core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	669573	670760	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	1	1188	GCA_003252805_1_1_570	GCA_003252805_1_1_570	+	830326	.	CDD:COG4653	Major-Capsid-protein	MFKKLLELRQQKAEKVAAMRAMLDKAEQENRSLTETENVDFEKLKDLVKQLSDEIARYETVADEERNIADKGKPVETRGKTFSNDELRHYIKTGELRNLSTTGQEDGGYTVIPQLDKDVMKRLTDDSVMRQICNVVRLPVGAKEYKKLVSAGGAVVAHGEEGQARNGTATPKLHEVTIALNPIYAYPKTTQEILDFSSIDVLGWLTDEISESFTETEETDLTDGDGTKKSKGFLSYERSTEADKVRAFGKLQKLDVAGADKITADTLIDLFYTLHSKYRKNAVWVMSSTIAAALQKLKNKNGDFIWRDGLTVDAPSTLLGRPVYFLETMPASGANKPVVAFGDFKRGYFIVDHETGVRTRPDNITEPGFYKVHTDKYLGGGVVDSNAIKFIEVTA*	hallmark_hmm	common_virus	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0001	persistent	direct	high	1187	0.999	GCA_003252805.1_00596
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	670814	671380	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	1242	1808	GCA_003252805_1_1_571	GCA_003252805_1_1_571	+	830326	.	CDD:COG3740	head-maturation-protease	MNKEFEIRSSEITADSENKKLVGYVVKWNSPSEVLYCDFVEQFSANAFSESLSSGADVRALFEHDHTKLLGRTRAGTLKLEEDAIGLRFELMPPDTTLGRDLLVSVERGDISGMSFGFWAKEETWNFDVEPCQRTVAKAELFEITVTSIPAYPESSVEIAKRSMATAKGKTQRKSTALLKQWLDVAEA*	hallmark_hmm	common_virus	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0002	persistent	direct	high	566	0.998	GCA_003252805.1_00597
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	671382	672614	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	1810	3042	GCA_003252805_1_1_572	GCA_003252805_1_1_572	+	830326	.	CDD:COG4695	Portal-protein	MWNPFRRKEQRSAPMAINELLSYLGVSNTGAGEFVSPNTAESLPAVMSAVTVISEAVASMPCYLYQLKDDGRERVYRHPVDYLLNEMPNRSQTPYQFKYTMMRHCLLNGNAYAVIEWNNKGEPISLTPYEPSAVNIYRKVGGEYIYQITDLDGNTKNYLQDEILHLRHSSLDGFMGRSPITICRETVGLGIAQQKHGSAMMKNGLMASGLITTAEWLDEAKAQKAVKALERYKGAKNAGKTPILEGSMEYKQLGMTNQDAEWLASRTFTISDIARIYNISPIFLQDYSNSSYSNFSEASRAFLSQTLRPWLTNFEQQLKDALMIDLGSNSKKRYLIEFDTSDLLRTSQSERFKSYDVAIKAGVMCPNEVRRREGLSPYEGGEEFSQAWKQTVEVKRGDEQESGVSDGNHD*	hallmark_hmm	common_virus	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0003	persistent	direct	high	1232	0.999	GCA_003252805.1_00598
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	672598	672942	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	3026	3370	GCA_003252805_1_1_573	GCA_003252805_1_1_573	+	830326	.	PDB:2KZ4_A	Head-tail-adaptor	MAIMIKAGKYNKVISLQKQVNEQNDYGGIVSKWKTVANIRAAVEPLQGREFFSGAVPLNENTVRIRIRYGTNVDNTMRVKYGNRSLEIINIIDSKEAHKELQLICKELTGNGGN*	hallmark_hmm	common_virus	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0004	shell	direct	high	344	0.997	GCA_003252805.1_00599
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	672929	673243	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	3357	3671	GCA_003252805_1_1_574	GCA_003252805_1_1_574	+	830326	.	CDD:TIGR01560	uncharacterized-phage-protein-(possible-DNA-packaging)	MAEINLTIDEIKAHLNLDHDLDDELLEAYKVAALEVCQKHIGKTFGEEETEKTIPFTPAIKIGCLMYIAYLYTNREAVTDLANLKPAPMTISALWEVYREPCAY*	hallmark_hmm	common_virus	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0005	persistent	direct	high	314	0.997	GCA_003252805.1_00600
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	673258	673620	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	3686	4048	GCA_003252805_1_1_575	GCA_003252805_1_1_575	+	830326	.	PDB:5H0M_A	HNH-endonuclease	MPYQPLRRCSYPECRNKVKSGRCEEHKPKDNRPNSSARGYDHKWSKYREQYLKHHPLCVMCLEQGKYTPATVIDHIKPVENGQADPLFWVASNHQPLCRDCHSYKTRVIDQRGFGAKKID*	common_virus_hmm	common_virus	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0006	shell	direct	high	362	0.997	GCA_003252805.1_00601
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	673722	674090	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	4150	4518	GCA_003252805_1_1_576	GCA_003252805_1_1_576	+	830326	.	CDD:COG3747	Small-Terminase	MSKRRNYKTPDFLDGIAKTQWKSRIKQLSERGDIKAEDLTNLEIYCENYAIWRHSVADLAKNGFIIVNSQGTQSRNPALSAKADAEKVMIKMSSLLGFDPVSRRKNPIEVDENDILDEILTM*	hallmark_hmm	common_virus	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0007	persistent	direct	high	368	0.997	GCA_003252805.1_00602
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	674098	675765	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	4526	6193	GCA_003252805_1_1_577	GCA_003252805_1_1_577	+	830326	.	CDD:COG4626	Large-Terminase	MEIWQAYAEKIKSGELVACKKIKQAVERYFNDLNNPDYFFDKSAVDKFLAFSKLCPHVKGHLRGQPIILSDWQVFLFANILGFKRKDTGLRKYRSAYVQVARKNAKSTIAAVLANWFLVMEGGQQDIYTAAVSRDQARIVFDDARQMCLLSAPLKKRLNIQQHKLINPKNNSIMRPLAAKSSTIEGTNPSLAIVDEYHLHADNSVYSALELGQGARPEGLLFAITTAGSNVISACKQHYDYCAQILEGNEQNESLFVLIFELDEENEIDNQENWIKANPNIGKSIPYLDFENTIKKARGIPSEWVEMLTKRFNVWCQGSTPWLGDGNWAQCERQYTESDLLHQDCYLGLDLSSTNDLTSLCYTFPHGNKVRLLTRHYIPEFQLNNVANKNRAMYRNWVRSGWLIATEGDCIDYDKIRDDILKDAERFNIKMTGFDVWNATHLRTQLQAAGLEVEPFPQTYQRFSPVAKSAEVLINRQMIEHNGDPVLAWALSNVVMETDANANIKPNKKKAANKIDPAVAFLMSFGTYQLEYGDLIFELSDEHKHALEQFNGIDL*	hallmark_hmm	common_virus	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0008	persistent	direct	high	1667	0.999	GCA_003252805.1_00603
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	675762	676046	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	6190	6474	GCA_003252805_1_1_578	GCA_003252805_1_1_578	+	830326	.	.	hypothetical protein	MRCKQAKQNLLLSAVNHYKKSTALFTFVSLYDDEEPYPISEVIHALKCKCNAAKREIDSRPNSPNMDALETIYFIAKKQLDTMLKQQKRINAGK*	.	hypothetical_protein	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0009	shell	direct	high	284	0.996	GCA_003252805.1_00604
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	676141	676509	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	6569	6937	GCA_003252805_1_1_579	GCA_003252805_1_1_579	+	830326	.	PFAM:PF16082.4	holin	MGLILVTIKCMVAAFFVVLAIVTFQDWWFIVAFGLAGGLSFTIGWLIYDEYKRRKENKRLVDEREKRKNSWVEHEINRPIIQKTLQKQKENKPLITGTINWIDGSTGKETTLIDISVDIKNK*	phrogs_hmm	hypothetical_protein	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0010	shell	direct	high	368	0.997	GCA_003252805.1_00605
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	676604	677650	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	7032	8078	GCA_003252805_1_1_580	GCA_003252805_1_1_580	+	830326	.	.	hypothetical protein	MKISLPKKNSYSLEELPSFLSKTYNLDIVHDDLITYAREGKLKTCIRLEGNTKGVYAIGRIKMNEEDYLQIHTPPTTIFFNSTAKKFFLPHDLHLEDDNVYFGARLPMLDYFYQQVKDGNRDYNNIVSKIKTNINEFIESSKSLPEYEYQLLLRPKEFNYIFSADFYLPQAIYNTNTKLLKEHIIPINFSDDNFYLLENTNIKTILINLALKLSSAPTLAIHFKQIEVLHSDLMAFLGISDKSQENYSDILQEIERLKSELEEKDKKITELQTALDKMNYPIQLNKFMENDRLALAIQARKEYWANYDPNLNNAPKAEATAKEIQEKYNLSQKQATAIEIVACPINRN*	.	hypothetical_protein	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0011	shell	direct	high	1046	0.999	GCA_003252805.1_00607
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	677807	678010	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	8235	8438	GCA_003252805_1_1_581	GCA_003252805_1_1_581	+	830326	.	COG3311	Predicted DNA-binding transcriptional regulator AlpA [Transcription, Mobilome: prophages, transposons]. 	MSQSQTQSKKLITGADVCQRVSFGRTKLNELVKAKQFPQPIRFSQNFVRWDLEEVNAWIEEQKAARA*	mmseqs_cdd	nonviral_gene	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0012	persistent	direct	high	203	0.995	GCA_003252805.1_00608
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	678022	678333	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	8450	8761	GCA_003252805_1_1_582	GCA_003252805_1_1_582	+	830326	.	.	hypothetical protein	MNEARKPTQFLKVLHRLILSSISGIDGYSMGMTSARNYISELERNHLIGKVKRTTEKTADGMGQYYRYEIADAEQLKQVIAIYKAKGGELTAHEEQQAYFRFR*	.	hypothetical_protein	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0013	persistent	direct	high	311	0.997	GCA_003252805.1_00609
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	678532	679131	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	8960	9559	GCA_003252805_1_1_583	GCA_003252805_1_1_583	+	830326	.	NF033153	"host cell division inhibitor Icd domain. Icd from temperate phage P1 inhibits cell division in its host. Homologous sequence is found in many other proteins, often as the C-terminal region of what appears to be a much larger protein. Putative phage proteins that contain this domain may be designated ""host cell division inhibitor Icd-like protein"". See PMID: 8491703 for a description of Icd. Many proteins with this domain also have the Ash domain described by pfam10554, which also occurs in phage."	MNLNHVNYKQYENNYNTFYFTKCSQICDYVHALAKSKVSRGKLNYLHQANDSTPFNRAFFVRNIRTPQEFADFVLFNLKIHSMVERNRQSLTGCPPDVAVFHPVMLYRPTVESLAVDSENQHQESTQMYQFIFAAIRRTDLSNQIQKIRITADTEQAARAQFARDFVLVLTGKINLQNTVKNDRTFAAISRDSMEVAHA*	mmseqs_cdd	nonviral_gene	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0014	persistent	direct	high	599	0.998	GCA_003252805.1_00610
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	679124	679306	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	9552	9734	GCA_003252805_1_1_584	GCA_003252805_1_1_584	+	830326	.	.	hypothetical protein	MRNEEITKALEGLWEAQAISELISKGDGTIDKVECATYEAAFRAVSKLILTSVMSLEEEL*	.	hypothetical_protein	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0015	persistent	direct	high	182	0.995	GCA_003252805.1_00612
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	679321	679512	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	9749	9940	GCA_003252805_1_1_585	GCA_003252805_1_1_585	+	830326	.	.	hypothetical protein	MKKLDAMDEITKNLAQAEAILLMVDNNTREKALSDSLWAVRDLIVRTKDAVNVLWEGGNNESK*	.	hypothetical_protein	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0016	persistent	direct	high	191	0.995	GCA_003252805.1_00613
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	679499	679849	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	9927	10277	GCA_003252805_1_1_586	GCA_003252805_1_1_586	+	830326	.	.	hypothetical protein	MKVSNQYKGKLSFNPLHAEYAQISRQFKLIHDSNRKCLEVYPDDFHHKLKMRGECVDLVERLKGGGKLFNELAKAADLTKEQTAILKDFNQANGYLISKFAEVVTQIEQLQVVANA*	.	hypothetical_protein	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0017	shell	direct	high	350	0.997	GCA_003252805.1_00614
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	679842	680066	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	10270	10494	GCA_003252805_1_1_587	GCA_003252805_1_1_587	+	830326	.	.	hypothetical protein	MRKLKTKVSKKRPSLFEEERLPDWEQLVKAIKQTEFYLSFAKDYIHNGHLKGATDALKSIKRATTAGLKITGVK*	.	hypothetical_protein	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0018	persistent	direct	high	224	0.996	GCA_003252805.1_00615
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	680066	680509	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	10494	10937	GCA_003252805_1_1_588	GCA_003252805_1_1_588	+	830326	.	.	hypothetical protein	MDLNQKMDYSKLNAVELNAISISHQNMGKPKDEAFNSSFPYTTEAILALAEQFIDYPAEYLGGLKILRDELITINKHLLQMAPKPPSLAPEETAAMLSNDELIDGLLKHSLVNSLVSTFSYFQEVVAMRINIIENGAVEGVNHGTLN*	.	hypothetical_protein	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0019	persistent	direct	high	443	0.998	GCA_003252805.1_00616
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	680493	682283	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	10921	12711	GCA_003252805_1_1_589	GCA_003252805_1_1_589	+	830326	.	PFAM:PF04735.11	DNA-helicase	MARLINAPHLADQPKEPYSALIILAGRKAWQAWNKGKGEEWLLLCSLVEGIDAKQKPVILGEQQLEDISGIKIADSEQHTIMLFQCGELDQTEITGICHNLAKHTKADHVVLYDGAAQMKENLSGYIQRLRTDKSAVEIADKIAPPPKLKEKDGTNVKARAFVKWLNLDIAQHSLDKELYHYTGANWEILPRSELEVKAVQFYDEQEFTYSARSIDSMIDTAKIQAAKMGEQSKELLAFKNGVLNRSTLEFYPHCRENWLTSFIPHDYTNQEENTPHFDNWLNFVADGKEDKKQAILGALYAILTNRHNWQLFFEVTGDGGSGKSVFAQIATMLAGEQNTESGRLVDLDEPRGRENFVNKTLILCPEQSRYGGDGGGLKSISAGDLVNIDPKHKSKFKAVIPAIVLIVNNEPTRFTERNGGIERRRVIFHFDKVVPESKRDPHLMDKIEAEAGGIIYKLIQAFKNPLDAKKALIQQQESAEALEIKMNSDHLTVFCSYFLTSQESNGLGIGNAKTGLPRTHLYPAYLVFTEANNIQNALTLNNFTESLRQGLAQHKNKYPYTRRRITSGAEKGRYITNVHFKDFDKFYNEYIKSNR*	rep_hall_hmm	common_virus	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0020	cloud	direct	high	1790	0.999	GCA_003252805.1_00617
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	682448	683650	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	12876	14078	GCA_003252805_1_1_590	GCA_003252805_1_1_590	-	830326	.	PDB:1Z19_B	Integrase	MPRVKKPLTDTEIKKAKPKEKEYPLSDGNGLILRVKPNGSKIWLFNYYHPVTQKRTNAGLGMYPQIQLAVARAKREEYRALLAQGIDPQEHKKKALEATNEQIKNSFLAVAEKWKKKKVKEVEASTLEKNWRRLELYAFPKFGQIPVTDILPALIIQTLEPLNQQGKGDTLKRTIRLINEILNYAVNYGLIQFNPCLNVNAVFNFGKNENNPTIRPEELPALLKAVRDSRLTLFTRCLIKFQLLTLTRPVESSGAEWSEIDLDNRLWSIPAERMKTRKAHIVPLSTQSIEVLRIMLSYTKNDKYVFQSARTKDKPMNSQSVNKALVDLGYKDKLTGHGLRAIGSTYLNEYEPMISPDVIEACLSHGIKDSVRRAYNRSDYLEQRKPVMQLWGDYVEQCER*	common_virus_hmm	common_virus	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0021	persistent	direct	high	1202	0.999	GCA_003252805.1_00618
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	683956	684306	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	14384	14734	GCA_003252805_1_1_591	GCA_003252805_1_1_591	-	830326	.	COG1314	Preprotein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular transport]. 	MYSALLIIYLVVSIALIAFILLQQGKGADAGASFGGGASGTVFGSAGAGNFLSRTTAVLAIIFFIISIVIGNLNSHKNNVKQGAFDDLSGTAEQIQQQQQKAPAVLDTKNSDIPQQ*	mmseqs_cdd	nonviral_gene	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0022	persistent	direct	high	350	0.997	GCA_003252805.1_00620
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	684467	686389	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	14895	16817	GCA_003252805_1_1_592	GCA_003252805_1_1_592	-	830326	.	PDB:5D5H_A	DNA-topoisomerase-1	MRLFIAEKPSLGRAIADVLPKPHQRGDGFIKCGDDDYVTWCVGHLLEQAEPDAYDAGFKQWRLEDLPIVPQKWLLIPKKETHKQLKTVEKLVHQADILVNAGDPDREGQLLVDEVFSYLNLPAEKRNAIQRCLISDLNPSAVEKAIKKLQPNRDFIPLATSALARARADWLYGINMTRAYTIRGRQAGYNGVLSVGRVQTPVLGLIVRRDLEIENFQPKDFFEVLAWVRDPKEEKTSQKSTALFSALWQPSKACEDYQDDDGRVLSRALAENVVKRITDQPAKVTDYTDKREKETAPLPYSLSALQIDAAKRFGMSAQEVLDTCQRLYETHKLITYPRSDCRYLPKEHFADRMAVMNAISTHLTPFQPLPEIIDPAQKNRCWNDKKVEAHHAIIPTAKNRAVSLTQTEQNIYFLIARQYLMQFCPDAEYRKCKITLDIAGGTFVAQARNLQIAGWKQLWGKEDNDDEQPDALLPVVKKGQILHCEKGDIVSKKTQPPKPFTDATLLSAMTGIARFVQDKELKKILRETDGLGTEATRAGIIELLFKRGFLYKKGRNIHSTEAGRILINALPDVATQPDMTAHWESQLDSISRKQVSYQQFMQNLTQLLPELLHYINFSALRELSRHNQGVKKTASRTKKN*	common_virus_hmm	common_virus	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0023	persistent	direct	high	1922	0.999	GCA_003252805.1_00621
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	686405	687007	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	16833	17435	GCA_003252805_1_1_593	GCA_003252805_1_1_593	-	830326	.	COG0353	Recombinational DNA repair protein RecR [Replication, recombination and repair]. 	MQTSPLLENLIESLRVLPGVGPKSAQRMAYHLLQRNRSGGMRLAQSLTEAMSKIGHCEHCRTFTEEAVCNICNNPRRQNSGLLCVVEMPADILAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQKRLQTESFKEVILATNPTVEGDATANYIAELCLQQKVKVSRIAHGIPVGGELEMVDGTTLTHSFLGRREIG*	mmseqs_cdd	nonviral_gene	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0024	persistent	direct	high	602	0.998	GCA_003252805.1_00622
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	CDS	687094	687423	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	17522	17851	GCA_003252805_1_1_594	GCA_003252805_1_1_594	-	830326	.	TIGR00103	DNA-binding protein, YbaB/EbfC family. The function of this protein is unknown, but it has been expressed and crystallized. Its gene nearly always occurs next to recR and/or dnaX. It is restricted to Bacteria and the plant Arabidopsis. The plant form contains an additional N-terminal region that may serve as a transit peptide and shows a close relationship to the cyanobacterial member, suggesting that it is a chloroplast protein. Members of this family are found in a single copy per bacterial genome, but are broadly distributed. A member is present even in the minimal gene complement of Mycoplasm genitalium. [Unknown function, General]	MFGKGGLGGLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKITVNGAHNCRRVEIDPSLMEDDKEMLEDLIAAAYNDAVRRAEELQKEKMASVTAGMSLPPGFKMPF*	mmseqs_cdd	nonviral_gene	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_CDS_0025	persistent	direct	high	329	0.997	GCA_003252805.1_00623
GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote	cenote	tRNA	683858	683940	GCA_003252805.1	QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805.1_QEPX01000001.1	GCA_003252805.1|QEPX01000001.1	GCA_003252805_1_1	GCA_003252805_1_1@C37	14286	14368	tRNA-Leu	tRNA-Leu	-	830326	.	tRNAscan-SE score: 60.0	Leu	NA	tRNAscan-SE	.	C37	17851	669573	687424	GCA_003252805.1|QEPX01000001.1@region_669574_687424@tool_cenote_tRNA_0001	.	.	.	.	.	.