core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	22661	23188	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	1	528	GCA_003339975_1_6_23	GCA_003339975_1_6_23	+	89217	.	PF11188.8	Protein of unknown function (DUF2975)	MPDTDVETTERLLVKTRKICRLIGLAMIVVFVFLCIWWLASSGVMVCSLFDPGFSDNPVNGFTLVNYVLCGIAMAAICITLIKIFSDTSKGHSPFTMLQVKRLRLIAISLLAYGVLEFVMTCSAAFMNQGWAGSSAGSVSPTLNFFPLVAAAVVFAFSFVFKYGILLQKLSDETL*	hhsuite_tools	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	23198	23446	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	538	786	GCA_003339975_1_6_24	GCA_003339975_1_6_24	+	89217	.	COG3655	DNA-binding transcriptional regulator, XRE family  [Transcription]. 	MPIVLHLDEIMADRHISLNELADKVGITNVNLSRIKTGKIRAVRFSTLDMLCEVLKCQPGDILKHVSADEANAMFIDENAEL*	mmseqs_cdd	nonviral_gene	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0002	persistent	direct	high	248	0.996	GCA_003339975.1_00656
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	23368	23574	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	708	914	GCA_003339975_1_6_25	GCA_003339975_1_6_25	-	89217	.	.	hypothetical protein	MLSQLSYIPTGSALIARGNILPVLEAFVKWQLQTICKMHTNGIYSSAFSSMNMAFASSAETCLRISPG*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0003	persistent	ambiguous	low	80	0.386	GCA_003339975.1_00656
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	23742	24581	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	1082	1921	GCA_003339975_1_6_26	GCA_003339975_1_6_26	-	89217	.	PFAM:PF12671.6	endolysin	MANSAADVIRIAAAEVGYSRWSDPEQGTKYGRWYAEKTGSGYYGTNGVPYCAMFVSWVMAQAGARCEGIPGAYCPWILNAGRKAGKLVSAANAKPGDVVLFDWEGDGTSDHVGFVERNSGVLHTIEGNTNNGAVARRTRSYGTVCGVIRPDYDGTTASAPENGVGALEVDGVWGPATTRAVQAALGTTQDGIVSDQYAGYRAGNPGLSSASWEWHSRTSLGSDMVRALQRKIGATVDGVAGPKTFRALQTCLGTTQDGRISNPSTCVKALQQRLNAGTF*	phrogs_hmm	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0004	shell	direct	high	839	0.999	GCA_003339975.1_00658
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	24571	24690	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	1911	2030	GCA_003339975_1_6_27	GCA_003339975_1_6_27	-	89217	.	.	hypothetical protein	MDEEKKTAEDEATMLQKAVEAGRTDGDGPDDVEVADDGE*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0005	shell	direct	high	119	0.992	GCA_003339975.1_00659
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	24694	25359	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	2034	2699	GCA_003339975_1_6_28	GCA_003339975_1_6_28	-	89217	.	COG4990	Predicted cysteine peptidase, C39 family  [General function prediction only]. 	MRKTRNAVRALLAALAALIVVFVALVAASQPSGRAEEPSEVLEASEDYMVTAADMQLPELPTGCEATAIATLLRLNGVDASKTDIADVMPKSDTDFVHSFLGDPYSKNGGCCMSLCAVETMRKFLVGCSLIGYETEGYDLADLPTPCVVWVTIDLAEPQGPLKTQGAYSMFYPSHCLTVLGVDDDTVRTIDPLKGYEEYPRDKFEHVYSVLGKQAVYIGKE*	mmseqs_cdd	nonviral_gene	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0006	shell	direct	high	665	0.998	GCA_003339975.1_00660
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	25359	25568	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	2699	2908	GCA_003339975_1_6_29	GCA_003339975_1_6_29	-	89217	.	.	hypothetical protein	MPELMKWFLNDNSREAKLARTVAQGVVGVAAAAVTYYAAMAPEFVAVVVCPASMAVLSPIMDYLGERMA*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0007	shell	direct	high	209	0.995	GCA_003339975.1_00661
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	25578	25919	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	2918	3259	GCA_003339975_1_6_30	GCA_003339975_1_6_30	-	89217	.	.	hypothetical protein	MDAFLNSPEAMKELGFFWTFIALVVASCIYFGPDIKALIKGIPARRSKSDQMTENNTEALHLCRAALDNNTEALRSNKEDRDTTTAILIEHDRKSEIRFEHQNETLARIESKL*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0008	shell	direct	high	341	0.997	GCA_003339975.1_00662
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	26000	26218	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	3340	3558	GCA_003339975_1_6_31	GCA_003339975_1_6_31	-	89217	.	.	hypothetical protein	MERTEIEGAINAYKNLLQQTDYMAIKHADGALTPEEYGPMRAKREEWREAINQCEAQLATLDEQEPAEQGAI*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0009	shell	direct	high	218	0.995	GCA_003339975.1_00663
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	26291	27433	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	3631	4773	GCA_003339975_1_6_32	GCA_003339975_1_6_32	-	89217	.	TIGR04416	group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other]	MNSDERRAARRARREAERARRKAERNAGCDLEAVADLNALYKAAKQAARGVAWKASVQRYQADVLRNVMKARRDLLEGRDVCRGFIRFDLWERGKLRHISAVRFSERVIQKSLTQNALVPAIAPTLTYDNSANLKGKGTDFAIARMKKQLARFYRKHGADGYILLVDFSDYFARISHGPAKAIVAGALEDRRLVALEHRFIDAQGDIGLGLGSEPNQILAVAFPSYIDHFAAEMCGLEATGRYMDDSYYIHESKAYLEVVLMLIEQKCDQCGISINRKKTRIVKLSRGFTFLKKKISFGENGRIVVRPSRESITRERRKLKKQRKLVDLGMMTPEQVERSYQSWRGGMKKLDAHRTVLSMDALYKDLFSNPENASRGGCH*	mmseqs_cdd	nonviral_gene	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0010	shell	direct	high	1142	0.999	GCA_003339975.1_00664
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	27801	28271	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	5141	5611	GCA_003339975_1_6_33	GCA_003339975_1_6_33	-	89217	.	.	hypothetical protein	MGGVYERTRKVSEFEFYNTAIRIRVEVNRLMASPAVVPKAYRLLNAVPTVETARAIVYNINRADQFYPNSAANVLERRKYLSLAIADCEQLCQDMQCLIDIGLPVNVGKFEAVVSMIEQEIALLKGARKNVRIVGKRSAEEMLADAEAEVERIRAL*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0011	shell	direct	high	470	0.998	GCA_003339975.1_00666
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	28368	29258	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	5708	6598	GCA_003339975_1_6_34	GCA_003339975_1_6_34	-	89217	.	.	hypothetical protein	MTDISKLGVGGTTYTIKDESARTSSQNAVNASEYARQIDTDTYAGQSLAALFAGEIANYANVWAWLRARVRAGNFAGMRTKDYIDLTLTNGNNVRYRIGDFDPYLYCGDASKGHHVVMVPSAPVAVTGADAVNGSYIVWNETATNQGTAENAHPYLVSNLHRWETEVYYPMLPQIVRDCILNQRVLLETRYSASGALTASNNWAWADLGPVWSPSEMEVYGCCVWGTPGYSVGFDCQFDIFKKTKDRIQGSRVNWWLRSVSGLSSSYVCYVDSYGIAYYYTPAYAWVRPLPCFLVG*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0012	shell	direct	high	890	0.999	GCA_003339975.1_00667
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	29272	30267	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	6612	7607	GCA_003339975_1_6_35	GCA_003339975_1_6_35	-	89217	.	PF10651.9	BppU N-terminal domain	MAISAQWYTRAVTLDCADGHVGDMYANEGDANGRGIDLSLFDGKEPANTTGMSVYLAWGHEAGGEGLTPFSAVDAAHGRWRVLYPTAMQRSGTVLARIMVYLNGNRAAISGSKNFRIFVDVDPVDGSAALSDNDFSVFQQAVIDLNTAKANADKSTKAANDAAKKATDAAAGANAAEKSAAKATTDANTAAKSADEQADRASKAANDADTATAKAKEATGNAEKATTDAAAATKSATSAASQAQGAASNANAAASNALQIANSIASNGAGDGEVAALKESVDKLGNLAAELSGGYIVMDGTLYAPSAKATASGGTAAMKSASVSGEMASLT*	hhsuite_tools	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0013	shell	direct	high	995	0.999	GCA_003339975.1_00668
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	30257	30445	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	7597	7785	GCA_003339975_1_6_36	GCA_003339975_1_6_36	-	89217	.	.	hypothetical protein	MEEISDGSVPAAVGALNGETEAKLATILDLLETSILPALESVPTKAELAEAIGEVKGMINGN*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0014	shell	direct	high	188	0.995	GCA_003339975.1_00669
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	30458	32650	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	7798	9990	GCA_003339975_1_6_37	GCA_003339975_1_6_37	-	89217	.	PDB:3GS9_A	tail-protein	MQLFVCDRWENYKGAIKTLASCIDTRELNGENSLEIVSFAVLDKGDRIVWRDLKGRWRENIVGSCDESHADTGVERTHYCPNSAIELRGDYIEDKRPGNCSAATALASALSSSRWTVGQVDDLGTAQVNFYHASAWQAIHDVADAFGGELRFDIAVSGSRVVSRRVSLLAHVGADTGKRFTYRKDLSECRRTVSEDDVCTALYGWGASLETTDDDGNLTGGYSRKLSFADANGGVKWIGDDAARERWGRPDGKGGKAHVFGEATFDKCEDPAELLRLTRAELAMRSVPKVSYAASVAATRNAGVGFEGSDEGDAVAVIDGDLGVRVMARITKIKEDQLEEENTTYEFGNFGDLADVFKAQKSAIRESSDSVASYAQNAVNASNAQTNRNMGALGDRFEQEVNEAIKHGDDQVAALKAEMDKIPSDIREQLIDMINEEVNTTGGWVYEEPGKGIFVYNSRPESATKCVKIGGGIVAVANSKYSSGNWYFKTAMTGDGIVADRIYTGRITGGSSYFDLDSGTINMRNGIINITDTNGNTVTVSPSLGFQVRDKNGSMIAGTVIANGKAFFMSRAVGVSSSLYVTTGTTAAGNPGASFVNSQGNYLDVEALRASADPSNRTTGAGMACFNKPFLHTSTYYKQLWLHPPYFDDTYMQQPNEQLFLRCGGNSLGESPLVKLQYSSSQGLFFGSGYVTLKLDDSHYVRISSDGVQCRCGSKGFGWLNGEFHQTLVW*	hallmark_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0015	shell	direct	high	2192	1.0	GCA_003339975.1_00670
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	32651	33352	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	9991	10692	GCA_003339975_1_6_38	GCA_003339975_1_6_38	-	89217	.	PDB:5LY8_A	Distal-Tail-protein	MIFNGCDLSKWFSASFERRISPELDVATRDVPGLAGARFVRAKVKPLVIPVKLRWRARPGASMARLRREVAPVLMASEPRPLVLDDEPDMHYMAIMTTQAALSNLWYTGTCDIEFTAYDPIAYGRDREASLSPAGTFEVGGTWPTEPIVTARPGGSVSFLRLTDNATGRFVQVTAALTSSSVVVFDMAAPNAAVNGANAPVTFESDFFALEPGEASLRLSSGTGTVAWTERWR*	hallmark_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0016	shell	direct	high	701	0.999	GCA_003339975.1_00671
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	33352	35769	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	10692	13109	GCA_003339975_1_6_39	GCA_003339975_1_6_39	-	89217	.	PFAM:PF10145.8	minor-tail-protein	MSDGRVEVEAVLNEAPLKKGVASVKADIKSIEDADRKLDWSGLQKGADAAKQFGDKLTSAGQGLTLKLTTPVLAAGVACATMSMNFDDAMAKVSTIADTTEVPLDDLRGAILKLSDDTGVAASDIADNVYNAISAGQSTGDAVNFVSNATKLATAGFTDSASALDLLSTTMNAYGMEADQVNRVSDVLLMTQNKGKTTVGELSQAMGKVIPTASAYGVSLENLAAAYATTTAKGIATAESTTYLSGMINELGDSGSDVGKIVKNKLGKSFKECMAEGMSLGEVLDACRQYADENGVSLNELFGSAEAGKAALAIAGDGIDGFTANLDAMNNSSGATEEAFGKMQTDSWDLNKAINEIKNVMIEFGGTIVETLRPAIQGFIDGVSAFKDWFQSIGPAGQQAILGIAAVVAAIGPLLIIVGSLAGAVGNIGALIAAAGTAATGAGAAAGGLGASLGALLGPVALVVAAVAGVVAIIVYLWNTSDGFREAVMGAWDAISSKVQEVAAFLMPYIQMAMTAIQQSITTVFEAVMPIIDAAIQFVIATVIPVITSLMDTVGNVFAAILATITGVMTGVSQIISGALSVIQGVFQTVCGFIHGVVTGDFSQMQAGVESIMNGISNIVSGVWNTISSIFSGVINTIVSVVEGGFNAASSAISGVLDGIANTISNVMGGAKNTVSDAISAISGFFSGCKLELPRISLPHFSISGSFSLNPPSIPTIGVDWYATGGIFNAASIIGVGEAGPEAVMPLRGRNMQPFADAVAAGIGGGEARDVEVNIYVSATVREEADIERLSQAIAREFKRKELFA*	hallmark_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0017	shell	direct	high	2417	1.0	GCA_003339975.1_00672
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	35762	36436	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	13102	13776	GCA_003339975_1_6_40	GCA_003339975_1_6_40	-	89217	.	PF06854.11	Bacteriophage Gp15 protein	MRSPSLTRRSEHAGGRLCHWYDWRGRSVLVCDSARNMLLVIELFADKELEPEDKYQILLAMLFPDPAEALGMAGGDINDLIACVLWDACGLDVTGTKPHERAVFDWESDAPRIQASLMSAYGITWDQAADGLSFADVCALLGELVEDDGQTPFAQAIYYRTAKPPKRTKYNGEQCDAWSARRSHFAIKAADASPADAMEEQNNRSRDLFAALKAVAKGAEVGNV*	hhsuite_tools	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0018	shell	direct	high	674	0.999	GCA_003339975.1_00673
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	36408	36866	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	13748	14206	GCA_003339975_1_6_41	GCA_003339975_1_6_41	-	89217	.	.	hypothetical protein	MAKIIAFGKLFEPLDIELGDETVHARIDLRDSSVNKNWELLRSSREKMEAIQEAGKALESACGPEADKIAKDMADLMRPAICGAIGEQSYLEILVACGDGEPVQPEEANMVMALVFSEIEVAIIDRIKAFKDHKAAHYLKEIANAQPEPHKA*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0019	shell	direct	high	458	0.998	GCA_003339975.1_00674
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	36966	37670	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	14306	15010	GCA_003339975_1_6_42	GCA_003339975_1_6_42	-	89217	.	PFAM:PF08813.10	tail-tube-protein	MDIGFAPNHTHLYELDITPFAVKRTFARIGAGIATIDGDPSEEIDQTAYFDGDGNASSDVTGGQEIISVSGHRRHGDPYQDYVASLKFVRGEARKSTLRITDPAGEVVESSVTICNIKALGANGDANGKNEFSCELHFNGAPRVIPSDATVLPESVTATVGAVAVGKTVAASATVTPSSASDRCVFAIENDEFATVDSEGNVTGVKAGKTRLSVKCAAKPSVCAVVDVTVGASA*	hallmark_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0020	shell	direct	high	704	0.999	GCA_003339975.1_00675
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	37670	38065	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	15010	15405	GCA_003339975_1_6_43	GCA_003339975_1_6_43	-	89217	.	CDD:pfam12691	Minor-capsid-protein	MRFDLLDVVRERLKEAGIADVVTTLPDSSKHPEAVVVSLGVASRQTRYHDGEVATPLRLTVIAKRRSELDAMGDAMEAERILRTRPLDSRNGSYRVASVETAFPRPIPWDESGFFVWAFDATINITRKDFG*	hallmark_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0021	shell	direct	high	395	0.997	GCA_003339975.1_00676
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	38062	38394	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	15402	15734	GCA_003339975_1_6_44	GCA_003339975_1_6_44	-	89217	.	PFAM:PF11114.7	Minor-capsid-protein	MTVRIDLSAMESRFGDAEAEKRQELFAMKAASLIRKYVPVEETTLRSSEPMNSDYRGGVLVWDTPYAARHFYVPMNHSEAGTGDHWDERLKGGDMGALEDFAGGLFGGGA*	hallmark_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0022	shell	direct	high	332	0.997	GCA_003339975.1_00677
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	38395	38724	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	15735	16064	GCA_003339975_1_6_45	GCA_003339975_1_6_45	-	89217	.	PFAM:PF10665.8	Minor-capsid-protein	MLQIPKRALPSTAAVRVPLEGDYGGEFAEPVAIGHVRYEKAAGIRRTDYQLQDGTTGIVFIDAVNSEGAFEVPASSMVSIDGAPEVCVNACHPREQFAGRVHHWELEVR*	hallmark_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0023	shell	direct	high	329	0.997	GCA_003339975.1_00678
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	38729	39088	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	16069	16428	GCA_003339975_1_6_46	GCA_003339975_1_6_46	-	89217	.	CDD:cd08053	Head-Tail-Connector-Protein	MTPSVSYDEYTARGGKLAKEAFDASLASAVASVREVMGLNEPDGEQQAAAYVGAVCAAVDVDAAYGASGGIGENVASVAVGAFSATLAGTAGVSAYDLDMRRAILRELQGSGLLYQGIG*	hallmark_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0024	shell	direct	high	359	0.997	GCA_003339975.1_00679
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	39078	39224	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	16418	16564	GCA_003339975_1_6_47	GCA_003339975_1_6_47	-	89217	.	.	hypothetical protein	MKTVGFEVKKKRTPPKKDAGQKGDAQNAGADGAAGGKDAGQKGEDDDA*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0025	shell	direct	high	146	0.993	GCA_003339975.1_00680
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	39237	40130	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	16577	17470	GCA_003339975_1_6_48	GCA_003339975_1_6_48	-	89217	.	PDB:5UU5_D	Major-Capsid-Protein	MANNLGNAVTKFTTRLDKVLETEPKTSFLNMNGDLVGELKGNGEVKIAKIAMDGLGDYDRAVGFPVGSVTLDWETVSLNYERAREFEIDVMEDEEHELLVSANLMAEFARAMVAPEVDAIRFAKLTEKAGTKKAETFTDEKAALDAVLLAEEALQDAGAQLSSCKLCLTSHMKTLLRKAQPWRIGQSEAPNGNFDTFDEMQLIVVPGNRFLTAIDLLDGKTTGEEAGGYKQAAAGVPINFMAIHPSAAAVLNKHEKLRYFSPDVNQDKEAHKWQYRLFHDVFVYENKAGLIYSSYKA*	hallmark_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0026	shell	direct	high	893	0.999	GCA_003339975.1_00681
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	40157	40699	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	17497	18039	GCA_003339975_1_6_49	GCA_003339975_1_6_49	-	89217	.	PFAM:PF06810.10	head-scaffolding-protein	MDPENEDKAGEEAAAEPQKGATEATEATDPKPAAEGAEGAAEDGEELTDEHGHPAISKGKYERDIATKDAKIAELEKQIGEAAKTEAGRAALEKKIAELKDDQAEIRTDYELKLAGCTDEKKFKAAKKLVGDYEGDVDKLKADYPYLFAEDKKKGSTGKKPEGAGGSDIDDKLDRAFGLK*	phrogs_hmm	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0027	shell	direct	high	542	0.998	GCA_003339975.1_00682
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	40883	41083	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	18223	18423	GCA_003339975_1_6_50	GCA_003339975_1_6_50	-	89217	.	.	hypothetical protein	MLDDGQNGMLASLGLPQSFDGLDDDALVRIEETLSTELQRHGINAKGDGLNEHGKACLRLIEAIPD*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0028	shell	direct	high	200	0.995	GCA_003339975.1_00683
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	41073	42494	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	18413	19834	GCA_003339975_1_6_51	GCA_003339975_1_6_51	-	89217	.	CDD:pfam06152	minor-capsid-protein	MLDPDYIDKAGDMVAAAYTQIEAEMLDYLVAQMLLDEKLTSRGYTSLAMLAQTHDGALREILRRNSGGIAAAVMASVEDALKRSDEDDVRRLGGGRTAYPHQVAATVDGIARILERDNLDMIDGAKRAFLEASTRAITSVNISATTPDKAIHEAVRQLEREGISIISYRNAATGRQTVKNKVDVAVRRHVRTQIAQDGARMTLERMNELDVALVEVSSHPGARPEHAEWQGRCYSLKGDVTIGGVRYRDFYSATGYGTVEGLLGANCRHSFAPYIHGTRHAYAHDPKHASGVRGDEVYRLTQKQRYIERRIREAKRELRGAQAEYDADRSAEKLAEVMKAKQAIKSRQEAMRKLLEEANAKAKPGTSVLHRNQHREWAGDMPKTTGPARTKHGTERMRERGITEKAAASAITSPLKRFEAVADDNGRRAQKLVGKDATVIVNPDTGEIVTAYKTKARIARKYEREAKEAENAG*	hallmark_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0029	shell	direct	high	1421	0.999	GCA_003339975.1_00684
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	42494	43897	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	19834	21237	GCA_003339975_1_6_52	GCA_003339975_1_6_52	-	89217	.	PFAM:PF05133.13	Portal-protein	MALDEFSIPSCVKDAIREAGYTANTSMEGFVSTWWQWYTGTTQWYDEGYTTVEGRKKTRRRMSIRPARRVCREWASLILNEGTTITCEGAKAAKWLDGFLDASNFWVNGQSLVEKSMALGTGAWALWFDVRGDTETAMKIRRYDARMVVPLSWDEEGITECAFCTSVSLKGKRAYQLQLYVLDEGTYHIKTKLFMDGREVDAERHGVLPDFDTLIDLPPFGIIKPAIENTCVDLSPYGMSVFADGVDAIKAVDLTFDALCNEIDLTEAMVFMSDEMIDVRDDKGRMVPVAPRGPKGRFFRKIAGQTGKDFFEVFSPDIRVTPLKEAFGVALAELGDICGFGQNYFVLDKGGGLKTATEVSSDNSALMRNIRKHENVVRAAIDDVMRAALLCAQLHCGAKLGKVGLVSIGFDDSIITDTQAEKSMALAEIAALGVPRLKVEYLMKYYGMSEEDAVAAVPAEQIVDIGF*	hallmark_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0030	shell	direct	high	1403	0.999	GCA_003339975.1_00685
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	43928	45616	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	21268	22956	GCA_003339975_1_6_53	GCA_003339975_1_6_53	-	89217	.	PDB:5OEA_B	Large-Terminase	MLGMAQKLTQNQELYCQARARGLSQRRAYRSAYPKCNSTDAAVDAKACNLEKQAKVSARLHELNEAGARDAKLTRGRLLRRLDSLADTAWARVAEDAETGRRIDPAASHALVAASRELLPYAEDDATVRPLFVADFGLLISPDFCKPHRMIARREITDVWLGGGRGSMKSSYASLEVVNYIEQNPEQHALVLMKYKTAIRDAAYAQVVWAIKMLGLEDEYEMPDSTLRIKKRSTGQLIIFRGCDNAQKIKSIKVPFGHIGVAWYEEADMFKGMAEIRKVNQSLTRGGNDCIRLYTYNPPRSVHSWINVEMQRRRDAGEPVFTSNYLNAPREWLGDQFHADAEELKRIDLKAYLHEYMGEAVGMGLEVFDPEKVVFREITDEEIAAFDNLKAGQDFGWYPDPWAFTLSEWRQNTRTLLTFREDGANKLHPGEQAKRIRALLTWRDTPDGDPVYHHIPVRSDDAAPEAIAAQRDAGINAREAGKGNMRDASYRFVQSSTWVIDPVRCPKLAAEVRAMQYAVNKDGEVLNEIPDGNDHWVDAVRYSLMPIVRRARGAYRATPAEE*	hallmark_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0031	shell	direct	high	1680	0.995	GCA_003339975.1_00686
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	45746	46027	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	23086	23367	GCA_003339975_1_6_54	GCA_003339975_1_6_54	-	89217	.	.	hypothetical protein	MSDSLEDTVRRVSQASKCSSVDIAAFAGELARIGETAKEAFERMAESLAEIRRIADEQTKPEVFVVDGTPVQHAPRVPPKHVCGEHTDPEVLA*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0032	shell	direct	high	281	0.996	GCA_003339975.1_00687
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	46000	46212	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	23340	23552	GCA_003339975_1_6_55	GCA_003339975_1_6_55	-	89217	.	.	hypothetical protein	MGAGKDQAMSTHYKNRQPSGCAGFMEDAALVPLLLLVLAAFVFLIVPFCVIGSLALWVKEGICRIASKIR*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0033	shell	direct	moderate	189	0.887	GCA_003339975.1_00688
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	46185	46346	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	23525	23686	GCA_003339975_1_6_56	GCA_003339975_1_6_56	-	89217	.	.	hypothetical protein	MVGDLVGFREKYGEYACYVGGLPDDEESEQYIAENEERFDAIYRRWERERIRP*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0034	shell	direct	high	161	0.994	GCA_003339975.1_00689
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	46387	46593	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	23727	23933	GCA_003339975_1_6_57	GCA_003339975_1_6_57	-	89217	.	.	hypothetical protein	MTNWKKYFGSPERAAEMIADSEVRQKINDSVFARFPGIDAEWKHLGSDYRKSYALEWLESEADGVQLG*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0035	shell	direct	high	206	0.995	GCA_003339975.1_00690
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	46590	46835	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	23930	24175	GCA_003339975_1_6_58	GCA_003339975_1_6_58	-	89217	.	.	hypothetical protein	MIGTEPIPGVPMVRVLDEDGNEVLRGWYMRHENRQPCVINDWLKPDDVDHIVLHDSMADWNMPRRIIPTKITPPHRIEVIE*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0036	shell	direct	high	245	0.996	GCA_003339975.1_00691
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	46832	47026	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	24172	24366	GCA_003339975_1_6_59	GCA_003339975_1_6_59	-	89217	.	.	hypothetical protein	MKANVYSMLEECQEGCSLVVPSAEAVVAGKRSGDTKLNVIIDCEHRPVCEMWKKRESEEEGAGE*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0037	shell	direct	high	194	0.995	GCA_003339975.1_00692
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	47016	48125	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	24356	25465	GCA_003339975_1_6_60	GCA_003339975_1_6_60	-	89217	.	COG1690	RNA-splicing ligase RtcB, repairs tRNA damage [Translation, ribosomal structure and biogenesis]. 	MNDLKIYAQNLESAAMEQIETLANAPAFEGAKIRIMPDAHAGAGCVIGFTANLGDKVVPNLVGVDIGCGMLTSRIEFIEECHLDEFDEVVKKSVPSGFAVHNVQTCDIDAMGLLCRNELQNVARLERSMGTLGGGNHFVEIDAAGNGDAYLVVHSGSRNLGLQVANIYQRMAVETCKEPTPKGLEYLTGELRDAYLHDMHLCERWAGLNREAMMHAIYREARLGVLMGGTFHTVHNYIGNDGIVRKGAISAQEGERVLIPLNMRDGSVLGIGRGNEDWNNSAPHGAGRAMSRAKAKRELSVDGFREQMANVYSSTVCEGTLDEAPDAYKPAEQIVDALYPTVKVEKRLYPVYNFKAVEQKRERRARHEG*	mmseqs_cdd	nonviral_gene	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0038	shell	direct	high	1109	0.999	GCA_003339975.1_00693
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	48122	48325	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	25462	25665	GCA_003339975_1_6_61	GCA_003339975_1_6_61	-	89217	.	.	hypothetical protein	MSATWHDIAKEEPPAGILVLCQGAHGELFLGVHVGLGYFAVPNSRGGRIAVAWHELPEPYLPKEKTL*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0039	shell	direct	high	203	0.995	GCA_003339975.1_00694
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	48322	48528	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	25662	25868	GCA_003339975_1_6_62	GCA_003339975_1_6_62	-	89217	.	.	hypothetical protein	MRRDQALKIIEEAEEVMKAQRVGDPLYAMELMDVINACETALREVPEDTLDSIKRATIRKNEERGYYE*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0040	shell	direct	high	206	0.995	GCA_003339975.1_00695
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	48588	48932	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	25928	26272	GCA_003339975_1_6_63	GCA_003339975_1_6_63	-	89217	.	PFAM:PF09152.9	nucleoside-2-deoxyribosyltransferase	MTRPVLYVSGPVTGMPDDNREAFEAAADELAACGYIVRIPHWDVRPGEKWPAAMRITLMAIIAQADGLAMLDGWERSEGAQLEAHVARSLMMPVKTVSQWAARMPAKRGRKTCK*	phrogs_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0041	shell	direct	high	344	0.997	GCA_003339975.1_00696
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	48929	49390	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	26269	26730	GCA_003339975_1_6_64	GCA_003339975_1_6_64	-	89217	.	PFAM:PF05869.10	Adenine-specific-DNA-methyltransferase	MTKEKEAFCGKGGVAFSSERHYWETPQDLFDTLDNEFHFTLDPASTDENAKCEKHYTIEDDGLCQSWAGERVFCNPPYGRELSKWVKKAHAEVALNPGTVVVMLIPARTDTTYFHDYIYHKAEVRFIRGRLRFCIQGKAKDAAPFPSMVVVFR*	common_virus_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0042	shell	direct	high	461	0.998	GCA_003339975.1_00697
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	49387	49608	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	26727	26948	GCA_003339975_1_6_65	GCA_003339975_1_6_65	-	89217	.	.	hypothetical protein	MGVLDRFGGPQAWDINCATQDAALAALKHANPGCGTCEYGIVCPDCGLAYCKETDEWGDNFAPPCEYEGWQEK*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0043	shell	direct	moderate	216	0.973	GCA_003339975.1_00698
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	49596	49991	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	26936	27331	GCA_003339975_1_6_66	GCA_003339975_1_6_66	-	89217	.	PFAM:PF13395.5	HNH-endonuclease	MDAPTIRLERCPICGRTQPLNSHHIVKRSAGELFDAHGRKRKKPEITLCGFGNNLRDADGRYYCHGLAHHEMLHFRWVPTYEAIGSTYPKLDGGHLEYLLTDEPTKYDAALKMDGWQRVKTDWQNAELWVC*	phrogs_hmm	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0044	shell	direct	high	395	0.997	GCA_003339975.1_00699
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	49991	50788	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	27331	28128	GCA_003339975_1_6_67	GCA_003339975_1_6_67	-	89217	.	PDB:1G60_B	Adenine-specific-DNA-methyltransferase	METSSDNTIRNVDALAGLRELESDSCDALLTDPPYSSGGMFRGDRAGKTSKKYQSTGVIDVKPEFYGDNRDQLSFMHWCAMWLSECHRVLKQGSVAMVFTDWRQIAATVNALQMGGFIYRGVFSWIKPAARPQKGRFTSNAEYCVWGSKGPMPSDGCCIKGYFEKSPEPTAKRIHSTQKPVELLEHLLKITPEGCTVLDPFMGSGSTAIAAIRTGRSFIGFEMSEEYCHLANGRVSAELSQETLFNEGGGADRWLRRLCRRFGGR*	common_virus_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0045	shell	direct	high	797	0.999	GCA_003339975.1_00700
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	50769	51482	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	28109	28822	GCA_003339975_1_6_68	GCA_003339975_1_6_68	-	89217	.	PDB:1G60_B	Adenine-specific-DNA-methyltransferase	MPEFEVIAGDMFDVIGRVEPASCRCVLIDPPYMIGTQSVHRDNMIDPWADLMNGARFYREVIDAVRPKLTKDGAMWLFMNWRGLPGIYKASCDAKWLPASCMVWSKDWPGTGDPLRASHELCLLYTCDGFKRPNAKTLDVQTFKLVPTAHRVHSAQKPVPLLRMMLDFTTARGDKVLDCFCGSGSTGVAAVSMGRRFVGIEANAAIAEVARRRIEGEASQGQLFVTSEEGKRGNIER*	common_virus_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0046	shell	direct	high	713	0.999	GCA_003339975.1_00701
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	51475	52110	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	28815	29450	GCA_003339975_1_6_69	GCA_003339975_1_6_69	-	89217	.	PDB:4M4W_K	Replicative-helicase	MPALTDEQRAEIDREAKEAARREHVRVARQRIASAHIPPLYASASLEDCHPAVAEYASEVAEGGTGWLLLTGRNGRGKTHQACAALLHLAKTHRVEFATMQGILDECKQTFGRPESEEDVKAHYRNVPVLVLDDLGKENPTDYSLPIIFDIVDRRYTRLKPTIITTNMNAAQLLAHMSTKGDRTMAESVVSRLVTARVVEITGPDRRLRNA*	rep_hall_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0047	shell	direct	high	635	0.998	GCA_003339975.1_00702
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	52139	52834	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	29479	30174	GCA_003339975_1_6_70	GCA_003339975_1_6_70	-	89217	.	pfam09524	Conserved phage C-terminus (Phg_2220_C). This entry represents the conserved C-terminal domain of a family of proteins found exclusively in bacteriophage and in bacterial prophage regions. The functions of this domain and the proteins containing it are unknown.	MGFYFQDDFWEACSELPKKDRDAAAAAIVAYYFDPDEKPSIKGASKAVFIAFRERIDLSRKRSNAGKSKPDQNDDQTKDQSRIKPKATGDQSGNQNRDGSNVKPDGHLLKGESEREKDLKEPPLPPLDECDNEAAAFAVEALAAFNAITGQDVRDMPGDAWCGLRRVFDAGRTIDDVKAVIEKKNAEWKDDKRMARFVRPSTLFGDKFDEYLNQKDEGGSSAETSEYAATF*	mmseqs_cdd	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0048	shell	direct	high	695	0.999	GCA_003339975.1_00703
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	52845	53351	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	30185	30691	GCA_003339975_1_6_71	GCA_003339975_1_6_71	-	89217	.	PDB:3EIV_D	Single-stranded-DNA-binding-protein	MKDFVMDGYVCKGVEVRSTQAGKLVTKFTLNSPDYNRSTQQSEPAFFRCEYWHNGQNDPKAANIVEGAVLLVWGSMRFDQYTDKAGNKRSETAFKVREIGLIKPPARPQQPQYAPQPTQQAYAPQYAPQPAPAPVQQPAAAYQQPAPVAVPPQAVQVPMSVYDEDIPF*	common_virus_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0049	shell	direct	high	506	0.998	GCA_003339975.1_00704
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	53348	53695	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	30688	31035	GCA_003339975_1_6_72	GCA_003339975_1_6_72	-	89217	.	.	hypothetical protein	MQELYAQLDELTDALMRELDTCKTSGCQYAENEAEYRKALRIEILAERDKRTPVTIISDVCRGKPEIAALKQRRDCSEAIYKASQEAINVYKLRMRMLDAQISRIWSSGGQGGAA*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0050	shell	direct	high	347	0.997	GCA_003339975.1_00705
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	53695	54228	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	31035	31568	GCA_003339975_1_6_73	GCA_003339975_1_6_73	-	89217	.	PFAM:PF04404.11	Erf-like-ssDNA-annealing-protein	MTGSVIQSKLLEIQNALKVEKGHYSDYGEYYYRNKEDILEAAKPLCHEKGCIITCDDDVRLLENGWVYVVTTARLTDVESGESEERHGWAREVAEKTKMDPSQITGAASSYAGKRALGNLFALDDSTDADGQGAKQEPPASGPFLARCRSCGTRMQFFNPEQMRTYRCCPNPDYEVE*	phrogs_hmm	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0051	shell	direct	high	533	0.998	GCA_003339975.1_00706
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	54218	55273	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	31558	32613	GCA_003339975_1_6_74	GCA_003339975_1_6_74	-	89217	.	pfam07083	Protein of unknown function (DUF1351). This family consists of several bacterial and phage proteins of around 230 residues in length. The function of this family is unknown.	MPRAKAADTVEVVEVEAEIIDGAEDQQKAELSVTNKPGSIEANFDALEEYVDGILEDYADWEPSADNAEDVKQCDREKKYLNGLASQLDTRRKAVKSEYLKPLDAFEARANSIRDKIKATAKRLDDVKKQADQAEKDAKYSALEAHYCEFAELLAPVVPYARLHDPKWLNKRPTLPQAIKELDAKVEKVANDWDSLKKRNLEFHDAAEAFFFEHLDLGAACTYNDKLVEDHRRIEELKREMAQEEEAQEAAPAQERPEPAPAPMPAPVPVSAPQPAPAPVVACAPQPMPAPMPEPVPPDAGPYVMVINLATLDQIQQIGRFSGSIGVTGVFKRGTLQEAYMREAGGVGYDR*	mmseqs_cdd	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0052	shell	direct	high	1055	0.999	GCA_003339975.1_00707
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	55266	55586	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	32606	32926	GCA_003339975_1_6_75	GCA_003339975_1_6_75	-	89217	.	.	hypothetical protein	MFDKQKSDEKQILCGCGSITEAQADALMKKVSSMEGIPDYFVNGVAVGLYFACLESGDMRGTTIEDFVRNAHDAYIAEAATQMVDKLVARKVCGMGGVMKVEVRHA*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0053	shell	direct	high	320	0.997	GCA_003339975.1_00708
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	55634	56149	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	32974	33489	GCA_003339975_1_6_76	GCA_003339975_1_6_76	-	89217	.	PFAM:PF13921.5	transcriptional-regulator,-D5-like	MPRGRAWTVGELAYIRRWAGRKPAHEIARHLKRTKQAVERQAQRMGVSLKHYESTLVWCPNCCAWRTRLTLGFCPVCSRKQTRAEQMEREKALLDRLAPEERALKRPELHESRIDPKPRLEAVTDGMRPWAAARIEEQNAVLVQRWETLNLDRENAARRRRIERMEDQLKN*	phrogs_hmm	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0054	shell	direct	high	515	0.998	GCA_003339975.1_00709
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	56142	56567	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	33482	33907	GCA_003339975_1_6_77	GCA_003339975_1_6_77	-	89217	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MNRQTLINFVPVKRRVKLEFRGKCTSCPWKLKGCHVYTPQATIDEERALGQAYKGPRHEGPVSVRIDVFRVLPGSRPKRVLGEPDTMTPDIDNIAKAVLDGLNGIAYDDDKQVVELHVYKHDRERRVGDSVRISVEGVTGA*	common_virus_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0055	shell	direct	high	425	0.998	GCA_003339975.1_00710
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	56564	56968	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	33904	34308	GCA_003339975_1_6_78	GCA_003339975_1_6_78	-	89217	.	.	hypothetical protein	MSAAKSPELRAREACRWIAGNLDAFDWLVGVILAEVDKGNPCFMRGDAFKLAREKKVRLSNVERLCRDNNLWAIFTRYAAMKYPRAAHTVHFKGAPIDEAPLARIWREEVDADTVFRASSWREALEMCNRGEAA*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0056	shell	direct	high	404	0.998	GCA_003339975.1_00711
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	56965	57207	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	34305	34547	GCA_003339975_1_6_79	GCA_003339975_1_6_79	-	89217	.	.	hypothetical protein	MARSQRAETRGKREARPRYQRQPRPIRNRTNRSIPHRSHELLGASLALALCITIIWGFGWAYQIGYEKGYGYAVMTAVEL*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0057	shell	direct	high	242	0.996	GCA_003339975.1_00712
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	57302	57550	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	34642	34890	GCA_003339975_1_6_80	GCA_003339975_1_6_80	-	89217	.	.	hypothetical protein	MFKRAEVEAWFTGCNIKAGKTTMQFELDQEYKSTLPDLALLTGTKVRLEIIDDQQVLFVSKETGEFFDEEEIDEAEEPDDAA*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0058	shell	direct	high	248	0.996	GCA_003339975.1_00713
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	57563	57787	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	34903	35127	GCA_003339975_1_6_81	GCA_003339975_1_6_81	-	89217	.	PFAM:PF13744.5	transcriptional-repressor	MLYPNLEAEMKRFGVDQRDIAQTTGKHVTTISDWMNGKVDSAFPVKQAIKVQRELFPTLPIEYLFDEQPIQRAS*	phrogs_hmm	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0059	shell	direct	high	224	0.996	GCA_003339975.1_00714
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	57989	58363	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	35329	35703	GCA_003339975_1_6_82	GCA_003339975_1_6_82	+	89217	.	PFAM:PF10078.8	transcriptional-regulator	MDNRIAALLKERNIKPASFAEMAMIPASTVYAIVNGTTKFDKIGIGTFIKIAKALGMTVEELYFGTYEIDPALSEITATYRQTTPEGKRFMSANAKTVREVYPTDEAKNGGENNVQDDHVSGVA*	phrogs_hmm	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0060	shell	direct	high	374	0.997	GCA_003339975.1_00715
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	58376	58768	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	35716	36108	GCA_003339975_1_6_83	GCA_003339975_1_6_83	+	89217	.	.	hypothetical protein	MSKGKKIGIAVAAVFVVVIAVSAITYQIAPPASSATDAQQTVADEYTKTDASQSYVRDGEECMGYRVAVSATATEEQLLSVFEEVVAGDGYPMHTVWFYSSVDKAQGGDQYDVAMVEEESAGGDPVVTMA*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0061	shell	direct	high	392	0.997	GCA_003339975.1_00716
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	58770	60242	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	36110	37582	GCA_003339975_1_6_84	GCA_003339975_1_6_84	+	89217	.	PDB:4BQQ_A	Integrase	MAKRAKRSAPKKGARAAIYARYSSHNQRGESIEIQLDNDYAYCHEHELEVVKVYIDEAKTGRDTNRADFQQMLEDAKRHLMDYVVIYKVPRIMRNRDEMALARIMLRKCGVEILYAGEQIAEGSSGVLQLGMLEVLAEWESAVDSERITEGIAKNAERCMANGQRLYGWDIVDGFYALNEQQATVMRMMKDMLLSGSMIADIRRACEPYRTQFGNKFTQSAITKMLKRKQNAGIYVYAGYEIPGGMPALWSLEEQQMIWKILEKNARPRKRENTENYALTGKLFCGKCKTPMIGTSGTSKAGTRYYYYRCKKCRRNVRKDIIEANVADAVIAALSDEATREKIADLVAEIEQDTGAKPQSEIIRSELHDIELSFDRIWQAIEGGYAPPGGKERVEELTKRKELLEDELRVAVSIESVTVDRNRILFWLEDIAQEEDPETLIEVFVSKVVLVGDDDLHIAFTFEGGDDDIGQIVDDSGGVRVNGPELHHGN*	common_virus_hmm	common_virus	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0062	shell	direct	high	1472	0.999	GCA_003339975.1_00717
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	60310	60921	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	37650	38261	GCA_003339975_1_6_85	GCA_003339975_1_6_85	-	89217	.	.	hypothetical protein	MLSAVLRSDVAIETSIRIIDAFVETRRFLASNAALFERIGQVELKQLEYQKTTDKKLDRIFAYLEDTPETTQKIFFDGQLFDAFSLMVELVQKAQCEIELVDGYVDVSTQNILAKKAVGASVSVHTLPDARLTRADINTFNSQYPTLKVQRTSAFHDRFLIIDRSIGYHIGASLKDAGKKCFAITKIQDAQMMEGLLERLKKI*	.	hypothetical_protein	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0063	shell	direct	high	611	0.998	GCA_003339975.1_00718
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	61712	62674	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	39052	40014	GCA_003339975_1_6_86	GCA_003339975_1_6_86	+	89217	.	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain  [Transcription]. 	MSFRDNMQHLRATRNMTQEQLAMLLGVSRQSVSKWEAERAYPEMDKLLKMCGLFECTLDELVTGDLTGRPANGAASIPPGKSQQDVTGYDQAMRVFAWKLPLGIAVIFASSALALILSDPGLMPIAEVRSFASALVFVGVAVGLALILPASFARGAFRKAHPFVDDFYTAEQKNQARTALSTGLVAGVGLLMAGLAATIVLQADVWLASATFLAFAAIGVFVIVRSVLLGTRCNLERYNRASLGGMSEEQIEAMGDDGLAERARRAKRERGTYAAVMLAATAVGLVLMFTPASRLFLLAWPVGGLACLAIKAFRSARSDG*	mmseqs_cdd	nonviral_gene	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0064	persistent	direct	high	962	0.999	GCA_003339975.1_00719
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	CDS	62883	63626	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	40223	40966	GCA_003339975_1_6_87	GCA_003339975_1_6_87	+	89217	.	COG1136	ABC-type lipoprotein export system, ATPase component [Cell wall/membrane/envelope biogenesis]. 	MSTTIIAREVKKSFSIGRGSKRRVADVLRGVSLRVESGEMVGIVGPSGSGKSTLLYCLSGLEAADLGSIQMMGTQMVHAGRNALSRTRRDHVGFIFQSYNLIPSLSVGENVSLPARLAGRPIAKAQTSAVLKSVGLDGKGKSRPGDLSGGEQQRVAIARALAGGADVIFADEPTGALDSRNGRAVLSMLRRIADDPKRSVVMVTHDLEAASMADRILVLRDGQVAREMGRSTPAQILAALEDGEVPA*	mmseqs_cdd	nonviral_gene	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_CDS_0065	persistent	direct	high	743	0.999	GCA_003339975.1_00720
GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote	cenote	tRNA	23548	23623	GCA_003339975.1	PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975.1_PPUA01000014.1	GCA_003339975.1|PPUA01000014.1	GCA_003339975_1_6	GCA_003339975_1_6@C1	888	963	tRNA-Ala	tRNA-Ala	+	89217	.	tRNAscan-SE score: 76.4	Ala	NA	tRNAscan-SE	.	C1	40966	22661	63627	GCA_003339975.1|PPUA01000014.1@region_22662_63627@tool_cenote_tRNA_0001	.	.	.	.	.	.