core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	121694	122125	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	1	432	GCA_003116505_1_11_118	GCA_003116505_1_11_118	+	347576	.	COG1610	Uncharacterized conserved protein YqeY [Function unknown]. 	MSIREQILADIKEAMKAKDEFKRDTLRTLNAALKQVEVDQRIEMTDEVVLPLLQKEIKKRADSVELYLKGAREDLAKKEQSEIELIKAYLPAQLSDDELKEKIKSIIEKVGKNLGAVMKMAKDEIGASAEAKRISMIAKELLG*	mmseqs_cdd	nonviral_gene	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0001	persistent	direct	high	431	0.998	GCA_003116505.1_00391
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	122544	123416	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	851	1723	GCA_003116505_1_11_119	GCA_003116505_1_11_119	-	347576	.	PDB:1Z19_B	Integrase	MILNELFDNYISYYELILSPSTLRSDIATYNKHFKNSLGLREIEDINFIDIQKFCNDLIKQDYKIKTIKNIVAKLKVIFKLGIKLELINKNPCDFIELPKFDNKRYFDYPISIQKRFIKAICENSDPNSDIFFFLLHGRRKNEVLSLKFIDINFKTRTYTIPFKINKAKRDMIYKMSDELYTRLYKRYIVAKEQKRLNDYVFINPTTDDKFKDLRKSWASLLKRNNLPKIRLHDIRHLIGTYSINYLKIPIEQVSFTLGHTNIITTQKYITANIKKSQETIEILLNSISV*	common_virus_hmm	common_virus	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0002	shell	direct	high	872	0.999	GCA_003116505.1_00394
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	123403	124050	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	1710	2357	GCA_003116505_1_11_120	GCA_003116505_1_11_120	-	347576	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MSFKKVYKMKILNLFAGIGGNRLLWDNVLPGVKVTAVEFDHEIAKAYAKRYPNDNVIVGDAWDYAAKNYLDFDFIWASPPCQTHSRLNIANNIRNDRTKRLPDFRLYELIVYLQYFCKKSFVVENVVPFYEPLIKPTVKIGRHYFWSNFYISEKHFEKSTKLLKDIVISDFTDFDLSLFKNIKNKRQVIRNQVDSNLGKYILGCSLDKGLFDDFK*	common_virus_hmm	common_virus	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0003	cloud	direct	moderate	624	0.963	GCA_003116505.1_00395
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	124040	125380	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	2347	3687	GCA_003116505_1_11_121	GCA_003116505_1_11_121	-	347576	.	PFAM:PF05840.12	nicking-at-origin-of-replication	MRARNLYGVSPFDVELCQEKLDSQREYMRSFSFVNSLGQVKNLLDISMSANFSPKYYAEVSNRVNVFSSFAIDNFQVPVFLTITLNGCFRGALNGDYSKFKPIDYKYLPDEVKYKAKNLACLTISDLVAVLNHQWNLFIMRYSDKFKRIDRSYIRCFEPHKKDGVPHIHALFYVPAYTLDFMKRIYTNIFYAPQNLKTDAITSEQEKNGELNGFQTSINNPSGYVMKYIQKTFINLKETQDFDELSAWYVKHKVRRFLSSRTKVPLWVYRKINFISSMQDFYHLNDLTNDPRALIEWNKKDDYIYINLPFNKEEIIYLNGRLEHYIGGRLMNFYDRLKINNKVDEDASDEIKNFGSTLKQRQILKICDELFKTEKRVRPVSRMKDYELVNYYQSLGGDVNVQHLAYVENLMLDRNLDNFTHYHEKHYLNAPDIDSFVDRFLVCNEF*	phrogs_hmm	hypothetical_protein	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0004	shell	direct	high	1340	0.999	GCA_003116505.1_00396
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	125609	126751	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	3916	5058	GCA_003116505_1_11_122	GCA_003116505_1_11_122	-	347576	.	PDB:5WQ8_J	Type-II-secretion-system-protein	MKSLIKFLILPCLLLNSLFSAEIYTDLLDFARLTSKANNIAIVTDESIHQGEYYFIYQDEVKITISMFRKMLEAKNLYLYKKDNFYYVSSQKLPDYDLRRIDLKNYVVEDVNKILSQFDLNATYATASNSVFFRADDYIFDQVKDAIAKVDKSLEQVTFKLTITETNLKDIKDLGTNLQGLLKPLNHGDLAYYINLITSPYITNSNVIKNDDSAFFGILNFLDTNGITKIISSPVLTAKNHTEVYFSSVQNIPYLVSKTDISNVNYQKTDSYEYKDIGLKINLKPIILSDHIDFDLHLILEDILSQSSSLTPIVSKKELKSSYSLKRGDVLVLSGINKKTTAKQRNGVPVLKDIWLLKYLFSVEQDSEINSVLTLTIQIL*	common_virus_hmm	common_virus	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0005	shell	direct	high	1142	0.999	GCA_003116505.1_00397
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	126702	127826	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	5009	6133	GCA_003116505_1_11_123	GCA_003116505_1_11_123	-	347576	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MITYLVGNPGSGKTYYAVFMIYRLFLYEPKKTFLTKFVKPKEKPNYSFCYTNINEFKFELCDKFKKFDFDEFYLGLRNLYALYKTGATDNEVNEKAKELNLYGCVFVLDECHNFFKDKKDEILVWWLTYHRHLYQDIYLITQDLTLVNNEYKRIAEKFYRAVDSSRRLFSKKFRYEVYASYRLYKKDQLEIINIPFLQEVFDLYHSGQSSNKKSFVRFYFFLAVLVFVLLLLYFYFIVMSMFEVEKPDKDAPPIENKIPAPVSQQPTSSNLFFDDKKPKNNNIDIPEIYIYDITCLNNNCHFDDDYRLYPLSLITYISSTHKPLYFYFEPKSHELVKYYYVFDKPVFQNLQKNNKGVSDEKFNQIPNSSLSAIK*	hallmark_hmm	common_virus	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0006	shell	direct	high	1124	0.999	GCA_003116505.1_00398
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	127829	128245	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	6136	6552	GCA_003116505_1_11_124	GCA_003116505_1_11_124	-	347576	.	.	hypothetical protein	MPALIAMIVNFFGFFKWGKIVDYALRAVTFLKMVIINAILGGLILSYATAVLYIINFIYSKFNYIVDFVNNLSIGNDKLVVTAISVLRALGAWNAFCDVMAIFSPILLSFFIIYATKIGIVVFRFVRETLITFILSKL*	.	hypothetical_protein	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0007	shell	direct	high	416	0.998	GCA_003116505.1_00399
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	128249	129721	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	6556	8028	GCA_003116505_1_11_125	GCA_003116505_1_11_125	-	347576	.	.	hypothetical protein	MKFLIKLFCLLSLLSSFSFSKDVWVMTDDVLDGLKPMNNCEFFLGRKFLKCTIPETGTYRVFIVNFADDYLYFNPTRSSGYYYNTMYYYFIDKIQYSGYFKYLNKFSYYKYSESDAQNGKLFTYTNIIEFRINNSFAECSAGDNYGIKSNKCFPACPAGESWDYENEVCYSDCSDKNLNKFGYSNGTAQGGCVDCSNALSDDQIMRCACSGFGSSYEPGVISEYPSDPSFKLGSCKSGDQIRFKSRLNDKDKEKDKKKDNNSTNLGDNNKDKENPKPDEDKDKKNDNNSTNSSNKDNPKPDKKDNNENSNNSSGESGNSSNNNSGGSAGNGSSGGGGAGVETKPNPNSGNGKQDGKGDGKGEEGKGDDNIGPAKLDYEGLKASVDTFEGQFKTAIDDSFSFVNDVKASLTDTIQKIKDGNLMSLSKGSISSTCPLNYRINLIYFEKDVSFDICKSISPASQTLYYFFYVVFFVLFLVLIIKLFLFTFMGW*	.	hypothetical_protein	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0008	cloud	direct	high	1472	0.999	GCA_003116505.1_00400
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	130267	130485	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	8574	8792	GCA_003116505_1_11_126	GCA_003116505_1_11_126	-	347576	.	.	hypothetical protein	MKFLASAKSKVLAGVAAVSALSSNALAAGMTMAADGTVSGTPDIGPFMGIAGAIIGVLAIVFAVKKGFSLLR*	.	hypothetical_protein	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0009	cloud	direct	high	218	0.995	GCA_003116505.1_00402
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	130580	130960	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	8887	9267	GCA_003116505_1_11_127	GCA_003116505_1_11_127	-	347576	.	.	hypothetical protein	MQIVKSDYDLKYILKGGLVRSSASGKFEGNDYSSSVRISSSNIYDVENEKTGFTDEVEQKVVFKIICPDNNTAGLVASAIKEKFRKGEEIPVEGGFPNDQRIITIANPVEYFLFDTKPANKADKKQ*	.	hypothetical_protein	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0010	shell	direct	high	380	0.997	GCA_003116505.1_00403
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	131212	131421	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	9519	9728	GCA_003116505_1_11_128	GCA_003116505_1_11_128	+	347576	.	PFAM:PF10654.8	DNA-binding-protein	MTRQELADKLNITRNTLTNWEKEKPELIRLINQGLALDEQISETKKFLEKLEKIKEKANNGKINIKETK*	phrogs_hmm	hypothetical_protein	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0011	shell	direct	high	209	0.995	GCA_003116505.1_00404
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	131421	131888	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	9728	10195	GCA_003116505_1_11_129	GCA_003116505_1_11_129	+	347576	.	.	hypothetical protein	MQKILIILIFSINAFCYDFGEDVNIMGKWEITTENNQFVNFMTSPGNKWKVEIKDDGFIYDLEDGKFIHEKWSYTREQGVINIEFYNQNNSGEKMFNGRFKNLTNNDIKIIKKIEFNKYLVEIIGTNDKLIMQRLGDSKQVKNTKLKKDIKIEMK*	.	hypothetical_protein	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0012	shell	direct	high	467	0.998	GCA_003116505.1_00405
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	131907	132185	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	10214	10492	GCA_003116505_1_11_130	GCA_003116505_1_11_130	-	347576	.	COG3636	DNA-binding prophage protein  [Mobilome: prophages, transposons]. 	MKEEFTKFNLEDYLTTDELRKEYLNQVLADGDIEEFKRALFYIAKSKGIENVAKKANLNRESFYKMFKENSKPRFESIFKVVNALDIKLVYA*	mmseqs_cdd	nonviral_gene	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0013	shell	direct	high	278	0.996	GCA_003116505.1_00406
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	132189	132308	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	10496	10615	GCA_003116505_1_11_131	GCA_003116505_1_11_131	-	347576	.	.	hypothetical protein	MFRRIKRNERFIVMSIFGLFLIVVFAVLVTWAGVKISKV*	.	hypothetical_protein	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0014	cloud	ambiguous	low	39	0.325	GCA_003116505.1_00407
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	132627	132848	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	10934	11155	GCA_003116505_1_11_132	GCA_003116505_1_11_132	-	347576	.	PDB:1Z19_B	Integrase	MWWAVRNHLGYLGTSNTYGLYVLRHTVASRLVSLKGFNAHKLMAFMGHTDIKSSLHYVHLNVDDIRDGIGVVV*	common_virus_hmm	common_virus	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0015	.	unmatched_CDS	none	0	0	.
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	133183	134061	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	11490	12368	GCA_003116505_1_11_133	GCA_003116505_1_11_133	-	347576	.	.	hypothetical protein	MNIPFSGDEYEIENLSKLDDKMLVAVKVSLPKQTTLYDATKGDLNKDGIEDVAVVTQETFKDKFLPFSDGCDESTKDDKWCQIVNKNRRGIVILLSNGDKYEAVVTKRDIFESPHEDGGAYDPPELAVEIENSELKFFYRHGKYGYWVYVFALDGKDFKLIKHFSSDNHGPKPKHIVQIDFINHRLEKSANLLYQGNEEYKRYEECIEKYRSFDDTQEEDDYDAILIRKTYELKTQKILLSEVKKVDYIDGRWLDDLQNSKELVKILKIDFWGDEYLGDNADELARCVADKI*	.	hypothetical_protein	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0016	shell	direct	high	878	0.999	GCA_003116505.1_00408
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	134218	136113	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	12525	14420	GCA_003116505_1_11_134	GCA_003116505_1_11_134	-	347576	.	PDB:4KFU_C	Genome-packaging-NTPase	MFQALTTSGANSGVIGGFIVSALKEVIGAIGTAVAILMIFIISLGLAFRENFIIVLRKAFVDKEPNGYEEKSRSVKEVRARQIPKIERKKPKDEEIKEEELIDAQVLNDDEPNLESEPEFEPEPEMEPAQESRPATIGGVEILNEVAENKKLLDQIERGKVEKPKDFVLPPLKFLNDPPKRSHNINEAEIDQQISNLLDKLRKFKIDGDVVRTYTGPIVTTFEFRPAPHIKVSKILTLQDDLAMALKAQTIRIQAPIPGKDVVGIEVPNQNLETIYLKEILESEVFKNASSPLTMALGKDIVGAPFVTDLKKLPHLLIAGTTGSGKSVGINAMLLSLLYRNSPQTLRLMMIDPKMLEFSIYNDIPHLLTPVITEAKKAITALSNMVAEMERRYKIMSQTRTKNIESYNEKMKSEGGEQFPYIVVIIDELADLMMTSGKDVELYIGRLAQMARASGIHLIVATQRPSVDVVTGLIKANLPSRISYRVGQRIDSKVILDQMGAESLLGRGDMLFTPPGSPGVIRLHAPFASEKEIETIVNFLKEQQDVIYDEKFLAEEGSSAGSTAGALGEEELDELYEEAKEIILSEQKTSISYLQRRLKIGYNKAANIIEQMEKMGVLSPVNAKGQREILV*	hallmark_hmm	common_virus	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0017	persistent	direct	high	1895	0.999	GCA_003116505.1_00409
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	136467	138782	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	14774	17089	GCA_003116505_1_11_135	GCA_003116505_1_11_135	-	347576	.	PRK14692	flagellar hook-associated protein FlgL. 	MRITNQLRFSQTLHDYQKNMVGVNKSYQQLSNGLKIQDPYDGAAVYNDAMRLDYEATTLTQVADATGKSVNFAKNTDNALKEFEKQLENFKTKVVQAASDVHSTTSLEALANDLQGIKNHLVNIANTSINGQFLFSGSAVDTKPIDGSGKYQGNRDYMKTSAGAQVELPYNIPGFDLFLGKDGDYNKILTTNVMLADQTRTDISYAPKYLDENSKIKNMIGLNYASDSVVGSDGSYKGTIEPDFDFLDTSNVNFPDTYFFMQGKKPDGTTFTSKFKMSADTSMAGLMEKIGMEFGNTKTTKVVDVSINNDGQFNIKDLTKGNQTIDFHMVAATSVAANRGAIAPNNTLDTVNSLQSLENMANAVPKTVHITEFTKSKYLDKDGNLTNAFDYDKVRFERKDNELIANLPQVARRTGEFATDQTKLSEVSGTKESYNRNLYPRDVDARKRELFNIDNQEIGLQVKSITGTTYDIKVKMGEAGGVNTPVQFQITSTTAAGVVSPTRNLTVYNSDEFGSYRTYASDFTYRQLMDIVAMAASDNIPDPQNVENANFDTDIEKVRRDQNYNAYKDALSKTKGAVEVNLDDRGRMVLTDKTKSVTNIELTMYDAKNGDIFDGDSTGMNTAGAASHPQGKGSVFSFNENNALTIDEPSTSVFQDLDDMIFAVRNGYYRADANNHDPRNTGMQGALKRLDHLIDHANKELTKIGSQTKLLTATNQRAEVMKVNVLTVKNDVIDADYAESYLKFTQLSLSYQATLQASAKINQLSLLNYLN*	mmseqs_cdd	nonviral_gene	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0018	persistent	direct	high	2315	1.0	GCA_003116505.1_00410
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	138924	139670	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	17231	17977	GCA_003116505_1_11_136	GCA_003116505_1_11_136	+	347576	.	COG3022	Cytoplasmic iron level regulating protein YaaA, DUF328/UPF0246 family [Inorganic ion transport and metabolism]. 	MALKILFSPSESKISLNTNDKFDGKNLIFSELFDKRAEILKRYDEFLKSANLDEIKKLFGLKELEDSEQLRESLSQKGSIKAILRYDGVAYKHLNYRGLSDDAQKYIDNNVLIFSNLFGPILAKDEIAEYKLKQGEKLAGFDICKFYEQNFSKAVDSFLENDEILDFRAKFYEKFYVVKKEFTTFCFLKNKKILSHHAKAYRGEVLRQIANAKVTNKDELMGLNFENLKLVDMKKIGLKNELTFEICE*	mmseqs_cdd	nonviral_gene	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0019	persistent	direct	high	746	0.999	GCA_003116505.1_00411
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	139795	140097	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	18102	18404	GCA_003116505_1_11_137	GCA_003116505_1_11_137	+	347576	.	PDB:1MUL_A	DNA-binding-protein	MKKAEFIQAVADKAGLSKKDTLKVVDATLETIQAVLEKGDTISFIGFGTFGTADRAARKARVPGTKKVIDVPASKAVKFKVGKKLKEAVAAGAAKKGKKK*	common_virus_hmm	common_virus	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0020	persistent	direct	high	302	0.997	GCA_003116505.1_00412
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	CDS	140321	142081	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	18628	20388	GCA_003116505_1_11_138	GCA_003116505_1_11_138	+	347576	.	.	hypothetical protein	MNVAPQKFDFINLDDLQNLSKRFLNHSNQNTLKLNSSQLNELYEANKTDTIYVTEADIKEYNKRLATQKAEEILKDYSQNLIQSNNKFYSDEASNGFRKNAYFKNINATDDAVMLPVLKSGYLENTKFKNLNDYAHSNTLKTNYGEVEVFLDIYGDNDELGVGKLENNSALFSFDSNNDGTLDQKDMLFDKLKVRGYDKDGNEKIANLSDVMARIDLRQFISTNVINHNQITREELNHKAVITNNPDLYVDTKEIDHRHSYYASDPNTLFAAENRYEKIGKNDINNFFKKYAQNDGWVDLRHNNIFGKDGSFKNFAYTKIGFDESARLSEFNPIIEPNKEHKKDENFSYTKFQKDSFMKFYNDYSAELDAHNKMIENLSANLKKFDENADAYISKLEDTKSAKMIAMENEFKQVTGLDFSISNIKKVKKAFTTNEATAATALRDSDSVIAMKLNQDGTIRLKFDSGRELDVNELYNDTGKLNTPSELKTSVNLDAKKMDNAQLNSLNFNDIAVMQNDKITSLKDAGAIAIINLSNKFESKFLISLNSGKSISAREIYNISYLENDLKNKEKIDERDKFYKKVDTRV*	.	hypothetical_protein	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_CDS_0021	shell	direct	high	1760	0.999	GCA_003116505.1_00414
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	91831	93405	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	1	1575	GCA_003116505_1_28_100	GCA_003116505_1_28_100	-	146063	.	COG0025	NhaP-type Na+/H+ or K+/H+ antiporter [Inorganic ion transport and metabolism]. 	MIEHLLLFFALLAIIIALVMVSNRLKVAYPVLLVLGGLAISFVPNLPSIKIDPELIFIIFLPPLLYEAAWANSLKELYKWRRTIGSFAFIVVFISAAAVALIANLVIPGFSLALGFMLGAIVSPPDAVSTAAILKFVKAPRRISAILEGESLLNDASSLIIFRFAAVAVTTGQFIWYKAATTFLWMVAGGVLAGLVVALAAYFLHKNLPTDENSDTIMTITTPYIMYILAEELGASGVLAVVCGGLYLSTKRNEIFTASTRIHAVPVWNNFIFLLNGLAFTMIGLDLPEILAGLKRSGVSLFEAVSYGVLVTAVLIIIRLMASYGAVYITMFMKRYISVADDRNPGKATPFIVGWAGMRGVVSLAAALSIPAMAGSEPFPHRDLVLFITFVVILLTLVVQGLSLPLLIKSVKFPDFNDHMPNELARIKIKKAIAEASLKFQSEKFCNEENFLFQKLKEVWNFELSNENFEISDEVRQTYFEILNEQRKALCELNKDPKIDEEVIRTFLYHIDLEEQRWQPHSEH*	mmseqs_cdd	nonviral_gene	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0001	persistent	direct	high	1574	0.999	GCA_003116505.1_01729
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	93563	94117	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	1733	2287	GCA_003116505_1_28_101	GCA_003116505_1_28_101	-	146063	.	CDD:COG3926	Lysozyme	MNNFTNAFYTLMSLEFNSPKNALHKNPNEKGLTFMGIYEAANQSWQGWGQVRAAINAYGDLEKASVALYNDDNLVELVGKFYKANYWDAMRLDEINSYQKQAEMFIFGINAGCKNAIKAAQKVVGVTMDGILGANTLAAINAYNEASFDKDYDRAEIAYYRAIISANPTLARYERGWINRAEKV*	common_virus_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0002	cloud	direct	high	554	0.998	GCA_003116505.1_01730
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	94128	94484	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	2298	2654	GCA_003116505_1_28_102	GCA_003116505_1_28_102	-	146063	.	PFAM:PF05106.11	holin	MDDLLNKAGFYFWVAVVGFVGGVLSLENDSHKPLHSGKAIINSIISAISSMFICWIFYEVTFYFTKENRFSLAIGGFFAWRGTAWISTTVDKAIDKKLSCLDNSYDDFSQKPPRDINF*	phrogs_hmm	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0003	cloud	direct	high	356	0.997	GCA_003116505.1_01731
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	94581	94790	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	2751	2960	GCA_003116505_1_28_103	GCA_003116505_1_28_103	-	146063	.	.	hypothetical protein	MAGCSSKPEVIVKTQYQDVYVPVACIEKMPTKPKYSPENLESAKELIGYFLTCEELLKGCVNGSDHKKD*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0004	cloud	direct	high	209	0.995	GCA_003116505.1_01733
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	94810	95160	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	2980	3330	GCA_003116505_1_28_104	GCA_003116505_1_28_104	-	146063	.	.	hypothetical protein	MSDKFYIGAILFLSFVVGVLYWLNNNATQKIDELTKKIALKEASNAVVVSNLETCNAKIELANTSLKALSVPKQDEAKIKERVVTRVERVAVPIKDAACEEKLNFYERLLNEANSK*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0005	cloud	direct	high	350	0.997	GCA_003116505.1_01734
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	95150	95782	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	3320	3952	GCA_003116505_1_28_105	GCA_003116505_1_28_105	-	146063	.	PDB:5O6V_E	Envelope-protein	MLKFKELLQILAIIAVELPLEILSYIVVPIALAFCNKQSEHLPKWAKWFEDASDLYDGENSAINGDSGWRKEHYPNGKNRTYFARLRWLYRNRIGYFSSKINGVKVSDIEPSSVRVQGNPKATSNGGVISDFCKVTCKLKDGRTRFGLFKTIRYKGFLSGFYCRIYVGWKLMDVAEMNEYNKATFMQPDDKEYLKSVWVINPFKRVQNER*	hallmark_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0006	shell	direct	high	632	0.998	GCA_003116505.1_01735
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	95932	96273	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	4102	4443	GCA_003116505_1_28_106	GCA_003116505_1_28_106	-	146063	.	.	hypothetical protein	MKKYKNQNNEIYAYEDDISKELLNQRVKELGLTPISDEEASKLLEPKIDEQDKQLAEIEAGIAECENYIRHALIIGNNTVLENLRAEYKELIAEREKLNVTSEPITAAPTDHL*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0007	cloud	direct	high	341	0.997	GCA_003116505.1_01737
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	96284	96940	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	4454	5110	GCA_003116505_1_28_107	GCA_003116505_1_28_107	-	146063	.	PDB:2FKK_A	Baseplate-protein-	MIYEKPKNEIFASDAKDGEIVEFPNVKRGWGVTENLGFIPPMEYFNAAFNRVDKSLAYQLQRGVGEWDKDLEYPIGAVVSLNGVVYVAKSQNTNKNPANEVEIWDVITTRKWSDSKFAKIDQVIGANQTTKVVTTQRAFNVFYENTTDKPIMLYIDAWNNNTILQITLYVTIGNTTLTSSNTATTTAATHTNITVLIPPKTRYKVTSNGALYSWIELS*	hallmark_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0008	cloud	direct	high	656	0.998	GCA_003116505.1_01738
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	96940	97578	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	5110	5748	GCA_003116505_1_28_108	GCA_003116505_1_28_108	-	146063	.	pfam11041	Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	MVELIWQYRKKPRARATAKLLNDEVYKTFDDAIKVAEILNIDTASGYALDLVGRHVGVSREQQNLILKDFFAFTQTEKKQGFNKGEFYRLGNSLKGSFYLNDSDYRFLIKAKIIKNYQTGTLENIYKSLEFLLGAGNFIFDNYDMTLNLVLKNTNTTQFLINLIFKNDILARPVGVVLNVILIADKKCFGFKQNKANLAFGVGKFARIYKEQ*	mmseqs_cdd	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0009	cloud	direct	high	638	0.998	GCA_003116505.1_01739
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	97578	98699	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	5748	6869	GCA_003116505_1_28_109	GCA_003116505_1_28_109	-	146063	.	PFAM:PF04865.13	Baseplate-J-like-protein	MRVSENRIIIDELEAIKERLENGFKAIYGENLELGSSTPDGQMIGLFSEALSEVNQVLTFITQMLDPYLATGEWLDQRVAYAGLLRKMADYSRASGVTIHGASGTIIKKGTILKDKNSNLWVTDYEVTLGTEGSKAVSITSQEMGAFRINEQDELEMQEIILGVDRIVATQNSTLGADEESDGDLLLRFMQSHSINNNDERQGLESYLLNLKGVKQCKVLENYTNQTDINGVASHSLNVVILGGDDRQIGEAILKKKIGGCGVQGQTKVVVDFLGQKREVKFDRPTQINPKIVLRLKRTEGATDINTGKIKDLLSEHIFSIGEDVYISRLYSIINEVKGFEVTQFKINGGQSLPVAVREICVINKNDIDLAVV*	hallmark_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0010	cloud	direct	high	1121	0.999	GCA_003116505.1_01740
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	98686	99024	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	6856	7194	GCA_003116505_1_28_110	GCA_003116505_1_28_110	-	146063	.	PFAM:PF10934.7	baseplate-wedge-subunit	MRVRAIDSEGDWLLGHKADSAAIAQNVKTQILSLYNDWFLDFENGVRWFNYLSKNPNTDKMRDEIKRQILSVEGVSSLEILNINTNERKATIEVQYRDIYDESQRLYINASE*	phrogs_hmm	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0011	cloud	direct	high	338	0.997	GCA_003116505.1_01741
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	99034	99702	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	7204	7872	GCA_003116505_1_28_111	GCA_003116505_1_28_111	-	146063	.	PDB:4RU3_A	phage-baseplate	MNDPNLTQIFDSGLLSFEAGVHTALPAKVLKFNAGDNTVQVELMVNELKRDGVSVPLPPLDDVPVQFFRGGDFVITTPIRKGDHGLCVFAERCIDGWFASATKSEPLDFRLHDYSDGFFLTGFSPRPEAVKDVDLDGVCMRTLSKSTYLKLTEGKIIIKGNIEQTGDYKQIGNKNLVGNFSQVEGNSVSSGTITAKDMIGSGVSLKHHTHGGDSGGTTTQPN*	common_virus_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0012	cloud	direct	high	668	0.999	GCA_003116505.1_01742
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	99699	100529	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	7869	8699	GCA_003116505_1_28_112	GCA_003116505_1_28_112	-	146063	.	PDB:1WRU_A	Tail-protein	MRQYGRRYRLEIGNNKQSIVIDNLAISFNIEKTISEEPNTSKIEIYNLNANNRNQIANKIFNQVKLFAGYDEPRLIFAGQITQAYTSRNDLDFITHIECGDGQNDYSKSRLYTTLKAGVKDSDVVNMCVKAMSSSKQGVVDLPKDKALPRCKVLSGDIKDYLKHVAKNNDANWHILDGNLNILPKNKILNDSEGFVLSEKTGLINSPEKTDDGLRVTCLLNPKLNIGSLVRIQSILSEYDGDYKITQLTHSGDFLNDTWQTELIAINGKFHKVEKK*	hallmark_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0013	shell	direct	high	830	0.999	GCA_003116505.1_01743
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	100526	100861	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	8696	9031	GCA_003116505_1_28_113	GCA_003116505_1_28_113	-	146063	.	7KH1_B4	Myoviridae, Phage, Baseplate complex, VIRUS	MTTTELKQTQNFNIFGMELELTLKYNEVGAVWQFDLTDLNTNKILAFNKGLAVNAPSLINKNLPFILMLVDTTKSGVNCVDFSELGERLKLYAVSKKEFNAAMSEIAKDRT*	hhsuite_tools	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0014	shell	direct	high	335	0.997	GCA_003116505.1_01744
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	100873	101568	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	9043	9738	GCA_003116505_1_28_114	GCA_003116505_1_28_114	-	146063	.	PFAM:PF06995.10	tail-fiber-protein	MIEVTSRKIGTFRLDATEQENNKSTLRTTKNPIESGANVADHAVLEPKEITIKGKIVAYEPPSFTQFDEIMQVIRFNLPYIKTAHRFTQKAYKLYNNVKHIKNEVMRYARIFGVDKKIREIAPFLTDGKENKDNSTAKNRLQSLYDKLLEVQKSGEFLIVTTGLKTYRNMLITSIEVTTESDLYADVTLTLEEVFIVETKTAKGLNVGKRGVNLGKTEPKLKKSSLLKDIF*	phrogs_hmm	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0015	shell	direct	high	695	0.999	GCA_003116505.1_01745
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	101568	103205	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	9738	11375	GCA_003116505_1_28_115	GCA_003116505_1_28_115	-	146063	.	Uniprot:A0A088C3U4_9CAUD	tail-tape-measure-protein-	MPLKGYIVLLDEFLYKIGFDVDSGKIKQIEQGLKNISNIAKQTAQPISDAVKAGMERNAELIAKLEQAKNKGVEWCEEAKGQAEELTTSFHEVAEAEEKVGEKAKEAAKETKKLTEKKPAIGLKQELSNIRNKFMLIGAAATAASGLIANYLTVPLQNIQELAKQKNKLFDITQAEIDQAKEYQDRLQESKTAMQSITTQVALKLIPVVNQSLKGFNNFLKANKALVVEGLTNVFKWILKLGQVFTNTFRFLNKIISSTIGWKAALLILVGVLAVVKRAMLAAFLTNPIGWVIMLIGGLILLIDDLMTYLDGGESLFGDYWKPFIEWGKKAIIWFKSVKPTIEQVLNNIMAIFSGIFNAILGIFKIFIGIFTADFDLIEQGWGELWDGVKTTFKAWVETIEMIVAAFIDVIQNFFSIAWKFISAGFENLGKAIMKPFELAFKWIKDQYNKYIAPIVDTVKNFDIGQTASDMWESTKSFLGFGNDTPKAALATQYADNNRSVQYNGGTATTTININTNNPQMANQIINNRQKSDLAFTQANLRGGY*	hallmark_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0016	cloud	direct	moderate	1617	0.987	GCA_003116505.1_01746
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	103364	103453	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	11534	11623	GCA_003116505_1_28_116	GCA_003116505_1_28_116	+	146063	.	.	hypothetical protein	MKIFLKGLKELLEALAALLAIIEILKGWL*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0017	.	unmatched_CDS	none	0	0	.
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	103506	103622	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	11676	11792	GCA_003116505_1_28_117	GCA_003116505_1_28_117	+	146063	.	.	hypothetical protein	MDIVFDVAQLVVCIALIYEMWRNHKLTKRIKELENAKK*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0018	shell	direct	high	116	0.991	GCA_003116505.1_01747
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	103609	103797	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	11779	11967	GCA_003116505_1_28_118	GCA_003116505_1_28_118	+	146063	.	.	hypothetical protein	MQKNKTPKRKDFVEIFGIPYATLNDWAKSGEDNWRFRLLDFLSNLTFEEIEIIKNRSKKIEG*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0019	shell	direct	high	188	0.995	GCA_003116505.1_01748
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	103965	104369	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	12135	12539	GCA_003116505_1_28_119	GCA_003116505_1_28_119	-	146063	.	pfam10876	Phage tail assemb.y chaperone protein, TAC. This is a family of putative phage tail assembly chaperone proteins largely from Haemophilus and Xylella species.	MQTYELMINENKYVLRSANFFETKTQLQSLLGLAKDAIKMQGEDVNIDVGQIIANIGSAAFSGVENFILKYASVVNAEGGEILLRNVSQAETHFNANRGDYAQLILEGLKYHFLDFLPAGAKSLAGITAYLNKA*	mmseqs_cdd	nonviral_gene	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0020	cloud	direct	high	404	0.998	GCA_003116505.1_01749
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	104369	104803	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	12539	12973	GCA_003116505_1_28_120	GCA_003116505_1_28_120	-	146063	.	PFAM:PF11681.7	virion-structural-protein	MARYQHDTIVLLINGYEITAYADGSDVISIENAADAGAYTIGASGRGVFTGSCNQSGTLTLKLLQHSEDCKFLQDLYNQQRTEFKSFSPMTMEFKDTLNGDELSGLNGFFVNDGGLKRGDAHNPTEFKIAFERISKRLENGAGN*	phrogs_hmm	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0021	cloud	direct	high	434	0.998	GCA_003116505.1_01750
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	104813	106318	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	12983	14488	GCA_003116505_1_28_121	GCA_003116505_1_28_121	-	146063	.	PDB:5LI4_E	tail-sheath	MSLTIKRIVNIQLNEQGQIAKNRDFSVIAILSDDWCEAYDDVNTRFVSIASANDAALNFGSESRATKAAKAIFSVSGVKKAIVAKWVKENKTTQATANELRGSALNVGINKLKAITSGSFKLNVGGADKVYTALDFSSCVDFEAVATKLTAAISKDGIKAVYDAEGNRFIIRAATAGKNDNTRLGYFEKADSGDFVGVLLNLVSGKSDIYVGKDSVTQKKESLSEALDKLFNATQGFYGVYSSAILADEEVAELNEWITSAQNPSVAGYTITRKAQLESANTNVIKKIADKDSGRFFATYNNTGDEHAGAELLAKALSTNWEGSNTAQTIKFKNLKTAGTDETITLNLAEKCDKLGVNYYTDYDGVSMIAEGVALGGKFIDEVVGLDAFNNRTQIAVFNVLKGAKKVPQTDKGQVRLIAAVKQVCEQFVKNGFIAPGQWRGDPVGTLESGDYLDLGYYVYSPSYTEQLQADREARKSVPINVAIKLAGAIHSVDILINYNR*	hallmark_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0022	cloud	direct	high	1505	0.999	GCA_003116505.1_01751
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	106315	106806	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	14485	14976	GCA_003116505_1_28_122	GCA_003116505_1_28_122	-	146063	.	7KJK_C5	Myoviridae, Phage, 6-fold neck region	MRALDLTGLRVLIAKALNVDESLVRDSYSKTLNDKTAYLTLHLLTSTQKGREYKFIEGEKEVITSTREAVVSVNAFGKNANFIIEKLNTLFYSSECLKELKILGLGLVTISPIRNLSQIVGGGVEERASIDLTLSYINRVEVSQNEIKTAEIKTADFGIKVNR*	hhsuite_tools	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0023	cloud	direct	high	491	0.998	GCA_003116505.1_01752
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	106745	107062	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	14915	15232	GCA_003116505_1_28_123	GCA_003116505_1_28_123	-	146063	.	PFAM:PF10665.8	head-closure-knob	MINVSELIEDSDFCQVIKRGDDEFKAVVQFLSNDEMQRLPEGERYKEAIRIDTKFNLNLQDVITYKGVNYRIINMQDWSEYGYKNFAGVRFDGLESFDSQGFERR*	hallmark_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0024	cloud	direct	high	317	0.997	GCA_003116505.1_01753
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	107059	107487	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	15229	15657	GCA_003116505_1_28_124	GCA_003116505_1_28_124	-	146063	.	PFAM:PF05069.12	Virion-morphogenesis-family	MIEKLEGKIAEIMGLSVVVGVTAKSNARSDELTNADLAMIHEFGSPAHNIPERSFLRKPLINNAEAVANLAKTAIGKFIAGEISLEAALGYVGEEAKGISKEAITDGISPALKPTTIKRKKSSKPLIDTGQLLNSITYEVRK*	hallmark_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0025	cloud	direct	high	428	0.998	GCA_003116505.1_01754
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	107484	107855	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	15654	16025	GCA_003116505_1_28_125	GCA_003116505_1_28_125	-	146063	.	PFAM:PF13262.5	head-to-tail-adaptor	MTAADFLNKFPEFQAVDEARIKLSLDEAKLQVTEKIWGRFYEVGVLHLAAHILATQGALSTEATTNPQPLREIGSKAVGSLSVSYTSGKTGFESESGSYYLTKYGQRYLELKKLVTPHFGLVR*	hallmark_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0026	cloud	direct	high	371	0.997	GCA_003116505.1_01755
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	107858	108805	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	16028	16975	GCA_003116505_1_28_126	GCA_003116505_1_28_126	-	146063	.	PDB:5WK1_D	Major-Capsid-protein	MKLRDEEILSQLASAAASFNEGFKEREYPEVQLANFVPITQKGDESIDALDYGEIEGTQDLENGLIDENTTSLETEDLNITAKKGLYLSWAKSAVYTSEAVARAKRLEIELDTAKLSNLERVALLTMQKTALVGHTKLPAVQGLLNNTSVKAKDLTAGAAISAMTGAEARAFFLSLIEFGYEQNGGLLIPNTIAIDSKDLMALASKYDNSIGAVNGGINALTAIKEALSQSTGVDVNIVGIPLGFAQGLGGGKGKNRAVVYTKSEDVLSTDWALSPTAMQPFQRSVLSWEIAVKSKFTGTLIRQLDKVAYVNYKA*	hallmark_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0027	cloud	direct	high	947	0.999	GCA_003116505.1_01756
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	108807	109250	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	16977	17420	GCA_003116505_1_28_127	GCA_003116505_1_28_127	-	146063	.	PFAM:PF11133.7	virion-structural-protein	MGYLDKRAFAGQVARAGESAVTALAYVNNDTEVIPFGVFVTSKDGGVAKISKATDQIMGVSLKMGTKSENKPGEVMSVLSISYGSEVWVQGKEAHGLAVGDTIQVEATAGADAGKVAKAATLATTAAKDKFYVTEVSGNLVKLMRKE*	phrogs_hmm	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0028	cloud	direct	high	443	0.998	GCA_003116505.1_01757
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	109250	110368	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	17420	18538	GCA_003116505_1_28_128	GCA_003116505_1_28_128	-	146063	.	PFAM:PF09979.8	head-maturation-protease	MDFKINDDGYIITKAKMASIQPMEYLGEEIGRTSGKVYKVFRDEKEVFSPETIKSFEGKPLTLTHPDDDVTAKNWKDTAIGHIQNVRREGDFLVGDAYINDEIAIKIIKEQGIKEVSCGYDSKLIERDGKIWQTNIRGNHLAVVAEGRAGKDCKLGDSKRIKMKFIDKLKGALTAAKKFKDNDEVGKEKVEEANEANNELVDLLEQALSGAEEVSTKLDETTSELEKTKTELADVKAKNVKDSDGTDENAEIAELKAKVEALEKENAELKAEIEKLKGEAATTEAVTDAKANFSHVKLSDAKNARGVYEAVILDSKAFEASELKKLSDSEIHALYLGLKAAKRTKDNSGSVLDKFYDAKPNKIDLNKKFGGK*	phrogs_hmm	nonviral_gene	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0029	cloud	direct	high	1118	0.999	GCA_003116505.1_01758
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	110369	111193	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	18539	19363	GCA_003116505_1_28_129	GCA_003116505_1_28_129	-	146063	.	PFAM:PF04233.13	Minor-capsid-component	MKPTLSELFSKKRNKEFKPVQPSKRAEVKYRNALLLLIASLKTALLKRLRAFLLGNPSDAEIIEHTTQILDGLRKADTLDYAKRLSRGVVSAVNETNKERLIQNVQKGTDIDLTPLVGDTAVKAKLDEYIAKNVSLITSVKNDYLSDVEKAIRESYLKNGRAENLATIIHERTGVSKSRARLIARDQTAKINAELDQERMQNLGAKLYIWQTAKDERVRHTHANMQGVLCRFDDDSVYSKDGGKTWIKREADKPKCKPGVDIQCRCFAKAIIGV*	hallmark_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0030	cloud	direct	high	824	0.999	GCA_003116505.1_01759
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	111174	112409	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	19344	20579	GCA_003116505_1_28_130	GCA_003116505_1_28_130	-	146063	.	PDB:8HDS_J	Portal-Protein	MGQKITDSLENLVTKMGQMTANRDYTPLLVTNTQLLNAYNNGWIAKRYIKKTIGDMLKMGREIDWGEIDEERKKEFFNACGKLEIEGVIKDLLFNVLLYGEAAVLAVTDAGEESYQLPLMPNETIKQFIVFGKGEFKARNAEHKFNRPSLYDVKGVKTHVSRLCIVQGGIKSYGVKQRESISDIATALDVIKMFDTITLSVSDLIEECKIDVYKMHGYNEQIATGNEGEILKRLRLINEAKSYTNAIAMDMEDDYLTKENNLTGIAELWSKSCIVVAGALNRPISILFGEGAGGFSSGEEDNRAYYETINELQNTLLRPVYDFTDPFILGETLEYDFYSIDSLNDKEKAEILNVKSTALGNLLDKGVITEAIILKELKDEGLIKNISAEDITEAELLAQKLDEPADETDLI*	hallmark_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0031	cloud	direct	high	1235	0.999	GCA_003116505.1_01760
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	112455	113675	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	20625	21845	GCA_003116505_1_28_131	GCA_003116505_1_28_131	-	146063	.	PDB:5OE8_A	Large-Terminase	MIINLNTAPIFEPLLENKRYKGVKGGRGSGKSHFFAECIIETMLINPDARIVCIREIQRSLKFSSKALIESKINSLRVSEYFEITLTEIRAKRGNGVIIFQGMQDHTADSIKSLEGFDVAWVEEAQNLSKRSLELLRPTIRKENSELWFSWNPENETDAVDSFFKQMQENGATDFILVTANFSDNPFLPTELFNEQEYDRRYNPSTYEHIWLGGYNTKSDAQIFKGKFRVENFSTDGLGNPYHGLDFGFANDPTAAIRCYIHDRKLYISHEAGAVGLELDYTAEFLKDRIEDIHKYVIRADNARPESISYLKRHGLSMITPTIKGKGSIEDGIEFIRSFEAIIIHERCVETAREFRLYSYKTDPHSGDILPQILDENNHYIDALRYALEPLIKSKTTIWGHITSRN*	hallmark_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0032	cloud	direct	high	1220	0.999	GCA_003116505.1_01761
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	113672	114181	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	21842	22351	GCA_003116505_1_28_132	GCA_003116505_1_28_132	-	146063	.	PFAM:PF10654.8	DNA-binding-protein	MAKPLPPYKWDEIKADYEAGMSQAELRKKYNIPAGTLGNKIKRDNWQLSQTQKAALDEFKEASGKVCESLSQANETQKKEMAQQISATLENLEIIANNRKIAKAFQSLIVRGISDKRYATPTEIKQGTSALKDLEAIANPQSNKIEITNTNAQQTEVTEIRRTIVKLDK*	phrogs_hmm	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0033	cloud	direct	high	509	0.998	GCA_003116505.1_01762
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	114174	114923	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	22344	23093	GCA_003116505_1_28_133	GCA_003116505_1_28_133	-	146063	.	PDB:5HFJ_C	Adenine-specific-DNA-methyltransferase	MIWTDPPYNVAIENKAGKILNDDMGKKEFRAFLLTVFKNYCQIAKKGCVIYVAHSESERSAFTDTLVEGGFKFAQNLIWNKNQANLSRQDYNWKHEPILYGWKEGNGHYFCGDFTQTTVQEKKLNFSSMKKEELIEYIHKITEKQNTTVVDFDKPTKSELHPTMKPIGLVEHFIQNSSREKELVVDLFGGAGSTLIASINTNRTCYLMELDEKYAQVIVQRYVDYTNNPKIKINGKEVDWYEYKEAVNG*	common_virus_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0034	cloud	direct	high	749	0.999	GCA_003116505.1_01763
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	114920	115501	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	23090	23671	GCA_003116505_1_28_134	GCA_003116505_1_28_134	-	146063	.	CDD:cd16403	ParB-like-protein	MEIKYKKIGELTPYINNARTHSDEQVDQIVASIKEFGFTNPLLIDEKGEIIAGHGRLAAAKKLNMGEVPTIELKGLSEAQKRAYVIADNKLALNAGWDEELLKAELEALQGQGYDLELTGFSEDELKTMGLSDEIDEYMAIDKSKEDEIPEVDDEKIIIQQGDLIEFGKHRLLCGDSTNKKDVEKLMGGVQRI*	common_virus_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0035	cloud	direct	high	581	0.998	GCA_003116505.1_01764
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	115510	115869	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	23680	24039	GCA_003116505_1_28_135	GCA_003116505_1_28_135	-	146063	.	.	hypothetical protein	MDLPNLKHLDVFYAVLDKFYPDWENRDDHYYLTEISFLIREVLNSPYTDETVINNLRVSEVKKYQAELNTLLNTPKEFLDWVLKHRMTASRRKMCQSKYLSTKPKRKYKKKKYQQLTLF*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0036	cloud	direct	high	359	0.997	GCA_003116505.1_01765
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	115874	116254	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	24044	24424	GCA_003116505_1_28_136	GCA_003116505_1_28_136	-	146063	.	PFAM:PF06356.10	Endonuclease	MRIGNVSVIARSKYHNKKTKGFDSAKEWRRNQELETLQRAGEISELNRQVPFTLMPSYTIADETTKQGFRTVREIRYIADFTYRLKNGKRIIEDVKGMQTEVFKIKRKLLERKIALGVIEGEFRIY*	common_virus_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0037	cloud	direct	high	380	0.997	GCA_003116505.1_01766
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	116223	116483	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	24393	24653	GCA_003116505_1_28_137	GCA_003116505_1_28_137	-	146063	.	KOG4768	KOG4768, Mitochondrial mRNA maturase [RNA processing and modification]	MRLTRSENKAYQLRLLEAYPLCQICEEQQSIECHHVRYGRFGAEKDDSKQIAVCRECHQWCHAHKHESIEKYEEVADENWQRFGDC*	mmseqs_cdd	nonviral_gene	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0038	cloud	direct	high	260	0.996	GCA_003116505.1_01767
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	116483	117406	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	24653	25576	GCA_003116505_1_28_138	GCA_003116505_1_28_138	-	146063	.	pfam02384	N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.	MNEYSVKAIREHFKANGIFYTPPELSKMLKEIVEKEVSDIKEVYDPTCGRGALLSVFGDDVVKYGQDINASEVEVAKNSLVNFNGVIGDTLKEPAFLDKKFKAIVANPPFSIPWDSESVFFDERFAGYALAPKSKADYAFNLHILHYLLDDGCAAVINFPGVLYRGNSEGKIRKALVEKNLINEVILIPGGYFDDTSVATCIIVYKKNKQDTNIIFTDKELNLSKSVSFEEVAKNDFNLSVSQYVYEEKVKPPFDAVATELQARADFIANMKKELGFSRLVCDFEGINFEEFPRQIIETAQSYIGEH*	mmseqs_cdd	nonviral_gene	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0039	cloud	direct	high	923	0.999	GCA_003116505.1_01768
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	117406	117588	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	25576	25758	GCA_003116505_1_28_139	GCA_003116505_1_28_139	-	146063	.	.	hypothetical protein	MKAVYITITENGANIIAKVADENKKILDSFEISRKDASGVLEVMRKWNEKHKDDKARGLF*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0040	shell	direct	high	182	0.995	GCA_003116505.1_01769
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	117585	118196	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	25755	26366	GCA_003116505_1_28_140	GCA_003116505_1_28_140	-	146063	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MKVLNLFAGLGGNRKYWDEVAREKGINIEVTAVEFDPEIAKAYTKRYPNDNVIVGDAWDYAAKNYLDFDFIWASPPCQTHSRLNIANNIRNDRTKRLPDFRLYELIVYLKYFCKKAFVVENVVPFYEPLIKPTAEIGRHYFWANFDLFFLHNSNFRIVTKTKIGDFMDLDLNEFKIKNKRQAIRNEVDYEIGKKIFERYLEQI*	common_virus_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0041	cloud	direct	high	611	0.998	GCA_003116505.1_01770
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	118196	118822	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	26366	26992	GCA_003116505_1_28_141	GCA_003116505_1_28_141	-	146063	.	PDB:1NO1_B	replisome-organizer	MTIQEFYGVFMPTVEYYGANLSKAVIALYFEDLMGYEASELAAALKLVRQTRKYPTMPTSAEILEALNGDEGDKAQKALDELAYAIRRYGPYRSVCFKDGAIMSVVRARGGWIKVCNLEGQDWENFKKWDFAKLYKIYAKTPQICPDYLIGESEANNSFNGVGGNEPVYFIGGANDGKFMGVAKFKALAEQKSPIKAILTGVIKRIGA*	rep_hall_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0042	cloud	direct	high	626	0.998	GCA_003116505.1_01771
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	118819	119661	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	26989	27831	GCA_003116505_1_28_142	GCA_003116505_1_28_142	-	146063	.	pfam13730	Helix-turn-helix domain. 	MSIRIMSQVWNMEIDDSTTKLTLMALADFSDDEGYCYPSYEVLAKKISKSKRTAIRAVEKLAELGFLQKEKRELNDGTSRTNLYKIVSENERVTQTPPMMTNEKEAVTSMTSHSDTDDTMVVTNVSLHSDKGVTPINITTNRTVSRTIKKPSINPLPPKDVSLPDFIDPTLWQEYLAYKKERREKLSSKGIEMKFSEWAKWDAEGIDVNECLREAMRNEWQGVFKPKPTYGAKATSGTQGVSDDNPHGLKQGTLNTMAAFRELAREMRKNGKSDLVGDFQ*	mmseqs_cdd	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0043	cloud	direct	high	842	0.999	GCA_003116505.1_01772
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	119741	120010	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	27911	28180	GCA_003116505_1_28_143	GCA_003116505_1_28_143	-	146063	.	7BZH_A	Sul7s	MIASNSLEAYNKLKPELSGKRRAVYEMFCQHKEGATRQEIARWYNVAINSVCGRVNELVERGYLIEIGSKKDVISGCSTSILKPTERIA*	hhsuite_tools	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0044	cloud	direct	high	269	0.996	GCA_003116505.1_01773
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	120014	120226	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	28184	28396	GCA_003116505_1_28_144	GCA_003116505_1_28_144	-	146063	.	.	hypothetical protein	MVTPKYDISKAFKLSNQNIANIVKIQNRKGFRNDSEVIRFCLDMVSVLIDKELETQVIAKLLENTANEKG*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0045	cloud	direct	high	212	0.995	GCA_003116505.1_01774
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	120213	120452	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	28383	28622	GCA_003116505_1_28_145	GCA_003116505_1_28_145	-	146063	.	PFAM:PF10078.8	transcriptional-regulator	MEKVKITQMAIAKKLGVTQGAVSEWFRCETKPTIENAILLKTHFGIPVEAWLDIASYVVNNSKRFGNLKILRKAHNGNA*	phrogs_hmm	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0046	cloud	direct	high	239	0.996	GCA_003116505.1_01775
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	120553	121335	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	28723	29505	GCA_003116505_1_28_146	GCA_003116505_1_28_146	+	146063	.	PDB:2FJR_A	Repressor-protein-CI	MDLSDKIRNARKKLGLTQVQLAEKLGVTQGTINQYETKAGEVDNKGKPKKTAKPSLEKIPELAEALDMDISEFFENSETLKKVIVKKELKNNFAKYSDLIPDENQLKNVVFLSKSEMRIGAGSEGVYDLAMLQNEERKVVVDRAFLKGLKPQNLCIFEVVGDSMEPDFYEGDWAIADMVAGRGDFVRIAGVYIVRVDDVVYIKRVEFLPQNKIKLISLNPKYSDMYPHKEGYECEILGKVCGKVHCEVYKGLTFEDYGIK*	common_virus_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0047	cloud	direct	high	782	0.999	GCA_003116505.1_01776
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	121367	121618	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	29537	29788	GCA_003116505_1_28_147	GCA_003116505_1_28_147	+	146063	.	.	hypothetical protein	MTEKEFKNKYNELVKNGYFFINHRATANSLGFNSLCAKFNLPIIKVTKIGKFYHNEYCDMYMFYSEDRLSYYEAEKIMDDNFK*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0048	cloud	direct	high	251	0.996	GCA_003116505.1_01777
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	121631	122479	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	29801	30649	GCA_003116505_1_28_148	GCA_003116505_1_28_148	+	146063	.	.	hypothetical protein	MDIKFYFYKVVGDIDKNLFGYSLEKYFSNGLSLQDGLIAINENKGFLDSVNGEKNIFIFQKFRKDFNPIIKDEVTGKTREIKLNETEYIIEQNYLFWDFENNIIIYQKTAGGFNTTAFETYIKELLKEKFKDDFFTLKPIISHNGYEKIINSNIIKAYDIALASPSIKVLQELGLDDKGILKIDDDNLGKVEIKITAKKGRGLFGVDTFKSLLGNKENYSKMRIKTSNSYLKSGVLIDLLDEFYTVSRSVRENKKRVAPEDMLVVIKDVYEKHIQEIMDLSR*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0049	cloud	direct	high	848	0.999	GCA_003116505.1_01778
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	122476	122832	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	30646	31002	GCA_003116505_1_28_149	GCA_003116505_1_28_149	+	146063	.	.	hypothetical protein	MIDVDFIYSNLDKLFTISFTMLAFVIAAITILQTISTGRIAEFRETGLIDSVIRRYNSSICWNFISGVVICLLWFIRPDFMGDTAKIVICAISFLLFLIAIFKTYDAYRFLIYFVKKQ*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0050	cloud	direct	high	356	0.997	GCA_003116505.1_01779
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	122907	123188	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	31077	31358	GCA_003116505_1_28_150	GCA_003116505_1_28_150	-	146063	.	COG3668	Plasmid stabilization system protein ParE [Mobilome: prophages, transposons]. 	MVIKYKPKFERELKIIFDFIAKDSLSRAREFRNELIAKIERTAQTPFICRKSINFNDESIRDLIFKGYVIPYLIDDEVIYILGIYKANEWEAS*	mmseqs_cdd	nonviral_gene	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0051	shell	direct	high	281	0.996	GCA_003116505.1_01780
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	123182	123478	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	31352	31648	GCA_003116505_1_28_151	GCA_003116505_1_28_151	-	146063	.	.	hypothetical protein	MQTLTIQADEALISQIVAISKALANTTNQKLIIDDGYADELNARADEALQGKGLIDEAKARKNLEAIKAEILSDVEAIRRGELKTISHDELKARIMQW*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0052	cloud	direct	high	296	0.997	GCA_003116505.1_01781
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	123563	124624	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	31733	32794	GCA_003116505_1_28_152	GCA_003116505_1_28_152	-	146063	.	PFAM:PF13588.5	endonuclease	MEELKLKIKEIAANIEKLGASITTEEATKNAFIMPFIRALGYDVFNPLEVMPEYTQDIGTKQGERIDYAIFQNNEPVLLVECKKIGAELNAKNESQLLRYFNVSKAKFAILTNGREYKFFTDLEEKNMMDTAPFLSFDITKIKDTQLMELVKFHKKNFDLENIFNTANNLKYTNQLDKIVAAELENPSREFAAFFFKKISDQVATEKRIDQITPLLKAVFAQRINDMVRDRLTSALDKETKKEAEPLPQQEDENKIITTQEELDAFYIVRAILAAVTNVENITHRDAQSYFAIFFNDNNRKPICRLYFTDNKKQLGIMDSEKNETRFQLNRIEDIYAYSEKLCEVAKFYANQN*	phrogs_hmm	nonviral_gene	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0053	cloud	direct	high	1061	0.999	GCA_003116505.1_01782
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	124951	125349	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	33121	33519	GCA_003116505_1_28_153	GCA_003116505_1_28_153	+	146063	.	.	hypothetical protein	MKNIELFDYYAGIIFSELIDEFPLPKDIKAADIVKNDIHIDEVNKHVAIVYYTCLWLKENGFVNLDNSFSSQKMVSNVILTAKGLEILKQTPQSIDGKSLGDNLKAAVQTGKDEFIKQAVNKIFSLSLNLIS*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0054	cloud	direct	high	398	0.997	GCA_003116505.1_01783
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	125511	125747	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	33681	33917	GCA_003116505_1_28_154	GCA_003116505_1_28_154	+	146063	.	.	hypothetical protein	MRNKQKYLKVTFDGCTRYSTREPNFYTYEVYFDTLGLVLYIHKDALMLLAVKDKKLNPVKLSKKQLASFKAEYVYEIA*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0055	cloud	direct	high	236	0.996	GCA_003116505.1_01784
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	125757	125852	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	33927	34022	GCA_003116505_1_28_155	GCA_003116505_1_28_155	+	146063	.	.	hypothetical protein	MKKIIRFFRIVFSNGGEIKNIAYLNIKRSQK*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0056	cloud	direct	moderate	95	0.99	GCA_003116505.1_01785
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	125849	126196	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	34019	34366	GCA_003116505_1_28_156	GCA_003116505_1_28_156	+	146063	.	.	hypothetical protein	MSLSYDLARAESDVAHINLDKEYDELITDIEAVYSRHRYTFKNSLGENSGEIVDLLIEHCKKDFFAYAALVYVLCVEAEMSNDAVLSYTTTYKQTLKKLREEAEKDALLYSDEAC*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0057	cloud	direct	high	347	0.997	GCA_003116505.1_01786
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	126165	126266	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	34335	34436	GCA_003116505_1_28_157	GCA_003116505_1_28_157	+	146063	.	.	hypothetical protein	MRSYILMRLVEFYYEPGMTWGEFQKILERIKNG*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0058	cloud	direct	high	101	0.99	GCA_003116505.1_01787
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	126259	126873	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	34429	35043	GCA_003116505_1_28_158	GCA_003116505_1_28_158	+	146063	.	pfam04404	ERF superfamily. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to ERF.	MDKEVIELLNKVQTELKAPKAQENKFGGYKYRSCEDILEALKELEAKHNFCTLLSDEIMLVANRIYVKATAKFVCDKGEISVSAYAREAEAKKGMDEAQITGSASSYARKYALNGLFAIDDTKDADATNMHADEPKVEQKGKGAYMTPEQLSDLTQLCEVTNSDIEKLTAYYKVKSFSQVPYVKAKAALLAKLEKMKAESKKTA*	mmseqs_cdd	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0059	cloud	direct	high	614	0.998	GCA_003116505.1_01788
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	126985	127836	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	35155	36006	GCA_003116505_1_28_159	GCA_003116505_1_28_159	+	146063	.	.	hypothetical protein	MDASYELHFDFNADGGADFFKNVSTFITNLDELNVAICSYIDSEITTHVILESVENGSLKAKVKDILKNIDSDKIRSYVKDPRDAIADFLIKVKDKLIELLEDDPKQLPYRADEIVCEIIEDSELKNYGYKHNKTTLLRAMSNLSQSTKGFKMPPRINLKGKEREVKSGYEFSADDLDGAIEQKSEFKGAFIIKKPDLAGASKWTIINGAAIDVKIIDEAWLKKLKSHEIALRYGDKIAGTLISKSVIDADLNVVSTDYYLDDILGIEASKNAEQQILDIKEQ*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0060	cloud	direct	high	851	0.999	GCA_003116505.1_01789
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	127836	128714	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	36006	36884	GCA_003116505_1_28_160	GCA_003116505_1_28_160	+	146063	.	pfam10546	P63C domain. This domain was identified by Iyer and colleagues.	MAEKTLKSLADGILKIGDVELDVSVLEDGARVIGHNAVFRALGREPRGNSRQDQTPAFMDAKNLQSLISSDLEAMIKRVVYLDRNGKEKEGFNADILPLVADLYLKARDANVLVATQIDTAKKAEMLIRSLARVGITALVDEATGYQYERERDELQKILKAYISEELLKWEKRFPDDFYKEIFRLNGWDFTVNGIKKRPSVIGRWTNTLIYNELPDGVLQELKENTPKHARYHQRLTPDIGQPNLTAQIYKVIGIMQSSDNMQEMWERFKKIKAREQDEGVEFDEKGRLKDL*	mmseqs_cdd	nonviral_gene	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0061	cloud	direct	high	878	0.999	GCA_003116505.1_01790
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	128714	129097	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	36884	37267	GCA_003116505_1_28_161	GCA_003116505_1_28_161	+	146063	.	PFAM:PF10078.8	transcriptional-regulator	MADEIEKTMLDTLEKEASIGKIKADLEEAKANRAYNSYKKRQKQDQDLQEAMDDNIVKRVCKELGITQRELAERIGVSQGMPAKWAMEATPPPQWAIVSMNLLLENERMKAKLEKLKDFQSLILGEL*	phrogs_hmm	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0062	cloud	direct	high	383	0.997	GCA_003116505.1_01791
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	129243	129950	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	37413	38120	GCA_003116505_1_28_162	GCA_003116505_1_28_162	+	146063	.	PFAM:PF10547.8	anti-repressor-Ant	MQELSFFTNSQVEILNFQNFAAEYVAEHYGVSEKTILAHKARHADEIVENIHFIYELADTKGGRQEVLKWTLRGIIKLGMFIRSKEAKYFRLWAEQELEKTILSELAQAKETRQKNLSLVSQVSSLNALLIDNAKRHRREINGYKSQLKQHNEKIVVLKHELEKASNPRPSDPIYAQIKAERDYYKERYKKLSQSKDETIILNLAKIQKELEKSYTAIGAVMAYADGDDYFIKKG*	phrogs_hmm	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0063	cloud	direct	high	707	0.999	GCA_003116505.1_01792
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	129954	130784	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	38124	38954	GCA_003116505_1_28_163	GCA_003116505_1_28_163	+	146063	.	PDB:3SZ4_A	Exonuclease	MFINLEQNTPEWLEYRRTKFNASEAGDVMGVGFNKPYVLAQIKKGQKAVFENQAMKNGKNYEPDLRAWLNKTMHYDFIPVVMQSDKDTRFSASLDGLDIMADTICEIKFSDAEYKQVKECGVPSKKYYYQVQHQLYVSEAKKCIFAVGHLNDDFELEAVTCEILPNKKAINELKNAWNAFEAQYLQDDEANNEWLELASELSELNAQKSELEAKIAELKAKAIEKADGREQAHFGLSVYKINRKAQPDYKGYCEHMGYDVPSEFIRPESSSWAVRV*	common_virus_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0064	cloud	direct	high	830	0.999	GCA_003116505.1_01793
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	130781	131110	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	38951	39280	GCA_003116505_1_28_164	GCA_003116505_1_28_164	+	146063	.	.	hypothetical protein	MRIRNEFSRFMHGVVLKELWALRYLEIRELHVAIRPFYLAFDTLKQVLKRLDTDYPKDKEGKPLSYTKLNNEEVLSHIAFIERLMSENHHEANYLKEMKQPNCQIKVDS*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0065	cloud	direct	high	329	0.997	GCA_003116505.1_01794
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	131138	131605	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	39308	39775	GCA_003116505_1_28_165	GCA_003116505_1_28_165	+	146063	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MNKIIMIGHLARDIELRYTQSQMAIGKTAIAVTRKYTLNGEKREETCFIDLTFFGKQAEIANQYLGKGSKLAVEGYLKFEQWQDNNGQNRSKHSIAVESMEMLGDAKQNNQGYQQGGYSNQRPQQQKPPQRQQHSEPRYPEYDSDEIDDTDEIPF*	common_virus_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0066	cloud	direct	high	467	0.998	GCA_003116505.1_01795
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	131615	131860	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	39785	40030	GCA_003116505_1_28_166	GCA_003116505_1_28_166	+	146063	.	.	hypothetical protein	MTYGEAIMSAKDKMKLVKGTFKIGVPLPQRLNYENAMKYYCEKLDRYWLSKIELSPASKFSKQEVLQILKGKNLNGVSDDN*	.	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0067	cloud	direct	high	245	0.996	GCA_003116505.1_01796
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	132127	132309	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	40297	40479	GCA_003116505_1_28_167	GCA_003116505_1_28_167	+	146063	.	PFAM:PF10013.8	excisionase-and-transcriptional-regulator	MSDTFITRDEALKELGISARSLYDKVKQGAIIANKINSRVIYYSLKSIRAYKSGKATQAI*	phrogs_hmm	hypothetical_protein	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0068	cloud	direct	high	182	0.995	GCA_003116505.1_01798
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	132283	133473	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	40453	41643	GCA_003116505_1_28_168	GCA_003116505_1_28_168	-	146063	.	PDB:1Z19_B	Integrase	MPKLSRQLTITQFKNLKAKEKPYFVSDGDNLLIKIMPNGTKFFMYEFREGGKRHRLTLGKYDEISLSEARDKRSELRSKLNQGESLTQTAEKTKFKAVFEAWHKTKGKLSEKQQFWIKRRFETLLLPKLGEMNIKGISRKDIIFAISPLLEDEKLETADRVLSILSGFFKYALLHEYVDHNIIADIDKKTLLGRREVKHFAYLKNNDEIRAVLMAIRDYFGDIRVKTCAIFQLYTAVRGQNARNAKWSQIDFENCLWHIPADEMKMAKPHEVFLSKSVINLLKTYRERLPLKSELIFPSIKSNVAPLSDNTIRIMLRNLGFNKDMVTPHGFRATFSTVANENIDKHGCNSDVIELCLAHVESNKVKDAYNHAKNLKARAKLMQWWSDYLDSLGGFA*	common_virus_hmm	common_virus	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0069	cloud	direct	high	1190	0.999	GCA_003116505.1_01799
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	CDS	133813	134208	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	41983	42378	GCA_003116505_1_28_169	GCA_003116505_1_28_169	-	146063	.	NF040502	phosphinothricin N-acetyltransferase. Phosphinothricin N-acetyltransferase (PAT) provides resistance to producers of the natural product phosphinothricin, non-proteinogenic amino acid antibiotic.	MLPVSTKEREPWFNAHGDSRPIFIYKENDEILGYCSLSDFSPKIAYDISVEISIYVAKKALKKGIGKQLLAHSLNEARELNLKNIIALIFSKNKASLGLFLKFGFEKWGELPGVCLMDGEYKDVVILGLKL*	mmseqs_cdd	nonviral_gene	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_CDS_0070	persistent	direct	high	395	0.997	GCA_003116505.1_01801
GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote	cenote	tRNA	133685	133769	GCA_003116505.1	PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505.1_PIRT01000006.1	GCA_003116505.1|PIRT01000006.1	GCA_003116505_1_28	GCA_003116505_1_28@C9	41855	41939	tRNA-Ser	tRNA-Ser	-	146063	.	tRNAscan-SE score: 65.8	Ser	NA	tRNAscan-SE	.	C9	42378	91831	134209	GCA_003116505.1|PIRT01000006.1@region_91832_134209@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	tRNA	122320	122394	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	627	701	tRNA-Gln	tRNA-Gln	+	347576	.	tRNAscan-SE score: 52.9	Gln	NA	tRNAscan-SE	.	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	tRNA	122422	122496	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	729	803	tRNA-Met	tRNA-Met	+	347576	.	tRNAscan-SE score: 74.7	Met	NA	tRNAscan-SE	.	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote	cenote	tRNA	140169	140255	GCA_003116505.1	PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505.1_PIRT01000001.1	GCA_003116505.1|PIRT01000001.1	GCA_003116505_1_11	GCA_003116505_1_11@C11	18476	18562	tRNA-Leu	tRNA-Leu	+	347576	.	tRNAscan-SE score: 68.0	Leu	NA	tRNAscan-SE	.	C11	20388	121694	142082	GCA_003116505.1|PIRT01000001.1@region_121695_142082@tool_cenote_tRNA_0003	.	.	.	.	.	.