core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	56233	56562	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	1	330	GCA_003130095_1_3_53	GCA_003130095_1_3_53	+	736964	.	TIGR00103	DNA-binding protein, YbaB/EbfC family. The function of this protein is unknown, but it has been expressed and crystallized. Its gene nearly always occurs next to recR and/or dnaX. It is restricted to Bacteria and the plant Arabidopsis. The plant form contains an additional N-terminal region that may serve as a transit peptide and shows a close relationship to the cyanobacterial member, suggesting that it is a chloroplast protein. Members of this family are found in a single copy per bacterial genome, but are broadly distributed. A member is present even in the minimal gene complement of Mycoplasm genitalium. [Unknown function, General]	MFGKGGLGNLMKQAQQMQDRMQKMQEEIAQLEVTGESGAGLVKITINGAHNCRRIDIDPSLMEDDKEMLEDLIAAAFNDAVRRAEELQKEKMASVTAGMPLPPGFKMPF*	mmseqs_cdd	nonviral_gene	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0001	persistent	direct	high	329	0.997	GCA_003130095.1_00058
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	56638	57240	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	406	1008	GCA_003130095_1_3_54	GCA_003130095_1_3_54	+	736964	.	COG0353	Recombinational DNA repair protein RecR [Replication, recombination and repair]. 	MQTSPLLENLIESLRVLPGVGPKSAQRMAYHLLQRNRSGGMRLAQGLTEAMSKIGHCEHCRTFTEEDVCHICKNPRRQNSGLLCVVEMPADILAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQKRLQTESFKEVILATNPTVEGDATANYIAELCLQQNVKVSRIAHGIPVGGELEMVDGTTLTHSFLGRREIG*	mmseqs_cdd	nonviral_gene	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0002	persistent	direct	high	602	0.998	GCA_003130095.1_00059
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	57268	59190	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	1036	2958	GCA_003130095_1_3_55	GCA_003130095_1_3_55	+	736964	.	PDB:5D5H_A	DNA-topoisomerase-1	MRLFIAEKPSLGRAIADVLPKPHQRGDGFIKCGDNDCVTWCVGHLLEQAEPDAYDARFKQWRLEDLPIVPQKWQLIPKKETYKQLKTVEKLVQQADILVNAGDPDREGQLLVDEVFSYLNLPPEKRNAIQRCLISDLNPSAVEKAIKKLQPNRDFVPLSTSALARARADWLYGINMTRAYTIRGRQAGYNGVLSVGRVQTPVLGLIVRRDLEIEHFQPKDFFEVLAWLRDPKEEKTPKKSTALFSALWQPSKACEDYLDEDGRVLSHALAENVVKRITDQPAEVTDYSDKREKETAPLPYSLSALQIDAAKRFGMSAQEVLDTCQRLYETHKLITYPRSDCRYLPKEHFTDRMAVMNAISTHLTQFQPLPEIIDPEQKNRCWNDKKVEAHHAIIPTAKNRPVSLTPAEQNIYFLIARQYLMQFCPDAEYRKCKITLNIAGGTFIAQARNLQIAGWKQLWGKEDSDDEQQDTLLPVVKKGQMLHCEKGEIISKKTQPPKPFTDATLLSAMTGIARFVQDKELKKILRETDGLGTEATRAGIIELLFKRGFLYKKGRNIHSTEAGRILINALPDMATQPDMTAHWESQLDGISRKQASYQQFMQNLTQLLPELLHYINFSALRELSRHNPGVNKTVPRAKKS*	common_virus_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0003	persistent	direct	high	1922	0.999	GCA_003130095.1_00060
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	59351	59701	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	3119	3469	GCA_003130095_1_3_56	GCA_003130095_1_3_56	+	736964	.	COG1314	Preprotein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular transport]. 	MYSALLIIYLVVSIALIAFILLQQGKGADAGASFGGGASGTVFGSAGAGNFLSRTTAVLAIIFFVISIVIGNINSHKNNAKQGAFDDLSGTAEQIQQQQQKAPAVLDTKNSDIPQQ*	mmseqs_cdd	nonviral_gene	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0004	persistent	direct	high	350	0.997	GCA_003130095.1_00061
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	60225	61388	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	3993	5156	GCA_003130095_1_3_57	GCA_003130095_1_3_57	-	736964	.	PRK09560	pH-dependent sodium/proton antiporter; Reviewed	MGNNGFFQIPIFSGYVSQNSRPATAILLANTSFNQHYFGFLDTPVSVQFGAFSIAKPLLMWVNDGFMAVFFVLVGMEVKREMLEGSLSSYQQAIFPAIAAIGGMVVPALIYFMIAQGTPEIYSGWAIPMATDIAFAIGIVALLGKRVPLPLKVFLLALAIIDDLGAIIVIAIFYSHELSTPALIIAVVTISILVTMNRFKVSALCAYMVVGLILWASVLKSGVHATLAGVIIGFCIPMEGRNGSSPLHQFEHILAPWCSYLILPLFAFSNAGVPLENVGLSSLNSPLTLGIALGLIVGKPLGVFLFSYLSVKLRLAQLPQGVNFAQIFAIAILCGIGFTMSMFLAGLAFGEAAYNSFDTLSRLGILLGSGVSAVVGYVLLRKTTAQA*	mmseqs_cdd	nonviral_gene	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0005	persistent	direct	high	1163	0.999	GCA_003130095.1_00063
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	61463	62314	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	5231	6082	GCA_003130095_1_3_58	GCA_003130095_1_3_58	-	736964	.	PFAM:PF00145.16	DNA-methyltransferase	MANQAQRNFKQAPLPFIGQKRMFLKHFERVLMENINNDGEGWTIIDVFGGSGLLSHAAKRIKPKASVIYNDFDGYSDRLKHISDINRLREILYQTVDGIIPKNKRISKHLKQEIINKINAFKGFLDLNSLSSWLLFSGQQVASLDELYGKDFWHCIRQSDYPEAIGYLDGIEVIRESFHVLLPKFKDNPKTLFILDPPYLCTRQESYKQATYFDLIDFLRLINLTRPPYIFFSSTKSEFIRFIEYTQEQQVDNWESFAGAKRIVVNASASYSGKYEDNLIYKF*	phrogs_hmm	hypothetical_protein	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0006	cloud	direct	high	851	0.999	GCA_003130095.1_00064
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	62627	63049	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	6395	6817	GCA_003130095_1_3_59	GCA_003130095_1_3_59	-	736964	.	pfam13876	Phage protein (N4 Gp49/phage Sf6 gene 66) family. This family of phage proteins is functionally uncharacterized. The family includes bacteriophage Sf6 gene 66 as well as phage N4 GP49 protein. Proteins in this family are typically between 87 and 154 amino acids in length. There is a conserved NGF sequence motif.	MNKLTIEYLTELVDDVEYVHQGLLTICTITLKNGYKLAGTSVCVDNQNYDPLIGNNCAFANALDKLWELESYLLKQKIYESQNNKVTLRNGNQGEVVYTSPFGKLLVIEDNGDELPAVHWHNAEGSFYADCASDLDIVQE*	mmseqs_cdd	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0007	cloud	direct	high	422	0.998	GCA_003130095.1_00066
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	63053	63544	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	6821	7312	GCA_003130095_1_3_60	GCA_003130095_1_3_60	-	736964	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MADNVYLALYKGKKTGINPTALLARFSDWITRKLTKGPYSHCEIAVERIEYTSGHHYEHELHYDCYSSSIRDGGVRCKEIDLAERDKWDLVLLDGVSEAEVKFYFNATKGSKYDWWGAIGIVLGIKQKRSKYFCSEWCFNAITGKTQGWRFSPNQLATIFKKG*	phrogs_hmm	hypothetical_protein	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0008	cloud	direct	high	491	0.998	GCA_003130095.1_00067
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	63537	64172	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	7305	7940	GCA_003130095_1_3_61	GCA_003130095_1_3_61	-	736964	.	PFAM:PF14301.5	tail-fiber-assembly-protein	MYLLNIIDKDGHFELIDSDFIALYNIDKSTLIELTDTQYAHYLTLNSDDITFKDGTFHARSFRPSAAHEWDGKAWEIPPEKLTALLAEKRAQLIDEIDKKAETIYSVWTRFEAEYKARKEAAEVFKASGYKGEPSIYITSFATPAGVDNKTATEIILQQAAGLQKLQDHLAALRMRKYELKHPNLTLEQLQAISDDIIKQMDELMEAYKNG*	phrogs_hmm	hypothetical_protein	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0009	cloud	direct	high	635	0.998	GCA_003130095.1_00068
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	64175	65857	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	7943	9625	GCA_003130095_1_3_62	GCA_003130095_1_3_62	-	736964	.	PDB:1OCY_A	Tail-fiber	MANLKEKDVWEDGIYQIEENDPVLGGENGITNKPIKQLANRTLWLKKALELFGKKSAPKDLTANSTSTADESGHSHKLPVGSTTQKGIWQATSDTGLDSEGLVFTAKGAKKLAQIIANVQIAVSQKWTAKSATETEPGILPVSHKTDGTAKDKFASEFAVGEAAKKGLPVGSIVAFPTAVTKPNGFLRANGSTFNASAFPDLYKVLGNSNTLPDLTRSDVGMTAYFATDAIPAGWIAFDDIAAQVTQQRYPELYRHLVAKYGSISAVPKAADRFIRNAGAGLQVGQTQEDTIKTHKIQVPDSSYPGNNMGIFHYGERGNLNDQNYNELTYNGGDETRPKSLVLKLCIKAVNSFDDVQFWIKSHGEVVNIGALDAGRLSQGLQDKADRNHTHTVSDIVDFNSSVTGLIKNVVRKTYQQTKQHKKKIKIRVRKGPSYVYEDGEETINIQTEGTMTVYPNGKIEQIIAFRNFSPTWFGAETNDNALHIPVQLWSSMPNKVDYVTVFLNKTKSGIQYASEATEWILGWAEDIQEQIKDKVTIRAVRWTGGQDEPVDLIIKVEGY*	hallmark_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0010	cloud	direct	high	1682	0.999	GCA_003130095.1_00069
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	65884	66450	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	9652	10218	GCA_003130095_1_3_63	GCA_003130095_1_3_63	-	736964	.	PFAM:PF09684.9	Tail-protein	MANLTYADIIERETKYKALADLSYRMNALDKSKVMTTLVELLDDEFIPLLAEKWSVTGYDGAFLAESDQSKRGLIKAAIELHRYKGTPWSIREVLRRLGFGEIEIDEGLKARTYEHKFVQTIPLSDKWAYYAIRLNQPITNEQAQQLRKILRNFAPARCTLAVLDYKSVPLRYNNKARYNGSYNHGSN*	hallmark_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0011	cloud	direct	high	566	0.998	GCA_003130095.1_00070
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	66443	67549	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	10211	11317	GCA_003130095_1_3_64	GCA_003130095_1_3_64	-	736964	.	CDD:COG3948	baseplate-assembly-protein	MNRNEVKVVDDNVESILTEAIALYEKRTGKILQPAQIERALINVYAFRESLARQGINEGFRQTFPQYATGLALDLCGETFGCYRLLDKPARTILRFSITGDHPSVLIPKGTRVAVTDDIEFITLNDDVITPLIAYVEIEAACNKTGDVGNGWELGRVKTLKSAVKFAGEITITNIDVPSGGLAREEDDDYRKRILAAPEAFTSCGSIAAYDYHTRAVSQAIADVNISNPRGSLVRITVLTKTGLPDSRLLNDVKQYVGPERRRPLCDTVEVIAPTKRDYQINATLTLLDGYREDIVKTKARDALQLYLSDKTKKLGIDVVPSAIISALRVDGVYEVDLITPAKIIVSETEWANCTAINIDVAPERSNG*	hallmark_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0012	cloud	direct	high	1106	0.999	GCA_003130095.1_00071
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	67546	67911	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	11314	11679	GCA_003130095_1_3_65	GCA_003130095_1_3_65	-	736964	.	PDB:5IW9_B	Baseplate-wedge-protein	MNTQNTLLTTHWQLAPSLDSQVVQGVDDIHQCIDHILSTMKGTDVLRPEFGSDHFQYIDQPEDVAIPNIVREITLAVQRWEKRINIDSVDVEGSAPHFEFVIHWSLTEDVYREIYSTRVTQ*	hallmark_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0013	cloud	direct	high	365	0.997	GCA_003130095.1_00072
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	67966	68583	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	11734	12351	GCA_003130095_1_3_66	GCA_003130095_1_3_66	-	736964	.	PDB:3VTO_Q	central-spike-protein	MMNTHNFGATYQEGIVSAIDPASHKVRCKIPALEDLETAWLSYLTPNAGGNQFYCLPDEGELVALLLDARGEGGCVLGAIYNAQDPTPTGDSNIWMKKFSNGTVIKHDRKSGNVEVSAVGDVLIKSPSKVTIDCPETETTGNLLVSGALTYMQGMTGNGGGSGATATINGSLETKGGDVKADNISLKQHKHTEQGDGKQTSAAQT*	hallmark_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0014	cloud	direct	high	617	0.998	GCA_003130095.1_00073
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	68580	69761	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	12348	13529	GCA_003130095_1_3_67	GCA_003130095_1_3_67	-	736964	.	PDB:3CDD_F	Tail-protein	MSNNVPKPDFSMLYEKTNITADIEPHLLELTYTDNLEGESDELTVVFEDISGKWIRQWYPTQGDKLKAAIGYKGAQLTDIGAFEIDEVEYNYHPSYIQIKALSTGIANANRTLKPKAYENTTLKQIVGIIAGRLKMKMVGTIKHIPVKRATQYQERDVEFLARLAREYHHSFKIVGDQLVFTDKDELGKSEAVVTLEEKDTISISLRDRIKDTAKEVDVSGYDANGKKVIKKRKKAKALRENMKQAQSASGDTLKVVTRGETQEQIDARADAALAEQNDDQTAGNITVIGNPKLVAGSTLALRNLGIFSGKYLIKSSRHSIVRGGGYTTSLEVRMLEFIPDDLQNTGVLTEAKPLDTLNGKPDLRYVDDRLLQTNAQDYALAKQQRRETGITK*	hallmark_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0015	cloud	direct	high	1181	0.999	GCA_003130095.1_00074
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	69751	69987	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	13519	13755	GCA_003130095_1_3_68	GCA_003130095_1_3_68	-	736964	.	COG5004	P2-like prophage tail protein X  [Mobilome: prophages, transposons]. 	MTQQTVLKHTVKQGERWDNLAYYYYGNALEFARIINANPHISLCEVLPTGATVYIPVLNIKPTNNESMPPWLRGSDEQ*	mmseqs_cdd	nonviral_gene	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0016	cloud	direct	high	236	0.996	GCA_003130095.1_00075
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	69965	70906	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	13733	14674	GCA_003130095_1_3_69	GCA_003130095_1_3_69	-	736964	.	pfam06995	Phage P2 GpU. This family consists of several bacterial and phage proteins of around 130 residues in length which seem to be related to the bacteriophage P2 GpU protein, which is thought to be involved in tail assembly.	MYFMLGKVAFEPVDLTDFNESHSADFAEHAVLKGKPRLQAMGEKLSELSFAIRLHHKIGGVEKRYQALLSAQAKQEAMPLIIGRGKYKGNFVITDISSATLFTDKFGNALAREMHISLREFVGDMDDNPLGAALNLGSNSLLGSILPEGALKALSEVKETVQKGAELFNQGRQIVDEVRNTIAIVRQLADDPMAALAYLPGVLGNLDGALGSFGELTGMSGLFEGIRDVLPAISEFSQEANGIYSDLMVMKDSLTFGNQSDGANWNDWFTPADNALSDINERIDNAAAPVAAMTAWIVLREDEDVTHDTADRT*	mmseqs_cdd	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0017	cloud	direct	high	941	0.999	GCA_003130095.1_00076
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	70906	73176	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	14674	16944	GCA_003130095_1_3_70	GCA_003130095_1_3_70	-	736964	.	PFAM:PF10145.8	minor-tail-protein	MSNKLAIGLVITAGVSGAIKGIQGVCSSFKILRDESLKTTQKMGALAKTGMASLGTLASSAAAVAGTIRGLADPAIKFESAMADVRKVVDFDTPEQFKEMGNDILKLTRTIPMAGEEIAAIVAAGGQSGVARENLLGYAKDAATMGVAFDMAAGDAGEAMATMANVLGKPITEMAQFGDVINHLSDNANSKAKDIVNVITRVGSDTRMLGLSEKQAAALGSTFLSMGKAPELAAQAVKGMSSAFLQLKAGAHEKELKKLGFTTKIFAAAMNKDAQGAISSFIEKVKKMPKDKQYPLLAKIFGKQYADDVLLLAQNTGEYNRQLGLLQETDENGNLKYIGSMQREFENRSNTTENKLTKLKSSLAEIATKIGNAFLPVITSFVENITPVIYSITEWVETNPQLMEWVLTIGGGIGAVVGGLLTLHSAFSFVSAGLLPFIKVGKFLGGFLGNFLFSAISKLSLGFGYLIGYIAKGAMMFGKAIFMMSRALLTNPIGLLITGIAVAAYLIYDNWGKIGPWFAELWQTVSGAFSSAWSSITNFCSEAWTNISNFFTSGIGNITATILDWSPLGLFQQVFSTVFSWFGIDVPSKFSDFGKNMIDGLVNGIKNAWEGAKQIVSDLGEGIKGWFAEKLGIHSPSRVFKGYGVNVVEGLAIGMNKSIPMAENASDNLSSAVGLNGVSHNTGVLANYQPLNRADVMSSGAMQSQGITVHFNPTINVNGGDRNGVLNQVEQGLKMSLSEFEMMLKRVLDQQQRRAY*	hallmark_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0018	cloud	direct	high	2270	1.0	GCA_003130095.1_00077
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	73214	73474	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	16982	17242	GCA_003130095_1_3_71	GCA_003130095_1_3_71	+	736964	.	.	hypothetical protein	MQGEKLIENAQAVVFLFAVSGYGYSLYRFLSFYSESNELTWIAIAISAFLFVLPWGLIGALLAFAVKVVITSLTGIFTTAQTLFRH*	.	hypothetical_protein	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0019	cloud	direct	high	260	0.996	GCA_003130095.1_00078
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	73642	73890	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	17410	17658	GCA_003130095_1_3_72	GCA_003130095_1_3_72	-	736964	.	PFAM:PF10109.8	tail-protein	MSETILTLDFPIQDGQGNTLTELKIRRPKVRDIRKMTGKTEAEQSVSLLAIVTGLVPEDIDELDMADFQRAAQIIEKMQKGK*	phrogs_hmm	hypothetical_protein	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0020	cloud	direct	high	248	0.996	GCA_003130095.1_00079
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	73991	74509	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	17759	18277	GCA_003130095_1_3_73	GCA_003130095_1_3_73	-	736964	.	PDB:5W5E_O	major-tail-protein	MSISINQIVNANVYTNGVSQMGRANEVKIPDIEFETIEHKGLGLHGAIKLPAGTNAIEAEINWDSFYPEVRALLLNPYKNTQLMIRSNLQVFDSRGLAAEEPMVTIMNVSASKIGGTGHKNKENSEFADTVNVYSIKQTVAGKELLFIDVLANIYRVNGQDVLQKYRTNIGQ*	hallmark_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0021	cloud	direct	high	518	0.998	GCA_003130095.1_00080
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	74522	75904	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	18290	19672	GCA_003130095_1_3_74	GCA_003130095_1_3_74	-	736964	.	PDB:3J9Q_C	sheath-tube	MAFHHGTKTTRVAGGSVAVETVDGAIIGIVGTAPIGAVNELTVCQTTKDFSQFGVILDKGFTLPDAFDVLARYKAGKVYVVNVLDPTKHKTNVTNEVLTQDSNTLRAQTAHAGLLNLTLISDRTLTLGTDYVADMQTGEITLKARHETLKATYDYADPTKVTEEDIKGGIDSATGKRKGFELLRDGFNLFGADAKILICPEFDKTASCAAALGTLAVQLKAVAYVQLPKGTSLSKAIQGRGPLGTINASASSERVRHFFPYAIGSNNTLESLAVHAAGLRMKTDTEHGYWFSTSNRELQGVIGMEVKLTARVDDEQSETNQLNAVGITTIFNSFGTGFRLWGNRSSNYPTVTHIINFETALRTGDLIDESIRRTELQYVDRPIDDALIDSLTETVDTYLRALPSIVGYSVSLDHDYDLVDEFSKGHVPLVYDYTPKIPAELISNKSVMTRKYLVNLVSQR*	hallmark_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0022	cloud	direct	high	1382	0.999	GCA_003130095.1_00081
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	75914	76399	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	19682	20167	GCA_003130095_1_3_75	GCA_003130095_1_3_75	-	736964	.	PDB:2GJV_C	tail-completion-protein	MSATLPILDSIRKRIEDKTEQFSIELFPDDLEHYNLTDEFGAVLVQYAGSKFEGIDSVDIIQQRRVVMIALTVIARSQHDDHGAVDMLDKIRLAVVGFKPTNCTACSLVSEEFAGEADGLWQYQLMVQTETWQVELREPEKLPKFTAALYRRAGNPKPNQP*	hallmark_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0023	cloud	direct	high	485	0.998	GCA_003130095.1_00082
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	76401	76835	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	20169	20603	GCA_003130095_1_3_76	GCA_003130095_1_3_76	-	736964	.	CDD:cd08053	head-to-tail-adaptor	MYISAQDLTEVMSESTLIALSNDTSRATEADQAVLTKACAYATEIVDGYLRSRYVLPLSQVPTLVRNICLQLARFWLYSRRPEGKGFPDNVKETHAQALKDLERIQNGKLHLGLTELGSADDDNLPSALKFKTKAPQKLDLSGY*	hallmark_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0024	cloud	direct	high	434	0.998	GCA_003130095.1_00083
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	76835	77197	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	20603	20965	GCA_003130095_1_3_77	GCA_003130095_1_3_77	-	736964	.	PFAM:PF12949.6	head-tail-connector-protein	MSELQKKAYLVAAAMAILHNGKRYEQGDKIELTDEEAEKISLYIALDEDEAARQQAEAEAEKQRLAAEKAAEEAAEKAAQEAAEKEAKAKAEAEKKTQEAAKKRGQADKVVQDNKDKDEQ*	phrogs_hmm	hypothetical_protein	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0025	cloud	direct	high	362	0.997	GCA_003130095.1_00084
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	77268	78194	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	21036	21962	GCA_003130095_1_3_78	GCA_003130095_1_3_78	-	736964	.	PFAM:PF03864.14	Major-Capsid-protein	MTDLSKQRVVDPVLTELAQGYYNANMISEVLFPVAETQKEGGKIPTFGRLAFRLQTTKRELRAASNRLTPEDIGSLTVVLEENDIEYPIDIREVNETEGVYPLRQYATGVTQDVIALGREKYCAGLALDEANYDQTNKVTLSGTSQFTDPNSDPVGVIKAGIRAIKRTTGRKPNVCAISGDVWEVLSEHPKVLEKIKYVSTAVLTPEDFARLVKIDKVVIGEAVYEESGDLKDIWSKAIVLAYVAPKSKEQKQNIYEPSYGYTVRRKGGLYVDTYTEVGGKVEIVRTTDIHKPYIVGKSAGYLIKGCI*	hallmark_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0026	cloud	direct	high	926	0.999	GCA_003130095.1_00085
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	78207	79319	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	21975	23087	GCA_003130095_1_3_79	GCA_003130095_1_3_79	-	736964	.	PFAM:PF10123.8	head-maturation-protease	MQLIEIFKAGKRTDANGVVVDITTADLQQAVDAYNINFHESPAVIGHPQLNAPAYGWVKRLELDGDVLKAEFDQIDPEFAEMVEKGRFKKISSSFYLADSPNNPCPGNLYLRHVGFLGAMPPAVKGLRNPEFADNEQGVVDFSDWAEASLWRRLRDWIIGQHGQEEADKAVPDYLVASVQEESIRNEYKRFNQQEEAGFPVPSFNEPNNDSNQPSEPQGEPEMTAEEIAALKAENEQLKAEKAEAELNKAKADNADFAEGLVKAGKLAPVAKQQAIDLLNYGSTTAAGGVVEFGEGENLHGKIKAFLDAQPQIVEFGEVATKDKAAGAEDGTVQYAEGTSADAIDMDKKVRAYMKEHNVGYVAAFNAVNQ*	phrogs_hmm	hypothetical_protein	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0027	cloud	direct	high	1112	0.999	GCA_003130095.1_00086
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	79568	80032	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	23336	23800	GCA_003130095_1_3_80	GCA_003130095_1_3_80	-	736964	.	CDD:pfam05069	virion-morphogenesis-protein	MLKITLNDNQAIQKLTGIASQLQHPRKLYGLLGETLKKIHAARFEAEVEPTGKRWQALSPRTKALKAKRGKSTKILRQDGYLADRTAYNYDDKGVEFGSDAKYARLHQFGGNAGRGKKVKIPARPWLGVNAQDEQKLLKKATALLQRQINQNLK*	hallmark_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0028	cloud	direct	high	464	0.998	GCA_003130095.1_00087
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	80159	81415	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	23927	25183	GCA_003130095_1_3_81	GCA_003130095_1_3_81	-	736964	.	PFAM:PF04233.13	minor-capsid-component	MSKFTFEEQVKYFEKKLNLPTNSYLDVLGEEHDYFFMVAGANRNEVLTAFREAVDEAIQNGETLEGFRKRFDEIVANTGWQYNGGRNWRTRIIYDTNVYGAYNRGRLKQHLDLADVLPYWEYHHHDNEHPREEHIALDGTILPATDPFWRYYYPIKAYGCHCTVSAHDEDDLAEMGKTVSQSPEIEWEEKLVGVRSGNPRTVRVPKGYDVGFAPYNFERLTQSRDVDVDKLLLQKMTTAEPHLASLLIDDVLKNPKAMVLLNGAMKDMVDTVSQQKIARGNMKYVGVIPENVITKLDNLDKAPQSAVIAVRDDDVLHALRDSKQAKGISLPVEFWEQLPEKLRHPKAILLDDQQKQPTLLFVYETEQGKVAVKMDYEIKLKDVLSGKKLPHKLNMVRTASRLEDLSALGRFEVLYGEL*	hallmark_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0029	cloud	direct	high	1256	0.999	GCA_003130095.1_00088
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	81415	82842	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	25183	26610	GCA_003130095_1_3_82	GCA_003130095_1_3_82	-	736964	.	PDB:5NGD_C	Portal-protein	MTTQKQDLVTVIATRAKAIDFWSFMHYLPNPDPVLKKMGKDISAYREILSDSHVGGCVRRRKAAIKGLEWRITPTGNEKTDEILTALFDRLPVSQIINQILDATLFGYQALEVMWENQNGLLLPVAVVGKPQEWFVFDEENRLMLRTKDNRNGDLVPEKKFLLATQQADYMNPYGRADLAMCFWAATFKKGGFKFWLEFMEKYGSPWLVGKHPRQAQVHEINELLTSMEEMLGTAVAAIPEDSSISMLESASKSGSSQVFDDFLRYCKSEIAIALLGQNQTTEAEANRASATAGLEVTLDIRDDDASLVEGVFNQLLAWICELNFSVETLPTFDLYEQESIDKLQAERDGLLVGLGVQFTEKYLMRTYGFEEGDIVVAAPEKSAVKNTADFAEAIPKSIVETIGEQLEVEGEPFVEEWLQTIQDKLSQAESLEDFRNQLDSLIPELSFAEYGKVMAWASTTAHFAGRQSVEDERK*	hallmark_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0030	cloud	direct	high	1427	0.999	GCA_003130095.1_00089
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	82842	84398	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	26610	28166	GCA_003130095_1_3_83	GCA_003130095_1_3_83	-	736964	.	PDB:4IEE_A	Large-Terminase	MALLNNRPLNELAPECQSFLDCIHAFNPNELLLGYQKCWIADDSQLKIAEKTRRCGLTWAEAADNALIASTRKSDGGSDVFYIGSNKEMAREYIDAVAMWAKAFNYAAGAIQEEVFEDEDKDILTYVIYFASGFKVKALSSNPKNLRGMQGIVVIDEAAFHEYLAEVLKAALALTMWGAKVRVISTHNGADNLFNELILDSRAGRKRYSVHTITIEDACHDGLYQRICQVTKQEWTAEKEQEWIENLLNDTASEEDALEEYFCVPKNGSGLWLSRALIERQMSEKTPVVRFEAKDGFSLVPEPIRYKEMEDWSEKTLAPILQGLSPNLLHFFGEDFARSGDMTSFVILAQQQNLTKQVQFIVELGNMPYKQQEQIVLFILKRLPRFSGGAFDARGNGGYLAESARDAFGSLIDCVQLSEKWYREHTAPFKAALEDGELEAIPKDADILADLRSFQVVKGVPRIPDKRVKSTDGKTKRHGDTAIALLLAHYASRQLIQLPVKAHSRKPRASRALTKGYN*	hallmark_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0031	cloud	direct	high	1556	0.999	GCA_003130095.1_00090
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	84398	84967	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	28166	28735	GCA_003130095_1_3_84	GCA_003130095_1_3_84	-	736964	.	pfam11985	Protein of unknown function (DUF3486). This family of proteins is functionally uncharacterized. This protein is found in bacteria and viruses. Proteins in this family are about 190 amino acids in length.	MTDKNTRGRASKVDLLPPNIKTQLAMMLRDKHLSQAQILEEINDLIRDCGLDDSYQLSRTGLNRYASRMEQMASKIRNAREVAEIWTKQFGEAPQSDIGKLLMEIVKNLAFETSIGMSENGKAEPKDLALLSSAIQRLEQAESLSHKREQAIRKEMAQLAAETAEKAVVQAGLSADTVRTIKEQILGIA*	mmseqs_cdd	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0032	cloud	direct	high	569	0.998	GCA_003130095.1_00091
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	84990	85286	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	28758	29054	GCA_003130095_1_3_85	GCA_003130095_1_3_85	-	736964	.	5DYM_A	PadR-family transcriptional regulator	MSFKELMKQDQRLVILRSLVDVGYDANESILDDCLALYGHKVSRDLVRNHLNWLEEQGLVQIERLQNGFMIAKITQRGLDVANGEAFVDGVKKPSPKI*	hhsuite_tools	hypothetical_protein	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0033	cloud	direct	high	296	0.997	GCA_003130095.1_00092
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	85291	85620	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	29059	29388	GCA_003130095_1_3_86	GCA_003130095_1_3_86	-	736964	.	pfam10805	Protein of unknown function (DUF2730). This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.	MINDFLDFIRANYGVISTLAAIAIGGFWLKLDSKYAKKNDVGQLLDLAKSHENRLTALETKVENLPTALDVERVKVLVTDVKGDTKATSRQVDSISHQLGLLLEAKLKE*	mmseqs_cdd	nonviral_gene	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0034	cloud	direct	high	329	0.997	GCA_003130095.1_00093
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	85744	86001	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	29512	29769	GCA_003130095_1_3_87	GCA_003130095_1_3_87	-	736964	.	PF10883.8	Protein of unknown function (DUF2681)	MTLYFILGAIGAVVLIGGCITMKLKAANREINKLLKQNETLQAEKAVVQTQVKHFETRKKNEEKSRNTDRDALIERLHQSGDLRD*	hhsuite_tools	hypothetical_protein	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0035	cloud	direct	high	257	0.996	GCA_003130095.1_00094
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	85998	86219	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	29766	29987	GCA_003130095_1_3_88	GCA_003130095_1_3_88	-	736964	.	pfam10841	Protein of unknown function (DUF2644). This family of proteins with unknown function appear to be restricted to Pasteurellaceae.	MAMKELITNDNGRLSTTAFIQFFGALLMAGILVYAVWLDRAYVSDLFTTFALFCGGGVATKGFANAINRGKGE*	mmseqs_cdd	nonviral_gene	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0036	cloud	direct	high	221	0.995	GCA_003130095.1_00095
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	86191	86559	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	29959	30327	GCA_003130095_1_3_89	GCA_003130095_1_3_89	-	736964	.	.	hypothetical protein	MEKEIRGLTVFSFIWEAMIFGGFIGANEFAIKNLVQAYEWFFYFMTALAVLPLFVGFPDPKYQYTKVKFHWEIITNTLLGIMLAYYGYFWCATILTFVGYIFAQQNYFSEEKENGDERTDNQ*	.	hypothetical_protein	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0037	cloud	direct	high	368	0.997	GCA_003130095.1_00096
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	86559	86699	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	30327	30467	GCA_003130095_1_3_90	GCA_003130095_1_3_90	-	736964	.	.	hypothetical protein	MSASIKLSRHKKLFARGHKLSNNAKRNRRINGGTTAAQGFYLYWSY*	.	hypothetical_protein	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0038	cloud	direct	high	140	0.993	GCA_003130095.1_00097
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	86696	86920	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	30464	30688	GCA_003130095_1_3_91	GCA_003130095_1_3_91	-	736964	.	.	hypothetical protein	MGIALLLAFIFTLCFAASMIHETDSIVSALFLVLTIGCLVVVFTMLSIKDTCQTYGKFSVGSTLYQCQQIQEEK*	.	hypothetical_protein	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0039	cloud	direct	high	224	0.996	GCA_003130095.1_00098
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	86923	87474	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	30691	31242	GCA_003130095_1_3_92	GCA_003130095_1_3_92	-	736964	.	PDB:1M0D_D	endodeoxyribonuclease-I	MSLSLPITKIVIHCSATKNGKSLRTTTQTAAQRIDEWHKQRGFKRSPVLAKQFNPHLQHLGYHYVIDTDGTVETGRMVGEIGAHVKGHNQYSVGICLVGGIDASGKNYGEYTEKQWIALHKLLQKLESEYPSARICGHRDLSPDLNGDGTIAPNEWIKDCPCFDVWTWLDSEQVINFDHLFRG*	common_virus_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0040	cloud	direct	high	551	0.998	GCA_003130095.1_00099
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	87560	88246	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	31328	32014	GCA_003130095_1_3_93	GCA_003130095_1_3_93	-	736964	.	.	hypothetical protein	MNNVFFESSKSYKPDSLDLKQIKINDYDELQKLATSYKGDNWALCLACLFKAKPFLYTKGSAPLLQQMTRLPIFLQQAGLFEESKYELQELFDNVDSHIEKCAESIGKNKELYKKYLKALYLNHLFDKARLIYKREGLNNLSIQFKSIASSYFEESKVLALELDKLRKLELAEFRRECEELDKLYPNAYEAADLVIEQSKNAKKVKLRGDMLKVFILFLVCYVIYEFF*	.	hypothetical_protein	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0041	cloud	direct	high	686	0.999	GCA_003130095.1_00100
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	88321	88698	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	32089	32466	GCA_003130095_1_3_94	GCA_003130095_1_3_94	-	736964	.	pfam08765	Mor transcription activator family. Mor (Middle operon regulator) is a sequence specific DNA binding protein. It mediates transcription activation through its interactions with the C-terminal domains of the alpha and sigma subunits of bacterial RNA polymerase. The N terminal region of Mor is the dimerization region, and the C terminal contains a helix-turn-helix motif which binds DNA.	MSTETDIFDEKAPEILADLAKHIETQLLAKVKPTAEFNAELAKQIGIEVAGHIAQMWGGEVIYIPRNLILLLSERDRKIFNEFNGTNHRELARKYNVSMQWIYQIVKRVTKEEIARRQFDMFGEK*	mmseqs_cdd	nonviral_gene	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0042	cloud	direct	high	377	0.997	GCA_003130095.1_00101
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	88698	89237	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	32466	33005	GCA_003130095_1_3_95	GCA_003130095_1_3_95	-	736964	.	.	hypothetical protein	MKLCRCPVCHSDINLDQLLEDDAGRELLSIITELKFGVARPLVSYIALFRPEKSALSNTRAVKLMRDVLDQFPQSKLLAHSLSETVSAVQKKRRESKNLAPLSNHSYLKQVIETNKPLFVGIGTSKPDNEERKAEPKRENEIENTILYIENFARLGQPVEHLPGYEVWKKWKEQQKGAK*	.	hypothetical_protein	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0043	cloud	direct	high	539	0.998	GCA_003130095.1_00102
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	89234	89692	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	33002	33460	GCA_003130095_1_3_96	GCA_003130095_1_3_96	-	736964	.	COG4382	Mu-like prophage protein gp16  [Mobilome: prophages, transposons]. 	MRLTKEKAIQLIHIAKQQLRMDELSYRMLLNELTGKNSTKQMTIMQLIKVLEAMENKGFKKTTTRHHSPTTENAKVNSLIAHKIRAIWIEMSKQGLVRDGSENALNVWVRGVVNPILTAQNKPLALNVGALNDQMAGLVLERLKKWQARGRV*	mmseqs_cdd	nonviral_gene	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0044	cloud	direct	high	458	0.998	GCA_003130095.1_00103
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	89817	89996	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	33585	33764	GCA_003130095_1_3_97	GCA_003130095_1_3_97	-	736964	.	.	hypothetical protein	MTEREQQIQKINESLDYGIEQLHEAKKFLREGMNREAQILVGNARESARQVWVRLGVLK*	.	hypothetical_protein	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0045	cloud	direct	high	179	0.994	GCA_003130095.1_00104
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	89999	90196	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	33767	33964	GCA_003130095_1_3_98	GCA_003130095_1_3_98	-	736964	.	NF033650	ANR family transcriptional regulator. ANR family transcriptional regulators include the AggR-activated regulator Aar. The name ANR (AraC Negative Regulators) refers to an effect on, rather than homology to, certain AraC family transcriptional regulators.	MDEKEQKHKEVAEKAAEAERNGDYEKAARYWTKASLLTAKSAEFNWCNARSQFCQRMATRPFTGE*	mmseqs_cdd	nonviral_gene	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0046	cloud	direct	high	197	0.995	GCA_003130095.1_00105
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	90273	90419	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	34041	34187	GCA_003130095_1_3_99	GCA_003130095_1_3_99	-	736964	.	6V7V_D	Quorum sensing anti-activator Aqs1	MKDTTELERAYRFYQKAKQDKDAIACGCLNDAYEWIFNELKKLFDKQD*	hhsuite_tools	hypothetical_protein	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0047	cloud	direct	high	146	0.993	GCA_003130095.1_00106
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	90397	90939	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	34165	34707	GCA_003130095_1_3_100	GCA_003130095_1_3_100	-	736964	.	COG4396	Mu-like prophage host-nuclease inhibitor protein Gam  [Mobilome: prophages, transposons]. 	MAKKATRMKADTFVVRYQTRDEVETAIKKIGDLNRELERLAIEQNDKLAAITEEYAPLMNEVKEKTKPMMDAVQAWCESRRDELTQNGKTKTGTFNTGEVQWRQRPPSVGIRGQDSVLESLHTLGLVRFIRTKEEVNKEAMLNEPELAATVAGVTIKKGVEDFVITPFEQEVRDERYNRA*	mmseqs_cdd	nonviral_gene	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0048	cloud	direct	high	542	0.998	GCA_003130095.1_00107
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	90932	91207	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	34700	34975	GCA_003130095_1_3_101	GCA_003130095_1_3_101	-	736964	.	.	hypothetical protein	MSEEKMFCREQLQVLGVKCEPLGLAITRHIANGKTEVEGEIFSFSLSESLGQGIQIKTKGKEDACLITYESMVKMASAMGLFDNIKEEKNG*	.	hypothetical_protein	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0049	cloud	direct	high	275	0.996	GCA_003130095.1_00108
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	91200	91442	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	34968	35210	GCA_003130095_1_3_102	GCA_003130095_1_3_102	-	736964	.	.	hypothetical protein	MKTLALLLAALCLLSGCDVRAQSDRTQLKEHYYGIKEVCIDGVVYLIFDQYNRGGITPKINADFYPYTCVTNQQQGENHE*	.	hypothetical_protein	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0050	cloud	direct	high	242	0.996	GCA_003130095.1_00109
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	91454	91783	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	35222	35551	GCA_003130095_1_3_103	GCA_003130095_1_3_103	-	736964	.	.	hypothetical protein	MENSAKINRTLREQAKPHPVFGGCNKIALGYLLQAQKCVNELNKMGLHVVNIEFDKIKPRVRIEQNAITKKFEKTGQALAYMQGNDGVHFAEYQMMVEGIKVIWRSYLH*	.	hypothetical_protein	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0051	cloud	direct	high	329	0.997	GCA_003130095.1_00110
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	91783	92700	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	35551	36468	GCA_003130095_1_3_104	GCA_003130095_1_3_104	-	736964	.	COG2842	Bacteriophage DNA transposition protein, AAA+ family ATPase  [Mobilome: prophages, transposons]. 	MTLIEQIKPLLDSGTYFQRDIAAQSGISAGALSAYLKGTYTGNIDNIETALANWLATREKKAKVFVEAPHFIEIPTAKKVFSVLDMAKILPTMVTVYGASGVGKTKACQEYAKSNQNVWMITASPARATLSSILFELALELGINDAPRRKDRLSRLITKKLKGTQGLVIIDESDHLPYDALEEIRIIQEETETGFALIGNDKVYTRIQGGVNQAHEYARLWSRIGNNCGLKASTKGDIKAIAQAWGLDVADKDLMTVLYDIGGKAGGLRALTQYLRLAGMTAKGQGTVITLDLILTAQAQMKGAN*	mmseqs_cdd	nonviral_gene	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0052	cloud	direct	high	917	0.999	GCA_003130095.1_00111
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	92724	94688	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	36492	38456	GCA_003130095_1_3_105	GCA_003130095_1_3_105	-	736964	.	PDB:1BCO_A	Mu-Transposase	MEMWFSAQQLTDLETMPSSPQGINKRARVENWEKRQVQGIRGVGYEYAFTSLPQETQAELLLKQSAVEIPDVSETTKELNYLPEVIWKPFDKATEKQKEDAKAKLIPLHKLDDLVRHNVALMMALDMVALEFEVAKGSLKRWYYKVRSFERSDWLPLLLDKHNNKKAGKEAEFTPEAWEAFKADYFRNERPQFGSCYERLKRAARENGWSIPSASGVKRKIEREVPKLVQVQLREGDHAVMQYYPSMRRTVAEIEALEWINGDGYQHNVFVRWHNGEIVRPKTWIWQDIRTRKILAYRVDLSENSDTIRLSLMDLIWKYGIPKKCTIDNTRAAANKWMTGGVKNRYRFKVKEDDVTGIIPLLGIELLWTSVQFGKGHGQAKPIERAFSHGGLGELVDKHPSLAGFYAGENVYNKPDNYNGGKDGVPYETFIMALEDGIRTFNEREGRQTEICQGIYSFSQVFERDYAKAQIRKASSEQMRFLMLMSEAVSINKEGKFSLKVGGKVNGGFNEYTAFDLIASQHRKVVVKFDPADLHNKVWVYSLEGVFLAEAECTSAKAFGDKAAGREHDKARKQFVKAVKAQAKAQISMNAQEAARYQPQFEEEDAPEPKIIEMIQREGTTMRKVAVELDDEELNEFEQGWQKGLEMMKKEKGL*	common_virus_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0053	cloud	direct	high	1964	0.999	GCA_003130095.1_00112
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	94697	94909	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	38465	38677	GCA_003130095_1_3_106	GCA_003130095_1_3_106	-	736964	.	COG3423	Predicted transcriptional regulator, lambda repressor-like DNA-binding domain [Transcription]. 	MKKSKKDMHRAFIVAMIKEKGKTLSQLSIEAGLHPRTLGNVLDRKYPKGEKIIADFVGMKPEEIWPTRYE*	mmseqs_cdd	nonviral_gene	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0054	cloud	direct	high	212	0.995	GCA_003130095.1_00113
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	95113	95871	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	38881	39639	GCA_003130095_1_3_107	GCA_003130095_1_3_107	+	736964	.	PDB:2FJR_A	Repressor-protein-CI	MRNSKEWFSANELKDLEGLPNSPQGINKRARTQNWIKREKDGVQGGAVEYHYSSLPKEVQKSLGFIPSVASSIGATVGAMVAGVPGAVIGGVIGSITGSSSSNETKVDISNENVIMIDSYSSINVSAGFGSFNEGVTKPDEQTPYSAALLRKLGVTPRYAAVFWADGISMRPTIEDGDQMLVDLKRKEIKGDKIYLVQNGSSVWVKRVKIRWDGVELISDNREEYPPIILSKDEAENLQVIGQLVHLGKNMI*	common_virus_hmm	common_virus	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0055	cloud	direct	moderate	521	0.686	GCA_003130095.1_00114
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	96347	97120	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	40115	40888	GCA_003130095_1_3_108	GCA_003130095_1_3_108	-	736964	.	TIGR02070	monofunctional biosynthetic peptidoglycan transglycosylase. This family is one of the transglycosylases involved in the late stages of peptidoglycan biosynthesis. Members tend to be small, about 240 amino acids in length, and consist almost entirely of a domain described by pfam00912 for transglycosylases. Species with this protein will have several other transglycosylases as well. All species with this protein are Proteobacteria that produce murein (peptidoglycan). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]	MRKKKTIKFPFKLANLRNLSLRRLRLFRKFPTQSAVRFLYRFLLATLVVTFAFRFIPIPYSSYMLEQKVSHILSGDFTYQTRYDWVSLEDISWQMQLAVIAAEDQNFPEHYGFDFTAIKRAFLHNQKSNQIRGASTISQQTAKNLYLWHGQSWLRKAIEVPATLMLETLWSKKRILEVYLNIAEFGEGIYGVEAASRFYFKKPAKNLSQNEAALLAATLPNPIIYKANAPSAYTKRRQLWIQRQMEQLGKSYLETLN*	mmseqs_cdd	nonviral_gene	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0056	persistent	direct	high	773	0.999	GCA_003130095.1_00115
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	CDS	97098	97406	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	40866	41174	GCA_003130095_1_3_109	GCA_003130095_1_3_109	-	736964	.	COG2973	Trp operon repressor [Transcription]. 	MYISRNLEQWNAFLNMLQTAFEQGKAQEVLTLLLTPDERDALGLRLQIIAQLLNKELPQREIQQNLNTSAATITRGSNMLKTMDPVFINWIKTQLNAQEKNH*	mmseqs_cdd	nonviral_gene	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_CDS_0057	persistent	direct	high	308	0.997	GCA_003130095.1_00116
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	256519	257547	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	1	1029	GCA_003130095_1_5_244	GCA_003130095_1_5_244	+	346413	.	COG3115	Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning]. 	MDLNTILIILGVIALLALIAHGIWSNRREKSQYFKNANTFSQNHQPNRFNAPQSAQPTTETPIADKPVHSFVEETPPQQQALDFEATATSTISESHSIERAVDEIKITLPNGTSNTTLNNVESTASYSFHEQPTQPVQPVMTQANTSFQSYDEQSSYAEPNTASLAESNSRQTENEYVTPTVSLNQANKQHTATSQSITSAGEMISDNQRTPDFIMLYVVAPENREFNGGRLAQALDGLGFIFGDQHIYHRHLDLTAASPVLFSVANLQQPGTFNPYDMDNLVTVGIAIFMQLPSPGNDIVNLKTMIRAARSLADELGGFVLTDKQEIFNDHAEQEYLAKVA*	mmseqs_cdd	nonviral_gene	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0001	persistent	direct	high	1028	0.999	GCA_003130095.1_01313
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	257651	259666	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	1133	3148	GCA_003130095_1_5_245	GCA_003130095_1_5_245	+	346413	.	PDB:5TT5_A	DNA-ligase	MTTSIQQQIDDLRKTLRYHEYQYHVLDDPQIPDSEYDRLFHQLKALEQQHPELITADSPTQRVGARPLSEFAQIKHELPMLSLDNAFSDEEFLAFVKRIQDRLVLVPEPLTFCCEPKLDGLAVSILYVNGVLTQAATRGDGTTGEDITQNIRTIRNIPLQLLTDNPPARLEVRGEVFMPHDGFERLNERALEQGEKTFANPRNAAAGSLRQLDPKITSQRPLVFNAYSIGVAQGIDLPPTHFERLQWLKSIGVPVNSEIRLCDGVENVLNFYRTMMEKRSSLGYDIDGTVLKVNDIELQQRLGFISKAPRWAIAYKFPAQEELTVLNDVEFQVGRTGAITPVAKLQPVFVAGVTVSNATLHNGDEIERLNIAIGDTVIIRRAGDVIPQIIGVVHDRRPANARQIVFPTRCPVCDSLIVRIEGEAVARCTGGLFCAAQRKEALKHFVSRKAMDIDGVGAKLIEQLVDRELVHTPADLFKLDLTTLTRLERMGPKSAENALASLEKAKHTTLARFIFALGIRDVGEATALNLANHFKTLEALQNADLEQLQQVPDVGEVVANRIFVFWREEHNVAVVNDLIAQGVHWETVEVQDVKENPFKGKTVVLTGTLSQMGRNDAKALLQQLGAKVSGSVSAKTDYVIAGEAAGSKLSKAAELGVQVLSEEEFLAWVNG*	common_virus_hmm	common_virus	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0002	persistent	direct	high	2015	1.0	GCA_003130095.1_01314
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	259737	260315	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	3219	3797	GCA_003130095_1_5_246	GCA_003130095_1_5_246	-	346413	.	PRK04296	thymidine kinase; Provisional	MAKLYFYYSTMNAGKSTTLLQSSYNYRERNMNTLVYTAAIDDRFGAGRVTSRIGISEQANTFARDTDLFAEIQQHVTKEPLHCILVDEAQFLTKAQVYQLSDVVDKLKIPVLCYGLRTDFQAELFEGSRYLLAWADQLEELKTICYCGRKANFVLRLNEQGEVVKQGDQIQIGGNDSYLSVCRLHYKERMAE*	mmseqs_cdd	common_virus	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0003	persistent	direct	high	578	0.998	GCA_003130095.1_01315
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	260315	260548	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	3797	4030	GCA_003130095_1_5_247	GCA_003130095_1_5_247	-	346413	.	.	hypothetical protein	MDNIKFRAMRAAGIGCFVMLAIIGFFVFTTPTNELIDFLTEIGQMAGGRTTIGVFILASLPPLTGFICYYFWKWVLK*	.	hypothetical_protein	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0004	persistent	direct	high	233	0.996	GCA_003130095.1_01316
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	260619	261647	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	4101	5129	GCA_003130095_1_5_248	GCA_003130095_1_5_248	-	346413	.	COG0533	tRNA A37 threonylcarbamoyltransferase TsaD [Translation, ribosomal structure and biogenesis]. 	MRILGIETSCDETGVAIYDEEKGLIANQLHTQIALHADYGGVVPELASRDHIRKLAPLLQAALQEANLTAKDIDGVAYTSGPGLVGALLVGSTVARSLAYAWNIPAIGVHHMEGHLLAPMLEENPPHFPFVALLVSGGHTQLVRVDGVGRYELLGESIDDAAGEAFDKTAKLLGLDYPGGAALARLASNGTPNRFAFPRPMTDRPGLDFSFSGLKTFAANTFHQVMQEEGELTEQSKADIAYAFQEAVVDTLAIKCKRALKQTGLKRLVIAGGVSANKQLRQTLAELMQQLGGKVYYPQPQFCTDNGAMIAYAGFLRLKQGQQQDLAIEVRPRWAMTELTAV*	mmseqs_cdd	nonviral_gene	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0005	persistent	direct	high	1028	0.999	GCA_003130095.1_01317
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	261872	262087	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	5354	5569	GCA_003130095_1_5_249	GCA_003130095_1_5_249	+	346413	.	COG0828	Ribosomal protein S21 [Translation, ribosomal structure and biogenesis]. 	MPVIKVRENESFDVALRRFKRSCEKAGILAEVRAREFYEKPTTIRKRENATRAKRHAKRVARENARNTRLY*	mmseqs_cdd	nonviral_gene	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0006	persistent	direct	high	215	0.995	GCA_003130095.1_01318
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	262209	263969	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	5691	7451	GCA_003130095_1_5_250	GCA_003130095_1_5_250	+	346413	.	PDB:5IKN_F	DNA-polymerase	MKGSIPRTFIDDILTKINIVDLINSRVKLKKAGRDYQACCPFHHEKTPSFTVSDKKQFYHCFGCGAHGNAISFLMEYDKLEFVEAVEELAGFLGLEIPYEKRPHFNDNGKQVGYQTKRNLYELMQEIAKFYQQQLPLNIPAQSYLQQRGLSAEIIERFQIGYVPNAMDTVYRQFGKTREEQQKLFDLGMLSRNDRGNVYDKFRNRIMFPIRDRRGRTVAFGGRVLTDEKPKYLNSPETITYHKGSELYGLFEALQADDSPQKLLVVEGYMDVVALAQFGVNYAVASLGTSTTSEQIQLLFRSTEQVICCYDGDRAGRDAAWRALENALPYMEDGRQLKFIFLPDDEDPDSFIRQYGKQGFEEYIEKAQSLSEFLFAHLTPKVDFSSKEGKAKLAALAIPLIKQIPGDVLRLDLRNMLAKKLGILDPTQLESLMPNQAKQENEPVAQGIQFKPTPMRILVALLLQNPELVKFVPDLEPLKNLDEPGYDLFVELTALCREKVGISAGQLLEHWRDTKQQKTLEKLLAWNHLIEDDKIEDTFRETLRYFYLQLVDKRIHWLIAKDRAEGLDLNEKKELSHLLVKKQEKK*	common_virus_hmm	common_virus	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0007	persistent	direct	high	1760	0.999	GCA_003130095.1_01319
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	264045	265910	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	7527	9392	GCA_003130095_1_5_251	GCA_003130095_1_5_251	+	346413	.	PDB:4XLN_L	DNA-directed-RNA-polymerase-subunit	MDQNPQSQLKLLIAQGKEQGYLTYAEVNDSLPEELVDADQIEDIIQMINDMGIQVLETAPDADDLMLNENITDEDVVEEATQVLSSVEAELGRTTDPVRMYMREMGSVELLTREGEIDIAKRIEEGINEVQSAIAAYPEAITYLIEQYDLVESGGVRLADLITGFVDPNVLSESETAELDEFHSEEGEENVAAAEIDDESEDEEDSEESASDDSDSDNSIDPEVAREKFTALRQQHQKTLEIIAKHGRTGKKAKDEIQALSDIFTQFRLVPKQFDTLVLSTRDMMKRVRHQERLIQRLVVDNAKMPKSSFQKSFIGHETSDVWLVKALAAGKSWSEKLAQYEDELRQAIAHLVQIEQDTNLTIGQIREIGERISQGELKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREATPEELAERMGMPEDKIRKVLKIAKEPISMETPIGDDDDSHLGDFIEDSTLELPLDSATAQSLKAATHEVLEGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSETLRSFLDE*	common_virus_hmm	common_virus	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0008	persistent	direct	high	1865	0.999	GCA_003130095.1_01320
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	266312	267508	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	9794	10990	GCA_003130095_1_5_252	GCA_003130095_1_5_252	+	346413	.	PDB:1Z19_B	Integrase	MPKITKPLTNTEVERSKPKDKEYTLTDGYGLFLLVLPTGVKSWRFNYIRPLTKKRTKVSLGTYPALSLAQARSIREEYRSLLAQGIDPQEHKEQEQKAAIEHIENSLLSVANRWKAKKVQKVEAETLKKDWRRMKIYLFPFIGDMPINEILPKVVIEALESLYNQGKGDTLKRTIRLLNEVLNFAVNYGLIAFNPCLRINEVFNFGKSTNNPAITPKELPELIKAVMYSSAAIQTKLLFKFQLLTMVRPAEASNATWSEIDFKKSLWTIPANRMKKRHPFVIPLSSQAMEILNKMKSISVKSEYVFQSWIKSNQPMSSQTINKMLVDLGYKNKQTAHGLRTIGRTYLADQRIDYEVAEMCISHKTGTQTGKIYDRADFLEQRKPVMQLWGDYVEQCER*	common_virus_hmm	common_virus	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0009	persistent	direct	high	1196	0.999	GCA_003130095.1_01322
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	267673	269463	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	11155	12945	GCA_003130095_1_5_253	GCA_003130095_1_5_253	-	346413	.	PFAM:PF04735.11	DNA-helicase	MARLINAPHLADQPKEPYSALIILAGRKAWQAWNKGKDEEWLLLCSLVEGMDARQKPVILAEQQLEDISGIRLADPEQRSIMIFQCGELEQTEITGICHNLAKHTKADHVVLYDGAAQMKENLSGYIQRLRTDKSAVEIADKIAQPPKLKEKDGTNVKARAFVKWLNLDIAQHSLDKELYHYTGANWEILPRSELEVKAVQFYDEQEFTYSARSIDSMIDTAKIQAAKMGEQSKELLAFKNGVLNRSTLEFSPHCRENWLTSFIPHDYTNQEENTPHFDNWLNFVADGKEDKKQAILGALYAILTNRHNWQLFFEVTGDGGSGKSVFAQIATMLAGEQNTESGRLVDLDEPRGRENFVNKTLILCPEQSRYGGDGGGLKSISAGDLVNIDPKHKSKFKAVIPAIVLIVNNEPTRFTERNGGIERRRVIFHFDKVVPESKRDPHLMDKIEAEAGGIIYKLIQAFKNPLDAKKALIQQQESAEALEIKMNSDHLTVFCSYFLTSQESNGLGIGNTKTGLPRTHLYPAYLVFTEANNIQNALTLNNFTESLRQGLAQHKNKYPYTRRRITSGAEKGRYITNVHFKDFDEFYNEYIKSNR*	rep_hall_hmm	common_virus	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0010	shell	direct	high	1790	0.999	GCA_003130095.1_01323
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	269447	269890	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	12929	13372	GCA_003130095_1_5_254	GCA_003130095_1_5_254	-	346413	.	.	hypothetical protein	MDLNQKMDYSKLNAIELNAISISHQNMGKPKDEAFNSSFPYTTESILALAEQFIDYPAEYLGGLKILRDELITINKHLLQMAPKPPSLAPEETAAMLSNDELIDGLLKHSLVISLVSTFSYFQEIVAMRINMIENGAVEGVNHGPLN*	.	hypothetical_protein	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0011	shell	direct	high	443	0.998	GCA_003130095.1_01324
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	269890	270114	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	13372	13596	GCA_003130095_1_5_255	GCA_003130095_1_5_255	-	346413	.	.	hypothetical protein	MRKLKTKVSKKRPSLFEEERLPDWEQLVKAIKQTEFYLSFAKDYIHNGHLKGATDALKSIKRATTAGLKITGVK*	.	hypothetical_protein	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0012	shell	direct	high	224	0.996	GCA_003130095.1_01325
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	270107	270457	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	13589	13939	GCA_003130095_1_5_256	GCA_003130095_1_5_256	-	346413	.	.	hypothetical protein	MKVSNQYKGKLSFNPLHAEYAQISRQFKLIHDSNQRCLEVYPDDFHHKLKMRGECADLVERLKGGGKLFNELAKAADLTKEQTALLKDFNQANGYLISKFAEVVTQIERLQVVANA*	.	hypothetical_protein	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0013	shell	direct	high	350	0.997	GCA_003130095.1_01326
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	270444	270635	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	13926	14117	GCA_003130095_1_5_257	GCA_003130095_1_5_257	-	346413	.	.	hypothetical protein	MKKLDAMDEITKNLAQAEAILLMVDNNTREKALSDSLWAVRDLIVRTKDAVNVLWEGGNNESK*	.	hypothetical_protein	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0014	shell	direct	high	191	0.995	GCA_003130095.1_01327
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	270651	270833	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	14133	14315	GCA_003130095_1_5_258	GCA_003130095_1_5_258	-	346413	.	.	hypothetical protein	MRNEEITKALEGLWEAQAISELISKGNGTIDKVDRTTYEAAFRAVSKLILTSVMSLEEEL*	.	hypothetical_protein	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0015	shell	direct	high	182	0.995	GCA_003130095.1_01328
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	270826	271425	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	14308	14907	GCA_003130095_1_5_259	GCA_003130095_1_5_259	-	346413	.	NF033153	"host cell division inhibitor Icd domain. Icd from temperate phage P1 inhibits cell division in its host. Homologous sequence is found in many other proteins, often as the C-terminal region of what appears to be a much larger protein. Putative phage proteins that contain this domain may be designated ""host cell division inhibitor Icd-like protein"". See PMID: 8491703 for a description of Icd. Many proteins with this domain also have the Ash domain described by pfam10554, which also occurs in phage."	MNLNHVNYKQYENNYNSFHFTKCGQICEYIHTLAKSKVSREKLNIKLLANDSTPFNRAFFVRDIRTPKEFADFVLSNLKIHSMVERNRPSLTGCFPITTVSHPVTFYRPTVRSLAVDSKNQLLESTQMYQFIFAAIRRTDLTNHIQKIRITADTEQAARAKFARDFVLVLTGKINLQNTVKNDRAFSAISRDSMEVAHA*	mmseqs_cdd	nonviral_gene	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0016	shell	direct	high	599	0.998	GCA_003130095.1_01329
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	271624	271935	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	15106	15417	GCA_003130095_1_5_260	GCA_003130095_1_5_260	-	346413	.	.	hypothetical protein	MNEARKPTQFLKVLHRLILSSISGIDGYSMGMTSARNYISELERNHLTGKVKRTTEKTADGMGQYYRYEIADAEQLKQVIAIYKAKGGELTAHEEQQAYFRFR*	.	hypothetical_protein	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0017	shell	direct	high	311	0.997	GCA_003130095.1_01331
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	271947	272150	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	15429	15632	GCA_003130095_1_5_261	GCA_003130095_1_5_261	-	346413	.	COG3311	Predicted DNA-binding transcriptional regulator AlpA [Transcription, Mobilome: prophages, transposons]. 	MSQSQTQSKKLITGADVCRRVSFGRTKLNELVKAKQFPQPIRFSQNFVRWDLEEVNAWIEEQKAARA*	mmseqs_cdd	nonviral_gene	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0018	shell	direct	high	203	0.995	GCA_003130095.1_01332
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	272295	273251	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	15777	16733	GCA_003130095_1_5_262	GCA_003130095_1_5_262	-	346413	.	.	hypothetical protein	MSNQKFLPKKAYSITDAVKYISLNYNINISEYDLLEYIQSGDLQASIHLEGRINKIDSVNKREIPHNKTLNIRNEEIFLQFSQGETKSEIEHNENFEIYRIKLNNIYFSIDVILNDAYYLPDYFSKNDEIKLYTGELDRFRNLVFNGYFPLSKEVFEPYNTLELIERGYIEEFPDIYVNTFSGLYLHLPIYENRTELYLDDIYIIHEDMISFLKLFSVIDESYEQQEEIQKLKNQISDKNKQIEEFQKEIGESSREISGKSETSYLNLIQALKELCLSENSFGNQEELIVYISEQYQGYTGLSEANLRDKFSKANKIK*	.	hypothetical_protein	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0019	shell	direct	high	956	0.999	GCA_003130095.1_01333
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	273396	273956	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	16878	17438	GCA_003130095_1_5_263	GCA_003130095_1_5_263	-	346413	.	.	hypothetical protein	MDNLLLTFLSILCVVFLIEWVYKKIILPLIIYKYQKKHSAIQKQLSAILVEKDVDVKAKEVLEKLLRSHFSRIALDNIKIRWKFIRYINSNEEARFAYRKNIDENQNILENATLNEFHNIFDSSANIVHAAFIFNSLLDIIIMVFFLIFTIPILLALGLLGKVPKIFKPLFNINKPDLSTIDSKRA*	.	hypothetical_protein	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0020	shell	direct	high	560	0.998	GCA_003130095.1_01335
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	273949	274221	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	17431	17703	GCA_003130095_1_5_264	GCA_003130095_1_5_264	-	346413	.	.	hypothetical protein	MEHFYNCISSVFTKLAEKPLQSMFSLILLLIFAQSSQEQKDQILQVILEYIQEPTKSYMAYIILVGLLLASVACNVRLYIKLKITEDKDG*	.	hypothetical_protein	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0021	shell	direct	high	272	0.996	GCA_003130095.1_01336
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	274503	276122	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	17985	19604	GCA_003130095_1_5_265	GCA_003130095_1_5_265	-	346413	.	CDD:COG4626	Large-Terminase	MACRKIKQAVARYFDDLANPAYFFDESAVNKFLAFSRLCPHVKGHLRGQPIELSDWQTFLFANLLGFKRTNTGLRKYRSAYIQVARKNAKSTVAAVLANWFLLMESGQQDIYTAAVSRDQARIVFDDARQMCLLSPPLRKRLNIQQHKLINPKSNSLMRPLAAKSSTIEGTNPSLAIVDEYHLHTDNSVYSALELGQGARPEGLLFAITTAGSNVISACKQHYDYCAQILEGNEQNDSLFVLIFELDEESEIDNPENWVKANPNIGKSIPYLDFENTIKKARGIPSEWVEMLTKRFNVWCQGTTPWLGEGNWAQCARDYTESDLLHQDCYLGLDLSSTNDLTSLCYTFPQGKKVRLITRHYIPEFQLNNVANKNRAIYRNWVRQGWLIATEGDCIDYDKIRDDILKDAENFNIKMIGFDVWNATHLRTQLQAAGLEVEPFPQTYQRFSPVAKSAEVLINRQVIEHHGDPVLSWALSNVVMETDANANIKPNKKKAANKIDPAVAFLMSFGTYQLEYGDLIFELSEEHKQALEQFNGIDL*	hallmark_hmm	common_virus	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0022	shell	direct	high	1619	0.999	GCA_003130095.1_01337
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	276179	276547	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	19661	20029	GCA_003130095_1_5_266	GCA_003130095_1_5_266	-	346413	.	CDD:COG3747	Small-Terminase	MSKRKSYKTPDFLDDIAKSQWKARIKQLSERGDIKPEDLTNLEIYCENYAIWRHSVADLAKNGFIIVNSQGTQSRNPALSAKADAEKVMIKMSSLLGFDPVSRRKNPVETDVTDMLDEILTM*	hallmark_hmm	common_virus	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0023	shell	direct	high	368	0.997	GCA_003130095.1_01338
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	276768	277124	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	20250	20606	GCA_003130095_1_5_267	GCA_003130095_1_5_267	-	346413	.	PDB:5H0M_A	HNH-endonuclease	MPYQSLRRCSYPGCRNKVKSGRCEEHKPKDNRPNSSARGYDHKWSKYRAQYLKHHPLCVMCLEQGKYTPATVIDHIKPVENGQADPLFWVASNHQPLCRDCHSYKTRVIDQRGFGAKK*	common_virus_hmm	common_virus	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0024	.	unmatched_CDS	none	0	0	.
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	277139	277453	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	20621	20935	GCA_003130095_1_5_268	GCA_003130095_1_5_268	-	346413	.	CDD:TIGR01560	uncharacterized-phage-protein-(possible-DNA-packaging)	MVEINLTIDEIKAHLNLDHDLDDELLEAYKVATLEVCQKHIGKTFGEEETEKTIPFTPAIKIGCLMYIAYLYTNREAVTDLANLKPAPMTISALWEVYREPCAY*	hallmark_hmm	common_virus	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0025	shell	direct	high	314	0.997	GCA_003130095.1_01339
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	277440	277784	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	20922	21266	GCA_003130095_1_5_269	GCA_003130095_1_5_269	-	346413	.	PDB:2KZ4_A	Head-tail-adaptor	MAIMIKAGKYNKVISLQKQVNEQNDYGGIVSKWKTVANIRAAVEPLQGREFFSGAVPLNENTVRIRIRYGTNVDNTMRVKYGNRSLEIINIIDSKEAHKELQLICKELTGNGGN*	hallmark_hmm	common_virus	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0026	shell	direct	high	344	0.997	GCA_003130095.1_01340
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	277768	279000	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	21250	22482	GCA_003130095_1_5_270	GCA_003130095_1_5_270	-	346413	.	CDD:COG4695	Portal-protein	MWNPFRRKEQRSSPMAINELLSYLGVSNTGAGEFVSPNTAESLPAVMSAVTVISEAVASMPCYLYQLKDDGRERVYRHPVDYLLNEMPNRSQTPYQFKYTMMRHCLLNGNAYAVIEWNNKGEPISLTPYEPSAVNIYCKVGGEYIYQITDLDGNTKNYLQDEILHLRHSSLDGFMGRSPITICRETVGLGIAQQKHGSAVMKNGLMASGLITTAEWLDDAKAQKAVKALERYKGAKNAGKTPILEGSMEYKQLGMTNQDAEWLASRTFTISDIARIYNISPIFLQDYSNSSYSNFSEASRAFLSQTLRPWLTNFEQQLKDALMIDLGSNSKKRYLIEFDTSDLLRTSQSERFKSYDVAIKAGVMCPNEVRRREGLPPYEGGEEFSQAWKQTVEVKRGDEQEPGVSNGNHD*	hallmark_hmm	common_virus	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0027	shell	direct	high	1232	0.999	GCA_003130095.1_01341
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	279002	279568	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	22484	23050	GCA_003130095_1_5_271	GCA_003130095_1_5_271	-	346413	.	CDD:COG3740	head-maturation-protease	MNKEFEIRSSEIAADSENKKLVGYVVKWDSPSEVLYCDFVEQFSANAFSESLSSGADVRALFEHDHSKLLGRTRAGTLKLEEDAIGLRFELMPPDTTLGRDLLVSVERGDISGMSFGFWAKEETWNFDVEPCQRTVAKAELFEITVTSIPAYPESSVEIAKRSMATAKGKTQGKSTALLKQWLDVVEA*	hallmark_hmm	common_virus	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0028	shell	direct	high	566	0.998	GCA_003130095.1_01342
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	CDS	279622	280809	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	23104	24291	GCA_003130095_1_5_272	GCA_003130095_1_5_272	-	346413	.	CDD:COG4653	Major-Capsid-protein	MFKKLLELRQQKAEKVAAMRAMLDKAEQENRSLNDAENVDFEKLKDLVKQLSDEIARYETVADEERNIADKGKPVETRGKTFSNDELRHYIKTGELRNLSTTGQEDGGYTVIPQLDKDVMKRLTDDSVMRQICNVVRLPVGAKEYKKLVSAGGAVVAHGEEGQARNGTATPKLHEVTIALNPIYAYPKTTQEILDFSSIDVLGWLTDEITESFTETEETDLTGGDGTKKSKGFLSYERSTEADKVRAFGKLQKLEVAGADKITADTLIDLFYTLHSKYRKNAVWVMSSTIAAALQKLKNKNGDFIWRDGLTVDAPSTLLGRPVYFLETMPASGANKPVVAFGDFKRGYFIVDHETGVRTRPDNITEPGFYKVHTDKYLGDGVVDSNAIKFIEVTA*	hallmark_hmm	common_virus	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_CDS_0029	shell	direct	high	1187	0.999	GCA_003130095.1_01343
GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote	cenote	tRNA	59717	59802	GCA_003130095.1	NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095.1_NRCX01000001.1	GCA_003130095.1|NRCX01000001.1	GCA_003130095_1_3	GCA_003130095_1_3@C1	3485	3570	tRNA-Leu	tRNA-Leu	+	736964	.	tRNAscan-SE score: 56.1	Leu	NA	tRNAscan-SE	.	C1	41174	56233	97407	GCA_003130095.1|NRCX01000001.1@region_56234_97407@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote	cenote	tRNA	266037	266113	GCA_003130095.1	NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095.1_NRCX01000003.1	GCA_003130095.1|NRCX01000003.1	GCA_003130095_1_5	GCA_003130095_1_5@C19	9519	9595	tRNA-Met	tRNA-Met	+	346413	.	tRNAscan-SE score: 85.3	Met	NA	tRNAscan-SE	.	C19	24291	256519	280810	GCA_003130095.1|NRCX01000003.1@region_256520_280810@tool_cenote_tRNA_0001	.	.	.	.	.	.