core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	37638	42152	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	1	4515	GCA_003048965_1_2_41	GCA_003048965_1_2_41	+	412121	.	PRK09603	DNA-directed RNA polymerase subunit beta/beta'. 	MKLTNLKPVEIKEEHRPRDFEAFQLRLASPEKIKSWSYGEVKKPETINYRTLKPERDGLFCAKIFGPIRDYECLCGKYKKMRYKGIKCEKCGVEVTTSKVRRSRMGHIELVTPVAHIWYVNFLPSRIGALLGIKMKDLERVLYYEAYIVDNAGEAYYDNENSKKVEKYDVLNEEQYQSLASRYEETGFTARMGGEVIYDMLAELDLMEILNQLKEEMESTNSEAKKKTIVKRLKVIESFLNSGNRPEWMMITNLPVLPPDLRPLVSLDGGKFAVSDVNDLYRRVINRNSRLKRLLELDAPEIIIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFSGRSVIVVGPKLKMDQCGLPKKMALELFKPHLLARLEEKGYATTVKQAKKMIEDKTNEVWECLEEVVKDYPVMLNRAPTLHKLSIQAFHPVLVEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSQEAIAECKILMLSSMNILLPASGKAITVPSQDMVLGIYYLSLERNDEKGANKIFSSVDEVMIAEEANTLGLHAKIKTMVDNKIIFTTAGRLILRAILPDFVPENMWNKIMKKKDIANLVDYVYRNGGLEVTADFLDKLKNLGFRYATKAGISISIADIIVPDSKQKYIDEAKKKVREIQKQYGAGLLTDSERYNKIIDIWTDTNNSVASEMMKLIQNDKGGFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIISNFREGLNIMEYFNSTHGARKGLADTALKTANAGYLTRKLIDVAQNVKVTMHDCGTHEGVEITDITESGELIESLEERVLGRVLADDVIDPITNEILFSEGTLLDEEKARAITEAGIKSVSIRTPITCKAPKGVCAKCYGLNLGEGKLVKPGEAVGIISAQSIGEPGTQLTLRTFHIGGTASTEQQDRQVIAQKEGFIRYYNLNTYDNGDKKIVANRRSAAVLLVEPKIKSTIDGKIEIEYAHEDVNIVIKGKKEEVKYTIRRNDLAKPNELAGVSGKIEGKMYIPYVSGDKVKENESIVEIIKEGWNIPNRIPYASELKISDGDPVTRKILADANGVVKFFILKGDYLDRVKDIKKGHKVTEKGFFVVVSDKDGREAVRHYIPRNSIIQVSDNDAVERATVVSLPEKDDKLIIAEWDPYSTPTIAEEAGVVSFEDIEPGYSATEQADEATGQRRLVINEYLPSGVKPAIIIATKKGNLIKYPLDPKTAIFVSSGDEVAQADILAKTPKAVAKSKDITGGLPRVSELFEARRPKNTAIVAEIDGVVRFDKPLRSKERIIIQAEDGTTAEYLIEKSRQIQVRDGEFVHAGEKLTDGLISSHDILRILGEKALHYYLISEIQQVYRRQGVAIADKHIEIIVSQMLRQVKIVDSGNTNFIVGDMVSRNKFKEENERIMNMGGEPAIAEPILLGVTRAAIGSDSVISAASFQETTKVLTEASIAAKFDYLEDLKENVILGRMIPVGTGFYKDKKVKIKEN*	mmseqs_cdd	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0001	persistent	direct	high	4514	1.0	GCA_003048965.1_01099
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	42273	42662	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	4636	5025	GCA_003048965_1_2_42	GCA_003048965_1_2_42	+	412121	.	pfam07681	DoxX. These proteins appear to have some sequence similarity with pfam04173 but their function is unknown.	MKNVDLGLLFIRLGLGICLFMHGFGKILHGLSGVKGILVNAGLPGFLAYFSYLGELLAPIMLIIGFYSRVGAILVLGTSITILYSYYGFANLFALNEVNGFKSELIYLYIAISLCILLIGSGKYAIKQD*	mmseqs_cdd	nonviral_gene	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0002	persistent	direct	high	389	0.997	GCA_003048965.1_01100
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	42809	43207	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	5172	5570	GCA_003048965_1_2_43	GCA_003048965_1_2_43	+	412121	.	TIGR00981	ribosomal protein S12, bacterial/organelle. This model recognizes ribosomal protein S12 of Bacteria, mitochondria, and chloroplasts. The homologous ribosomal proteins of Archaea and Eukarya, termed S23 in Eukarya and S12 or S23 in Archaea, score below the trusted cutoff. [Protein synthesis, Ribosomal proteins: synthesis and modification]	MPTINQLVRKERKKVTVKSKSPALKECPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTSGFEVISYIGGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGALDTAGVAKRTVSRSKYGAKRPKAGAAAATKK*	mmseqs_cdd	nonviral_gene	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0003	persistent	direct	high	398	0.997	GCA_003048965.1_01101
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	43286	43756	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	5649	6119	GCA_003048965_1_2_44	GCA_003048965_1_2_44	+	412121	.	PRK05302	30S ribosomal protein S7; Validated	MRRRKAPVREVLPDPIYGNKIITKFINSLMYDGKKSVATEIMYGAIKAIEKKNAEVKGIDVFNDAIENVKPILEVKSRRVGGATYQVPVEVRPARQQALAIRWLITYARKRSERTMIDKLANELLDAANSKGASFKKKEDTYKMAEANKAFAHYRW*	mmseqs_cdd	nonviral_gene	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0004	persistent	direct	high	470	0.998	GCA_003048965.1_01102
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	43769	45847	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	6132	8210	GCA_003048965_1_2_45	GCA_003048965_1_2_45	+	412121	.	COG0480	Translation elongation factor EF-G, a GTPase [Translation, ribosomal structure and biogenesis]. 	MAERKTPLHKVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVHDGAATMDWMEQEKERGITITSAATTAFWKGYQINLIDTPGHVDFTIEVERSMRVLDGAVSVFCSVGGVQPQSETVWRQANKYHVPRIVFVNKMDRIGANFFRVEEQIRERLKANPIPIQIPIGAEDNFRGVVDLVRMKAYVWNDEKKPTDYVEEEIPAEVKEKAEEYRAKLIEAVSETDDSLMEKFFAGEELSEEEIKKGIKAGCLRMTITPMLCGTAFKNKGIQPLLDAVVDYLPAPDEIEAIKGVYEDGTEVTVESTDNGEFAALAFKIMTDPFVGQLTFIRVYRGSLESGSYAYNTVQDSKERIGRLLKMHSNKREEITELFAGEIGAVVGLKNTLTGDTLASEKDKVILERMDFPEPVISVAVEPKTKADQEKMAIALQKLAQEDPSFRVSTDEESGQTIISGMGELHLEIIVDRMLREFKVDAEVGQPQVAYRETIRKTVEQEYKYAKQSGGRGQYGHVFLRIEPLPAASGFEFVNDIKGGVVPKEYIPAVEKGCKEALQSGVLAGYPVEDVKVTLFDGSYHEVDSSEMAFKLAASMGFKEGARKAGAVILEPMMKVEVETPEEYMGDVIGDLNKRRGQVNSMDDRNGVKIIAAYCPLAQMFGYSTDLRSMTQGRATYSMEFDHYEEVPKNVSDEIIKKRNG*	mmseqs_cdd	nonviral_gene	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0005	persistent	direct	high	2078	1.0	GCA_003048965.1_01103
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	46195	47421	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	8558	9784	GCA_003048965_1_2_46	GCA_003048965_1_2_46	+	412121	.	PDB:1Z19_B	Integrase	MPKTSPQVNDTLLKSLKPKENKYFVSDGENMLIEIRPNGKKSFILEYKSPATNKMARITLGQYPIMSLKEARALKLELKEQISKGIDPKKNNTDKGKRFKDIFHEWFMRKQKQVLAKQQKTIKSFFDRFFLPKFGDMDIKKISRRDIISALEFLEFEKKYITFSKALGAIKELYKYAVLKEYVEHNIILDIDKKALFKAPETKHYAAITDEQALAHLLNNIIYYSGDIRVKACLVLSIMTAVRPLNARSAKWSEFDLDSGLWRIPAEQMKMKRPHVIFLSDDLCKFLQAYRSTFKSEYLFPSVRSLTRPISDNACRCSLRNMGYSNEEITPHGFRATFSTICHEKRAEHKQSSDIIELCLAHIETNKVKDAYNHAKNLKERKELMLWWQGFIYALCPDIYSFIEAKSQ*	common_virus_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0006	cloud	direct	high	1226	0.999	GCA_003048965.1_01105
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	47370	47567	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	9733	9930	GCA_003048965_1_2_47	GCA_003048965_1_2_47	-	412121	.	6AMA_Y	DNA binding domain-containing protein, excisionase	MSEITALSEAVGFIPSKYAREILNISKPTLKKLIDAGIIKANKINQRVIYCDLASIKEYMSGQRA*	hhsuite_tools	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0007	cloud	direct	high	197	0.995	GCA_003048965.1_01106
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	47564	47746	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	9927	10109	GCA_003048965_1_2_48	GCA_003048965_1_2_48	-	412121	.	.	hypothetical protein	MSSLEREKHLAALASLEAFCEAHNKKINLVEQIQALLFKCDVRYLRNALRDLKDYIKERK*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0008	shell	direct	high	182	0.995	GCA_003048965.1_01107
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	47739	48086	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	10102	10449	GCA_003048965_1_2_49	GCA_003048965_1_2_49	-	412121	.	pfam09643	YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	MREIKFRAWNKEKAKMDKNFRFDEFNDVNDYFADDDFVFMQYTGLKDKNDKEIYEGDIVHFKTLRSKEYIGEVKSYEDAASFFVVVKEHYMECLDDVYDLEVLGNIYENKELLNE*	mmseqs_cdd	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0009	cloud	direct	high	347	0.997	GCA_003048965.1_01108
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	48083	48346	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	10446	10709	GCA_003048965_1_2_50	GCA_003048965_1_2_50	-	412121	.	.	hypothetical protein	MKDIYESVLVCIVMAVTCVGAMLVVAFIFLSKLVYYIGLGIFFLYTFFVALPFLILYRFKEFKKDPKGFIKKKVIDTTAHFAEGGII*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0010	cloud	direct	high	263	0.996	GCA_003048965.1_01109
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	48468	48572	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	10831	10935	GCA_003048965_1_2_51	GCA_003048965_1_2_51	-	412121	.	.	hypothetical protein	MTTAEIKDAAIFIMAYSFLKMDSTANLESGLIPK*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0011	cloud	direct	high	104	0.99	GCA_003048965.1_01110
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	48559	48813	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	10922	11176	GCA_003048965_1_2_52	GCA_003048965_1_2_52	-	412121	.	.	hypothetical protein	MTYGEAMVRQQESQRMENGVWVFDELEPYEPFATSTEAYKYYCEKLDRYWLSKIELSPASKFSKQDVLQILKGKNLNGASDDNG*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0012	cloud	direct	high	254	0.996	GCA_003048965.1_01111
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	48823	49296	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	11186	11659	GCA_003048965_1_2_53	GCA_003048965_1_2_53	-	412121	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MFNKIVLVGHLTRDIELRYTTAGAAIGNSAIAVTRKFSVNGEKREETCFIDLTFFGKQAEVSNQYLQKGSKLLVEGRLKFDQWQDSNGQNRSKHSVAVEVMEMLGDAKQNNQGYQQGSYSHSQQGAPKKPQQQKPPADDYEIDIDTDKYDNDETIPF*	common_virus_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0013	cloud	direct	high	473	0.998	GCA_003048965.1_01112
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	49281	49475	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	11644	11838	GCA_003048965_1_2_54	GCA_003048965_1_2_54	-	412121	.	.	hypothetical protein	MKALGILSALFAGLNGAYDFQGAPQAKKSEAHMPHSKTRRTKGTYDRSQRIRANRRKAKRCLTK*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0014	cloud	direct	high	194	0.995	GCA_003048965.1_01113
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	49478	50407	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	11841	12770	GCA_003048965_1_2_55	GCA_003048965_1_2_55	-	412121	.	PFAM:PF03837.13	RecT-protein	MNQLQQTKPQAEQITKSNWLSQDEKKIIKAQFFPPNATDMDMIYCMKVAETFNLNPILKQIYFVERVTNINGQRTSKIEPLAGRDSFLTLAHRSGKFAGIESECGIKQKAVLQDGEWMNKNELVATARVYRTDNERPFCAEVSYGEYVQRTGKGEITKFWREKPETMLKKVAESQALRKAFDISGLYSVDEVGENEDKDDKLPQKLQTPKTQNLNELLSNSEKQNSSVGAKNSQTEYIEAAPLEVEITTVKENLTVEPMPHDLLQSELVKRGASETEAEKLVERLSIDDATAYLNDPSSIDNLIENLRN*	common_virus_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0015	cloud	direct	high	929	0.999	GCA_003048965.1_01114
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	50418	51164	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	12781	13527	GCA_003048965_1_2_56	GCA_003048965_1_2_56	-	412121	.	PFAM:PF03374.13	KilA-protein	MENLIINNQEIKLEVADGQIWTTSLQIADVFEKRHDHIIAKIRELPQDEFTAPNFRVSEYADSTGRKLPMYKMTRDGFSLLVMGFTGERAYQWKVKFIKAFNLMEQKLKNPFNVPRNYKEALELAITQIDKIEALEAQRLADMPKLIFAEAVEASATSALIGDFVKTLCDENDVSVGRNRIFKWLRDEKYLMADNMPYQRWLDAGYFEVIPQIIVTPKGNKERFTTRITAKGQVALSVKIINAFKIAA*	common_virus_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0016	cloud	direct	high	746	0.999	GCA_003048965.1_01115
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	51164	51364	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	13527	13727	GCA_003048965_1_2_57	GCA_003048965_1_2_57	-	412121	.	.	hypothetical protein	MQQTKQKFVQYLALYQIEPTDDNEEVSYKVLDCAYDLFCALEALAKNHNAMRTKILNILQPKEKDK*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0017	cloud	direct	high	200	0.995	GCA_003048965.1_01116
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	51513	51806	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	13876	14169	GCA_003048965_1_2_58	GCA_003048965_1_2_58	+	412121	.	.	hypothetical protein	MSDKKEVKLDIDLLRQSKKERGNAETEAVQEQSQNKTEIISIRLDPLTKEKLAYICDLEYRPVALQIRKIIEDFIRRYEKENGLEHDIKYPGNEIVF*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0018	cloud	direct	high	293	0.997	GCA_003048965.1_01117
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	51775	51942	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	14138	14305	GCA_003048965_1_2_59	GCA_003048965_1_2_59	-	412121	.	PFAM:PF05534.11	Arc-like-repressor	MKDKQANIVSIRLDDETLQKLKDDAQKEYRPLAMHIRKILMDYLKSKKQSRCPDI*	phrogs_hmm	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0019	cloud	direct	high	167	0.994	GCA_003048965.1_01118
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	51914	52156	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	14277	14519	GCA_003048965_1_2_60	GCA_003048965_1_2_60	-	412121	.	.	hypothetical protein	MKVKASFRGIEIETDVEPVNDGYFNLNFDGAYLMEIFYDGKDFSPTGRIMDGWGKSGVPFENSEVKIERIDDERQASQYR*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0020	cloud	direct	high	242	0.996	GCA_003048965.1_01119
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	52175	53041	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	14538	15404	GCA_003048965_1_2_61	GCA_003048965_1_2_61	-	412121	.	PDB:3H4R_A	Exonuclease	MLEIDLSELKGFKFPLNTMIKGLPNKDYHEAGGLSSTRFDLIRKSVRAFKFRHEFDLWKPCFDEGTLCHDCILTPENIKETYIESPTAGLDTKKAEALREANPDKIVVGKGMLEQYQKLAVFVNRFVPFLKYADKEVSFFHYHKDADLLMQARPDIYIRKMGLLYDLKSTKANNKDEFEKLIEPYNYDLSLAYYTDVLNLCGYKTSLKYTGWLCVPKSAPHIPFLVRASEELLEKGRSKYQELLTQYMDYIAAEKEYGEEDMELIYSDIAKDEAHSYEYRKENYITAA*	common_virus_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0021	cloud	direct	high	866	0.999	GCA_003048965.1_01120
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	53034	53960	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	15397	16323	GCA_003048965_1_2_62	GCA_003048965_1_2_62	-	412121	.	PF07083.11	Protein of unknown function (DUF1351)	MELIVTYEAQTADSQKLTTNFEELKAEASRQVEKYSINVTEENIPEAKKVMANFNKVKTEIGERYKFYIDKISAPVNQLKAEKKEIEAIITDGRQKIADGVANFENAKLEAIAARIAEYTKTLCDEKGLNFERINTSDLIKLSAVTPAGTLAKATKDAIENKIQALENEILQAKIAEQEKAARDAEIAVQARREAEERAAREKAELEAKAAQREAELLARAEREKQEAIERAKAEQAKPIPQAFYDAQREILQKPREAENGKAIYTIRAEFEVKAPANAPHDKLTDKIKEMLAAAGITNLSKIEVLNA*	hhsuite_tools	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0022	cloud	direct	high	926	0.999	GCA_003048965.1_01121
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	54026	54658	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	16389	17021	GCA_003048965_1_2_63	GCA_003048965_1_2_63	-	412121	.	PF12083.8	Domain of unknown function (DUF3560)	MATFKKYCPNVWVAECDEKHNKGEIITLETQYGKEVDCEVYNLVAEKNNKFYYSIVRLEELSYAERKADKYRNSQALHEAKSHEWHEKSQEGAEFLRLAEPIKVGHHSEKRHRALIDRNWRRIGNAVKEEDIADKKAARAQYWEEKAQEINLSMPQSLEYFSKQLEKAKARQKGLKDGTIQREHDYSLAYATKAVKDLTAKLELAHKLWA*	hhsuite_tools	nonviral_gene	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0023	cloud	direct	high	632	0.998	GCA_003048965.1_01122
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	54722	55069	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	17085	17432	GCA_003048965_1_2_64	GCA_003048965_1_2_64	-	412121	.	.	hypothetical protein	MSLSHDLARAESDVARINLNQEFDPLISDIEAVYSRHRYTFKNALGEDSGEIVDLLIEHCSKDFFAYAALVYVLCDEAKMSNEAVLSYTTTYKQTLKKLREEAERDAILHTKEAC*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0024	cloud	direct	high	347	0.997	GCA_003048965.1_01124
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	55616	56317	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	17979	18680	GCA_003048965_1_2_65	GCA_003048965_1_2_65	+	412121	.	.	hypothetical protein	MSVRISKSIMGIRFSTNLLSDTSPKERRPTQAELAAEDKEQFLKKISDICNNSWLPFLEECGYTKQTIFYAFNNGIELFDFVADEENQTIFSSLFDQKQELETLLNKVKFSNVLTAKRREEMTDIVFKIYDLINTAKRIYSDESVLKIIAERKNKPYDVVLKEKNKYKITRKKMSFFKKFLYWFFIITFLGAAVTGIGEVSKKETLNGTEFFSLLIPICIAWFLYIRYKKAKA*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0025	cloud	direct	high	701	0.999	GCA_003048965.1_01126
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	56321	56764	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	18684	19127	GCA_003048965_1_2_66	GCA_003048965_1_2_66	-	412121	.	COG1525	Endonuclease YncB, thermonuclease family [Replication, recombination and repair]. 	MILRTIFITILLYCPLFAFSAKVIKISDGDTITVLNDKEQTKVRLYGIDAPEKKQDYGQRSKQFLASLIAGQVVEVEPKGKDRYKRTLGIIYHKGQDINAQMVLNGYAWAYVKYSRMYADQEKLARENKRGLWQSSDPTPPWEWRKR*	mmseqs_cdd	nonviral_gene	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0026	cloud	direct	high	443	0.998	GCA_003048965.1_01127
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	56764	57789	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	19127	20152	GCA_003048965_1_2_67	GCA_003048965_1_2_67	-	412121	.	.	hypothetical protein	MGQIGNDIININSVEDLFFYFDSFKKGEITNDNLCIGIDNFIKNFSIILRYNDNLGRLNATVDSQLAQAIIDFQEFIYKTYKVLKYQDSPRELSDDEKASLKIYVKILRGSTIEEIVNLGGIIDKMVEGMDGEQKLIAFFILVSVTTVGFLGKKIIEYYAKKSDNKKEVDLSCQETEREEKIINGFTQVVRYVSDRPLYSEVIKDGQKALLKPVKNNNSYTLGVRDNLSDENTLFQEEAIVDSNKAKKILRGTRSSSETEIVTDYYYVKYIEALDDGGYKMKLKSSSSDAYGIVEFGLDDENIDYDAIFGSMASREPIKLTVKTKTINNTVSIEKLIATTN*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0027	cloud	direct	high	1025	0.999	GCA_003048965.1_01128
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	57887	58558	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	20250	20921	GCA_003048965_1_2_68	GCA_003048965_1_2_68	-	412121	.	PDB:2FJR_A	Repressor-protein-CI	MKEFKDKLSDLLKEKGINTIQFADILGISQPLVSQWLAGEKRTKKHLLPLAKFSGYPIAYWLDDTIEKPTEAHKYTDNISSNSTKTVYIPFYKDGVVSAGRGAENDDFGEPELLPFNPNDLKIMFNVSPHAKLGIVPCFGNSMEPTIKESDLVVFCDDINQIEGAIYVCKYENEIFIKRIKKRPTLALISDNKDYEPIIIEEELNVEILGRVVGCYAINSKRI*	common_virus_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0028	cloud	direct	high	671	0.999	GCA_003048965.1_01129
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	58668	58901	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	21031	21264	GCA_003048965_1_2_69	GCA_003048965_1_2_69	+	412121	.	.	hypothetical protein	MKQTEYRKKIRKWLGKFYKSAGTCNTYACGSNNKKPNGDVRYAALQELGHPFYAWGDKLNAYILEAEKQEKNKNGSE*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0029	cloud	direct	high	233	0.996	GCA_003048965.1_01130
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	58888	59157	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	21251	21520	GCA_003048965_1_2_70	GCA_003048965_1_2_70	+	412121	.	7BZH_A	Sul7s	MVASNSLEAYNKLKPELSGKRRAVYEMFCQHKEGATRQEIARWYNVAINSVCGRVNELVERGYLIEIGSKKDAISGCSTSILKPAERIA*	hhsuite_tools	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0030	cloud	direct	high	269	0.996	GCA_003048965.1_01131
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	59248	60060	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	21611	22423	GCA_003048965_1_2_71	GCA_003048965_1_2_71	+	412121	.	PFAM:PF04936.11	HNH-endonuclease	MNLSDFSKEQILRERSRLSDMKRRCNDPKNKDYKFYGARGIKICDEWMKNPTSFYLFALKENKGQEGLTIDRIDPDGDYEPSNVRFVSRHKNCVENFVGKQGKDTPNFRIYAKHGGLYENQYEKKHFKYVCRHFCNQRRKGGWSLYESLNVPVGQRREIFWYNIEKRKTEFFNEIFLNLKDQLAIYPELGSPRACPKCKEESMFLKMDYPVRMECACGYRLDLQTVKAKFSARHAPRVSKVKINAILKKSKYEPRTEYISSLGAQSGIEI*	phrogs_hmm	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0031	cloud	direct	high	812	0.999	GCA_003048965.1_01133
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	60073	60912	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	22436	23275	GCA_003048965_1_2_72	GCA_003048965_1_2_72	+	412121	.	PFAM:PF09681.9	replisome-organiser	MSKTYYWLKLKKDFFDDPKILKIRSVAGGDTYTCIYLKLLLKSLDNDGVIFFDGIEPTIEAEIALKIREQEINVKAAMAIFESLGLLQKGEGEDVRLPEAASLSGKECDSAKRVREFRAKQKEVKALHCNSAVTSGNENVTLEKELELEKELEKEEANASTYVRACEGEKKPAKRFQKPTLDELTAYKQKANLALTDCEAFYDFYESKGWVIGKNPMKDWQAAMRNWERTERERGGKCKNTPTNTSLATRETMVAGEMDDAYFERVANEIISGERKMAL*	rep_hall_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0032	cloud	direct	high	839	0.999	GCA_003048965.1_01134
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	60909	61547	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	23272	23910	GCA_003048965_1_2_73	GCA_003048965_1_2_73	+	412121	.	.	hypothetical protein	MSEREQIICELFGDSRGFLTPSRLAKYSLLLKNVATSELIKFSVFAEKYRKEYQNTDALLFRATMEWSKIVFLKMREKGLRFFNDVDTLAAFCKEIYRGTRLCNGGTGSGFLESTIISVDTNGVLRNECVLENGVFQRLTSDEETHLFEYLLEHQEKIGVVQIKTRESEVKQAQLAANNVNLLPADPDAPLKMSDETRQKFLEIRKNIAKRA*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0033	cloud	direct	high	638	0.998	GCA_003048965.1_01135
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	61549	61731	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	23912	24094	GCA_003048965_1_2_74	GCA_003048965_1_2_74	+	412121	.	.	hypothetical protein	MKAVYITITESGASIIAKVADENKKILDNFEISRKDASGVLEVMRKWNEKHKGDDTRGLF*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0034	cloud	direct	high	182	0.995	GCA_003048965.1_01136
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	61728	62651	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	24091	25014	GCA_003048965_1_2_75	GCA_003048965_1_2_75	+	412121	.	pfam02384	N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.	MTNEYSVKAIREHFKANGIFYTPPELSKMLKEIVEKEVSDIKEVYDPTCGRGALLSAFDDDVAKYGQDINAPEIEVAKNSLVNFNGAIGDTLKNPAFLGKKFKAIVANPPFSIPWDSDSVFFDERFAGYALAPKSKADYAFNLHILHYLSDDGCAAVINFPGVLYRGNSEGKIRKALVENNLINEVILIPGGYFDDTSVATCVIVYKKNKQDTNIIFTDKELNLSKSVSVEEVAKNDFNLSVSQYVFVEKVKPPFDAVATELQARADFIANMKKELGFSKLVCDFEGINFEEFPKQIIQTAQSYIGD*	mmseqs_cdd	nonviral_gene	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0035	cloud	direct	high	923	0.999	GCA_003048965.1_01137
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	62653	63321	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	25016	25684	GCA_003048965_1_2_76	GCA_003048965_1_2_76	+	412121	.	PDB:1G60_B	Adenine-specific-DNA-methyltransferase	MEINKIYNTDCLDFMKNMPDACVDLVVTDPPYIINTKGGGLGKRPVYEKGDLAKIADGFDVKTTLNELERICKKTNIFIFCSTKQKPEIMSWAYEKGHNVAELFWHKPNAAPFTNNTFKSDIENIIYIRAKGIKIRGRSKLFTQNAKKSEYGHPSEKPLSIIKSLILTSSSDGELVFDPFMGSGTTAAACKELNRNFIGCEIEAKYYEVAEKRLKETIRGLI*	common_virus_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0036	cloud	direct	high	668	0.999	GCA_003048965.1_01138
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	63318	63620	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	25681	25983	GCA_003048965_1_2_77	GCA_003048965_1_2_77	+	412121	.	.	hypothetical protein	MSEILNYVVYKLELDEIEGSDDWFDANGRLKYKERFLFDTLKEAGEIEKSWLVALFACEQDAIEFCEGAGLSPNSDYFYFCTRSHYSLDAEIGEYVEVGY*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0037	cloud	direct	high	302	0.997	GCA_003048965.1_01139
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	63620	63880	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	25983	26243	GCA_003048965_1_2_78	GCA_003048965_1_2_78	+	412121	.	KOG4768	KOG4768, Mitochondrial mRNA maturase [RNA processing and modification]	MRLTRSENRAYQLRLLEAYPLCQICEEQQSIECHHVRYGSFGADKDDSKQIAVCRECHQWCHAHKKESIEKYEGVADENWQRFGDC*	mmseqs_cdd	nonviral_gene	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0038	cloud	direct	high	260	0.996	GCA_003048965.1_01140
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	63849	64229	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	26212	26592	GCA_003048965_1_2_79	GCA_003048965_1_2_79	+	412121	.	PFAM:PF06356.10	Endonuclease	MRTGNVSAIVKSKYRNRRTNGFDSAKEWRRNQELEALQRAGEISELNRQVPFTLMPSYTISDETTKQGFRTIREIRYIADFTYRLKNGKRIIEDVKGMQTDVFKIKRKLLERKIALGVIEGEFRIY*	common_virus_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0039	cloud	direct	high	380	0.997	GCA_003048965.1_01141
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	64234	64593	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	26597	26956	GCA_003048965_1_2_80	GCA_003048965_1_2_80	+	412121	.	.	hypothetical protein	MDLPNLKHLDVFYAVLDKFYPDWEKREDHYYLTEISFLIREVLNSPYTDETVINNLRVSEVKKYQVELNTLLNTPKEFLDWVLKHRMTASRRKMCQSKYLSTKPKRKYKKKKYQQLTLF*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0040	cloud	direct	high	359	0.997	GCA_003048965.1_01142
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	64600	65184	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	26963	27547	GCA_003048965_1_2_81	GCA_003048965_1_2_81	+	412121	.	PFAM:PF10078.8	transcriptional-repressor	MVGKITDEIKEKILADFHTGKFSQRELAKKHSVSNGTVANLLKGLTPKNEHLVEAQITLLSAQTQKSEIEMSSILSTAKDEAYNRGLIFNATQKNLNRVMDMLDKNTKFEKVGVGDGVQNFEPVELNANDYKALQEAIDKASLTLGVNSRTGNISINNTNAQQNVQQNVKNELDLTNLSDDELETLDAILSKAN*	phrogs_hmm	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0041	cloud	direct	high	584	0.998	GCA_003048965.1_01143
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	65138	66598	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	27501	28961	GCA_003048965_1_2_82	GCA_003048965_1_2_82	+	412121	.	PDB:8DGC_F	Large-Terminase	MMNSKHLTQYSQKQIKNELARRSLIRFVTEINPSYQVGWFNKEIANKLERFYLNVMEGKQPRLMIFAPPRSGKSELFSRAFPAWAFGKNPNLQIIASSYSSDLSTRMNRDVQRIMMSEPYAEIFPETKLNSKRVVTATQNALRNSEIFEIVGHAGAYRSAGVGGGITGMGADISIIDDPIKDAAEANSATFRDRVWDWYVTTLYTRLSPKSGILLGMTRWHEDDLAGRLIQEAQKDGDKWEILSFPAIAEHDEEHRKEGEALHPERYDLNRLLKIKSALGSYAWNALYQQHPSTKGGDIIQGAWFGRYDVAPRIKRVGVFMDTAQKTGEQNDYSVLLLAGLGYDNAIYLLDLKRGKWDVVELENTTKDFFAKHRSTYNGLMFYIEDKSSGTGLIQKIKRENNIPVRAVTPQKDKYTRVLDVVGYIESGYVNLPTNGAWVSDFVDECEKFTADNSHLHDDQVDTLTMAISEFKNKPSGIWGHITSRS*	hallmark_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0042	cloud	direct	high	1457	0.997	GCA_003048965.1_01144
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	66644	67879	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	29007	30242	GCA_003048965_1_2_83	GCA_003048965_1_2_83	+	412121	.	PDB:8HDS_J	Portal-Protein	MGQKITDSLENLVTKMGQMTANRDYTPLLVTNTQLLNAYNNGWIAKRYIKKTIGDMLKMGREIDWDDIDEERKKEYYDACNKLEIDGVIKDLLFNVLLYGEAAILAVTDANEEAYQLPLMPNEAIKQFIVFGKGEFKARNAEHKFNRPSLYDVKGVKTHISRLCIVQGGIKSYGVEQRESISDIATALDVIKMFDTITLSVSDLIEECKIDIYKMHGYNEQIATGNEDEILKRLKLINSAKSYTNAIAMDMEDDYLTKENNLTGIAELWSKSCIVVAGALNRPISILFGEGAGGFSSGEEDNRAYYETINELQNTLLRPVYDFIDPFILGETLEYDFYSIDSLNDKEKAEILNVKSTALGNLLDKGVITEAIILKELKDEGLIKNISADDITEAELLAQKLDEPADETDLI*	hallmark_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0043	cloud	direct	high	1235	0.999	GCA_003048965.1_01145
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	67860	68684	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	30223	31047	GCA_003048965_1_2_84	GCA_003048965_1_2_84	+	412121	.	PFAM:PF04233.13	Minor-capsid-component	MKPTLSELFSKKRNKEFKPVQPSKRAEVKYRNALLLLIASLKTALLKRLRAFLLGSPSDAEIIEHTTQILDGLRKADTLDYAKKISRGVVSAVNETNKERLIQNIQKGTDIDLTPLVGDTAVKTKLDEYVAKNVSLITSVKNDYLNDVEKAIRESYLKNGRAENLATIIHERTGVSKSRARLIARDQTAKINAELDQERMQNLGVKLYIWQTAKDERVRHTHANMQGVLCRFDDDSVYSKDGGKTWIKREADKPKCKPGVDIQCRCFAKAIIGV*	hallmark_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0044	cloud	direct	high	824	0.999	GCA_003048965.1_01146
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	68685	69803	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	31048	32166	GCA_003048965_1_2_85	GCA_003048965_1_2_85	+	412121	.	PFAM:PF09979.8	head-maturation-protease	MDFKINDDGYIITKAKMASIQPMEYLGEEIGRTSGKVYKVFRDEKEVFSPETIKSFEGKPLTLTHPDDDVTAKNWKDTAIGHIQNVRREGDFLVGDAYINDEIAIKIIKEQGIKEVSCGYDSKLIERDGKIWQTNIRGNHLAVVAEGRAGKDCKLGDSKRIKMKFIDKLKGALTAAKKFKDNDEVGKEKVEEANEANNELVELLEQALSGAEEVSTKLDETTAELEKTKTELADVKAKSVKDDDGTDENAEIAELKAKVEALEKENAELKAEIEKLKGEAATTEAVTDAKANFSHVKLSDAKNARGVYEAVILDSKAFEASELKKLSDSEIKAIYMGMRVNAKNKDNSGSVLDKFYDAKPNKIDLNKKFGGK*	phrogs_hmm	nonviral_gene	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0045	cloud	direct	high	1118	0.999	GCA_003048965.1_01147
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	69803	70246	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	32166	32609	GCA_003048965_1_2_86	GCA_003048965_1_2_86	+	412121	.	PFAM:PF11133.7	virion-structural-protein	MGYLDKRAFAGQVARVGESPVITKAVVNKDTDDIGFGVFVCVKDNGAAKLTASDDNILGVTLKVGVKIANKPGEVLSVMSLPHGAEIWVQGKEDHDLAVGDTIQVEATAGADAGKVAKTATLAATAAKDKFYVTDVAGDLVKLMRKE*	phrogs_hmm	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0046	cloud	direct	high	443	0.998	GCA_003048965.1_01148
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	70248	71198	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	32611	33561	GCA_003048965_1_2_87	GCA_003048965_1_2_87	+	412121	.	PDB:5WK1_D	Major-Capsid-protein	MKIRDEEILSQLATAAATFNEGFKEREYPEVQLAKFMSITSKGGENADEIEYGETDGTQDLDNGLIDENTTSLETEDVYINAKKAPCLVWAKGAIYTTEAVARAARLDINLDDAKLRNLERVALLTMQKTALIGHPKVKRVTGLLTNGSVKKQDFTGGSNKALSAMTGVEARDFFLKLIDLGYERNGGLVVPDTIAVDSRDLMGLAGKYDDTIGGGKIAVNVLANIKESIKESAGVDVDIVGIPLGFARDLAGKGKNRVAVYTNAEDVVSVDWAIHPQAFPPFQRSVLSWEIAIKAKFTGCLIRSLDKIFYADYKA*	hallmark_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0047	cloud	direct	high	950	0.999	GCA_003048965.1_01149
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	71201	71572	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	33564	33935	GCA_003048965_1_2_88	GCA_003048965_1_2_88	+	412121	.	PFAM:PF13262.5	head-to-tail-adaptor	MTAADFLNKFPEFKAVDEARIELSLDEAKLQVTEKIWGRFYEVGVLHLAAHILAMQGALSTEASASPQPLREIGSKAVGSLSVSYTSGKTGFESESGSYYLTKYGQRYLELKKLVTPHFGLVR*	hallmark_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0048	cloud	direct	high	371	0.997	GCA_003048965.1_01150
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	71569	71997	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	33932	34360	GCA_003048965_1_2_89	GCA_003048965_1_2_89	+	412121	.	PFAM:PF05069.12	Virion-morphogenesis-family	MIEKLDGKIAEIAGLSIVVGVTAKSNARSDELTNADLAMIHEFGSPAHNIPERSFLRKPLINNAEAVANFAKTAIGKFIVGEISLEAALGYVGEEAKGISKEAITDGISPALKPTTIKRKKSSKPLIDTGQLLNSITYEVRK*	hallmark_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0049	cloud	direct	high	428	0.998	GCA_003048965.1_01151
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	71994	72311	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	34357	34674	GCA_003048965_1_2_90	GCA_003048965_1_2_90	+	412121	.	PFAM:PF10665.8	head-closure-knob	MINVSELIEDSDFCQVIKRGDDEFKAVVQFLSNDEMQRLPEGERYKEAVRIDTKFNLNLQDVITYKGINYRIINMQDWSEYGYKNFTGVRFDGLESFDSQGFERR*	hallmark_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0050	cloud	direct	high	317	0.997	GCA_003048965.1_01152
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	72265	72741	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	34628	35104	GCA_003048965_1_2_91	GCA_003048965_1_2_91	+	412121	.	7KJK_C5	Myoviridae, Phage, 6-fold neck region	MTGLKVLIAKALNVDKSLVRDSYSKTLNDKTAYLTLHLLTSTQKGREYKFIEGEKEVITSTREAVVSVNAFGKNANFIIEKLNTLFYSSECLKELKILGLGLVTISPIRNLSQIVGGGVEERASIDLTLSYINRVEVSQNEIKKAEIKTADFGIKVNR*	hhsuite_tools	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0051	cloud	direct	high	476	0.998	GCA_003048965.1_01153
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	72738	74243	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	35101	36606	GCA_003048965_1_2_92	GCA_003048965_1_2_92	+	412121	.	PDB:5LI4_E	tail-sheath	MSLTIKRIVNIQLNEQGQIAKNRDFSVIAIISDDWCEAFDDVNTRFVSIASANDAALNFGSESRATKAAKAIFSVSGVKKAIVAKWVKENKTTQASANELRGSALNVGINKLKAITSGSFKLNVGGTDKVYTNLDFSSCVDFEAVATKLTTAISKDGIKAVYDAEGNRFIIRAATAGKNDNTRLGYFEKADSGDFVGVLLNLVSGKSDIYVGKDSVTQKKESLSEALDKLFNATQGFYGVYSSAILADEEVAELNEWITSAQNPSVAGYTITRKAQLESVNTNVIKKIADKDSGRFFATYNNTGDEHAGAELLAKALSTNWEGSNTAQTMKFKNLKTAGTDETITLNLAEKCDKLGVNYYTDYDGVSMIAEGVALGGKFIDETVGLDAFNNRTQIAVFNVLKGAKKVPQTDKGQVRLIAAVKQVCEQFVKNGFIAAGQWRGDPVGTLESGDYLDLGYYVFSPSYTEQLQADREARKSVPINVAIKLAGAIHSVDILINYNR*	hallmark_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0052	cloud	direct	high	1505	0.999	GCA_003048965.1_01154
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	74253	74687	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	36616	37050	GCA_003048965_1_2_93	GCA_003048965_1_2_93	+	412121	.	PFAM:PF11681.7	virion-structural-protein	MARYQHDTIVLLINGYEITAYADGSDVISIENAADAGAYTIGASGRGVFTGSCNQSGTLTLKLLQHSEDCKFLQDLYNQQRTEFKSFSPMTMEFKDTLNGDELSGLNGFFVNDGGLKRGDAHNPTEFKIAFERISKRLENGAGN*	phrogs_hmm	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0053	cloud	direct	high	434	0.998	GCA_003048965.1_01155
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	74687	75091	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	37050	37454	GCA_003048965_1_2_94	GCA_003048965_1_2_94	+	412121	.	pfam10876	Phage tail assemb.y chaperone protein, TAC. This is a family of putative phage tail assembly chaperone proteins largely from Haemophilus and Xylella species.	MQTYELMINENKYVLRSANFFETKTQLQSLLGLAKDAIKMQGEDVNIDVGQIIANIGSAAFSGVENFILKYTSVINAEGGEILLRNMSQAETHFNANRGDYAQLILEGLKYHFLDFLPAGTKSLTGITAYLNKV*	mmseqs_cdd	nonviral_gene	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0054	cloud	direct	high	404	0.998	GCA_003048965.1_01156
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	75314	76954	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	37677	39317	GCA_003048965_1_2_95	GCA_003048965_1_2_95	+	412121	.	Uniprot:A0A088C3U4_9CAUD	tail-tape-measure-protein-	MPLKGYIVLLDEFLYKIGFDVDSGKIKQIEQGLKNISSLAKQTAQPISDAVKAGMERNAELIAKLEQAKNQGIEWCEEAKGQAEELAAGFHEVAEAEKKVGEKAKEAAKETKKLTEKKPAVGLKQEFDGIRNKFMLIGAAAAAASGLIANYLTVPLQNIQELAKQKNKLFNITQAEIDQAKEYQGRLQESKTAMQSITTQVALKLIPVVNQSLKGFNNFLKANKALVVEGLTNVFKWILKLGQVFTNTFRFLNKVISSTIGWKAALLILVGILAVVKRAMLAAFLTNPIGWVILAIGALMLLIDDLMTYLDGGESLLGDYWKPFIEWSKKAITWFKSVKPTIEQVLNNILTIFRGIFNAIVGYFKIFIGIFTADFDLIEQGWDELWDGVKTTFKAWVETIEMIVAAFIDVIQNFFSIAWKFISAGFENLGKVIMKPFELAFKWIKDQYNKYIAPIVDTVKNFDIGQTAKDMWEETKNLFGFSNDAAKTAALPTQYADNNRTSTYNGGDITNTYNITTQNPEMVERIMQKQNQLNLAAAYHNVGGGY*	hallmark_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0055	cloud	direct	moderate	1619	0.987	GCA_003048965.1_01157
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	76954	77649	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	39317	40012	GCA_003048965_1_2_96	GCA_003048965_1_2_96	+	412121	.	PFAM:PF06995.10	tail-fiber-protein	MIEVTSRKIGTFRLDATEQENNKSTLRTTKNPIESGANVADHAVLEPKQITIKGKIVAYEPPTLTRGDEIMQVVRFNLPYIKTAHRFTQKAYKLYNNVKHIKNEAMRYARIFGVDKKIREIAPFLTDGKENKDNSTAKNRLQSLYEKLLEVQKSGEFLIVTTGLKTYRNMLITSIEVTTESDLYADVTLTLEEIFIVETKTAKGLNVGKRGVNLGKTEPKLKKSSLLKDIF*	phrogs_hmm	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0056	cloud	direct	high	695	0.999	GCA_003048965.1_01158
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	77646	77996	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	40009	40359	GCA_003048965_1_2_97	GCA_003048965_1_2_97	+	412121	.	7KH1_B4	Myoviridae, Phage, Baseplate complex, VIRUS	MIYEIPTKNELKQTQNFNIFDMELELTLKYNEVGAVWQFDLTDLNTNKILAFNKGLAVNAPSLINKNLPFVLMLVDTTKSGVNCVDFSELGGRLKLYAVDKKEFNAVMSEIAKDRT*	hhsuite_tools	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0057	cloud	direct	high	350	0.997	GCA_003048965.1_01159
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	77993	78823	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	40356	41186	GCA_003048965_1_2_98	GCA_003048965_1_2_98	+	412121	.	PDB:1WRU_A	Tail-protein	MRQYGRRYRLEIGNNKQSIVIDNLAISFNIEKTISEEPNTSKIEIYNLNANNRNQIANKIFNQVKLFAGYDEPRLIFAGQITQAYTSRNDLDFITHIECGDGQNDYSKSRLYTTLKAGVKDSDVVNMCVKAMSSSKQGVVDLPKDKALPRCKVLSGDIKDYLKHVAKNNDANWHILDGNLNILPKDKVINDSEGFVLSEKTGLINSPEKTDDGLRVTCLLNPKLNIGSLVRIQSILSEYDGDYKITQLTHSGDFLNDTWQTELIAINGKFHKVEKK*	hallmark_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0058	cloud	direct	high	830	0.999	GCA_003048965.1_01160
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	78820	79488	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	41183	41851	GCA_003048965_1_2_99	GCA_003048965_1_2_99	+	412121	.	PDB:4RU3_A	phage-baseplate	MNDPNLTQIFDSGLLSFEAGVHTALPAKVLKFNAGDNTVQVELMINELKRDGVSVPLPPIDDVPVQFFRGGDFVITTPIRKGDHGLCVFAERCIDGWFASASKGEPLDFRLHDYSDGFFLTGFSPRPEAVKDVDLDGVCMRTLSKSTYLKLTEGKIIIKGNIEQTGDYKQVGNKNLVGNFSQVEGNSISSGTITAKDMIGSGVSLKYHTHGGDSGGTTTQPN*	common_virus_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0059	cloud	direct	high	668	0.999	GCA_003048965.1_01161
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	79499	79837	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	41862	42200	GCA_003048965_1_2_100	GCA_003048965_1_2_100	+	412121	.	PFAM:PF10934.7	baseplate-wedge-subunit	MRVRAIDSEGDWLLGHKADSAAIAQNVKTQILSLYNDWFLDFENGVRWFNYLSKNPNTDKMRDEIKRQILSVEGVSSLEILNINTNERKATIEVQYRDIYDESQRLYINASE*	phrogs_hmm	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0060	cloud	direct	high	338	0.997	GCA_003048965.1_01162
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	79824	80945	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	42187	43308	GCA_003048965_1_2_101	GCA_003048965_1_2_101	+	412121	.	PFAM:PF04865.13	Baseplate-J-like-protein	MRVSENRIIIDELETIKERLENGFKAIYGENLELGSSTPDGQMIGLFSEALSEVNQVLTFITQMLDPYLATGEWLDQRVAYAGLLRKTADYSRASGVTIHGASGTIIKKGTILKDKNSNLWVTDYEVTLGAEGSKAVSITSQETGAFTLNEQDELEMQEIILGIDRIVATQNSTLGADEESDGDLLLRFMQSHSINNNDDRQGLESYLLNLKGVKQCKVLENYTNQTDANGVEPHSLNAIVLGGDDTAIGEAILKKKIGGCGVQGQTKLEVEFLGAKREVKFDRPTQINPRIFLRIKRTEGVTDINTDKIKELLSSHVFNIGEDVYISRLYSIINDVKGFEVTQFTINGGQSLPVAVREICVINKNDIDLAVV*	hallmark_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0061	cloud	direct	high	1121	0.999	GCA_003048965.1_01163
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	80945	81583	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	43308	43946	GCA_003048965_1_2_102	GCA_003048965_1_2_102	+	412121	.	pfam11041	Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	MVELIWQYRKKPRARATAKLLNDEVYKAFDDAIKVAEILNIDTVSGYALDLVGRHVGVSREQQNLILKDFFAFTQAEKEQGFNKGEFYRLGNSLKGSFYLNDSDYRFLIKAKIIKNYQTGTLENSYKSLEFLLGAGNFIFDNYDMTLNLVLKNAKTTQFLINLIFKNDILARPVGVGLNVILIADKKCFGFKQNKANLAFGVGKFARIYKEQ*	mmseqs_cdd	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0062	cloud	direct	high	638	0.998	GCA_003048965.1_01164
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	81583	82425	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	43946	44788	GCA_003048965_1_2_103	GCA_003048965_1_2_103	+	412121	.	PDB:2FKK_A	Baseplate-protein-	MIYEKPKNEIFASDAKDGEIVDFPNIKRGWGVTENLGFIPPMEYFNAVFNRVDKSLAYQLQRGVGEWDKDLEYPIGAVVSLNGVVYVAKSQNTNKTPTNEATIWDIVATQKWSENQFLKKTDKNDAYTKKESDDKFVAKTDKATETKAGITKLKNSINAKAEDTAVTEKAVRDFVAASQSGLGIGQTWQDVKNNRKLGINYTNDTAKPIFIIVGRKGDGSPYPMKVFVSGVLVYEGRTNHNAIGVNKVASVIVPVGATYKVEMDGVDSQTDEQFQWVELR*	hallmark_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0063	cloud	direct	high	842	0.999	GCA_003048965.1_01165
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	82436	82735	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	44799	45098	GCA_003048965_1_2_104	GCA_003048965_1_2_104	+	412121	.	.	hypothetical protein	MKYHKNKSNEIYAYEDDISEELLNQRIKELGLTPISDDEANKLLEPKIDEKAKALAQLEADIKECEDDIKHALIIGNTAVLESLRNEYKELIIQREGLK*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0064	cloud	direct	high	299	0.997	GCA_003048965.1_01166
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	82732	82998	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	45095	45361	GCA_003048965_1_2_105	GCA_003048965_1_2_105	+	412121	.	.	hypothetical protein	MSYFLICVLSLIVGILLCPIVIFLRARKCEGWDSSNMANIIRVFAHLATHPDDFSRFQYEDGKKPFWYLDKDEFTDVVQTRPTQKDRK*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0065	shell	direct	high	266	0.996	GCA_003048965.1_01167
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	82995	83135	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	45358	45498	GCA_003048965_1_2_106	GCA_003048965_1_2_106	+	412121	.	.	hypothetical protein	MRVKVKRCEICASKLSKDGNCTWSECPKCPNYKAKEQEKPKDKKDE*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0066	cloud	direct	high	140	0.993	GCA_003048965.1_01168
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	83135	83779	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	45498	46142	GCA_003048965_1_2_107	GCA_003048965_1_2_107	+	412121	.	PDB:5O6V_E	Envelope-protein	MLKFKEFLQLLAIIIVELPLELASWVVVPIALLFCNKQSERLPKWARYFEDASDLYDGENSAINGDSGWRKEHFKEPKNRTYFARLLWLYRNRIGYFSSRINGVKVSEIDPSSVRVQGNIKVTSNGGVISDFCKVTCKLKSGRTRFGLFKTIRYKGFLSGFYCRIYVGWKLLDVAEMNEYNKDTFMQPDDKEYLKSVWAISPFKRVRGSNNAKS*	hallmark_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0067	cloud	direct	high	644	0.998	GCA_003048965.1_01169
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	83766	84119	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	46129	46482	GCA_003048965_1_2_108	GCA_003048965_1_2_108	+	412121	.	PFAM:PF10828.7	Rz-like-spanin	MLSPSLYLSGFLLLTTLFLGYRYQSLDNELSVTKERLSASDKMNLRLKDEINEQDRLISLKLDVIEKASKQKQALELKTNKVKERVLNEDKKDMSNALNLSVSYVLDGLRKQAGSSK*	phrogs_hmm	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0068	cloud	direct	high	353	0.997	GCA_003048965.1_01170
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	84076	84291	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	46439	46654	GCA_003048965_1_2_109	GCA_003048965_1_2_109	+	412121	.	.	hypothetical protein	MCLMGCVNKQEVANKYDKIPNHLLQAPIVADRNVTNQSDAGVLLIDVYSGYKTCVDQLEAIKDYETKRDKQ*	.	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0069	cloud	direct	high	215	0.995	GCA_003048965.1_01171
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	84434	84802	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	46797	47165	GCA_003048965_1_2_110	GCA_003048965_1_2_110	+	412121	.	PFAM:PF05106.11	holin	MDDLMDRLGFYFWVIIVGFVGGVLSIAGGNAKVASDGKAIINFFVGTISSTFICWVAYETAFYFTGKGSFSLAVGGFFAWRGTAWVSAVIDKAIDKKIDNFSDNNYDYTSRPPRDYDIGDEK*	phrogs_hmm	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0070	cloud	direct	high	368	0.997	GCA_003048965.1_01173
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	84799	85350	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	47162	47713	GCA_003048965_1_2_111	GCA_003048965_1_2_111	+	412121	.	CDD:COG3926	Lysozyme	MNYTQAFNLLMSLEFSRPENALHKNPTENGLTFMGIYEAAHPNWQGWGQVREAINAYGDLEKASVALYNDDALVELVGKFYKANYWDAMRLDEINSYQKQAEIFIFGVNAGCKNAIKAAQKVVGVTMDGILGANTLAAINAYNEVSFDKDYDRAEIAYYRTIISANPTLARYERGWINRAEKV*	common_virus_hmm	common_virus	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0071	cloud	direct	high	551	0.998	GCA_003048965.1_01174
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	85867	86244	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	48230	48607	GCA_003048965_1_2_112	GCA_003048965_1_2_112	+	412121	.	COG0607	Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]. 	MKKILLLGAVCCMLSADVKTVNISPDEIKKYDQIIDIRTPSEWQETGVIAGAKTITFNPNDKSAFLEELSKAVDIKKPIALVCRSGRRSTAAAAAIDSSDLKIINLDGGMSSLIEQGYKTTPYKK*	mmseqs_cdd	nonviral_gene	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0072	persistent	direct	high	377	0.997	GCA_003048965.1_01175
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	86396	86830	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	48759	49193	GCA_003048965_1_2_113	GCA_003048965_1_2_113	+	412121	.	cd01043	DPS protein, ferritin-like diiron-binding domain. DPS (DNA Protecting protein under Starved conditions) domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Some DPS proteins nonspecifically bind DNA, protecting it from cleavage caused by reactive oxygen species such as the hydroxyl radicals produced during oxidation of Fe(II) by hydrogen peroxide. These proteins assemble into dodecameric structures, some form DPS-DNA co-crystalline complexes, and possess iron and H2O2 detoxification capabilities. Expression of DPS is induced by oxidative or nutritional stress, including metal ion starvation. Members of the DPS family are homopolymers formed by 12 four-helix bundle subunits that assemble with 23 symmetry into a hollow shell. The DPS ferroxidase site is unusual in that it is not located in a four-helix bundle as in ferritin, but is shared by 2-fold symmetry-related subunits providing the iron ligands. Many DPS sequences (e.g., E. coli) display an N-terminal extension of variable length that contains two or three positively charged lysine residues that extends into the solvent and is thought to play an important role in the stabilization of the complex with DNA. DPS Listeria Flp, Bacillus anthracis Dlp-1 and Dlp-2, and Helicobacter pylori HP-NAP which lack the N-terminal extension, do not bind DNA. DPS proteins from Helicobacter pylori, Treponema pallidum, and Borrelia burgdorferi are highly immunogenic.	MSKVILQLNVIQADANALYIKFHDLHWNVKGIQFFSVHEYTEKAYEDMSEIFDDAAERALMLGGRPIVKAEELAKVTHIKHEPKEIYTPTEVLEIVLADYKHLLGEFKKLDELAEGDTTTQMYAQDQIAKFEKAIWMLNATLSK*	mmseqs_cdd	nonviral_gene	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0073	persistent	direct	high	434	0.998	GCA_003048965.1_01176
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	CDS	86913	87500	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	49276	49863	GCA_003048965_1_2_114	GCA_003048965_1_2_114	+	412121	.	PF18433.1	Domain of unknown function (DUF5610)	MKISQIANSYNSSSLKENVKSEISLHKDEKDISKKESEITNLTAKDISNSYFLQYQKEIVKSSSSNLLAQGGLSFNAPKNLSEILSGLDLANIGYNGKSLNELTSDEANDLISENGFFGIANTADRIASFVLNGAGDDIEKLKAGRESVANGFEDAKKIWGGELPEISQKTIEKTLESLDKKIAELGGNVLNVSA*	hhsuite_tools	hypothetical_protein	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_CDS_0074	persistent	direct	high	587	0.998	GCA_003048965.1_01177
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	206650	208419	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	1	1770	GCA_003048965_1_2_233	GCA_003048965_1_2_233	-	412121	.	.	hypothetical protein	MNIASLKHNFINLKDLENPTNILHTLKDKQGLKINNEQISSLKESIKASKVINITDAEIKEQNRHKILQKVEEILNNYSKNLIYSNNKIHSDELSKGYHFSENAYFKNIKASDSSSMLSTLKSGYLENTKFKNLNDYAYSNTLKTKYGEVEVFLDIYGDNDKLGTTKLENNSYLFSFDSNNDGVLDQKDILFDKLKVRGYDKDGNEKIAKLSDVMPRVDLRQFISTNVINHNQIEREELNRKAMITNNPDLYVDTKDIDYRHSYYASDPNTLFAAENRYEKIEKNDINNFFKKYAQKDGWVDLRHNNIFGKDSSFKNFAYLKVGFDDTARLSEFNPIIEPDKNYKKDENFSYTKFQKDSFMKFYKDYNAEFDAYNKMIENLGNNLKKFEENADAYISKLEKTKSAKMIAMENEFKQATGLEFSISNLKKVKKAFITNEATAAASLQDSDSVIAMKLNKDGTIRLKFDSGREIDVKELYNDTGKLNTSSELKTSINLEAKEMNNVQLNSLDFKDIGFMQGDKIVSLKDAGAIAIANLSNKFESKFLISLNNGKSISTREIYNISYLENVLKSKEKIDERDKFYKKVDIKA*	.	hypothetical_protein	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0001	persistent	direct	high	1769	0.999	GCA_003048965.1_01297
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	208647	208949	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	1998	2300	GCA_003048965_1_2_234	GCA_003048965_1_2_234	-	412121	.	PDB:1MUL_A	DNA-binding-protein	MKKAEFIQAVADKAGLSKKDTLKVVDATLETIQAVLEKGDTISFIGFGTFGTADRAARKARVPGTKKVIDVPASKAVKFKVGKKLKEAVAAGAAKKGKKK*	common_virus_hmm	common_virus	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0002	persistent	direct	high	302	0.997	GCA_003048965.1_01299
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	209074	209820	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	2425	3171	GCA_003048965_1_2_235	GCA_003048965_1_2_235	-	412121	.	COG3022	Cytoplasmic iron level regulating protein YaaA, DUF328/UPF0246 family [Inorganic ion transport and metabolism]. 	MALKILFSPSESKISLNTNNKFNGKDLIFPELFDKRVEILNRYDEFLKNANLDEIKKLFGLKELEESKQLRESLSQKGSIKAILRYDGVAYKHLNYRGLDNKAQKYIDNNVLIFSNLFGPILAKDEIPEYKLKQGEKLGGFEISKFYEKNFSKAVDNFLQNDEILDLRAKFYEKFYTIKKEYITFCFVKNKKIVSHHAKAYRGEVLRQIANKLIKNKDELMSLNFKNLKLIDMKKMGLKNEITFEICE*	mmseqs_cdd	nonviral_gene	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0003	persistent	direct	high	746	0.999	GCA_003048965.1_01300
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	209960	212275	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	3311	5626	GCA_003048965_1_2_236	GCA_003048965_1_2_236	+	412121	.	PRK14692	flagellar hook-associated protein FlgL. 	MRITNQLRFSQTLHDYQKNMTGVNKSYKQLSNGLKIQDPYDGAATYNDAMRLDYEATTLTQVVDATGKSVNFSKNTDNALQEFEKQLENFKTKVVQAASSVHSKTSLEALANDLQGIKNHLVNIANTSVNGQFLFSGSAVDTKPIDGAGKYQGNRDYMKTSAGAQVELPYNIPGHDLFLGKDGDYSKILTTNVRLADQTRTDIAYAPKFLNDNSKIKNMIGLNYASDSVVRSDGSYNGTINPDYDFLDNSNVNFPDTYFFMQGKKPDGTTFTSKFKMSANTTMAGLMEKIGMEFGNTKTTKVVDVSINNDGQFNIKDLTKGNQTIDFHMVAATSVAPNRGAIAQNNALDAVNSLEDLETMANNVPKTVHITEFVKSKYTDKDGNATNAFDYDKVRFERKDNELIANLPQVARRTGEYATDQTKLSEVSGTKESYDRNLYPKDVDARKRELFNIDNQEINLQVKSITGTKYDIKVKMGTAGGTNTPVQFEITSTPPGGTPSAPRTLTVYNSDEFGSYRTYASDFTYRQLMDIVAMAASDNIPNPPHAENANFDTDIEKVKRDQNYNAYKEALSKTKGAVETTLDDKGRMVLTDKTKSVTNIEVTMHDAKNSDKFDGDSTGRDTAGNAGHPQGKGSVFSFNENNALTIDEPSTSVFQDLDNMIEAVRKGYYRADANSNDPRNTGMQGALQRLDHLIDHANKELTKIGSQSRLLTATKERAEVMKVNVQTVKNNVIDADYAESYLKFTQLSLSYQATLQASAKINQLSLLNYLN*	mmseqs_cdd	nonviral_gene	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0004	persistent	direct	high	2315	1.0	GCA_003048965.1_01301
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	212628	214496	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	5979	7847	GCA_003048965_1_2_237	GCA_003048965_1_2_237	+	412121	.	PDB:4KFU_C	Genome-packaging-NTPase	MFQALSASSANGGIIGNFIVSALKEVIGSIGTAVAILMMFIISLGLAFRENFIIVLRKAFVDKEIKVHEERNLKEIKQKQLPKIERKRQKNNDIKEEELIEAQVLNDDEQNLDEEIEPEPEKESRASTINGVEILNEVAENKKLLDQIERGNVEKPKNFVLPPLKFLNDPPKRSHSVNETEIDQQISNLLDKLRKFKIDGDVVRTYTGPIVTTFEFRPAPHIKVSKILTLQDDLAMALKAQTIRIQAPIPGKDVVGIEVPNQNLETIYLKEILESEVFKNASSSLTMALGKDIVGAPFVTDLKKLPHLLIAGTTGSGKSVGINAMLLSLLYRNSPQTLRLMMIDPKMLEFSIYNDIPHLLTPVITEAKKAITALANMVAEMERRYKIMSQTRTKNIESYNEKMKEEGGEQFPYIVVIIDELADLMMTSGKDVELYIGRLAQMARASGIHLIVATQRPSVDVVTGLIKANLPSRISYRVGQRIDSKVILDQMGAESLLGRGDMLFTPPGSPGVIRLHAPFASEKEIETVVNFLKEQQDVAYDEKFLIEEGTSGSVATGTLGEDELDELYEEAKEIILSEQKTSISYLQRRLKIGYNKAANIIEQMEKMGVLSPVNAKGQREIL*	hallmark_hmm	common_virus	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0005	persistent	direct	high	1869	1.0	GCA_003048965.1_01302
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	214826	215698	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	8177	9049	GCA_003048965_1_2_238	GCA_003048965_1_2_238	-	412121	.	PDB:1Z19_B	Integrase	MTLNELFNNYISFYELILSPTTLRSDIATYNKHFKNSLGLKDIEDINFIDIQKFCNDLIKQDYKIKTIKNIVAKLKVIFKLGIKLELINKNPCDFIELPKFDNKRYFDYSIAIQKRFIKAISENTDASSDIFFFLLHGRRKNEVLSLKFSDINFKTRTYIIPFKINKAKRNMIYKMSDELFNRLYKRFLIAKKENKLNDYVFINPMTNDKFKDLRKSWASLLKKNNLPKIKLHDIRHLIGTYSINYLKIPIEQVSFTLGHTNITTTQKYITANVKKSKETIENLLKSISE*	common_virus_hmm	common_virus	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0006	shell	direct	high	872	0.999	GCA_003048965.1_01305
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	215698	215931	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	9049	9282	GCA_003048965_1_2_239	GCA_003048965_1_2_239	-	412121	.	.	hypothetical protein	MKKLLVDCSHYPCCYFPQLDLGISVEEFHLYNYEEFDTTFFETYYSFSKYGLCDFSSFDDLLEAFAKKFDYDSFEHI*	.	hypothetical_protein	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0007	shell	direct	high	233	0.996	GCA_003048965.1_01306
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	215942	217282	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	9293	10633	GCA_003048965_1_2_240	GCA_003048965_1_2_240	-	412121	.	PFAM:PF05840.12	nicking-at-origin-of-replication	MRARNLYGVSPLDVELCQAKLDSQREYMRSFSFVNVNGQVRNLLDISMSANFSDKYYAEVSNRVNVFSSFAIDYFQVPVFLTITLNGCFRGALNGDYSKFMPIDYRYLPDEVKYKAKNSVPLSISDLVAVLNHQWNLFIMRYSRKFKNIDRSYIRCFEPHKKDGVPHIHALFYVPAHTIDFMKRIYTDIFYAPQNLKTNAITSEQEKNGELNGFQTSINNPSGYVMKYIQKTFINLKETQDFDELSAWYVKHKVRRFISSRTKVPLWVYRKINFISTMQDFYHLNDLTNDHRAILEWNKKDDYIYINLPFNKEEIIYLNGRLEHYISGRLMNFYDRLKIDSQKDENAQDEIKSFGTNLKQRQILKLCDELFKSDEKPKPISRMKDYELVNYYQSLGGDVNAQHLAYVENLMLDRNLDNFTHYHKKHDLNAPDIDSFVNRFLICNEF*	phrogs_hmm	hypothetical_protein	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0008	shell	direct	high	1340	0.999	GCA_003048965.1_01307
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	217514	218656	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	10865	12007	GCA_003048965_1_2_241	GCA_003048965_1_2_241	-	412121	.	PDB:5WQ8_J	Type-II-secretion-system-protein	MKSLIKFLVLPLLFLNSLFATEIYTDLLDFARLTSKANNIAIVTDESIHQGEYYFIYEDEVKITIAMFRKMLEAKNLYLYKKDNFYYVSSQKLPDYDLRRIELKNYVYDDVNKILGQFDLNATYSTSSNSVFFRADDYIFDQIKEAISKIDKSLEQVTFKLTITETNLKDIKDLGTNLKGLLKPLNHGDLAYYINLITSPYITNSNIIKNDDRAFFGILNFLDTNGITKIISSPVLTAKNHTEVYFSSVQNIPYLVSKTDISNLNYQKTDSYEYKDIGLKINLKPIILSDHIDFDLHLILEDILSQSTSLTPIVSKKELKSSYSLKRGDVLVLSGINKTTTSKQRNGVPILKDIWLLKYLFSVEQDSEINSVLTLTIQII*	common_virus_hmm	common_virus	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0009	shell	direct	high	1142	0.999	GCA_003048965.1_01308
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	218607	219746	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	11958	13097	GCA_003048965_1_2_242	GCA_003048965_1_2_242	-	412121	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MITYLVGNPGSGKTYYAVYMIYQIFLFEPKKTFLSKFVKPKEKPSYLFCYTNINEFKFELSDKFKKFDFDEFYLGLRNLYALYKNGATDNEVNEKAKELNLYGCVFVLDECHNFFKDKKDEILVWWLTYHRHLYQDIYLITQDLTLVNNEYKRIAEKFYRAVDSAKRLFSKKFRYEVFASFRLYKKDRLEVINIPYLDEVFNLYHSGQTSNKKSFVRFYFLLAILFSIALVLYFYFVVMSIFKPDTPAENNLSNQDKTSFPNSQKNSISDFPDIFKDTSKHNIKNSSDIPEIYIYNITCVNSSCHFDEDYHLYPLSLLSYISSMYTPLYFYYEPKSHELVKYYYVFDKPVFQNLISKNNKGVSDEKFNQVPSSSTSVFK*	hallmark_hmm	common_virus	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0010	shell	direct	high	1139	0.999	GCA_003048965.1_01309
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	219749	220165	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	13100	13516	GCA_003048965_1_2_243	GCA_003048965_1_2_243	-	412121	.	.	hypothetical protein	MQAIIATIVLFFRFFKWENAINFVFKAVTFSKMVVINVILGALVLSYAAAVIYIINFIYSKFNYIIDYVNNLSVGNEKIVTTAFSILKSLGAWNAFCDVFSIFSPIFLSFFVIYATKIGITVFRFVRETLVTFILAKL*	.	hypothetical_protein	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0011	shell	direct	high	416	0.998	GCA_003048965.1_01310
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	220234	221505	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	13585	14856	GCA_003048965_1_2_244	GCA_003048965_1_2_244	-	412121	.	.	hypothetical protein	MKFLIRSFIFLSLLCSLAFSKNGDGGIYWAMRDYNLPSSFKPIDGKFLKGNNYFGLRSPETGYYFIYSFTISQDAYYFLGSRTPGFYVGYGHVYIGGARRVGRFGQRGSIGDYERYVASDNPKDPIFNYYDFIVFNSKEVARCKLNQEFNTDTMQCVDSCPAGQLWNVQTNACVVDCTDEDNHKFFTSDYTCINCSSALTIDDIARCYCSGLGSSYNPGYAWDPNKPNIVQAHCKDERLITFKFDKSKENPNKDKDKDKQDPNKDKDKDKDKEDPNKDKDKDNNNSTPGNGNNGGSSGGGSSGGNNQGNGGQGGGQGNNGNSENATPGNIDYGELEERTADLANTYKENINNLFEPIDGIKKSLNDTISKIKDGNLMSLKKGGIPNTCPLSFDIDMVFSVKKLSLIFVVFFRRLLLLFMSFSL*	.	hypothetical_protein	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0012	cloud	direct	high	1271	0.999	GCA_003048965.1_01311
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	221889	222005	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	15240	15356	GCA_003048965_1_2_245	GCA_003048965_1_2_245	+	412121	.	.	hypothetical protein	MAVTQAKKTITTAKKELRKNPNFVTSIKSKYTFNLFKN*	.	hypothetical_protein	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0013	.	unmatched_CDS	none	0	0	.
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	222028	222249	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	15379	15600	GCA_003048965_1_2_246	GCA_003048965_1_2_246	-	412121	.	.	hypothetical protein	MKKFLSSTKAKVLGGVAAVGAMSSNALAAGITMGADGTVTGDLNITPFMGVAGAVIVVLAAIFAVKKGLSLLK*	.	hypothetical_protein	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0014	shell	direct	high	221	0.995	GCA_003048965.1_01312
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	222347	222724	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	15698	16075	GCA_003048965_1_2_247	GCA_003048965_1_2_247	-	412121	.	.	hypothetical protein	MQIVKSEYDLKYVLRGGLVRSSASGKFEGNDYSSSVRISSSNIYDVVNEKTGFTDEVEQKVVFKIICPDNNTAGLVAAAIKEKFKKGEEIPVEGGFPNDQRIITIANPVEYFLYDTKPAKKPENK*	.	hypothetical_protein	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0015	shell	direct	high	377	0.997	GCA_003048965.1_01313
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	222711	222821	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	16062	16172	GCA_003048965_1_2_248	GCA_003048965_1_2_248	-	412121	.	.	hypothetical protein	MALNYFSPVWTKHLFGAMLNGVSKNKLKKGVKNANR*	.	hypothetical_protein	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0016	shell	ambiguous	low	15	0.135	GCA_003048965.1_01313
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	222919	223203	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	16270	16554	GCA_003048965_1_2_249	GCA_003048965_1_2_249	+	412121	.	PFAM:PF07141.10	terminase-small-subunit	MLKYVSFTGKKMTNAEIAKKLKIAEKTIYNWRKNRKELFEVIENGLNLKEDKENLYVNVTYKELIELLEKLSQQEIQYYISDIKTRILKKEIDK*	phrogs_hmm	hypothetical_protein	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0017	cloud	direct	moderate	251	0.881	GCA_003048965.1_01314
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	223200	223565	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	16551	16916	GCA_003048965_1_2_250	GCA_003048965_1_2_250	+	412121	.	.	hypothetical protein	MKKLLLILIFLTNALSYDFGEDVNIMGKWEITTEENQFINFLTSAGNKWEIEIKDDGFIYDLKNGNFIHEKWSYTREKGIISIEFYNQDNQGEKLFKGYFKKATNSYIKIIKKIDFNYYLV*	.	hypothetical_protein	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0018	cloud	direct	high	365	0.997	GCA_003048965.1_01315
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	223685	223963	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	17036	17314	GCA_003048965_1_2_251	GCA_003048965_1_2_251	-	412121	.	COG3636	DNA-binding prophage protein  [Mobilome: prophages, transposons]. 	MKEEFTKFNLEDYLTTDELRKEYLNQVLSDGDIEEFKRALFYIAKSKGIEKVAKKANLNRESFYKMFKENSKPRFESIFKVVNALDIKLVYA*	mmseqs_cdd	nonviral_gene	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0019	cloud	direct	high	278	0.996	GCA_003048965.1_01316
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	223960	224253	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	17311	17604	GCA_003048965_1_2_252	GCA_003048965_1_2_252	-	412121	.	COG3657	Putative component of the toxin-antitoxin plasmid stabilization module [Defense mechanisms]. 	MKILKSTTFDKWLNKLNNPVVKISILRRLDQIETKDHLGDYKFIDTDLYELRFFNRGGIRIFFTFNGDEIIILLNAGDKDSQSDDIKKAKEILKDYK*	mmseqs_cdd	nonviral_gene	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0020	cloud	direct	high	293	0.997	GCA_003048965.1_01317
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	CDS	224382	224603	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	17733	17954	GCA_003048965_1_2_253	GCA_003048965_1_2_253	-	412121	.	PDB:1A0P_A	Recombinase-XerD	MWWAVRNHLGYKRENNAHGLYVLRHTVASRLVSLKGFNAHKLMAFMGHTDIKSSLHYVHLNVDDIRDGVGVGA*	common_virus_hmm	common_virus	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_CDS_0021	.	unmatched_CDS	none	0	0	.
GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote	cenote	tRNA	45927	46003	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C1	8290	8366	tRNA-Arg	tRNA-Arg	+	412121	.	tRNAscan-SE score: 69.1	Arg	NA	tRNAscan-SE	.	C1	49863	37638	87501	GCA_003048965.1|PIRP01000002.1@region_37639_87501@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	tRNA	214604	214678	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	7955	8029	tRNA-Gln	tRNA-Gln	+	412121	.	tRNAscan-SE score: 52.9	Gln	NA	tRNAscan-SE	.	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	tRNA	214705	214779	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	8056	8130	tRNA-Met	tRNA-Met	+	412121	.	tRNAscan-SE score: 74.7	Met	NA	tRNAscan-SE	.	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_tRNA_0003	.	.	.	.	.	.
GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote	cenote	tRNA	208489	208572	GCA_003048965.1	PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965.1_PIRP01000002.1	GCA_003048965.1|PIRP01000002.1	GCA_003048965_1_2	GCA_003048965_1_2@C13	1840	1923	tRNA-Leu	tRNA-Leu	-	412121	.	tRNAscan-SE score: 69.3	Leu	NA	tRNAscan-SE	.	C13	17954	206650	224604	GCA_003048965.1|PIRP01000002.1@region_206651_224604@tool_cenote_tRNA_0001	.	.	.	.	.	.