core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote	cenote	CDS	1	89	GCA_003252955.1	QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955.1_QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955_1_19	GCA_003252955_1_19	1	90	GCA_003252955_1_19_1	GCA_003252955_1_19_1	+	7908	.	.	hypothetical protein	LCEVSDKVNKHYDLMKTQTYSQVTLTSKT*	.	hypothetical_protein	NaN	.	0	7908	GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote	cenote	CDS	812	1969	GCA_003252955.1	QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955.1_QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955_1_19	GCA_003252955_1_19	813	1970	GCA_003252955_1_19_2	GCA_003252955_1_19_2	-	7908	.	PDB:5WQ8_J	Type-II-secretion-system-protein	MKAYRLQSNLKKLALLSGFLPAFCSAVNVDFKLDAVQLPKAVSMIYGDVLEKPYMLDPQLANDERLISFKVTEKQDFEQFVIRYFGNMNIKTYEKNGVVYIAKVEPKIVRQSFVYSPVYRDVDYLAEFLKHNSADEKSVSASGDKLVYYGTGEEIARVKSVLKGVDVPGREIVVTGYVFEVQTEEKEGSGINLLAKLLSGKLGINIGVKQNYENFITVNTGNLDAMIELFRTDRRFQVVSSPTIRVKSGSKGNFSVGSDVPILGAVTYDRDGRPVQSIEYRSSGVIFDILPTIKADNIDIKIQQQLSNFVKTETGVNQSPTLIKRDIVTDVSVKNGDVIVLGGLAQNKLTDGETGFSFLPKGFLSGKSKSDEKTDIVILLQVKLI*	common_virus_hmm	common_virus	NaN	.	0	7908	GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote_CDS_0002	cloud	direct	high	1157	0.999	GCA_003252955.1_02193
GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote	cenote	CDS	1944	3062	GCA_003252955.1	QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955.1_QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955_1_19	GCA_003252955_1_19	1945	3063	GCA_003252955_1_19_3	GCA_003252955_1_19_3	-	7908	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MAISAYVGIPGSGKSYEVVLSVILENYLKGRRIVTNIEGISDERIRDYCLNKKGVKEQELGLLIKVSDEDCQRDDFFPYKGSNGNTICKAGDLICIDEVWRIFPTNEIKSNHRSFIAEHRHFTDEETGVCCDLVVINQSVTGIPRFIKDRIETTFLMSRLVALGLGKRYRVNVYTGVKVNKQGLVAQYQNKFNEDIFKLYKSFDGVNGKQSVVDDRQNFFKSGMFRLMVIFAVFALGLSYYMMQGVFTQDTEQNQEQALNNQQLKTQETTVKNQVKSDDFGEFSDVYQSATAGDKQAKTITEKLSVNWRITGELSKNNQLFVVLVDRKNNLRMEPRRLFNGEGRELKGVIGGEIVSYYSGVGEQNESISFTK*	hallmark_hmm	common_virus	NaN	.	0	7908	GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote_CDS_0003	cloud	direct	high	1118	0.999	GCA_003252955.1_02194
GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote	cenote	CDS	3070	3375	GCA_003252955.1	QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955.1_QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955_1_19	GCA_003252955_1_19	3071	3376	GCA_003252955_1_19_4	GCA_003252955_1_19_4	-	7908	.	PFAM:PF10734.8	Minor-Head-Virion-Protein	MVKIILGWFGKNFGIIFKWLFDAGVLKFVIFGLIYLAFQEIVPLLLDIFIGDKFNEIKSLLGQVPENVAYFLKMFRVDFAFKVVLSAYLTRFMIRRIPVIG*	hallmark_hmm	common_virus	NaN	.	0	7908	GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote_CDS_0004	cloud	direct	high	305	0.997	GCA_003252955.1_02195
GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote	cenote	CDS	3390	4541	GCA_003252955.1	QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955.1_QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955_1_19	GCA_003252955_1_19	3391	4542	GCA_003252955_1_19_5	GCA_003252955_1_19_5	-	7908	.	.	hypothetical protein	MGYVMRLCCGSRYFWLVFVLFSGYCFSVPSCISWSTIPKNSNPTKSSNAIKTSCKLISYGSGHEICGDSSKEVNFQTIDSDDTGLTFHHGFYDPNFFHDGYWQWDEKFKFGDNLKGVYRNALLPNLVKALKNDNCDIANAILDAMQNPNIIKNGDSEFLGFKNGEDKCVVLSDGKTTCKGPSYKTSQDKDGKTRLDIDPNGGWERSLDDYSSSKPNDNINNPGSSDNKNKGDGSGINEHRGNGSSSSGSGQANNGNNKPGDKGTDKNDGKPGNGGNGGSSIGNGKGDGEGDDEGKDIGDVKMPKLQTPDLEKTLNAAKKQVEDKVGSGYELSKGQCEPISISVFSHTETIDLHCQVFEKLASTAGPAFTLLWTTLGVLIILSA*	.	hypothetical_protein	NaN	.	0	7908	GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote_CDS_0005	cloud	direct	moderate	1140	0.99	GCA_003252955.1_02196
GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote	cenote	CDS	4651	4872	GCA_003252955.1	QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955.1_QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955_1_19	GCA_003252955_1_19	4652	4873	GCA_003252955_1_19_6	GCA_003252955_1_19_6	-	7908	.	PFAM:PF10389.8	virion-structural-protein	MSEQLKKLAAKAVALGTLTMASASSFAAGYADIGANIDFTDGKTAVTAVVIGIAGFLIFGMVGRYILSFFKRV*	phrogs_hmm	hypothetical_protein	NaN	.	0	7908	GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote_CDS_0006	cloud	direct	high	221	0.995	GCA_003252955.1_02197
GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote	cenote	CDS	4903	5148	GCA_003252955.1	QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955.1_QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955_1_19	GCA_003252955_1_19	4904	5149	GCA_003252955_1_19_7	GCA_003252955_1_19_7	-	7908	.	.	hypothetical protein	MSEQTLIRINAQLCINDKGCSDVNLNMTQAEAFKIYQLMPSSKVESPDYSQYMQFWALSFSATLSLWLTAFVGGRILRFFR*	.	hypothetical_protein	NaN	.	0	7908	GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote_CDS_0007	.	unmatched_CDS	none	0	0	.
GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote	cenote	CDS	5337	5666	GCA_003252955.1	QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955.1_QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955_1_19	GCA_003252955_1_19	5338	5667	GCA_003252955_1_19_8	GCA_003252955_1_19_8	-	7908	.	pfam17426	Putative Gamma DNA binding protein G5P. This domain family is found in Gammaproteobacterial proteins. Members of the family are predicted to be G5P DNA binding proteins. Homologous proteins are found in pfam02303	MKQGFMIIGKCLGSRQLQNVDKDTGEVRFKNEIGIGLTRPDGFGGSTQIEIMVAVRKKELFTNDLITHVKSLIGKQVMISVFPTAWQFNGKTGITYLYTDESSIEEVKI*	mmseqs_cdd	nonviral_gene	NaN	.	0	7908	GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote_CDS_0008	cloud	direct	high	329	0.997	GCA_003252955.1_02198
GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote	cenote	CDS	5669	5866	GCA_003252955.1	QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955.1_QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955_1_19	GCA_003252955_1_19	5670	5867	GCA_003252955_1_19_9	GCA_003252955_1_19_9	-	7908	.	.	hypothetical protein	MNLTDFSIWINLYKPHIYYDDLWLEIQIIFELPDKTVRIFAGDTLEEAFNLAVKDYPLHPLTKGN*	.	hypothetical_protein	NaN	.	0	7908	GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote_CDS_0009	cloud	direct	high	197	0.995	GCA_003252955.1_02199
GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote	cenote	CDS	5875	6999	GCA_003252955.1	QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955.1_QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955_1_19	GCA_003252955_1_19	5876	7000	GCA_003252955_1_19_10	GCA_003252955_1_19_10	-	7908	.	pfam05155	Phage X family. This family is the product of Gene X. The function of this protein is unknown.	MFFDWLKIEQDFNYQLPLIGDFGYVGIHIDTGEQQEGIRIPAFKHEGSFCDSVLIKINGSVLTMSGNPSRWGRTENLFGLPTVEACVNCFNSILENLGLPAFTKCTQVFYGQSEDGTKVKKFSDGAIIKELHITENRAVGRNNVEHYLSGLSTLNYRNSVARLHTNGETVDWLSKLGNANLIYPSVYNKAYELELHSLNKIKNKFGEQSSEYKHLLKVIDFCKQNGVARFEQKLKSRYLQKENLNFYGLSDYSRLKKLSDEFINIDEKLKVTAMDFETISETLLNNGVVDTVRSANTTAMYALQWSHGQVFDLSKAHIKRHRAKLRKIGIDIGRKCDLSKFSPVKVVSTREINVSNLIMPNWYKLPNYHLKLAA*	mmseqs_cdd	common_virus	NaN	.	0	7908	GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote_CDS_0010	cloud	direct	high	1124	0.999	GCA_003252955.1_02200
GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote	cenote	CDS	7129	7314	GCA_003252955.1	QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955.1_QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955_1_19	GCA_003252955_1_19	7130	7315	GCA_003252955_1_19_11	GCA_003252955_1_19_11	+	7908	.	.	hypothetical protein	MRKDTSVRINGQRRNKLELLAIEISHKSGRLTKMSDIVNHLIDNYMNEAKQDLIHQQSEKN*	.	hypothetical_protein	NaN	.	0	7908	GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote_CDS_0011	cloud	direct	high	185	0.995	GCA_003252955.1_02201
GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote	cenote	CDS	7510	7800	GCA_003252955.1	QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955.1_QEPU01000019.1	GCA_003252955.1|QEPU01000019.1	GCA_003252955_1_19	GCA_003252955_1_19	7511	7801	GCA_003252955_1_19_12	GCA_003252955_1_19_12	-	7908	.	.	hypothetical protein	MSDITLKDITPIHFLNAVRLLKSDDYRIYCTLDSVEIRFSQKRFLTPAESDERFDFCYALKMFLDELKNSTVPIDKEDFLKAYGPVYCHGRRYFKR*	.	hypothetical_protein	NaN	.	0	7908	GCA_003252955.1|QEPU01000019.1@region_1_7908@tool_cenote_CDS_0012	cloud	direct	high	290	0.997	GCA_003252955.1_02202