core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	321470	322657	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	1	1188	GCA_003129975_1_11_273	GCA_003129975_1_11_273	+	333181	.	CDD:COG4653	Major-Capsid-protein	MFKKLLELRQQKAEKVAAMRAMLDKAEQENRSLTETENVDFEKLKDLVKQLSDEIARYETVADEERNIADKGKPVETRGKTFSNDELRHYIKTGELRNLSTTGQEDGGYTVIPQLDKDVMKRLTDDSVMRQICNVVRLPVGAKEYKKLVSAGGAVVAHGEEGQARNGTATPKLHEVTIALNPIYAYPKTTQEILDFSSIDVLGWLTDEISESFTETEETDLTDGDGTKKSKGFLSYERSTEADKVRAFGKLQKLDVAGADKITADTLIDLFYTLHSKYRKNAVWVMSSTIAAALQKLKNKNGDFIWRDGLTVDAPSTLLGRPVYFLETMPASGANKPVVAFGDFKRGYFIVDHETGVRTRPDNITEPGFYKVHTDKYLGGGVVDSNAIKFIEVTA*	hallmark_hmm	common_virus	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0001	persistent	direct	high	1187	0.999	GCA_003129975.1_01050
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	322711	323277	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	1242	1808	GCA_003129975_1_11_274	GCA_003129975_1_11_274	+	333181	.	CDD:COG3740	head-maturation-protease	MNKEFEIRSSEITADSENKKLVGYVVKWNSPSEVLYCDFVEQFSANAFSESLSSGADVRALFEHDHTKLLGRTRAGTLKLEEDAIGLRFELMPPDTTLGRDLLVSVERGDISGMSFGFWAKEETWNFDVEPCQRTVAKAELFEITVTSIPAYPESSVEIAKRSMATAKGKTQRKSTALLKQWLDVAEA*	hallmark_hmm	common_virus	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0002	persistent	direct	high	566	0.998	GCA_003129975.1_01051
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	323279	324511	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	1810	3042	GCA_003129975_1_11_275	GCA_003129975_1_11_275	+	333181	.	CDD:COG4695	Portal-protein	MWNPFRRKEQRSAPMAINELLSYLGVSNTGAGEFVSPNTAESLPAVMSAVTVISEAVASMPCYLYQLKDDGRERVYRHPVDYLLNEMPNRSQTPYQFKYTMMRHCLLNGNAYAVIEWNNKGEPISLTPYEPSAVNIYRKVGGEYIYQITDLDGNTKNYLQDEILHLRHSSLDGFMGRSPITICRETVGLGIAQQKHGSAMMKNGLMASGLITTAEWLDEAKAQKAVKALERYKGAKNAGKTPILEGSMEYKQLGMTNQDAEWLASRTFTISDIARIYNISPIFLQDYSNSSYSNFSEASRAFLSQTLRPWLTNFEQQLKDALMIDLGSNSKKRYLIEFDTSDLLRTSQSERFKSYDVAIKAGVMCPNEVRRREGLSPYEGGEEFSQAWKQTVEVKRGDEQESGVSDGNHD*	hallmark_hmm	common_virus	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0003	persistent	direct	high	1232	0.999	GCA_003129975.1_01052
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	324495	324839	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	3026	3370	GCA_003129975_1_11_276	GCA_003129975_1_11_276	+	333181	.	PDB:2KZ4_A	Head-tail-adaptor	MAIMIKAGKYNKVISLQKQVNEQNDYGGIVSKWKTVANIRAAVEPLQGREFFSGAVPLNENTVRIRIRYGTNVDNTMRVKYGNRSLEIINIIDSKEAHKELQLICKELTGNGGN*	hallmark_hmm	common_virus	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0004	shell	direct	high	344	0.997	GCA_003129975.1_01053
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	324826	325140	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	3357	3671	GCA_003129975_1_11_277	GCA_003129975_1_11_277	+	333181	.	CDD:TIGR01560	uncharacterized-phage-protein-(possible-DNA-packaging)	MAEINLTIDEIKAHLNLDHDLDDELLEAYKVAALEVCQKHIGKTFGEEETEKTIPFTPAIKIGCLMYIAYLYTNREAVTDLANLKPAPMTISALWEVYREPCAY*	hallmark_hmm	common_virus	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0005	persistent	direct	high	314	0.997	GCA_003129975.1_01054
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	325155	325517	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	3686	4048	GCA_003129975_1_11_278	GCA_003129975_1_11_278	+	333181	.	PDB:5H0M_A	HNH-endonuclease	MPYQPLRRCSYPECRNKVKSGRCEEHKPKDNRPNSSARGYDHKWSKYREQYLKHHPLCVMCLEQGKYTPATVIDHIKPVENGQADPLFWVASNHQPLCRDCHSYKTRVIDQRGFGAKKID*	common_virus_hmm	common_virus	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0006	shell	direct	high	362	0.997	GCA_003129975.1_01055
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	325619	325987	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	4150	4518	GCA_003129975_1_11_279	GCA_003129975_1_11_279	+	333181	.	CDD:COG3747	Small-Terminase	MSKRRNYKTPDFLDGIAKTQWKSRIKQLSERGDIKAEDLTNLEIYCENYAIWRHSVADLAKNGFIIVNSQGTQSRNPALSAKADAEKVMIKMSSLLGFDPVSRRKNPIEVDENDILDEILTM*	hallmark_hmm	common_virus	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0007	persistent	direct	high	368	0.997	GCA_003129975.1_01056
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	325995	327662	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	4526	6193	GCA_003129975_1_11_280	GCA_003129975_1_11_280	+	333181	.	CDD:COG4626	Large-Terminase	MEIWQAYAEKIKSGELVACKKIKQAVERYFNDLNNPDYFFDKSAVDKFLAFSKLCPHVKGHLRGQPIILSDWQVFLFANILGFKRKDTGLRKYRSAYVQVARKNAKSTIAAVLANWFLVMEGGQQDIYTAAVSRDQARIVFDDARQMCLLSAPLKKRLNIQQHKLINPKNNSIMRPLAAKSSTIEGTNPSLAIVDEYHLHADNSVYSALELGQGARPEGLLFAITTAGSNVISACKQHYDYCAQILEGNEQNESLFVLIFELDEENEIDNQENWIKANPNIGKSIPYLDFENTIKKARGIPSEWVEMLTKRFNVWCQGSTPWLGDGNWAQCERQYTESDLLHQDCYLGLDLSSTNDLTSLCYTFPHGNKVRLLTRHYIPEFQLNNVANKNRAMYRNWVRSGWLIATEGDCIDYDKIRDDILKDAERFNIKMTGFDVWNATHLRTQLQAAGLEVEPFPQTYQRFSPVAKSAEVLINRQMIEHNGDPVLAWALSNVVMETDANANIKPNKKKAANKIDPAVAFLMSFGTYQLEYGDLIFELSDEHKHALEQFNGIDL*	hallmark_hmm	common_virus	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0008	persistent	direct	high	1667	0.999	GCA_003129975.1_01057
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	327659	327943	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	6190	6474	GCA_003129975_1_11_281	GCA_003129975_1_11_281	+	333181	.	.	hypothetical protein	MRCKQAKQNLLLSAVNHYKKSTALFTFVSLYDDEEPYPISEVIHALKCKCNAAKREIDSRPNSPNMDALETIYFIAKKQLDTMLKQQKRINAGK*	.	hypothetical_protein	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0009	shell	direct	high	284	0.996	GCA_003129975.1_01058
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	328038	328406	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	6569	6937	GCA_003129975_1_11_282	GCA_003129975_1_11_282	+	333181	.	PFAM:PF16082.4	holin	MGLILVTIKCMVAAFFVVLAIVTFQDWWFIVAFGLAGGLSFTIGWLIYDEYKRRKENKRLVDEREKRKNSWVEHEINRPIIQKTLQKQKENKPLITGTINWIDGSTGKETTLIDISVDIKNK*	phrogs_hmm	hypothetical_protein	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0010	shell	direct	high	368	0.997	GCA_003129975.1_01059
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	328501	329547	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	7032	8078	GCA_003129975_1_11_283	GCA_003129975_1_11_283	+	333181	.	.	hypothetical protein	MKISLPKKNSYSLEELPSFLSKTYNLDIVHDDLITYAREGKLKTCIRLEGNTKGVYAIGRIKMNEEDYLQIHTPPTTIFFNSTAKKFFLPHDLHLEDDNVYFGARLPMLDYFYQQVKDGNRDYNNIVSKIKTNINEFIESSKSLPEYEYQLLLRPKEFNYIFSADFYLPQAIYNTNTKLLKEHIIPINFSDDNFYLLENTNIKTILINLALKLSSAPTLAIHFKQIEVLHSDLMAFLGISDKSQENYSDILQEIERLKSELEEKDKKITELQTALDKMNYPIQLNKFMENDRLALAIQARKEYWANYDPNLNNAPKAEATAKEIQEKYNLSQKQATAIEIVACPINRN*	.	hypothetical_protein	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0011	shell	direct	high	1046	0.999	GCA_003129975.1_01061
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	329704	329907	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	8235	8438	GCA_003129975_1_11_284	GCA_003129975_1_11_284	+	333181	.	COG3311	Predicted DNA-binding transcriptional regulator AlpA [Transcription, Mobilome: prophages, transposons]. 	MSQSQTQSKKLITGADVCQRVSFGRTKLNELVKAKQFPQPIRFSQNFVRWDLEEVNAWIEEQKAARA*	mmseqs_cdd	nonviral_gene	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0012	persistent	direct	high	203	0.995	GCA_003129975.1_01062
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	329919	330230	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	8450	8761	GCA_003129975_1_11_285	GCA_003129975_1_11_285	+	333181	.	.	hypothetical protein	MNEARKPTQFLKVLHRLILSSISGIDGYSMGMTSARNYISELERNHLIGKVKRTTEKTADGMGQYYRYEIADAEQLKQVIAIYKAKGGELTAHEEQQAYFRFR*	.	hypothetical_protein	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0013	persistent	direct	high	311	0.997	GCA_003129975.1_01063
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	330429	331028	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	8960	9559	GCA_003129975_1_11_286	GCA_003129975_1_11_286	+	333181	.	NF033153	"host cell division inhibitor Icd domain. Icd from temperate phage P1 inhibits cell division in its host. Homologous sequence is found in many other proteins, often as the C-terminal region of what appears to be a much larger protein. Putative phage proteins that contain this domain may be designated ""host cell division inhibitor Icd-like protein"". See PMID: 8491703 for a description of Icd. Many proteins with this domain also have the Ash domain described by pfam10554, which also occurs in phage."	MNLNHVNYKQYENNYNTFYFTKCSQICDYVHALAKSKVSRGKLNYLHQANDSTPFNRAFFVRNIRTPQEFADFVLFNLKIHSMVERNRQSLTGCPPDVAVFHPVMLYRPTVESLAVDSENQHQESTQMYQFIFAAIRRTDLSNQIQKIRITADTEQAARAQFARDFVLVLTGKINLQNTVKNDRTFAAISRDSMEVAHA*	mmseqs_cdd	nonviral_gene	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0014	persistent	direct	high	599	0.998	GCA_003129975.1_01064
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	331021	331203	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	9552	9734	GCA_003129975_1_11_287	GCA_003129975_1_11_287	+	333181	.	.	hypothetical protein	MRNEEITKALEGLWEAQAISELISKGDGTIDKVECATYEAAFRAVSKLILTSVMSLEEEL*	.	hypothetical_protein	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0015	persistent	direct	high	182	0.995	GCA_003129975.1_01066
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	331218	331409	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	9749	9940	GCA_003129975_1_11_288	GCA_003129975_1_11_288	+	333181	.	.	hypothetical protein	MKKLDAMDEITKNLAQAEAILLMVDNNTREKALSDSLWAVRDLIVRTKDAVNVLWEGGNNESK*	.	hypothetical_protein	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0016	persistent	direct	high	191	0.995	GCA_003129975.1_01067
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	331396	331746	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	9927	10277	GCA_003129975_1_11_289	GCA_003129975_1_11_289	+	333181	.	.	hypothetical protein	MKVSNQYKGKLSFNPLHAEYAQISRQFKLIHDSNRKCLEVYPDDFHHKLKMRGECVDLVERLKGGGKLFNELAKAADLTKEQTAILKDFNQANGYLISKFAEVVTQIEQLQVVANA*	.	hypothetical_protein	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0017	shell	direct	high	350	0.997	GCA_003129975.1_01068
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	331739	331963	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	10270	10494	GCA_003129975_1_11_290	GCA_003129975_1_11_290	+	333181	.	.	hypothetical protein	MRKLKTKVSKKRPSLFEEERLPDWEQLVKAIKQTEFYLSFAKDYIHNGHLKGATDALKSIKRATTAGLKITGVK*	.	hypothetical_protein	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0018	persistent	direct	high	224	0.996	GCA_003129975.1_01069
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	331963	332406	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	10494	10937	GCA_003129975_1_11_291	GCA_003129975_1_11_291	+	333181	.	.	hypothetical protein	MDLNQKMDYSKLNAVELNAISISHQNMGKPKDEAFNSSFPYTTEAILALAEQFIDYPAEYLGGLKILRDELITINKHLLQMAPKPPSLAPEETAAMLSNDELIDGLLKHSLVNSLVSTFSYFQEVVAMRINIIENGAVEGVNHGTLN*	.	hypothetical_protein	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0019	persistent	direct	high	443	0.998	GCA_003129975.1_01070
GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote	cenote	CDS	332390	333178	GCA_003129975.1	NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975.1_NRCK01000002.1	GCA_003129975.1|NRCK01000002.1	GCA_003129975_1_11	GCA_003129975_1_11@C21	10921	11709	GCA_003129975_1_11_292	GCA_003129975_1_11_292	+	333181	.	PFAM:PF00145.16	DNA-primase	MARLINAPHLADQPKEPYSALIILAGRKAWQAWNKGKGEEWLLLCSLVEGIDAKQKPVILGEQQLEDISGIKIADSEQHTIMLFQCGELDQTEITGICHNLAKHTKADHVVLYDGAAQMKENLSGYIQRLRTDKSAVEIADKIAPPPKLKEKDGTNVKARAFVKWLNLDIAQHSLDKELYHYTGANWEILPRSELEVKAVQFYDEQEFTYSARSIDSMIDTAKIQAAKMGEQSKELLAFKNGVLNRSTLEFYPHCRENWLTSF	phrogs_hmm	hypothetical_protein	C21	11712	321470	333182	GCA_003129975.1|NRCK01000002.1@region_321471_333182@tool_cenote_CDS_0020	persistent	ambiguous	low	18	0.023	GCA_003129975.1_01070