADDVPELEDTPVIKLGDLIELGHNYQHRLLCGDSTDEASVNKLMNGKKSDMVFTDPPYLMDFTGGVNADGSKSFNSKWGKIKNDKMSQKESGDFLNKIIKTIKNNNNGAYYISFYRLGLDGLFKAMAENDLKYKALIIWYKKGGTLSNSDYKSNYEPIICGWIKERNFYGGKAEWDFWDIEKTKKNDLHPTMKPVVLIEKAIFNSCKTKQIVLDLFLGSGSTMIACENLSRQCYGMELDEKYAQVIVQRYVDYTNNPKIKINGKEVDWHKYKEAANG*	common_virus_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0041	cloud	direct	high	1226	0.999	GCA_003048755.1_01948
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	37222	37581	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	29851	30210	GCA_003048755_1_8_49	GCA_003048755_1_8_49	-	62988	.	.	hypothetical protein	MDLPNLKHLDVFYAVLDKFYPDWEKREDHYYLTEISFLIREVLNSPYTDETVINNLRVSEVKKYQAELNTLLNTPKEFLDWVLKHRMTADRRKMCQSKYLNTKPKRKYKKKKYQQPTLF*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0042	cloud	direct	high	359	0.997	GCA_003048755.1_01949
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	37586	37966	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	30215	30595	GCA_003048755_1_8_50	GCA_003048755_1_8_50	-	62988	.	PFAM:PF06356.10	Endonuclease	MRIGNVSAIVRNKYHNRKTKGFDSAKEWRRNQELETLQRAGEISELNRQVPFTLMPSYTIADKTTKQGFRTIREIRYIADFTYRLKNGKRIIEDVKGMQTEVFKIKRKLLERKIALGAIEGEFRIY*	common_virus_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0043	cloud	direct	high	380	0.997	GCA_003048755.1_01950
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	37935	38195	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	30564	30824	GCA_003048755_1_8_51	GCA_003048755_1_8_51	-	62988	.	KOG4768	KOG4768, Mitochondrial mRNA maturase [RNA processing and modification]	MRLARSKNRAYQLRLLEAYPLCQICEKQQSIECHHVRYGRFGADKDDSKQIAVCRECHQWCHAHKHESIEKYEEVADENWQRFGDC*	mmseqs_cdd	nonviral_gene	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0044	cloud	direct	moderate	255	0.977	GCA_003048755.1_01951
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	38192	39073	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	30821	31702	GCA_003048755_1_8_52	GCA_003048755_1_8_52	-	62988	.	PFAM:PF00145.16	DNA-methyltransferase	MEREAQGRRNKGAVLMNTFNSAPLPFQGQKRNFIKQFRELIKDEFRAHQNGIFIDAFGGSGLLSHNIKQIYPNARVIYNDYDNYSERLANIEVTNEILQAIEPITKKYKKNEKVSGEDREKIIKIIDEYIKRGYFIDWLTLSSRLLFSGKYAHNEDELKKEKTFFITSTGMSLYQVNGYLKGVEIVRKDAIELIKEFENKDVVLVLDPPYLQTDKTGYKCFWGLRDFLKLIRLAREPFIFFSSENSDILPYIDDRIECGDEVFKGYGLKQAILANGQAKTDYMIYKSGARGLF*	phrogs_hmm	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0045	cloud	direct	moderate	837	0.949	GCA_003048755.1_01952
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	39028	39210	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	31657	31839	GCA_003048755_1_8_53	GCA_003048755_1_8_53	-	62988	.	.	hypothetical protein	MKAIYITIAESGASIIAKVADENKKILDSFEISRKDASGVLEIMRKWNEKHKGDETRGLF*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0046	cloud	direct	high	182	0.995	GCA_003048755.1_01953
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	39212	39850	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	31841	32479	GCA_003048755_1_8_54	GCA_003048755_1_8_54	-	62988	.	.	hypothetical protein	MSEREQIICELFGDSRGFLTPSRLAKYSLLLKNVATSELIKFSVFAEKYRKEYQNTDALLFRATMEWSKIVFLKMREKGLRFFNDVDTLAAFCKEIYRGTRLCNGGTGSGFLESTIISVDTNGVLRNECVLENGVFQRLTNDEESHLFEYLLEHQEKIGVVQIKTRESEVKQNQIAENNANLLPADPDAPLKISDETRQKFLEIRKNIAKRA*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0047	cloud	direct	high	638	0.998	GCA_003048755.1_01954
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	39847	40686	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	32476	33315	GCA_003048755_1_8_55	GCA_003048755_1_8_55	-	62988	.	PFAM:PF09681.9	replisome-organiser	MSKTYYWLKLKKDFFDDPKILKIRSVAGGDTYTCIYLKLLLKSLDNDGVIFFDGIEPTIEAEIALKIREQEINVKAAMAIFESLGLLQKGEGEDVRLPEAASLSGKECDSAKRVREFRAKQKEVKALHCNSAVTSGNENVTLEKELELEKELEKEEANASTYVRACEGEKKPAKRFQKPTLDELIAYKQKANLVLVDCEAFFDFYESKGWVIGKNPMKDWQAAMRNWERTERERGGKCKNTPTNTSLATRETMVAGEMDDAYFERVANEIISGERKMAL*	rep_hall_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0048	cloud	direct	high	839	0.999	GCA_003048755.1_01955
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	40699	41511	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	33328	34140	GCA_003048755_1_8_56	GCA_003048755_1_8_56	-	62988	.	PFAM:PF04936.11	HNH-endonuclease	MNLSDFSKEQILRERRRLSDMKKRCNDPKNKDYKFYGARGIKICEEWMNNPTSFYLFALKENKGQEGLTIDRIDPDGDYEPSNVRFVSRHKNCVENFVGKQGKDTPNFRIYAKHGGLYENQYEKKHFKYVCRHFCNQRRKGGWSLYESLNVPVGQRREIFWYNIEKRKTEFFNEIFLNLKDQLAIYPELGSPRACPKCKEESMFLKMDYPVRMECACGYRLDLQTVKAKFSARHAPRVSKVKINAILKKSKYEPRTEYISSLGAQSGIEI*	phrogs_hmm	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0049	cloud	direct	high	812	0.999	GCA_003048755.1_01956
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	41602	41871	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	34231	34500	GCA_003048755_1_8_57	GCA_003048755_1_8_57	-	62988	.	7BZH_A	Sul7s	MVASNSLEAYNKLKPELSGKRRAVYEMFCQHKEGATRQEIARWYNVAINSVCGRVNELVERGYLIEIGSKKDAISGCSTSILKPAERIA*	hhsuite_tools	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0050	cloud	direct	high	269	0.996	GCA_003048755.1_01957
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	41858	42091	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	34487	34720	GCA_003048755_1_8_58	GCA_003048755_1_8_58	-	62988	.	.	hypothetical protein	MKQTEYRKKIRKWLGKFYKSAGTCNTYACGSNNKKPNGDVRYAALQELGHPFYAWGDKLNAYILEAEKQEKNKNGSE*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0051	cloud	direct	high	233	0.996	GCA_003048755.1_01958
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	42201	42872	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	34830	35501	GCA_003048755_1_8_59	GCA_003048755_1_8_59	+	62988	.	PDB:2FJR_A	Repressor-protein-CI	MKEFKDKLSDLLKEKGINTIQFADILGISQPLVSQWLAGEKRTKKHLLPLAKFSGYPIAYWLDDTIEKPTEAHKYTDNISSNSTKTVYIPFYKDGVVSAGRGAENDDFGEPELLPFNPNDLKIMFNVSPHAKLGIVPCFGNSMEPTIKESDLVVFCDDINQIEGAIYVCKYENEIFIKRIKKRPTLALISDNKDYEPIIIEEELNVEILGRVVGCYAINSKRI*	common_virus_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0052	cloud	direct	high	671	0.999	GCA_003048755.1_01959
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	42969	43220	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	35598	35849	GCA_003048755_1_8_60	GCA_003048755_1_8_60	+	62988	.	.	hypothetical protein	MTEKEFKEKYNELVENGYFFIYHRATANTLKFNSLCAKFNLPIIKVAKIGKFYHNEYCDMYMFYSEDRLSYYDAEKIMDDNFR*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0053	cloud	direct	high	251	0.996	GCA_003048755.1_01960
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	43233	44081	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	35862	36710	GCA_003048755_1_8_61	GCA_003048755_1_8_61	+	62988	.	.	hypothetical protein	MDIKFYFYKVVGDIDKNLFDYSLEKYFSNGLSLQDGLIAINENKGFLDSVNGEKNIFIFQKFRKDFNPIIKDEVTGKTREIELNETEYIIEQNYLFWDFKNDIIIYQKTTGGFTTTAFETYIKELLKGKFKDDFFALKPIISRSGYEKLVNSDIIKSYDIALANPSVKILQELGFDDKGILKIDNDDLGRIEIKITAKRGRGLLGADIFKKLLGNKEKYSRMRVKTSTSYLKSGVLIDLLDEFYTVSVNIREVKRRVLQDDMVIVLQDIYEKHIKEVSELST*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0054	cloud	direct	high	848	0.999	GCA_003048755.1_01961
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	44242	44373	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	36871	37002	GCA_003048755_1_8_62	GCA_003048755_1_8_62	-	62988	.	.	hypothetical protein	MPNSKKDTTQMAIFAPEPIISDLTNQSKHIVAPLIKFQKIELL*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0055	cloud	direct	high	132	1.0	GCA_003048755.1_01962
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	44481	44924	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	37110	37553	GCA_003048755_1_8_63	GCA_003048755_1_8_63	+	62988	.	COG1525	Endonuclease YncB, thermonuclease family [Replication, recombination and repair]. 	MTAFKPLAILVIACPLFAFPAKVVKISDGDTITVLNGKEQTKVRLYGIDAPEKKQDYGQKSKQFLASLIAGQMVEVEPKGKDRYKRTLGIIHYKGQDINAQMVLNGYAWAYVKYSRIYVDQEKLARENKRGLWQSSDPTPPWEWRKR*	mmseqs_cdd	nonviral_gene	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0056	cloud	direct	high	443	0.998	GCA_003048755.1_01963
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	44928	45629	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	37557	38258	GCA_003048755_1_8_64	GCA_003048755_1_8_64	-	62988	.	.	hypothetical protein	MSVRISKSIMGIRFSTNLLSDTSPKERRPTQAELAAEDKEQFLKKISDICNNSWLPFLEECGYTKQTIFYAFNNGIELFDFVADEENQTIFSSLFDQKQELETLLNKVKFSNVLTAKRREEMTDIVFKIYDLINTAKRIYSDESVLKIIAERKNKPYDVVLKEKNKYKITRKKMSFFKKFLYWFFIITFLGAAVTGIGEVSKKETLNGTEFFSLLIPICIAWFLYIRYKKAKA*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0057	cloud	direct	high	701	0.999	GCA_003048755.1_01964
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	46080	46424	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	38709	39053	GCA_003048755_1_8_65	GCA_003048755_1_8_65	+	62988	.	.	hypothetical protein	MQNINDLEQVLESLKALIKAKKDYEKLSTKYANVSFKDVTRSQRARINEKLGDAAFDVKVKTDNLHADLVDAYLCDMKERYEQRELGQSAGLGHIYRAAYLPKVPKRYKNEKAN*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0058	cloud	direct	high	344	0.997	GCA_003048755.1_01965
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	46500	46847	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	39129	39476	GCA_003048755_1_8_66	GCA_003048755_1_8_66	+	62988	.	UniProt:tr|M4QU91_9VIRU	Uncharacterized-protein-	MSLSYDLACAESDVAHINLDKEYDELISDILAVYNLHRYTFKNALGENSGEIVDLLIEHCKKDFFAYAALVYVLCVEVGISNEAFLSYTTTYKQTLKKLREEAERDAILHTKEAC*	common_virus_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0059	cloud	direct	high	347	0.997	GCA_003048755.1_01966
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	46910	47542	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	39539	40171	GCA_003048755_1_8_67	GCA_003048755_1_8_67	+	62988	.	PF12083.8	Domain of unknown function (DUF3560)	MANFKKYCPNVWVAECEEKHEKGEFITLETQYGKEVECEVYNLVAEKNGKFYYSIVRLEEASYAERRAEKYRNSQNLHESKSHEWHEKSQEGAEFLRLAEPIKIGHHSEHRHRALIERNWNRIGNAVREQKIADEKACKAEYWETKVEEINLSMPESLEYFSAQLEKAKARQQGLKNGTIKREHSYSLTYATKAVKDLTAKLEIAQKLWA*	hhsuite_tools	nonviral_gene	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0060	cloud	direct	high	632	0.998	GCA_003048755.1_01968
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	47607	48413	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	40236	41042	GCA_003048755_1_8_68	GCA_003048755_1_8_68	+	62988	.	PDB:3H4R_A	Exonuclease	MLTNKEYHARPEISKSDLDLLARSPLHLKMKNELRSEPTKALLLGSAVHKLVLEPKDFSNEFCVEPDVDKRTKEGKAIYNDFLENLGDKTSLDLDIFGSAVEIANSVNSMRETAIFLKDGLAEQSYFSEINGVAVKCRPDFYNEKMGAAIDLKTTSDASATGFARSVASFNYHIQAAFYSDILRSLGKEVNYFLFIAVETKAPYFVGFYELDAAAIEQGRKTYLELLELYKYCKERDEWWGYAKKDGDKIEAVQTLSLPALKFYEQIA*	common_virus_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0061	cloud	direct	high	806	0.999	GCA_003048755.1_01969
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	48433	48651	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	41062	41280	GCA_003048755_1_8_69	GCA_003048755_1_8_69	+	62988	.	.	hypothetical protein	MKVKASFRGIEIETDVEPVNDGYFNLDFDGAYLMEIFYDGKEFAPTGKIMDGWGNSGVPFIDSEVKIERIDK*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0062	cloud	direct	high	218	0.995	GCA_003048755.1_01970
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	48648	49523	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	41277	42152	GCA_003048755_1_8_70	GCA_003048755_1_8_70	+	62988	.	PFAM:PF03837.13	RecT-protein	MNQIQEYQDRKTELEVKKFELEQRKAKAFVATDFFPTHLRKGNETANIGTAIIVFDLAQRMNIGALEVAQSIYIIHGKPSFETKFLVARLNSSGLLKGRLQTIVSPDGNSAHCEAIDAQTGQLLKGTTITMEMARREGWLSKNGSKWQTMPELMMKYRAQSFFINEFFPEVKYGLKTSDEVGDIVTFEPNEQSKTPPKAGLNELLSSSEKLNSSVGAKNLQTEYIEAAPVEVEIDVNADILPLDALQSEMMNRGASEVEAEKLLARVSPDEAKAYLADPNSIDALMENLRS*	common_virus_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0063	cloud	direct	high	875	0.999	GCA_003048755.1_01971
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	49526	49720	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	42155	42349	GCA_003048755_1_8_71	GCA_003048755_1_8_71	+	62988	.	.	hypothetical protein	MKALGILSALFAGLNGIDDFQGAPQTKKSKAHMPHSKTRRTKGAYDKSQRIRANRRKATRCLTK*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0064	cloud	direct	high	194	0.995	GCA_003048755.1_01972
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	49705	50190	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	42334	42819	GCA_003048755_1_8_72	GCA_003048755_1_8_72	+	62988	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MFNKIVLVGHLTRDIELRYTQGGAAIGSCGIAVTHKYTLNGEKREETCFIDITFFGKQAEIANQYLGKGSKLLVEGRLKFDQWTDNNGQNRSKHTVAVENMTMLGEPKQSNQGYQRDGYSNQRPQQVAPKKPQQQKPPESCDVPEVDIDAGKYDNDETIPF*	common_virus_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0065	cloud	direct	high	485	0.998	GCA_003048755.1_01973
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	50199	50567	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	42828	43196	GCA_003048755_1_8_73	GCA_003048755_1_8_73	+	62988	.	PFAM:PF09152.9	nucleoside-2-deoxyribosyltransferase	METFKIYVCSPYSVFGDDKKKAREVAIKALAEANEYFNGDERYELFSPVLNNAAYRNLSYDEVMKICLKQLDSYGAIFVPSAKSCDPDITQSSKGILMEMNHALLNGYAIYDPGALFGAIEI*	phrogs_hmm	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0066	cloud	direct	high	368	0.997	GCA_003048755.1_01974
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	50577	51026	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	43206	43655	GCA_003048755_1_8_74	GCA_003048755_1_8_74	+	62988	.	.	hypothetical protein	MTTAELKDAAIFIMAYSFLQMDSTEKLGLFINKKASKFIDELIETMTPIVEYYREFRKRIDTQISALDNKARMRKDDFSTTAPQLACDLLYLRLAPNERKGQRLAPILADFYAANKEKIAYISNKSCDTKYRKEAEDSQMLAYFYIENI*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0067	shell	direct	high	449	0.998	GCA_003048755.1_01975
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	51037	51150	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	43666	43779	GCA_003048755_1_8_75	GCA_003048755_1_8_75	+	62988	.	.	hypothetical protein	MFWQKTDKEKLMELLEWFLSHNWEFKKRRLQKSAASQ*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0068	.	unmatched_CDS	none	0	0	.
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	51274	51732	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	43903	44361	GCA_003048755_1_8_76	GCA_003048755_1_8_76	+	62988	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MKDIKFKAYIYDLTNEDSHPLEIDVRAGKLWDVASINFKDQIVEIIDDDGNVWEYTLNDEIALVQYTGLKDQNGKEIYGGDIVRFYPQAPRSEELPNPRYGEMGEIFFDIGSFVVRPIDREREILEFFLNELGDWVVVGNIYENKELLEKEN*	mmseqs_cdd	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0069	cloud	direct	high	458	0.998	GCA_003048755.1_01976
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	51732	51986	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	44361	44615	GCA_003048755_1_8_77	GCA_003048755_1_8_77	+	62988	.	.	hypothetical protein	MGNSNNTFTWVVLGIIAFIGTVIIYSFKYLGKGCNYIGAGLLFVYMLYIALPILILFNFKRFLENPRKFIKNMVIETTLEMMED*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0070	cloud	direct	high	254	0.996	GCA_003048755.1_01977
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	51988	52299	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	44617	44928	GCA_003048755_1_8_78	GCA_003048755_1_8_78	+	62988	.	.	hypothetical protein	MTDFKQETIELIGDHKVDEYFLKYKESWGITEDLAYKGKDKIDWDAIPKPELTYDGGYGTQNWRGFITFKDTPDWLEREEYDGMEWWVWRSKPSLEKVRRKNK*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0071	cloud	direct	high	311	0.997	GCA_003048755.1_01978
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	52296	52478	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	44925	45107	GCA_003048755_1_8_79	GCA_003048755_1_8_79	+	62988	.	.	hypothetical protein	MSSPEKERHLSALANLEAFCEAHNKKTKLVEQIQGLLFKCDVRYLRHALRDLKDYIKDKK*	.	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0072	shell	direct	high	182	0.995	GCA_003048755.1_01979
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	52475	52657	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	45104	45286	GCA_003048755_1_8_80	GCA_003048755_1_8_80	+	62988	.	PFAM:PF13591.5	excisionase	MSDKFITRDEALKELGISTRSLYDKVKQGVIIANKINSRVIYYSLKSIHAYKSGKATQAI*	phrogs_hmm	hypothetical_protein	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0073	shell	direct	high	182	0.995	GCA_003048755.1_01980
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	52631	53821	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	45260	46450	GCA_003048755_1_8_81	GCA_003048755_1_8_81	-	62988	.	PDB:1Z19_B	Integrase	MPKLSRQLTITQFKNLKAKEKPYFVSDGDNLLIKIMPNGTKFFIYEFRENGKRHRLTLGKYDEISLSEARDKRSELRLKLNQGESLTQTVEKTKFKAVFEAWYKTKSKLSEKQQFWMKRRFETLLLPKLGEMDIKEISRKDIIFAISPLLEDEKLETADRVLSILNGFFKYALLHEYVDHNIIADIDKKTLLGRREVKHFAYLKNDDEIRAVLMAIRDYFGDIRVKTCAIFQLYTAVRGQNARNAKWSQIDFENCLWHIPADEMKMAKPHEVFLSKSVINLLKTYRERLPLKSELIFPSIKSNVAPLSDNTIRIMLRNLGFNKEMVTPHGFRATFSTVANENIDKHGCNSDVIELCLAHVENNKVKDAYNHAKNLKARAKLMQWWSDYLDSLGGFA*	common_virus_hmm	common_virus	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0074	shell	direct	high	1190	0.999	GCA_003048755.1_01981
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	CDS	54620	55423	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	47249	48052	GCA_003048755_1_8_82	GCA_003048755_1_8_82	-	62988	.	cd07331	Peptidase M48C, integral membrane endopeptidase. This subfamily contains peptidase M48C Oma1 (also called mitochondrial metalloendopeptidase OMA1) protease homologs that are mostly uncharacterized. Oma1 is part of the quality control system in the inner membrane of mitochondria, with its catalytic site facing the matrix space. It cleaves and thereby promotes the turnover of mistranslated or misfolded membrane proteins. Oma1 can cleave the misfolded multi-pass membrane protein Oxa1, thus exerting a function similar to the ATP-dependent m-AAA protease for quality control of inner membrane proteins; it cleaves a misfolded polytopic membrane protein at multiple sites. It has been proposed that in the absence of m-AAA protease, proteolysis of Oxa1 is mediated by Oma1 in an ATP-independent manner. Oma1 is part of highly conserved mitochondrial metallopeptidases, with homologs present in higher eukaryotes, eubacteria and archaebacteria, all containing the zinc binding motif (HEXXH). It forms a high molecular mass complex in the inner membrane, possibly a homo-hexamer.	MKKFLLTLLATSLLFTGCSSVTKAGVVGADRKQFMLVSSEAMEQSSAQAYVKTLTAARSKGELNVDPILTKRVQDIAKRLIAQTGVFRDDALKWKWQVNVINEDTLNAWCMPGGRIVVYSGIIKRLNLTDAQLAAVMGHEIAHALREHSREQASTDQMKSIGIFAIATATGLGDLGANALNLASEYTISLPFSRSHETEADHIGTELMARAGYDPKEAVEVWVKMSKMSGGKVPEILSTHPSNESRIKDLKEIAAKLEPVYQAAKRS*	mmseqs_cdd	nonviral_gene	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_CDS_0075	persistent	direct	high	803	0.999	GCA_003048755.1_01983
GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote	cenote	tRNA	498042	498114	GCA_003048755.1	PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755.1_PIRW01000001.1	GCA_003048755.1|PIRW01000001.1	GCA_003048755_1_3	GCA_003048755_1_3@C33	4904	4976	tRNA-Val	tRNA-Val	-	777387	.	tRNAscan-SE score: 77.0	Val	NA	tRNAscan-SE	.	C33	39208	493139	532347	GCA_003048755.1|PIRW01000001.1@region_493140_532347@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote	cenote	tRNA	546127	546213	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C45	13267	13353	tRNA-Leu	tRNA-Leu	+	687684	.	tRNAscan-SE score: 69.3	Leu	NA	tRNAscan-SE	.	C45	15189	532861	548050	GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote_tRNA_0003	.	.	.	.	.	.
GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote	cenote	tRNA	540020	540094	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C45	7160	7234	tRNA-Gln	tRNA-Gln	-	687684	.	tRNAscan-SE score: 52.9	Gln	NA	tRNAscan-SE	.	C45	15189	532861	548050	GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote	cenote	tRNA	539922	539993	GCA_003048755.1	PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755.1_PIRW01000002.1	GCA_003048755.1|PIRW01000002.1	GCA_003048755_1_4	GCA_003048755_1_4@C45	7062	7133	tRNA-Met	tRNA-Met	-	687684	.	tRNAscan-SE score: 74.6	Met	NA	tRNAscan-SE	.	C45	15189	532861	548050	GCA_003048755.1|PIRW01000002.1@region_532862_548050@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote	cenote	tRNA	54033	54117	GCA_003048755.1	PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755.1_PIRW01000006.1	GCA_003048755.1|PIRW01000006.1	GCA_003048755_1_8	GCA_003048755_1_8@C1	46662	46746	tRNA-Ser	tRNA-Ser	-	62988	.	tRNAscan-SE score: 64.5	Ser	NA	tRNAscan-SE	.	C1	48052	7372	55424	GCA_003048755.1|PIRW01000006.1@region_7373_55424@tool_cenote_tRNA_0001	.	.	.	.	.	.