core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	59132	60319	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	1	1188	GCA_003130075_1_9_56	GCA_003130075_1_9_56	+	410665	.	CDD:COG4653	Major-Capsid-protein	MFKKLLELRQQKAEKVAAMRAMLDKAEQENRSLTETENVDFEKLKDLVKQLSDEIARYETVADEERNIADKGKPVETRGKTFSNDELRHYIKTGELRNLSTTGQEDGGYTVIPQLDKDVMKRLTDDSVMRQICNVVRLPVGAKEYKKLVSAGGAVVAHGEEGQARNGTATPKLHEVTIALNPIYAYPKTTQEILDFSSIDVLGWLTDEISESFTETEETDLTGGDGTKKSKGFLSYERSTEADKVRAFGKLQKLDVAGADKITADTLIDLFYTLHSKYRKNAVWVMSSTIAAALQKLKNKNGDFIWRDGLTVDAPSTLLGRPVYFLETMPASGANKPVVAFGDFKRGYFIVDHETGVRTRPDNITEPGFYKVHTDKYLGGGVVDSNAIKFIEVTA*	hallmark_hmm	common_virus	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0001	shell	direct	high	1187	0.999	GCA_003130075.1_00146
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	60373	60939	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	1242	1808	GCA_003130075_1_9_57	GCA_003130075_1_9_57	+	410665	.	CDD:COG3740	head-maturation-protease	MNKEFEIRSSEITADSENKKLVGYVVKWDSPSEVLYCDFVEQFSANAFSESLSSGADVRALFEHDHSKLLGRTRAGTLKLEEDTIGLRFELMPPDTTLGRDLLVSVERGDISGMSFGFWAKEETWNFDVEPCQRTVAKAELFEITVTSIPAYPESSVEIAKRSMATAKGKTQGKSTALLKQWLDVAEA*	hallmark_hmm	common_virus	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0002	shell	direct	high	566	0.998	GCA_003130075.1_00147
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	60983	62173	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	1852	3042	GCA_003130075_1_9_58	GCA_003130075_1_9_58	+	410665	.	CDD:COG4695	Portal-protein	MAINELLSYLGVSNTGAGEFVSPNTAESLPAVMSAVTVISEAVVSMPCYLYQLKDDGRERVYRHPVDYLLNEMPNRSQTPYQFKYTMMRHCLLNGNAYAVIEWNSKGEPISLIPYEPSAVNIYRKVGGEYIYQITDLDGNSKNYLQDEILHLRHSSLDGFMGRSPITICRETVGLGIAQQKHGSAVMKNGLMASGLITTAEWLDDAKAQKAVKALERYKGAKNAGKTPILEGSMEYKQLGMTNQDAEWLASRTFTISDIARIYNISPIFLQDYSNSSYSNFSEASRAFLSQTLRPWLTNFEQQLKDALMIDLGSNSKKRYLIEFDTSDLLRTSQSERFKSYDVAIKAGVMCPNEVRRREGLPPYEGGEEFSQAWKQTVEVKRGDEQEPGASDGNHD*	hallmark_hmm	common_virus	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0003	shell	direct	high	1190	0.999	GCA_003130075.1_00148
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	62133	62513	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	3002	3382	GCA_003130075_1_9_59	GCA_003130075_1_9_59	+	410665	.	PDB:2KZ4_A	Head-tail-adaptor	MSKNRGQAMAIMIKAGKYNKVITLQKRDYDKERNSTPYGNSRPIWKNVATVRASVEPLQGREYFSGPFQMGENIIRVRIRYLEGITNKMRIKYGKRLFDIYSVIDSMESHRELQLMCKEGEAYGEY*	hallmark_hmm	common_virus	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0004	cloud	direct	moderate	356	0.934	GCA_003130075.1_00149
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	62500	62814	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	3369	3683	GCA_003130075_1_9_60	GCA_003130075_1_9_60	+	410665	.	CDD:TIGR01560	uncharacterized-phage-protein-(possible-DNA-packaging)	MANIDLTIDEIKAHLNLDHDLDDELLEAYKAATLEVCQKHIGKTFGEEETEKTIPFTPAIKIGCLMYIAYLYTNREAVTDLANLKPAPMTISALWEVYREPCAY*	hallmark_hmm	common_virus	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0005	shell	direct	high	314	0.997	GCA_003130075.1_00150
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	63394	63762	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	4263	4631	GCA_003130075_1_9_61	GCA_003130075_1_9_61	+	410665	.	CDD:COG3747	Small-Terminase	MGKRKSYKTPDFLDDIAKSQWKARIKQLSERGDIKSEDLTNLEIYCENYAIWRHSVADLAKNGFIIVNSQGTQSRNPALSAKADAEKVMIKMSALLGFDPVSRRKNPVETEDTDALDGILAM*	hallmark_hmm	common_virus	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0006	shell	direct	high	368	0.997	GCA_003130075.1_00151
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	63769	65436	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	4638	6305	GCA_003130075_1_9_62	GCA_003130075_1_9_62	+	410665	.	CDD:COG4626	Large-Terminase	MAIWNEYAEKVQSGEIMACRKIKQAVARYFDDLANPAYFFDESAVNKFLAFSRLCPHVKGHLRGQPIELSDWQTFLFANLLGFKRTDTGLRKYRSAYIQVARKNAKSTVAAVLANWFLLMESGQQDIYTAAVSRDQARIVFDDARQMCLLSPPLRKRLNIQQHKLINPKSNSLMRPLAAKSSTIEGTNPSLAIVDEYHLHTDNSVYSALELGQGARPEGLLFAITTAGSNVISACKQHYDYCAQILEGNEQNDSLFVLIFELDEESEIDNPKNWIKANPNIGKSIPYLDFENTIKKARGIPSEWVEMLTKRFNVWCQGTTPWLGEGNWAQCARDYTEKDLLHQDCYLGLDLSSTNDLTSLCYTFPQGKKVRLITRHYIPEFQLNNVANKNRAIYRNWVRQGWLIATEGDCIDYDKIRDDILKDAENFNIKVIGFDVWNATHLRTQLQAAGLEVEPFPQTYQRFSPVAKSAEVLINRQVIEHHGDPVLSWALSNVVMETDANANIKPNKKKAANKIDPAVAFLMSFGTYQLEYGDLIFELSEEHKQALEQFNGIDL*	hallmark_hmm	common_virus	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0007	shell	direct	high	1667	0.999	GCA_003130075.1_00152
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	65433	65720	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	6302	6589	GCA_003130075_1_9_63	GCA_003130075_1_9_63	+	410665	.	.	hypothetical protein	MRCKQAKQNLLLSAVNHYKKSTALFTFVSLYDDEEPYPISEVIHALKCKCNAAKREIDSRPNSPNIDALETIYFIAKKQLDAMLKQQKRINAGKR*	.	hypothetical_protein	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0008	cloud	direct	high	287	0.997	GCA_003130075.1_00153
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	65811	66182	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	6680	7051	GCA_003130075_1_9_64	GCA_003130075_1_9_64	+	410665	.	PFAM:PF16082.4	holin	MGLILVAIKCMVAAFFVVLAIVTFQDWWFIVAFGLAGGLSFTIGWLIYDEYKRRKENKRLVDEREKRKNSWVEHEINRPIIQKTLQKQKENKPFITGTINWIDGNTGKETTLSNISVTIKAKD*	phrogs_hmm	hypothetical_protein	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0009	cloud	direct	high	371	0.997	GCA_003130075.1_00154
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	66184	66369	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	7053	7238	GCA_003130075_1_9_65	GCA_003130075_1_9_65	+	410665	.	.	hypothetical protein	MENKEYLLSFFVIDNNGNEIDSGIISIDALDERDARTKSMIFLQKRYKGNRWEIESITLAK*	.	hypothetical_protein	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0010	cloud	direct	high	185	0.995	GCA_003130075.1_00155
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	66465	67277	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	7334	8146	GCA_003130075_1_9_66	GCA_003130075_1_9_66	+	410665	.	.	hypothetical protein	MLDLSSIQDDYLKEYLSLEHLRAFIYKSKLDKGKTKGINEENFYGVTCAQDVLALFKREEGRNNIPRCYLLHPITKSLDKVEYSHLISYLEYLVYTQIDTTSFRYNPDAMTAYEISCENESIKFDNKEFYFRRDEIENMIGAKIPHIENLSDVENVDLIPLQKEKAESVPELNQEIERLKSELEEKQKIIDSLSLTNQSGRISSPQKQLFALLVKKCYPKLDSRNKLFDVINADLKDSEIRNTDISADTFYKLIDESNDIIKAIFPPKKS*	.	hypothetical_protein	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0011	cloud	direct	high	812	0.999	GCA_003130075.1_00157
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	67464	67667	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	8333	8536	GCA_003130075_1_9_67	GCA_003130075_1_9_67	+	410665	.	COG3311	Predicted DNA-binding transcriptional regulator AlpA [Transcription, Mobilome: prophages, transposons]. 	MSQSQTQSKKLITGAEVTVMIGFGRTKLNELVRAKQFPQPIRFSQNFVRWDLEEVNAWIEEQKAARV*	mmseqs_cdd	nonviral_gene	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0012	shell	direct	high	203	0.995	GCA_003130075.1_00158
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	67679	67990	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	8548	8859	GCA_003130075_1_9_68	GCA_003130075_1_9_68	+	410665	.	.	hypothetical protein	MNEARKPTQFLKVLHRLILSSISGIDGYSMGMTSARNYISELERNHLTGKVKRTTEKTADGMGQYYRYEISDAEQLKQVIAIYKAKGGELTTHEEQQAYFRFR*	.	hypothetical_protein	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0013	shell	direct	high	311	0.997	GCA_003130075.1_00159
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	68189	68761	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	9058	9630	GCA_003130075_1_9_69	GCA_003130075_1_9_69	+	410665	.	NF033153	"host cell division inhibitor Icd domain. Icd from temperate phage P1 inhibits cell division in its host. Homologous sequence is found in many other proteins, often as the C-terminal region of what appears to be a much larger protein. Putative phage proteins that contain this domain may be designated ""host cell division inhibitor Icd-like protein"". See PMID: 8491703 for a description of Icd. Many proteins with this domain also have the Ash domain described by pfam10554, which also occurs in phage."	MNLNHVNYKQYENNYNAFHFTKCGQICDYVRALAKSKASREKLNYLQLANDSTPFNRAFFVRNIRTPKEYADFVFNLNPIILSMVERNGPSLTGCFPIVAVSHPVTFYRPTVRSLAVDSENLQLESTQMYQFIFAAIRRTDLTNHIQKIRITADTEQAARAQFARDFVLVLTGKINLQNAVKNDRTFIKG*	mmseqs_cdd	nonviral_gene	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0014	shell	direct	high	572	0.998	GCA_003130075.1_00160
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	68765	68986	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	9634	9855	GCA_003130075_1_9_70	GCA_003130075_1_9_70	+	410665	.	.	hypothetical protein	MRNLNKEKITLEKWQLEGLLEKVHQLSSLLLALSETDYSKLNECEIQAAIVAAFRVSESNYSALNKLLEGEDD*	.	hypothetical_protein	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0015	cloud	direct	high	221	0.995	GCA_003130075.1_00162
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	68979	69161	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	9848	10030	GCA_003130075_1_9_71	GCA_003130075_1_9_71	+	410665	.	.	hypothetical protein	MTNSPYKLVILDKQGKIDFVGHYPTYEQAYKAAEFLKNKDVHSEIRISNPDGLGEDDEND*	.	hypothetical_protein	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0016	cloud	direct	high	182	0.995	GCA_003130075.1_00163
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	69154	69537	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	10023	10406	GCA_003130075_1_9_72	GCA_003130075_1_9_72	+	410665	.	.	hypothetical protein	MIKPMAQQQTQGTVKPKIHGKLSFNPLHAEYAQISRQFKLIHDSNRKCLEVYPDDFHHKLKMRGECADLVERLKGGGKLFNELAKAADLTEEQTTLLKDFNQANGYLISKFSEVVTQIERLQVVANA*	.	hypothetical_protein	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0017	shell	direct	high	383	0.997	GCA_003130075.1_00164
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	69530	69754	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	10399	10623	GCA_003130075_1_9_73	GCA_003130075_1_9_73	+	410665	.	.	hypothetical protein	MRKLKTKVSKNRPSLFEEERLPDWEQLVKAIKQTEFYLSFAKDYIHNGHLKGATDALKSIKRATTAGLKITGVK*	.	hypothetical_protein	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0018	shell	direct	high	224	0.996	GCA_003130075.1_00165
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	69754	70197	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	10623	11066	GCA_003130075_1_9_74	GCA_003130075_1_9_74	+	410665	.	.	hypothetical protein	MDLNQKMDYSKLNAVELNAISISHQNMGKPKDEAFNSSFPYTTESILALAEQFIDYPAEYLGGLKIIHDELLAINKHLLAMAPKPPSLAPEETAAMLSNDELIDGLLKHCVVNSLVSAFSYFQKTVAMRIHIIEKGAVEGVNHGALN*	.	hypothetical_protein	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0019	shell	direct	high	443	0.998	GCA_003130075.1_00166
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	70181	71971	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	11050	12840	GCA_003130075_1_9_75	GCA_003130075_1_9_75	+	410665	.	PFAM:PF04735.11	DNA-helicase	MAHLINAPHLADQPKEPYSALIILAGRKAWQAWNKGKGEEWLLLCSLVEGMDARQKPVILAEQQLEDISGIRLADPEQRSIMIFQCGELEPTEITGICHNLAKHTKADHVVLYDGAAQMKENLSGYIQRLRTDKSAVEIADKIAPPPKLKEKDGTNVKARAFVKWLDLDIAQHSLDKELYHYTGANWEILPRSELEVKAVQFYDEQEFTYSARSIDSMIDTAKIQAAKMGEQSKELLAFKNGVLNRSTLEFSPHCRENWLTSFIPHDYTNQEENTPHFDNWLNFVADSKEDKKQAILGALYAILTNRHNWQLFFEVTGDGGSGKSVFAQIATMLAGEQNTESGRLVDLDEPRGRENFVNKTLILCPEQSRYGGDGGGLKSISAGDLVNIDPKHKSKFKAVIPAIVLIVNNEPTRFTERNGGIERRRVIFHFDKVVPESKRDPRLMDKIEAEAGGIIYKLIQAFKNPLDAKKALTKQQESAEALEIKMNSDHLTVFCSYFLTSQESNGLGIGNTKTGLPRTHLYPAYLVFTEVNNIQNALTLNNFTESLRQGLAQHKNKYPYTRRRITSGAEKGRYITNVHFKDFDEFYNEYIKSNR*	rep_hall_hmm	common_virus	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0020	shell	direct	high	1790	0.999	GCA_003130075.1_00167
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	72136	73332	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	13005	14201	GCA_003130075_1_9_76	GCA_003130075_1_9_76	-	410665	.	PDB:1Z19_B	Integrase	MPKITKPLTNTEVERSKPKAKEYTLTDGYGLFLLVLPTGVKSWRFNYIRPLTKKRTKVSLGTYPALSLAQARSIREEYRSLLAQGIDPQEHKEQEQKAAIEHIENSLLSVANRWKAKKVQKVEAETLKKDWRRMEIYLFPFIGDMPINEILPKVVIEALESLYNQGKGDTLKRTIRLLNEVLNFAVNYGLIAFNPCLRINEVFNFGKSTNNPAITPKELPELIKAVMYSSAAIQTKLLFKFQLLTMVRPAEASNATWSEIDFKKSLWTIPANRMKKRHPFVIPLSSQAMEILNKMKSISVKSEYVFQSWIKSNQPMSSQTINKMLVDLGYKNKQTAHGLRTIGRTYLADQRIDYEVAEMCISHKTGTQTGKIYDRADFLEQRKPVMQLWGDYVEQCER*	common_virus_hmm	common_virus	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0021	persistent	direct	high	1196	0.999	GCA_003130075.1_00168
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	73734	75599	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	14603	16468	GCA_003130075_1_9_77	GCA_003130075_1_9_77	-	410665	.	PDB:4XLN_L	DNA-directed-RNA-polymerase-subunit	MDQNPQSQLKLLIAQGKEQGYLTYAEVNDSLPEELVDADQIEDIIQMINDMGIQVLETAPDADDLMLNENITDEDVVEEATQVLSSVEAELGRTTDPVRMYMREMGSVELLTREGEIDIAKRIEEGINEVQSAIAAYPEAITNLIEQYDLVESGGVRLADLITGFVDPNVLSESETAELDEFHAEESEENVAAAEMDDESEDEEDSEESSSDDSDSDNSIDPEVAREKFTALRQQHQKTLEIIAKHGRTGKKAKDEIQALSDIFTQFRLVPKQFDTLVLSTRDMMKRVRHQERLIQRLVVDNAKMPKSSFQKSFIGHETSDVWLVKALAAGKSWSEKLVQYEDELRQAIAHLVQIEQDTNLTIPQIREIGERIAQGELKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREATPEELAERMGMPEDKIRKVLKIAKEPISMETPIGDDDDSHLGDFIEDSTLELPLDSATAQSLKAATHEVLEGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSETLRSFLDE*	common_virus_hmm	common_virus	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0022	persistent	direct	high	1865	0.999	GCA_003130075.1_00170
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	75675	77435	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	16544	18304	GCA_003130075_1_9_78	GCA_003130075_1_9_78	-	410665	.	PDB:5IKN_F	DNA-polymerase	MKGSIPRTFIDDILTKINIVDLINSRVKLKKAGRDYQACCPFHHEKTPSFTVSDKKQFYHCFGCGAHGNAISFLMEYDKLEFVEAVEELAGFLGLEIPYEKRPHFNDNGKRVGYQTKRNLYELMQEIAKFYQQQLPLNIPAQSYLQQRGLSAEIIERFQIGYVPNAMDTVYRQFGKTREEQQKLFDLGMLSRNDRGNVYDKFRNRIMFPIRDRRGRTVAFGGRVLTDEKPKYLNSPETVTYHKGSELYGLFEALQADDSPQKLLVVEGYMDVVALAQFGVNYAVASLGTSTTSEQIQLLFRSTEQVICCYDGDRAGRDAAWRALENALPYMEDGRQLKFIFLPDDEDPDSFIRQYGKQGFEEYIEKAQSLSEFLFAHLTPKVDFSSKESKTKLAALGIPLIEKIPSKALRMELRHLFAKKLAIVDPAQLESLLPEKLQTDNTPITQKIQFKRTPMRILIALLLQNPELVKFVPDLEPLKNLDEPGYDLLVELTALCREKVGISAGLLLEHWRDTKQQKILEKLLAWNHLIEDDKIEDTFRETLRYFYLQLVDKRIHWLIAKDRAEGLDLNEKKELSHLLVKKQEKK*	common_virus_hmm	common_virus	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0023	persistent	direct	high	1760	0.999	GCA_003130075.1_00171
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	77557	77772	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	18426	18641	GCA_003130075_1_9_79	GCA_003130075_1_9_79	-	410665	.	COG0828	Ribosomal protein S21 [Translation, ribosomal structure and biogenesis]. 	MPVIKVRENESFDVALRRFKRSCEKAGILAEVRAREFYEKPTTIRKRENATRAKRHAKRVARENARNTRLY*	mmseqs_cdd	nonviral_gene	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0024	persistent	direct	high	215	0.995	GCA_003130075.1_00172
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	77997	79025	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	18866	19894	GCA_003130075_1_9_80	GCA_003130075_1_9_80	+	410665	.	COG0533	tRNA A37 threonylcarbamoyltransferase TsaD [Translation, ribosomal structure and biogenesis]. 	MRILGIETSCDETGVAIYDEEKGLIANQLHTQIALHADYGGVVPELASRDHIRKLAPLLQAALQEANLTAKDIDGVAYTSGPGLVGALLVGSTVARSLAYAWNIPAIGVHHMEGHLLAPMLEENPPHFPFVALLVSGGHTQLVRVDGVGRYELLGESIDDAAGEAFDKTAKLLGLDYPGGAALARLALNGTPNRFAFPRPMTDRPGLDFSFSGLKTFAANTLHQVMQEEGELTEQSKADIAYAFQEAVVDTLAIKCKRALKQTGLKRLVIAGGVSANKQLRQTLAELMQQLGGEVFYPQPQFCTDNGAMIAYAGFLRLKQGQQQDLAIEVRPRWAMTELTAV*	mmseqs_cdd	nonviral_gene	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0025	persistent	direct	high	1028	0.999	GCA_003130075.1_00173
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	79097	79330	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	19966	20199	GCA_003130075_1_9_81	GCA_003130075_1_9_81	+	410665	.	.	hypothetical protein	MDNIKFRAMRAAGIGCFVMLAIIGFFVFTTPTNELIDFLTEIGQMAGGRTTIGVFILASLPPLTGFICYYFWKWVLK*	.	hypothetical_protein	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0026	persistent	direct	high	233	0.996	GCA_003130075.1_00174
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	79330	79908	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	20199	20777	GCA_003130075_1_9_82	GCA_003130075_1_9_82	+	410665	.	PRK04296	thymidine kinase; Provisional	MAKLYFYYSTMNAGKSTTLLQSSYNYRERNMNTLVYTAAIDDRFGAGRVTSRIGISEQANTFARDTDLFAEIQQHVTKEPLHCILVDEAQFLTKEQVYQLSDVVDKLNIPVLCYGLRTDFQAELFEGSRYLLAWADQLEELKTICYCGRKANFVLRLNEQGEVVKQGDQIQIGGNDSYLSVCRLHYKERMAE*	mmseqs_cdd	common_virus	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0027	persistent	direct	high	578	0.998	GCA_003130075.1_00175
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	79992	82133	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	20861	23002	GCA_003130075_1_9_83	GCA_003130075_1_9_83	-	410665	.	PDB:5TT5_A	DNA-ligase	MTSSTQQEIENLLKILRCYTNKPICKLIIILHTLIIKKLIQLLHDHANKKVDDLRKTLRHHEYQYHVLDDPQIPDSEYDRLFHQLKALEQQHPELVTADSPTQRVGARPLSEFAQIHHEIPMLSLDNAFSDEEFLAFVKRIQDRLGLVPEPLTFCCEPKLDGLAVSILYVNGVLTQAATRGDGTIGEDITQNIRTIRNIPLQLLTDNPPARLEVRGEVFMPHEGFERLNERALEQGEKTFANPRNAAAGSLRQLDPKITSQRPLMLNAYSIGIAEGVDLPPTHYERLQWLKSVGVPVNSEIRLCDGVENVLNFYRTMMEKRSSLGYDIDGTVLKVNDIALQQKLGFISKAPRWAIAYKFPAQEELTVLNDVEFQVGRTGAITPVAKLQPVFVAGVTVSNATLHNGDEIERLNIAIGDTVIIHRAGDVIPKIIGVVHDRRPANARQIVFPTRCPVCDSLIVRIEGEAVARCTGGLFCAAQRKEALKHFVSRKAMDIDGVGAKLIEQLVDRELVHTLADLFKLDLTTLTRLERMGPKSAENALASLEKAKHTTLARFIFALGIRDVGEATALNLANHFKTLEALQNADLEQLQKVPDVGEVVANRIFVFWREEHNVAVVNDLIAQGVHWETVEVQDVKENPFKDKTVVLTGTLSQMGRNDAKALLQQLGAKVSGSVSAKTDYVIAGEAAGSKLSKAAELGVQVLSEEAFLAWVNG*	common_virus_hmm	common_virus	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0028	persistent	direct	high	2141	1.0	GCA_003130075.1_00176
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	CDS	82238	83266	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	23107	24135	GCA_003130075_1_9_84	GCA_003130075_1_9_84	-	410665	.	COG3115	Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning]. 	MDLNTILIILGVIALLALIAHGIWSNRREKSQYFKNANTFSQNHQPNRFNAPQSAQPITEALIADKPEHSFVEETPPQQQALDFEATATPSINEPHSIERAVDEIKITLPNGTSNTTLNNVESTASYSFHDQPTQPIQPVMVQANTPFQSYDEQSSYAEPNTASLAESNSRHTENEYVTPTVSLNQANEQHSATNQSTTSAGEMVSENQRTPDFIMLYVVAPENREFNGGRLAQALDGLGFIFGDQHIYHRHLDLTAASPVLFSVANLQQPGTFNPYDMDNLVTVGIAIFMQLPSPGNDIVNLKTMIRAARSLADELGGFVLTDKQEIFNDHAEQEYLSKVA*	mmseqs_cdd	nonviral_gene	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_CDS_0029	persistent	direct	high	1028	0.999	GCA_003130075.1_00177
GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote	cenote	tRNA	73534	73607	GCA_003130075.1	NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075.1_NRCW01000001.1	GCA_003130075.1|NRCW01000001.1	GCA_003130075_1_9	GCA_003130075_1_9@C1	14403	14476	tRNA-Met	tRNA-Met	-	410665	.	tRNAscan-SE score: 85.3	Met	NA	tRNAscan-SE	.	C1	24135	59132	83267	GCA_003130075.1|NRCW01000001.1@region_59133_83267@tool_cenote_tRNA_0001	.	.	.	.	.	.