core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	323629	324396	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	1	768	GCA_003349825_1_2_310	GCA_003349825_1_2_310	+	463944	.	COG1179	tRNA A37 threonylcarbamoyladenosine dehydratase [Translation, ribosomal structure and biogenesis]. 	MDANDAQSWQADEERRFGGLRRLYGSAGYERLRASRVAVVGVGGVGSWAAEALARSGVAELVLIDLDHIAVSNVNRQIHALEHTLGQAKVQALRERVAAIHPGCTVHAVEEFVEPANWPALLPGPVDAVIDCCDQVRAKLAIAAWALREHVLAVTVGAAGGKLRAQEVEVADLSQTTHDPLLAALRQRLRKEHGAPRSGPIGLACVFSRETITRPPESCELDGSLNCHGYGSVVSVTATFGMVAAGEVLRCLAGA*	mmseqs_cdd	nonviral_gene	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0001	persistent	direct	high	767	0.999	GCA_003349825.1_00959
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	324445	325965	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	817	2337	GCA_003349825_1_2_311	GCA_003349825_1_2_311	-	463944	.	PDB:1Z19_B	Integrase	MLFKRNGSPNWYYEFVYKGKRYRGATGTASKTEARAIVNRIRQQVAEDVAAKRQGIKRWTMGQLADAWLAASKNTHRDWKNNESRVRKLFGRALVDGKVVQATYKDDRGQVRPRFGLSRDLPVHELSHATLLELRNARALEGNSPATINREMALVQSLVAFAAANGVVTPAKPLVFSSKRQTAGALKFKESKGKLRWLTLEEETALLAELERKYEESKGGGKIGNVLIQDQIDLCIFLLDTGARYNEVARLTRDVLDMERGVVNLYRSKFGKASDLKMTARLRRMLEARLQRLGTRRYLFPAGQGRNWADEDIPRGHATRGIQASIDAAGLNDPLKVQAMGRVTPHTFRDTFASRLIQNGFTLYEVQALLGHSSPAMTQKYAKLLVLDVSSRAAEKLNELHGQRAIRSDAETIPFRETPPVNDDPSAVTRVSLGSWSIPVALPSWGLGPPKSPPNEGPLINGITLGVTKEEAQEASIYAASRASGMVGCGGLEPSTNGLKVRCSTS*	common_virus_hmm	common_virus	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0002	.	unmatched_CDS	none	0	0	.
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	325989	326231	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	2361	2603	GCA_003349825_1_2_312	GCA_003349825_1_2_312	-	463944	.	.	hypothetical protein	MNLDSLRLAASLAGYQVTETAPEGDVTAGHCEPWLIAVKGDHELLLEGNWTTNMITVKDLDGRPLLTGAPGAALPLAALH*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0003	shell	direct	high	242	0.996	GCA_003349825.1_00961
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	326176	326583	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	2548	2955	GCA_003349825_1_2_313	GCA_003349825_1_2_313	-	463944	.	COG1396	Transcriptional regulator, contains XRE-family HTH domain [Transcription]. 	MANALYNATGSTARTMRKRAGAWLKSLREQAGLTQLEMATRLGYAYLTMISQIERGIGRVPPEDWPTWAELLRVDTREFARQMLYWYDPHAHYALFGGIHPHDAENLPRETSNVNRSFESGLAKTGRKPGRVSGD*	mmseqs_cdd	nonviral_gene	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0004	shell	direct	high	407	0.998	GCA_003349825.1_00962
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	327589	328254	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	3961	4626	GCA_003349825_1_2_314	GCA_003349825_1_2_314	-	463944	.	.	hypothetical protein	MNYRNPFRGLPQPQAMQAARSVLNDVVKAGTEAGYWEPMKDQPVDPERAWVHDPAGLRFELYVFPTGLGKAPAVGMTLAPGVAPGARVTPHEAAWDIQDREQEVPDVYENASHEPAVIAQRLHEALVQDAYARMLAKQVLVNLAVMIQERQYLTEQAKKLAELGFQRDMILIDHDGFFLMMDHPELGLEVKADLHGVRQVAFKKPALPPDMLGKLLEAIRG*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0005	shell	direct	high	665	0.998	GCA_003349825.1_00963
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	328251	328892	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	4623	5264	GCA_003349825_1_2_315	GCA_003349825_1_2_315	-	463944	.	.	hypothetical protein	MTYETAKTLREAALALVPDVIAAGERLGYWTRAEDQTQGTREFPFFFVRDAEGLTFELSAGIWEYAGKIGCRVATLRRDGLAVSPRDVVAYSTKLPIAYADHKRGAEAIAKDLYRRVTGTEQARDIAAKVLKALDARLENRVSLDRLTEALRGLGFEVHNMDRESFSQRTLYHRDLGRATLCAGGRLTMDHIALSTANLDRLATVLNLLKECQ*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0006	shell	direct	high	641	0.998	GCA_003349825.1_00964
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	328889	328990	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	5261	5362	GCA_003349825_1_2_316	GCA_003349825_1_2_316	-	463944	.	.	hypothetical protein	MNFDLLETLLCAGSDETVAVMAAAAVDMEDLDA*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0007	shell	direct	high	101	0.99	GCA_003349825.1_00965
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	329078	329413	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	5450	5785	GCA_003349825_1_2_317	GCA_003349825_1_2_317	-	463944	.	.	hypothetical protein	MQGIEQIRRAASVSHLVNPAVLKPAEFDAWGVRGVSRDGHVLYQPHHTENGSLGPVYRTAAQAAAAILTRRATGRWERNLAFGPVEEPPPYQDDGRTPNLGALEGAEYAEA*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0008	shell	direct	high	335	0.997	GCA_003349825.1_00966
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	329482	329736	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	5854	6108	GCA_003349825_1_2_318	GCA_003349825_1_2_318	-	463944	.	.	hypothetical protein	MYQGHHPDGSSIQKHSAGSHYPYVVRVVEHTATNLGAADVVDPSGRIVGTFFYPLGNKEKRLEAYGRAFAQAEELAERRRDSLN*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0009	shell	direct	high	254	0.996	GCA_003349825.1_00967
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	329810	330001	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	6182	6373	GCA_003349825_1_2_319	GCA_003349825_1_2_319	-	463944	.	.	hypothetical protein	MPDRLLHIAHFDGRKRRAFVYRCGSTGEYRVELWVGGLRRYEADYWTEDHGDALRTAAAMVSA*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0010	shell	direct	high	191	0.995	GCA_003349825.1_00968
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	330011	330202	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	6383	6574	GCA_003349825_1_2_320	GCA_003349825_1_2_320	-	463944	.	.	hypothetical protein	MSARLTAEFQAGTYRIRSYGNGWAYEVEHVASGRTVWVQDDDAEALAFHCAYFHRPDLLADYF*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0011	shell	direct	high	191	0.995	GCA_003349825.1_00969
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	330199	330372	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	6571	6744	GCA_003349825_1_2_321	GCA_003349825_1_2_321	-	463944	.	.	hypothetical protein	MTTPLRRKLAYRVRRVAQRPSEPYRPIAWTDGRRVFLPKEFAGAPRVIYVARVEVAR*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0012	shell	direct	high	173	0.994	GCA_003349825.1_00970
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	330386	330475	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	6758	6847	GCA_003349825_1_2_322	GCA_003349825_1_2_322	-	463944	.	.	hypothetical protein	MDRRTRNDHWALDSRARSQAELRLFAFGG*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0013	shell	direct	moderate	89	0.989	GCA_003349825.1_00971
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	330551	330931	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	6923	7303	GCA_003349825_1_2_323	GCA_003349825_1_2_323	-	463944	.	.	hypothetical protein	MSLRLDQIVADIRRNGGITLNVTTGKPRTTGWAVSPYKDREEKFQALTINRLASYLSRHGVLLAQPHHYLGAWFNEEDGFTYLDVSIVVSTPADALEVATKHDQLAVFHLDTCTTIPTPELRRKLA*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0014	shell	direct	high	380	0.997	GCA_003349825.1_00972
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	331993	333879	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	8365	10251	GCA_003349825_1_2_324	GCA_003349825_1_2_324	-	463944	.	PDB:8DGC_F	Large-Terminase	MRRLSIILVIVQRPWWWDTDDPYKADLRNLVALVWDHLNLPSPTPAQYEIAYFLQFGWAGYGTTPDGEIVHWYGQEPVEPDRTGWTRLYEYPEQGRADILEAFRGIGKSYLTSVLVLWKLLRDPYNEKVLVVSASGSKAQEFVAMTKSLLTTMPIFAHLVPRPDQRDKADRFDVNGASVSQSPSLKAAGITGQITGSRATLIIADDVEVLDNVRTEEARQRLLTKLNEFDAIKVTGWAEIIMLGTPQLTETIYSRLAKERGYLPWILPARFPRAEKRSNYIIQREGLPPWDALAPRARAADRDPSLEWKPTDPERFNEDELLVRESRGRSFFQLQYMLDPSLSDAERYPLKLSDLIVMSVNSTKAPLTVSWGHATDGKNKREDIPNSGFSGDYWLGPMFVDTEWREYEQSVLFVDPSGRGKDETAWAVVKTLNGILYVCEVGGYAGDPAEAMRRIAMCARRHNVNEILVEPNYAGAVWIAAFQPVLAALWPPKNPGDAAGCAVIEAEWSRNQKEARIIDTLEPVMTLHRLVVDESVARDEVLMYQLTHISRERGSLAHEDRVDALAGAVARFTSTLMLDVNDAAKAQRDAELEAEVEAFLEGFVPEAAVGYLSGRTVDGETWYQVDLR*	hallmark_hmm	common_virus	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0015	shell	direct	high	1886	0.999	GCA_003349825.1_00973
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	333897	334202	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	10269	10574	GCA_003349825_1_2_325	GCA_003349825_1_2_325	-	463944	.	.	hypothetical protein	MTEKTKIQVIRERFEETLVDILRGRPVIDKDGVLATREDGTPLIERPQAADLNVVRAYLKDSNGSQDGKELPKTGEPQGILKSFLEHKGRALPFAGSVTPQ*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0016	shell	direct	high	305	0.997	GCA_003349825.1_00974
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	334199	334621	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	10571	10993	GCA_003349825_1_2_326	GCA_003349825_1_2_326	-	463944	.	4PV6_O	hypothetical protein	MGYSIRRVDGAAHEDTLRSLHVLTFPCDEHEDYTEGWWWLAYLNGEPVAFAGMRWAVSEAEAVYLSRCGVLIGHRGNGLQRRFLAARLRYAKSLWARAAITTTYNNPASANNLIRAGFRLYTPDTPWSVLGTNYWRRDLT*	hhsuite_tools	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0017	shell	direct	high	422	0.998	GCA_003349825.1_00975
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	334625	334909	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	10997	11281	GCA_003349825_1_2_327	GCA_003349825_1_2_327	-	463944	.	pfam04550	Phage holin family 2. Holins are a diverse family of proteins that cause bacterial membrane lysis during late-protein synthesis. It is thought that the temporal precision of holin-mediated lysis may occur through the buildup of a holin oligomer which causes the lysis.	MNEDLGLGKTLGLIAGVGVLVALGKLLASDEKLTFRLVLGRTLLSAALAVAACSLLAFIPGINTLALVGLSTASAVLGEQFLEKLVATKVGNTQ*	mmseqs_cdd	common_virus	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0018	shell	direct	high	284	0.996	GCA_003349825.1_00976
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	334913	335137	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	11285	11509	GCA_003349825_1_2_328	GCA_003349825_1_2_328	-	463944	.	.	hypothetical protein	MSKKYLHIRENVVVAITLPGESFMQYGAIVEVPFDTKVGVGDVYPEGAKREAAITDVNAAKQEGTAEAPKRKKA*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0019	shell	direct	high	224	0.996	GCA_003349825.1_00977
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	335153	335422	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	11525	11794	GCA_003349825_1_2_329	GCA_003349825_1_2_329	-	463944	.	PFAM:PF07087.10	tail-assembly-chaperone	MVFPVTKRYYCTGFKSNTHNPCCKAHDNAYGINGPLTGRKKADEALRRCFISNGMHPALAWGAYFAVRWFGWTIWYWHRRRHLLNLIFN*	phrogs_hmm	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0020	shell	direct	high	269	0.996	GCA_003349825.1_00978
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	335407	335991	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	11779	12363	GCA_003349825_1_2_330	GCA_003349825_1_2_330	-	463944	.	PFAM:PF14301.5	tail-protein	MSLYAVVDSHGTVVKLVSGSEEQVLLNVGEGEEAIFDPYPGDAYWDHENSQWVPIPPQPSPVYEWDPYEKQWKDPRSLSAVKREAKARITAARDAAEDGSRFECDGAVYQSDLPRISGASLGALTALLNGQPFAVDWTLADNTVKTLDAPGMLRVGFAQFAHINALHQKARQLKAQIDAATTIAEVEAIQWSFP*	phrogs_hmm	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0021	shell	direct	high	584	0.998	GCA_003349825.1_00979
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	335988	338591	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	12360	14963	GCA_003349825_1_2_331	GCA_003349825_1_2_331	-	463944	.	PFAM:PF13550.5	tail-protein	MRSEFNLPGSGPNYPVLWPYLERSHVIVLIDGTPWPFEWVSDTEIRVDFGADGVPPPGAKKLEIIRVTPDLESYAVIKDAANLDADQLNRMRRQLLYLLQERSGGIAGSVGNAITAASSQIESISNALADVNNVLATLTDNLATLDELRSEVTVAKNAATTARDAILSEIADNSDRFTVVNQRLVDLESGADELGSRITSEVLARSTEDSALSARIDQAYADFQTADGALSAAILDVDQARADGDAALASRVSALEASSGGVDPADFAQVQALAEATADALGNVQAQHVLKTVARSDGKQAVAGIGVAATASGDVAQSEIILMADKLLVVPPGAPDDPPNPIMAMGTVNGQPTTVFAANRFGDQSIGASVLVDGSITTRKLTVTGSNLIANSDFATGDLTNWRPWSAPALQAVVPATDADVPPGAPARYVCRFKLTPGTTSTHIAIFAADKAYSDAGADKDGFSVKPGEQYHVSIYAARSEDYAASGFSVIAYFYKTDGSWTTAASVLTAAPSALSSSTWTELKGSFEVPAGALRCWLYVRSTDTTAGGVYFTNLRCARMTDGDLIVQGAVKADHIDSRGLTIKDNEGNVIFGAGNALDWSRITGQPSGIYNSNISIAADGTLNGGGGGKVTYAGLGGKAMGLIDAITPSNVSTYIANAAIGVAQIANVLQSTNYAAGSAGWKIDKSGSMEINNLTARGNITANAVTANSITVNGLQPGAATNVVAVVDTGTVTSPSTTSTTMQWFTVVSATITTVGGKVALGIDVDPTFSLSKVAGSVGSLFCRARVLRNGSPIYTARQRRFDYSDSTVGTQTVDYPHAPAILVDTPSAGTHTYAVQLGYRSNGSPHAAYATANDRRGLSCMEFRR*	common_virus_hmm	common_virus	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0022	shell	direct	high	2603	1.0	GCA_003349825.1_00980
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	338592	342752	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	14964	19124	GCA_003349825_1_2_332	GCA_003349825_1_2_332	-	463944	.	PFAM:PF13406.5	internal-virion-protein-with-endolysin-domain	MADLTPIPEPIVNPSPNTRVNANLANYHVPERVPAPAGLDPDVDAPDAVDVAKAWWQRETLIGTLSRHYGLDWDDEGDPPDLAWNPYSFYARNKEEFKDLEGYINRGDFDDVYSESAFRRKAELIRKSLEDLETIYRGGFLGTVLGMGASLLDVTTVMPAGMLTKGRAASRLGNALRIGAAAGADAAVTEGGLHLWDTTRTASESFMNIGTAASLGVGLGSLIKGLDPRSPLNPGHPDNPLHPENFAKDNEVIEYRLGQRPEEGDRVGGKDSVGAARSLDDGFAQGEGISGAIQRGAEKVLGNGTPLGRMRHYEGPGFKALAAIVDLGGRITKAMTRGEPLSPDAESIRLIYTQHARGVQEDLRLIYRSANLDVGASRAQFGSRSLLNTFTLGRVDNNRVPKEMFFNGVFRRMSATMLEGNGYSGASHRVALEFQDELKARGFSEQEAAKVWARVEEAAGRIHQMFDRFSSDAVKAGLLDEKSLAKGYGLPILYVRTAINENPRDMENLVMRLLADRPPDDWLEQNGMLPWAQLKEDPAAMNAALKEWRGEAEEAAMAAAVSALADAETRLKRVQDEFDLIANHGLPEAERQRKHRTVAAMKAAVRASEANYYGRALGYQLARIEKAEARLAEIARDYPDLEALADDVAAEFAKTGEQIDTTIAGFPTLIERRRSLKEAMQALSAERKVAKKAGDEVALEVIRAERMKLLEERKAATQELYALRKELDAVAREQRNAARWMEAVARKLDEVRSDKDLVPAGPGVQRVLDEHAERMRLLREKAHEAEQVRQWAVHQWRQVRAGLQVSRKELREARKDARKAARLVKQLRGSTPLVKYVEQLVSNLRGQERAPRSMLLDAVPENGRLRERKLEWTPELWAELAAKGFVETDPVTLVDRYARDMGGRLAIHKALGGRSREDILREVRDYYDDKAARAATEAEKTRISRIRDENLTDIQTTWDRVLGHSDIEDDNAVTWFAEKLRQLGYIRIAGGIIFSAMGDLATAMFAAPGFVRGFRTQSKAYKKLVERALEGDESARELSAILASMETGAHMATSVNALGGGSARAALGFGSGNVRKATEKVDRLMNMVSDRVNVLSGLAGFSNSVRRVAGLVQLSNIARWVADYDNLPQARKVELASVGIDRGSALRLHELFTKYGEKHGELFIPGTPKWLAEEDGDAMAEVLNAALVKAQNRASYTNGFGNTPRLMDKWTGKLLFQFQSYAFQYTNNFILAGIQRGAVTGEWLRFAHIVGISLAAGVLTATARAQLRGEDPFEWSNAQWAKEVVDRAGLLGWLSPYVDGMTKLVGPTVNEVTGMTLIEPSTRYRENGVLESFLGPWASNLKHLSSMLGDVARQEWEPLREKAMRLVPLNQQINGLRFIVESLQGD*	phrogs_hmm	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0023	shell	direct	high	4160	1.0	GCA_003349825.1_00981
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	342756	343136	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	19128	19508	GCA_003349825_1_2_333	GCA_003349825_1_2_333	-	463944	.	PDB:2MXZ_A	L-alanyl-D-glutamate-peptidase-endolysin	MTLDARSISRLKGVNPHLVAVVQRAAEISPVKFIVTEGLRTKERQAQLKAAGASTTMNSRHLTGHAVDLAAVVDGEVRWDWPLYHKLAAAMQKAANELEVPIVWGGSWKSFPDGPHFELDRRTYPA*	common_virus_hmm	common_virus	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0024	shell	direct	high	380	0.997	GCA_003349825.1_00982
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	343133	343915	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	19505	20287	GCA_003349825_1_2_334	GCA_003349825_1_2_334	-	463944	.	PDB:3HDF_A	Lysozyme	MDSLLPTTPQGVADRAIQAQVDALYAKGELAVNEWTRNAKPAAGWNLEAFLDFRSRATASVPQFPGAQVRTGWLDTAKPFVAEHEGNELRAYHGVLSSHRKAGKKYAEPGHNSIEEVSVGYGFNLQRKDARHVFKTELGLSDKEFDEVFNGQRMLTPAQAEKLLMFGLYEANAYLDRSLGPGVPLRDHERAALVSLIYNAGYSAVSRSGLLAAVKSGDRAEVARRILKFRTAGGALTERRRGEAALFLGAQAETFFASLK*	common_virus_hmm	common_virus	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0025	shell	direct	high	782	0.999	GCA_003349825.1_00983
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	343875	346487	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	20247	22859	GCA_003349825_1_2_335	GCA_003349825_1_2_335	-	463944	.	.	hypothetical protein	MSGQREARHVSGPGYRAPDAPAPLPSVSTAPYRARAAEYRADPRGLTAIGDALSRFFNTGAKTMDALAELDHKQELVRIERENKALEKKAIADQATGQSLDPRYADRQSYAGTYAAAAAEESARGAVEALREQLSKMPLDGTANPQQIAEDFFKREFGNGTGSQDYDAQWVNAFRRQAEPLVVQYNEAISKTLETNALETIRAAAIKDLLDPSKATPERVTELHDRVLTVARGNQEVADKLFEGVVVQAFMNDGNTTAILNSLKQSGFADRNPDAYLRLSEMAHQRTNSIKTWQAGVEVEKWHADFAAALNDPSRDRVGTVLEFAARAWDIDSRHGVGQSRFMSTLLSAWDKATKDQAEINVILKALLENRPGSLVAAEVGVEIGKVMSKHFDPAIQQWVAMNPSLFPTLAQDVAAGKQLDPLGSRQAALEYAALVSAPQFVSASPEAQSNTYQSLFGEAIITATDPERAANAVAALAAYEARAGSERARKMLRSDEEWIIYQAAKASGKDYTAFFAQRRDNPGDTQDLADTQRGTSDWAKLLGKPDAKRSELEEKVRKVQDKVLLKSTGRDGFLIDPDVQMSESLRREFSGLMYDFLQEQKRTGGSLDLDKAAQAVLASVKQIAIALPGQDGSLRLVRKPRLPDGQGELRDRPISVPGGEVYLPVKLKNFAEEEEDPLETYAEDMRALRDELPAALTVDGVEFSPDQVFLSDPGATGVPGLHYVSVPGRGPITFYPGQKLTLPPKDNHGGMEVRMPAMQNVETPSDPGQFQDFLKSRLPPGFHLIAEGVGGETFYRLAYGFRLKKDRAWAEEQQRRLRAQFDANKSETPDQAQPVPSSTAFGMGIGAGIHPGSIRPDGFPSADDPSGGR*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0026	shell	direct	high	2612	1.0	GCA_003349825.1_00984
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	346500	347048	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	22872	23420	GCA_003349825_1_2_336	GCA_003349825_1_2_336	-	463944	.	.	hypothetical protein	MGISAAAAAYLATAASAAAAGATAYMQNKALEAEAKAAEANAREQNRVIEQEALAAQQQASEQVSDRMRQAARQLSEARLLAAEGGGSFAARAYNIGVAADEDVSRISTGLKNTNSALRDEANAVRVSVDNANASFSTRANALRVQFLSEAVAAGADAYATNKRRAAELKVAKNSTQDYKIR*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0027	shell	direct	high	548	0.998	GCA_003349825.1_00985
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	347057	349378	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	23429	25750	GCA_003349825_1_2_337	GCA_003349825_1_2_337	-	463944	.	PFAM:PF11134.7	Phage-stabilisation-protein	MDTLLQPRIGALYQGVSRQAPLMRAPNQFEDLVNFLPAVDVGGAVDRPGTALVQSLVKANYAAGPHHFFRTTDGRRWVLLRGAAPSTLEVRNWDTGEVATLNMHPNVWSYLAAGTGDLKFLTISDTTLILNPAVTVTATESARPTLTVAYLVIRSVSSAKQAFIVSREAGPSATMALSNGNTSTRETVATSLANAINSTSALGLGASTLGNAPYIIKLTGSAAAIEMVMARNDWDGGAVTLIKGRVNSTADLPPAFEEGYPIAVDLAQGDRKSTFYVRFDLAKNAWIETSYLAHDAATATLNASTMPLRLRLSGANEFTLETCPWNPRTRGDSDSNPLPYFVGKRITALAHWKGRLLTACEDTIYTSQADDLFNFWRETAREVRASDPVKLPADAPGISVIRHIVPFRNKLIVTSDNAQLEVPGDQPFKPDTATMSVATRYNLDKDCTPVVVGDCLYYTGPFEGRAALWEYYYDDSAASNTAFDLSKHVPGFIPGKVRKIDGSAETGRVIVWTPQAPTALFVHTSYWTNGRREQNAWTRLEFPGVSAIWDFWVDADHLCIAAVSNTRLWLLQLPLEANLDGDVRLDFQSRATSVVWDAERVRVPLPAGLHETAGLVFAVPVEGGWFAEYTGTVVMVGSNRFLEIQAPLGETEGILGTRFPRSFTFSPFYPSIEELPTPMGRLQVRQVVLDMLRTGDLTATLKRKDRSPDLVVTRSPRVLGEHATQPIVGENVQVRIPFNSRGDAASLTVTATSTVPTAITGYTLLARYTNPLR*	hallmark_hmm	common_virus	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0028	shell	direct	high	2321	1.0	GCA_003349825.1_00986
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	349378	349950	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	25750	26322	GCA_003349825_1_2_338	GCA_003349825_1_2_338	-	463944	.	PDB:3J4B_E	Tail-tube-protein	MAYTKLEAINEILTSVGESAVLTYGQGASDVVNAETVLDLETRAVLSTGWECNTDEDFELVPDSDGRIAVPADALVVDPVDPYQRITMRKGYLWDKEKHTDVIGKPVRCRVVRDMAFEEVPYHVQRRIVAQAVVRYQNSYVGSPTLDKAAQANLAAADAQAQDIEADVDDYNILDNVDIAWHRRWTVRGL*	hallmark_hmm	common_virus	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0029	shell	direct	high	572	0.998	GCA_003349825.1_00987
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	350058	351065	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	26430	27437	GCA_003349825_1_2_339	GCA_003349825_1_2_339	-	463944	.	PDB:7Y23_A	Major-Capsid-Protein	MAFGDQSTPVIPGQNKGTGDDRALFLKIAGGEVLKAFTAATIMAGKTRERTISGGKEAQFPRTGVSKAEYLSRGQEMLGNPYLMGEVTVGLDAPLVAHHDIWDFDALMAHFDFRSPIVSDMGQALARTFDQNVMRAIILAARTPQQHAAFNDGGTVHQSADLLSTGNIDGFKWVQELRKVRLALIKKNLPANMPLYGVVSPDVIDAIKWAKDPNSGQYVILDRNFAGGNAADVAGVTETVRVAGITLMASTLLPNTDESSASDVFAKYRADYSNTAGIVWAPDAVATLTLQGLKMETARDTRRLCDVLVASRFNGHGTLRSEFAVELRRPAAGGN*	hallmark_hmm	common_virus	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0030	shell	direct	high	1007	0.999	GCA_003349825.1_00988
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	351228	352100	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	27600	28472	GCA_003349825_1_2_340	GCA_003349825_1_2_340	-	463944	.	PFAM:PF05396.10	capsid-assembly-protein	MTQVTIPVPAQAAASTSQGAAPGTPEYNAAMIALFEGQGAPASQAAQAPAAAPQGDQKPADQPTAQGGQAAQTPPENPQGDQKPADQKPGESEQKPDDQKPDETPKPKTLGDYLATPYTEFVGQDGQVKAEVREDLKTRFGITDEQIDAHFAAMKLADEQSARFTEMEKRLAELERERRTAVLHTYAGGQAQFEELIAWGNANLTPQERTFLNDQLNGPFAQQAIELLKFKRGATVQADPQIHTPTTGASGAQGGFRSQAEYLAAISDPRYETDHAYRQQVYSRLAVSDF*	hallmark_hmm	common_virus	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0031	shell	direct	high	872	0.999	GCA_003349825.1_00989
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	352100	353611	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	28472	29983	GCA_003349825_1_2_341	GCA_003349825_1_2_341	-	463944	.	PDB:8CK0_A	Portal-Protein	MTQASLQDRYAELTPERDAALRRARGCAAITVPAVLPPEGHTYQNNLPANYTSFGARCVTNLASKLLLALLPPGASSFRLNVPTKLLVEAGANSAPPEIVQGLAQVENLVNAKIEALGWRRPTFVTLLNLIVTGNLCEYILPDGRLKQYRLDQFVCVRDFAGEVQEIVTCEVMKARSLPEALKHRTQKRPEEDVKLYTQFKRLDERRYAIRQDLDESVVLPEEHYHGIMPANALTWDLVPSENYGRSHVEHNYNDLESLDKVAQGLREITAMASRHLTFVRPNATGGNLRKRIAEARNGAVLSGNIEDVNTLQFQSAGQYQLLQNQEEALKRDLAQAFLLTSALRRDAERVTAYEIRMLVQELESALGGTYSLLASTLQAWRLRKLIAQMRSRRELPDLGDDAVEIVVTTGLEALGRDEQLNRVRAFLELMNSATPFTDEVPLFVKLDEVLTPGAVALGFPAAIRTSAEVEEMKRAQAQQQLMQQVAGAAAGPLATAAVQSEV*	hallmark_hmm	common_virus	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0032	shell	direct	high	1511	0.999	GCA_003349825.1_00990
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	353608	353796	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	29980	30168	GCA_003349825_1_2_342	GCA_003349825_1_2_342	-	463944	.	.	hypothetical protein	MGKPKAKAPPPPQQKELQVAPILEDAVAEDEDPQKKRVTRSSLRFQYLTEAPAQKGSGVTIV*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0033	shell	direct	high	188	0.995	GCA_003349825.1_00991
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	354159	354407	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	30531	30779	GCA_003349825_1_2_343	GCA_003349825_1_2_343	-	463944	.	.	hypothetical protein	MDYPDDSGLPSGLPAPSALRILAAHLAAQLPTEEALSLVKRKEYPLIHELAGYHEAVDAINAIAEQLEEAAREAQKAQGLSL*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0034	shell	direct	high	248	0.996	GCA_003349825.1_00992
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	354424	354960	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	30796	31332	GCA_003349825_1_2_344	GCA_003349825_1_2_344	-	463944	.	PFAM:PF03245.12	signal-peptide-motif	MSTRLKVLLIALAAALAALLVTQWRSSLIELGRMEERAAAAERLAQERKYREEAVAKAEAESRARFDLKLAELQRDHDQILQRLQAELHDSELRNVRLTRELARLHDAAATGVGTAPATGPPGGEAPAPEDVAGPTGADLLMVATENYAICHRTAAQLVELQDWYEALRLRLQASPGK*	phrogs_hmm	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0035	shell	ambiguous	low	195	0.363	GCA_003349825.1_00993
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	354960	355670	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	31332	32042	GCA_003349825_1_2_345	GCA_003349825_1_2_345	-	463944	.	PHA02575	deoxynucleoside monophosphate kinase; Provisional	MTSQTDRSHLDCGDCKYHAQGYMPPTCRSCMNEQERTGQWLPLFDGLPAENRRPTEQPLLIGLAGRARSGKSTVAGYLARRYGFIELSFAAPIRTFVADLLDLSVKDLEGPEKEKVVDWVGKSPRYMMQTLGTEWGRRLIGEDFWVKRVLRRVREVTGCGFPVVISDVRFDNEAEAIRAAGGHILHISRPGAPLVCGHVSEAGVTAHLGDYSILNNGSIEALHRQVELAVRYFRTL*	mmseqs_cdd	common_virus	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0036	shell	direct	high	710	0.999	GCA_003349825.1_00994
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	355654	356445	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	32026	32817	GCA_003349825_1_2_346	GCA_003349825_1_2_346	-	463944	.	PDB:5HML_B	Exonuclease	MTLALIDGDELILKAAVIGTEEIDWDRGAVEKRGPTFKEARSTLESMLESWVEAAGADDYLVVLSPDDRKLFRRGLFPGYKAGRGEKPEHFWKLVRYVRDAHPVRSFPGLEADDTMGLLSGPGKVIVSSDKDMKTVPGPLYNPMKGTRGVISAQRADFQWMLQTLTGDPTDGFEGCIGCGTAGALAVLDKATDLAGWWPLVVERFCKPKTKRYAAFPQGESDAVLQAQLAHILRPGEFDPESGRVTYRLGRKSITFNAYDLAN*	common_virus_hmm	common_virus	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0037	shell	direct	high	791	0.999	GCA_003349825.1_00995
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	356442	356600	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	32814	32972	GCA_003349825_1_2_347	GCA_003349825_1_2_347	-	463944	.	.	hypothetical protein	MTAHNDSRRTARLKLLYLIPLTLLAFVPYLLACAWGLLSELADGVRNAWNHE*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0038	shell	direct	high	158	0.994	GCA_003349825.1_00996
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	356597	357058	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	32969	33430	GCA_003349825_1_2_348	GCA_003349825_1_2_348	-	463944	.	.	hypothetical protein	MKPTEKFAKEYAEVQELLKHHPEVGDFTVVGSSRIVEDPQDLDVLVLLPRRHGNEGTSLARDAEETALAAFGQDWQACRESYELLGHHWCALRRGPINLIVTTDPDWFSRFRRADEVCVALKLTNKADRKVVHRIVRDGYDAKLAVACATVES*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0039	shell	direct	high	461	0.998	GCA_003349825.1_00997
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	357045	358931	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	33417	35303	GCA_003349825_1_2_349	GCA_003349825_1_2_349	-	463944	.	PDB:2KFZ_A	DNA-polymerase	MTDDGILLFDIEGDGLLDTLTTCWVLCISGPDAATVEDVDAYTDHDPAFPAIRVGIDRLKRHVEEGGKVVAHNGIGYDAQALEKLYGLVLKPWDHLLDTLVLGRLHNPSRPGGHSLGSYGAEFGVPKGEHDEWDRYSRKMLDYCRQDVVVLAALWRKLKGVMTWGESPELEHRVAHLIELQRANGFRLDLPKAIQRAAELDDECQRLRLKLSEVFPPIYVSTGTRVPKRNLNTKPKDGSVAMSYTAGAPYTAIKLQDFNPDSEFHVARRLKAKYGWEAPLTEKGNPNITEAVLKKLDFPEVSLLLEYFRKNKMWTQLAAPPKGSSKGGWIQHANERTHRVHGYVNSNGAVTGRMTHSNPNSANIDKELRDLWIPGEGFLQVGTDAEGLELRMLAHYLYPYDGGALTRALLEGDKSKGTDAHSMNRKNTDLFSRDGAKTLLYGSLYGAGDEKAGAIWVADWRSSGKPESEWPAWALNSRGKLKPLKAIGKEVKRRLIDGIAGFGQLIEDVQAAAKKRGWLRGLDGRRIRVRSQHAALNTLLQGGGAVVMKKALELYHRRVTEEFGWVHGKHFGYLANVHDEVQQEVLPELAETAGKEFALAITRAGEHFNLKCRLDGAYDIGTNWHETH*	common_virus_hmm	common_virus	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0040	shell	direct	high	1886	0.999	GCA_003349825.1_00998
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	358928	359113	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	35300	35485	GCA_003349825_1_2_350	GCA_003349825_1_2_350	-	463944	.	.	hypothetical protein	MSNTRYELKVDPTVAYTRTIFVPNTENILDAADFAVTDVVQRARAAGRKPVMVEVTVRVAP*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0041	shell	direct	high	185	0.995	GCA_003349825.1_00999
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	359110	359433	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	35482	35805	GCA_003349825_1_2_351	GCA_003349825_1_2_351	-	463944	.	PFAM:PF09665.9	endonuclease	MKTRPSDPRRRLVTLAKYRAKKKGIPFGITYEDVYVPRYCPVLGIPLRSGVGVACDHSPTLDRIDPDKGYVRGNVVVISNRANRLKGDAGWRELVRIAAFYQQLDSS*	phrogs_hmm	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0042	shell	direct	high	323	0.997	GCA_003349825.1_01000
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	359414	361072	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	35786	37444	GCA_003349825_1_2_352	GCA_003349825_1_2_352	-	463944	.	PDB:5IKN_F	DNA-polymerase	MSERDGSTLLHKGPCSECGSSDACAVYDDGHAHCFSCGTHFRNAEGPGTPREPANPELIQGGRYVDLPKRGLREETCRRYGYVVADFKGKPCQVAPYHDAQGRLVAQKLRFADKSFIVRGRLKEAGLFGQHLFRHGGKMVVVTEGEIDALSVAQALALKWPAVSIPNGAHGAVKAIKAQLEWLASYDSIILWFDNDKAGRDAVAAVAPLLPPGKVKIVTAPGDCKDANDVLTRVGVSEVQRLVWDAPTYRPDGIVMGEDIELSRLQTIEKGWQTPLPELNRMTGGIHEAELWLLTAGSGIGKSTTSREWLKKALEDGIPCGAVFLEESKETTAKALIALDQNTPLSRLRENPSILTPAQWEASYRKLIANGRYFAYDHFGSVESDNLIAKLEYMAVSCGVKLCFLDHISIAVSGLDMDEGERRAIDILMTRLRSLIERTRMSVIAVSHLRKVGGDAKSFEQGGQIDLDSLRGSGALKQLSDTVVAIERDQQAEDNEERDKSRVRLLKCRFTGMTGLADVLRYDRNTGRQVVLTAFPDSVDTPADKDDEDPPF*	rep_hall_hmm	common_virus	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0043	shell	direct	high	1658	0.999	GCA_003349825.1_01001
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	361069	361254	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	37441	37626	GCA_003349825_1_2_353	GCA_003349825_1_2_353	-	463944	.	.	hypothetical protein	MSHPNISAPITVRAGGITAVYQGRGRWAVKSRRVNAKTLTHGELLGFLPDYTRPRRSKGAK*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0044	shell	direct	high	185	0.995	GCA_003349825.1_01002
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	361336	361470	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	37708	37842	GCA_003349825_1_2_354	GCA_003349825_1_2_354	-	463944	.	.	hypothetical protein	MNQHIHPELSDESPDPNFIDFNSDEPLPVCPTRNNGDDTCESCQ*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0045	shell	direct	high	134	0.993	GCA_003349825.1_01003
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	361467	361691	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	37839	38063	GCA_003349825_1_2_355	GCA_003349825_1_2_355	-	463944	.	.	hypothetical protein	MSYLKSLFCPTVDSVLAGINNLVKRLERVAKRSAEAAVAERRAIVSAQKRVEALDNETCRALETAQRIRETFRL*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0046	shell	direct	high	224	0.996	GCA_003349825.1_01004
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	361688	361876	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	38060	38248	GCA_003349825_1_2_356	GCA_003349825_1_2_356	-	463944	.	TIGR04438	small Trp-rich protein. Members of this bacterial protein family average 80 residues in length, and average nearly 6 Trp residues (two of which are invariant) in the first 45, which are strongly hydrophobic. Past this region, the protein is highly charged, with large numbers of Lys, Arg, Asp, and Glu residues. Members usually are divergently transcribed from a gene encoding a c-type cytochrome.	MVWFFTALSVVLAMLKLIGIEPVAAWSWWAIFAPFIGSLALAVSVAAILLVAFLCFYSKASP*	mmseqs_cdd	nonviral_gene	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0047	shell	direct	high	188	0.995	GCA_003349825.1_01005
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	361876	362109	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	38248	38481	GCA_003349825_1_2_357	GCA_003349825_1_2_357	-	463944	.	PF14090.6	Helix-turn-helix domain	MNIKLLTPQAARVLEHMRKTGSITNVEANAVHRVRSVSRRITEISRALEGSDYEIRREFKRDVTGQLYVRYFLVKSR*	hhsuite_tools	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0048	shell	direct	high	233	0.996	GCA_003349825.1_01006
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	362106	362501	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	38478	38873	GCA_003349825_1_2_358	GCA_003349825_1_2_358	-	463944	.	PFAM:PF05866.10	Endodeoxyribonuclease-Rus	MTRDEETGEVSIVINITPQPTPRPRVAKFGTYYPATYKAYIKELDAMIPPAAVALEGELLVEVEAVCQPIKKSKFTTPAGDVDNLAKGVLDMLTKKGFYGDDRQIVDLHVTKRFPRDDEQPHFRISLLEIE*	common_virus_hmm	common_virus	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0049	shell	direct	high	395	0.997	GCA_003349825.1_01007
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	362509	363096	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	38881	39468	GCA_003349825_1_2_359	GCA_003349825_1_2_359	-	463944	.	PDB:1JE5_B	DNA-Helix-Destabilizing-Protein	MSKMKTVEKGVTPRGTFQWAWLDKPDTKFDKSKYKVTIILEKGVPENDAFAKRLNDLHKAAKGNAEHRPAKDGDALAEDDEKKERFRGHWVVTFKTKNKPELRGPGGKNDVLAVAPRSGDYGRVAYAVAESGQGSAYRGVILYLNAVQLLERRAVSSGADMFEDESDEFGPDTARAESDPDVDGGTDPDDDASDF*	common_virus_hmm	common_virus	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0050	shell	direct	high	587	0.998	GCA_003349825.1_01008
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	363123	363467	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	39495	39839	GCA_003349825_1_2_360	GCA_003349825_1_2_360	-	463944	.	.	hypothetical protein	MEHYSKQVEQDLLVLTQVLTVSFAGLIKEVAKLGYADSQGQASDDDLSGPAHGKRLYYASLLALATVAANLRDLAQIPDEAWEEANTLAADPNSLTNTTKLLPRAQAVYAAVMN*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0051	shell	direct	high	344	0.997	GCA_003349825.1_01009
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	363470	364108	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	39842	40480	GCA_003349825_1_2_361	GCA_003349825_1_2_361	-	463944	.	.	hypothetical protein	MSLPMRYNTAEELVADFEAGAGFRVVGLVSGNAYIVTDIRLVPPRRSTAGFVVESRAGAYAYFDLNGEDSLHGMRLEKIAEAPQQAAVIPLPGFYVARYAKDTGLPEFSAQPKRHDTYEKAAREAQRLAQKVPGYRFGIFESRDERYVAPPKPKRRYRLVSFQLQDGDIDSRLYPLGDSYSTPPRFNVGDPFKTGRGDATVVSVHEFAVAVK*	.	hypothetical_protein	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0052	shell	direct	high	638	0.998	GCA_003349825.1_01010
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	364156	365844	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	40528	42216	GCA_003349825_1_2_362	GCA_003349825_1_2_362	-	463944	.	PDB:1MSW_D	DNA-directed-RNA-polymerase	MPALTGGYLTLRTNAVKGQLNPHTAALDRPLTGAALEALNWVQKTRWKINKWVLDVALQCRDEGIPVEGLPRPDNIPLPDPLPEDVYAALPKEEQVKRRRQMEEIHSKNASLMGQRAAVYRRLSLAADLASFPALWFPHFCDFRGRLYPIAQELHPQGDSLTKGLLTFAEPVRLGANGQWWLYVVLANAMGHDKLPLQERADWTDNNLNLILATAKDPLAYIDFWAHEDVDSPWEALSLCFEVAQLCEWAALGNRVEDFESTVPVRLDATCSGIQHLSALMRDEASARCVNVLPTGKREDIYSDVANKVKQFVATDAAKGNPLAVQWLGKIGRKTVKRAVMTTPYGVTESGIAEQLVNDGFCNHFRGEDRRKAAAYLRDCIVGALDESIGQPRRAMQYMQDVARFLAENNLPLQWTTPAGFTVRQAYYETHETRVETLIGDVSLRREKPEAGLVVRKQCAAAAPNVVHSFDAAHLCRTAVAMKRDGVRDLAFVHDSFGTHAGHTDTLSQRLREEFVAIYSRPALEEWRQSVIVHSGRDDIPPIPKLGALDVSKVLESEFFFS*	common_virus_hmm	common_virus	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0053	shell	direct	high	1688	0.999	GCA_003349825.1_01011
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	366138	367034	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	42510	43406	GCA_003349825_1_2_363	GCA_003349825_1_2_363	-	463944	.	PDB:1MSW_D	DNA-directed-RNA-polymerase	MQQADSPDQGLRVPPKVPLVKQPSEIVPVGPHDHRAQREWEHYQVAKGIERYRQTLQKVHEDGRVTRRGLQDLEPGQVIAKELIGPLVERIRQAQQAPMEKIGTRLTLSDAEWGLSLLPAETLAAVTVLHALSRAEPGPFTACAIALGTRVQHEWEYQNWKAAEAAAEKERKQKDPESQVPNLFKLMLARNNRQINERIFAKWKKKAPLFCAVNWTTNLRAHIGSVLLGMLVESNAWFEVVVERVNMRQTRIFRMTELGMAWVADRHQQNELMRPYLLPMICEPLDYDYSGEAHPQLA*	common_virus_hmm	common_virus	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0054	shell	direct	high	896	0.999	GCA_003349825.1_01012
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	CDS	367616	368464	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	43988	44836	GCA_003349825_1_2_364	GCA_003349825_1_2_364	-	463944	.	COG1414	DNA-binding transcriptional regulator, IclR family [Transcription]. 	MPRPATAPPTEAPARAPRARRQRVQAAATGVAVLKGLSRLGGRASLTRLAAHLGESPAKVHRYLISLLEAGLVAQDAVSQHYYLGAETIQLGIAAMRQADPLRAAEPSLARLREQLEVTCFVAVMGNKGPTIVRFEEPALPVTLNVRVGSVLSLLWSATGRVFLAMTHDGRVEALARAELEAASAEQRRGLDPRDPIGTLRTQVRAAGVATVRDTYLPGVSAVAAPLIDYTGQVRAVLTALGATGGFDPSPQGPIARTVREEAEAVSRSLGYRPQEDAATAP*	mmseqs_cdd	nonviral_gene	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_CDS_0055	persistent	direct	high	848	0.999	GCA_003349825.1_01014
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	2	160	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	3	161	GCA_003349825_1_9_1	GCA_003349825_1_9_1	+	178907	.	NF033516	IS3 family transposase. 	QHLFTRLDDVREAAYWWMLEYNEERPHDSLGNLTPAEYRQRVAGSSTFEMPA*	mmseqs_cdd	nonviral_gene	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0001	.	unmatched_CDS	none	0	0	.
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	868	2376	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	869	2377	GCA_003349825_1_9_2	GCA_003349825_1_9_2	+	178907	.	PDB:1Z19_B	Integrase	MSEKYTFRSKVDIFGVPAPTNKPAIEIWHETLPGFGVRIGKPRADGVVRRSYISRVPRLQPDGTFKDEKPVLGLVEDIGTGDRVLSYKDAELEAMRLVREAKLLRSGGTVRMTVGQAYERLLQSLESANSQDSPAYGDKMRKTYERFLSHLSKRYLDELKEGFWIDYLTSVREGRLDVGVVTKDDSTEERVFRKAPSANYSLGILNTASRLYKIAHEYRGIEGESRDWDPTRAAAQKIEEPNTRETYLLLKDIPKAWHATDQLMSPWWRDLWRVYLLTGLRDRLVMDMRWEQIDFERGLYLIQPLQRGTKRRRKKLSQVDRLKPIEMPLSSYVLSILRRRKQFAPSGPAGEWVWYSLETERRKTKDLPRLTDPRASWKRLVPILGYWVYKHDLRRTFASLGATVDPGGVLALSLLLLHSSKGIASALGIPQITVEYIKGQQEQMRALTEKISRAVLELAGEVSQTELTAHLREFADLPPAVDSALRLEEKAPERGQDVTDST*	common_virus_hmm	common_virus	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0002	shell	direct	high	1508	0.999	GCA_003349825.1_02789
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	2427	3599	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	2428	3600	GCA_003349825_1_9_3	GCA_003349825_1_9_3	+	178907	.	PF04326.14	Putative DNA-binding domain	MDDSLLDALRYKSEGPDVDFKEAQYRFENGNDATKSEMLKDILAMANSWREGAGYIVLGFRDRRPHPAEVVGITEHIDDAKIQQFVNSKVKPKLEFRYEEHVYDGKTVGVISIPKQKRPFSISNDFGKLRRNIVYVRRGSSTDEAEPIEIAAMAAADAGRGPVDVALDLITRDGEPFPGSFSLDFFEFTEQMPDYRSSRANAIINPLRQGTTLDNEDFWRQLAEFARCYGALIEMRFALRNHSGQQLTNTKLEVTVEGVDGLACDMLTGDDLPEPPTEIRRLGLSADIRTIPDLLLADKPGVATIKEEEGNAPSCHVRFGVLLPGEVLRSSNTMALVISGPGQVRLKCRILAAELSVPVTFVHEIEVAGTVRRLDFEGFKAYLAAKGLPV*	hhsuite_tools	hypothetical_protein	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0003	shell	direct	high	1172	0.999	GCA_003349825.1_02790
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	3686	5197	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	3687	5198	GCA_003349825_1_9_4	GCA_003349825_1_9_4	+	178907	.	COG0286	Type I restriction-modification system, DNA methylase subunit [Defense mechanisms]. 	MSLVEQAHRAGRAFTDGLARDEQKELGQFMTPPAIARFMARRLVQDYEGRVARILEPAAGAGILAAATVEELLARPTKPERVELLLFEYDARLLPALEQLRHGLREACASARVGFDCKIEHGDFLLSHTALSGTPINGLLTIANPPFFKLNKAADERATLHSYAVYGQPNIYALFMAACARLTPPDGRWCFITPRSWMSGTYFKATRQSLLRHLTFDGLHAFESRTEGFEEDSVLQETVIAWARGRSQVEAGTSILFTRSQGVADLDSAEVQAVPATRVVSNDEHAMLSLPHRQEDLFAGWTATLKTYGLEVSTGPVVAFRAKKFIRETAERGTVPLLWLQHVRQQSIRWPVQKKREHILANAESAWMLVRNEPMVVMRRFSPKEDERRVTCAAYGCSPDRLPGDVIGLENHLNYIYRPGGRMTVFEARGLSAFLASKVVDDHFRGLAGSTQVNATELRKLPLPPLAVIEEIGERISMSPTLAEIDAVVNAVLGVGKRAQVAA*	mmseqs_cdd	nonviral_gene	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0004	shell	direct	high	1511	0.999	GCA_003349825.1_02791
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	5194	6264	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	5195	6265	GCA_003349825_1_9_5	GCA_003349825_1_9_5	+	178907	.	pfam06616	BsuBI/PstI restriction endonuclease C-terminus. This family represents the C-terminus of bacterial enzymes similar to type II restriction endonucleases BsuBI and PstI (EC:3.1.21.4). The enzymes of the BsuBI restriction/modification (R/M) system recognize the target sequence 5'CTGCAG and are functionally identical with those of the PstI R/M system.	MSLPPLLPIGDIQARLEQIFPPGLDMRQYLTREMAARTVYVFLYGGMIEGVGRLLRPSHIYFYTEEQAAKTGDEDREYWFKHATKPGWRPEGRRWYADTTREPIRDETIRYGLLDIGAVDKVPNVAVTSSSPIYYLKSDFAALFNPSLNGSALDAAIQQWQRRHLTPAARARMAMLAQGLAKRSDEVHVRCPDGTVARLSPGLSSLISKAVVEEFAQNFLPRPVLLWLSESGNKVRHQDVRVAQALGLRIDAATALPDIILANVGDSGEDTALIFIEVVASDGPMNEVRKTQLLEYVKASGFPTKQCYFGTAFEDRADSAFRKALPTLAWGTFAWFRSEPKHILMLFDRPFPIVSA*	mmseqs_cdd	nonviral_gene	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0005	shell	direct	high	1070	0.999	GCA_003349825.1_02792
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	7089	7298	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	7090	7299	GCA_003349825_1_9_6	GCA_003349825_1_9_6	+	178907	.	.	hypothetical protein	MSNFDEYSKNILRTLFKLAFCNESTEPTTLEAQALMQIEAVEAMKTYRQVFSEQLDMDFADSDFYSLTR*	.	hypothetical_protein	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0006	shell	direct	high	209	0.995	GCA_003349825.1_02793
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	7438	8046	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	7439	8047	GCA_003349825_1_9_7	GCA_003349825_1_9_7	+	178907	.	.	hypothetical protein	MNACSTAERFYFERNSEISAELALSILKNSVDTDDITYLFSLKISPEDWSAAHAVGLARTALAKARGCNSSAYRRGADDERIDTEGALAEIALYAVLDSSEALTAPLVTYRPEPAADLEFEGLSFDVKSVSQSRTSVCINARAHHTRPVSAYLLARITSERVIDVYAVGHAAVDKWTLRQGFSPYYSASMPPAPPFPVYEED*	.	hypothetical_protein	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0007	shell	ambiguous	low	287	0.471	GCA_003349825.1_02794
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	8080	8376	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	8081	8377	GCA_003349825_1_9_8	GCA_003349825_1_9_8	+	178907	.	.	hypothetical protein	MRKAARTPRSLRHKCRVATRSLTVWFSALVPILLAAAEALRDQLPQLSDYLTGWRMVAASVVVSAIVAALRVRSVTASNFDIETDRARCDFDVETGDK*	.	hypothetical_protein	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0008	.	unmatched_CDS	none	0	0	.
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	9001	9285	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	9002	9286	GCA_003349825_1_9_9	GCA_003349825_1_9_9	+	178907	.	.	hypothetical protein	MSTATNSHDISAQVAELRAEMRSENANTRRTLERVAAAVDKLSAIEAQNTARDSKLADHEARLRRLEANWLKFAGVLALLSAVGPALAHKLGWL*	.	hypothetical_protein	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0009	.	unmatched_CDS	none	0	0	.
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	9285	9479	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	9286	9480	GCA_003349825_1_9_10	GCA_003349825_1_9_10	+	178907	.	.	hypothetical protein	MSKRAADKLQLLSLDGLPANPLDHPLAHRIVGLRAKGKGQRAIADSLKLEHAYVRAVLKHYGML*	.	hypothetical_protein	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0010	.	unmatched_CDS	none	0	0	.
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	9480	9977	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	9481	9978	GCA_003349825_1_9_11	GCA_003349825_1_9_11	+	178907	.	PFAM:PF05331.10	Rnase-E	MRRTKNDKKKAVTTDRRLQALELRKQGKNFEEIAAALGITKSAAWQLVDGALRDYNNAVKESVDELRQVTLLQLDDMLANWLPIARAGDDKAAGIVLKTLGERAKLMGLYAPTKTELTGKDGGPLETANLNAAVDLAKLSDAQLAALESLLSAAAPGSGTGGSTP*	phrogs_hmm	hypothetical_protein	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0011	.	unmatched_CDS	none	0	0	.
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	10582	10935	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	10583	10936	GCA_003349825_1_9_12	GCA_003349825_1_9_12	-	178907	.	.	hypothetical protein	MKTFPRRSVVSALTGAHPKIAVTRSSDGNYSVPTVSDEEHAARFDSAHDLARQFKDYCLRKQRDSPSWTQAQCYEHACCGLDAKAFAWDLLPDERAWIKQRLRTLLEAEGWAGLPSI*	.	hypothetical_protein	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0012	.	unmatched_CDS	none	0	0	.
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	10995	12545	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	10996	12546	GCA_003349825_1_9_13	GCA_003349825_1_9_13	+	178907	.	PDB:8DGC_F	Large-Terminase	MTRAAASSTLKNATRPSLKASGLPTLAQIQRERHRRSFYEFFKDFWGEIEPEEPYVDSLHIKVLCDHAQAVIEGRIKSLGVEIGPGYAKSLVMAVALPAWVWGPHGRPGYRFGYSTYEYELTVRDSTRTRDLIKSARYQALYGHVFTLTKERENWIQTSAKGFRLATSVGGAATGHRVHLWVYDDLLNAKKARSDAALAEVHEHLRATSTRGVRPSEYARICIGQRLHEDDAGGWVRERGFEVLCLPTEYDPSRHCRTSIGFSDWRTERGEFLFPARFGQKEKEQALRDLLPGGYSAQHQQLPIPAEGGVIKSEYIKVFEREHLPPISHYFVSVDTAQGQDKTNDTTAISVFAVHASGIVLVDGWTGREPAPFVIQRLKDLGQKYNPVAVVIEQKDWGKAMLQLLDGDPGFRWRLVPYVPVVGKNARAEEASPFFFKGYFAVIKSDTLSEQLVAQLVVFPAGKVRDLADSAIQAALYAQLTYTFESRLTASMLDYEGGKRASRTKGSLYSIYDDDD*	hallmark_hmm	common_virus	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0013	shell	direct	high	1550	0.999	GCA_003349825.1_02795
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	12545	14203	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	12546	14204	GCA_003349825_1_9_14	GCA_003349825_1_9_14	+	178907	.	PDB:5NGD_C	Portal-protein	MLEQKNVGALLKAPAKPAELQTQVATPAPVYDPAMPTGEVRRAIDASISGELTPLGVLARLALAKRGNTSAFVQLVEDVLERDINYIAARETVTESIDAALLVAEAGGPLARDKRIAAEVQALLDSEPVQAAIGHFCGFEDFGYAAAELIWSTSGSKWSIENIIPLPPVWLTFDKRDGRTPLLLPAREGDMPQPLAHGKFVYVARPSYGLPFLRSHGYVGAFYKALKSMTLKDWAGFLEMCGQPLRVGYYDPKTIPNAADLRAVQRTLRRALENLGADAWAMLPEGTKIQFVESATKGASAAAFEDLARYLDEQVTKRITGSVLATGTGNTGSGGSQALGNVHNDKFVRKLKSTAAVVAKAIRQHIVAPYVAFNYGADVPVPVVRFAFEEPEDVVALTNALKELVPLGLEVSQEEIREKLRLRAPAEGEARLASPASPAVPADETSQGAGFSAHGKSAATGNTQTFASAEEQDEIDVLIAAYTADDGYVRADEDANSALLSAIESASSVEELKAALLAAVKDADVRKFQDALTGALLTSQAAGEFGVKVGGD*	hallmark_hmm	common_virus	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0014	shell	direct	high	1658	0.999	GCA_003349825.1_02796
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	14205	14945	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	14206	14946	GCA_003349825_1_9_15	GCA_003349825_1_9_15	+	178907	.	PFAM:PF04233.13	minor-capsid-component	MSLTRAQKTAVAKALEFLRAARVDVRDRKVRDRLGILARQNYDETSYIARLVLANKAAKVLNRIAAAVREGRLEANLGDKEKLRQIAGEALTDAKAYIILRNSFATAYNAGRHEQQKRDRTRPYLLYRTMGDAAVRPGHRLLDGVLLPKSHEFWATHYPPNGHNCRCRVDGLTKRQAEALVEAEGSRVRTSPPRERLVRYVDTVTGKRMTTPESIDPGWIGAPSSDPGRFAKHLERALQRLERQAV*	hallmark_hmm	common_virus	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0015	shell	direct	high	740	0.999	GCA_003349825.1_02797
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	15672	15782	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	15673	15783	GCA_003349825_1_9_16	GCA_003349825_1_9_16	+	178907	.	.	hypothetical protein	MGISTRFIEFIVTLSAAVFMLSLLFPSEFGNGDQDD*	.	hypothetical_protein	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0016	.	unmatched_CDS	none	0	0	.
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	16025	16339	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	16026	16340	GCA_003349825_1_9_17	GCA_003349825_1_9_17	+	178907	.	.	hypothetical protein	MGSFNVFVQIAVLAFVIYSVSELAKAGIQMHREGFINVHASLFVLAIAGFGGKYVTGTAEGAVASVGCAAAALLAAAILKRALSIVAKNEAARKQRARRDTLNH*	.	hypothetical_protein	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0017	.	unmatched_CDS	none	0	0	.
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	16488	17285	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	16489	17286	GCA_003349825_1_9_18	GCA_003349825_1_9_18	+	178907	.	PF07042.11	TrfA protein	MSLSPANAPLWHSFEARESLDERAFYAAKSLPKFYRDTLAFEPVLLKSNLFRPASGARTRYDVFTELKSYNNTRIEYRGEELRQDDLRVLLTLLKLRSGDVVSNAIEFTPRTFCRDVLGWADSSDSVAKLKACILRLQDARARVHFKGGMLAMSFVSDAVLRSNDAWTVWLSDLLLPVFERNLTYLKASERLAMKDGLESWLYGFIKADSCTLEFDLSTMREAAGSTYEQKDFNKHVKKVLEGFEADGIVASFEVSKGKLKVRKS*	hhsuite_tools	hypothetical_protein	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0018	shell	direct	high	797	0.999	GCA_003349825.1_02798
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	18337	18660	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	18338	18661	GCA_003349825_1_9_19	GCA_003349825_1_9_19	+	178907	.	.	hypothetical protein	MNNTYNGRTYSCEFEVEPGTPRVMRPLVSGPATLAVHAVGEGVSAFVELTISPPSRLEDGTARWVPAAGFGEEGVISGSAVLDIVPSNITAVRVTAEGGNVIVEMLQ*	.	hypothetical_protein	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0019	shell	ambiguous	low	3	0.009	GCA_003349825.1_02799
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	18657	19640	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	18658	19641	GCA_003349825_1_9_20	GCA_003349825_1_9_20	+	178907	.	COG3055	N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis]. 	MSVFSRSGGGGALRGEIRRFVGPTAPAGWSKVAGEPDSMGSAGTFALVPSFTGHWSAAATGQRLHIIGPAAAGMRHQVYDSLTGSWSPRTEPAAYAAPYAGVRPGAFVALPDGRLFMASFGSTSASRSAAIYDPELNAWTSVADMPVQSRGGFGVLLTDGRVLVVETTHSFIYDTAANAWSADMAVPTALSANLGLGLVVLPSGDVLAMRGNKYAIFSVATQIWGPVLTQPLPVTAGSVPVLLPSPEGALCYAISGASPSAWQPVIRFTEATGAWDQLVNIATPASSAWVNPAPFPGGGWLLSVGSGMWSRLVENYQPVGNCFAAKD*	mmseqs_cdd	nonviral_gene	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0020	shell	direct	high	983	0.999	GCA_003349825.1_02799
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	19644	19841	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	19645	19842	GCA_003349825_1_9_21	GCA_003349825_1_9_21	+	178907	.	PF16250.5	Domain of unknown function (DUF4907)	MQVPVYTYRAIPGGFQILADGVLCHHQPFQAGVPGFQPYPDEASAQAAAEALISALQVPPLGEGT*	hhsuite_tools	hypothetical_protein	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0021	shell	direct	high	197	0.995	GCA_003349825.1_02800
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	19983	21104	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	19984	21105	GCA_003349825_1_9_22	GCA_003349825_1_9_22	+	178907	.	PFAM:PF10123.8	head-maturation-protease	MPQKLLKQAFSVGLKPAPTKTVTDADGNTVTLHALPILPASPFRPVDSRAGIEFSYDADALIADYERRGRRIVLDVDHLTEGYGVDSRARGWSVALTTAARERDAGLEDGPLYGWFELTDLGVEALSKKHYGYTSGVALGRWLDETHFVFTRIKSLALTNNPATEMPQAFTADNSDDDSDLQAGAPYTTQQTADKEAEMLAKILDQLGLAADADEAAVLDAITALTAAKTKADEAAAAFAAAGVDDVTAFAAKSGETSQALSAAQAEVAALKVELQAFKAAAADQAAVAAVDAAIAACKITPAQREAMLKFARADVAAFTAAMEAAPAVLSADKTAQAPAAGSQDVALTDAVKEYLTKVVGVSEDVYVAGASE*	phrogs_hmm	hypothetical_protein	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0022	shell	direct	high	1121	0.999	GCA_003349825.1_02801
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	21140	22123	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	21141	22124	GCA_003349825_1_9_23	GCA_003349825_1_9_23	+	178907	.	PFAM:PF10124.8	Major-Capsid-protein	MNLPEKVRALFTTYQGIFKNSLRSPSLDVQKYATKVQSTSSTNTYAWLGQSTIFRKWVGDRVAQTVARLGYVIPNQTWEMTQVVPRESIEDDEVGIFTPLIEDMGLSAANHPGQQVMSAYYSGDVNLCFDGKAFFAKDHPLKFKQDGTPADGTPTFSNLLTPASEEDYGPKWVVAALGRPIKPVIYQERRAAHLVSKTALDDETVFRTNNFEFGADKRDAVGYTLPQFAVMSRKPLTAQNLAEAFSALEKMVGDKGQPLGIVPTDLICGPELRNEAEELLLTDRTTGGKSNRWKGRLNLTVTQYFGPLIEGPENEVPEEEEEAPEQQ*	hallmark_hmm	common_virus	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0023	shell	direct	high	983	0.999	GCA_003349825.1_02802
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	22566	22991	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	22567	22992	GCA_003349825_1_9_24	GCA_003349825_1_9_24	+	178907	.	CDD:cd08053	head-to-tail-adaptor	MPTQYLTPEIMYETFGEASIAKVVTTTGVDFEAFLDGINQEIDAYVGAAVPLPPSEAAIKVVQAAAADLARYRLFRDAASELMRDRAEDAIKFLSGVAARKLALPMPADDPTTPEDESGLAYVAECGSAQRRMQRDQLKSW*	hallmark_hmm	common_virus	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0024	shell	direct	high	425	0.998	GCA_003349825.1_02804
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	23004	23477	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	23005	23478	GCA_003349825_1_9_25	GCA_003349825_1_9_25	+	178907	.	PFAM:PF05069.12	Virion-morphogenesis-family	MANGLKVKANLAPVNRRLEKLRAALTDLRPALENAAKELTRRVWYRFAFKRDPDGGRWAPWAPSTAAANRKHPRRRLMLDTRQLRDKTRFIPGRRDLRAVIGTDYGKYHEQPDGKHGRLPRRAFLFSRLGTRRGLAKSDENYVLNALRYQLRKAAKD*	hallmark_hmm	common_virus	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0025	shell	direct	moderate	242	0.511	GCA_003349825.1_02805
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	23481	23909	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	23482	23910	GCA_003349825_1_9_26	GCA_003349825_1_9_26	+	178907	.	PDB:2GJV_C	tail-completion-protein	MQTDTYFALEPLLLERLRTIPSLAVISVTDADDKTLFNTVEPTAVVAFQGDSRKDSNDFAVLLESRWSVSLFIRGHGAKERSVEEGQLLMSIVQALHGWCPGDGFGSLELQGTDPESYDGGTLREYALLFSVDTTLYTRGGR*	hallmark_hmm	common_virus	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0026	shell	direct	moderate	296	0.69	GCA_003349825.1_02806
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	23965	24666	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	23966	24667	GCA_003349825_1_9_27	GCA_003349825_1_9_27	+	178907	.	Uniprot:A0A0B4ZXN7_9CAUD	major-tail-protein	MSKPQYYSLKGDFFIRKRSDPTAKPFYFGNAAAATFSMTRETVTLRSSGNESGDLAVEEVSKSATLSITGNNLEARNLAMYLYGTVQAQAEATAQTFTLPALKDGEMFKLPHVNVSDVEIEDLTEGEDFKVLAAGGVVVALKDIAASAAGTYDAGEAQALGVFTTDGDEYEVTYVSERTGKTIVIHRWKPNPASAFELISNEFAAPVLEGPVLLDETLPEGPLGRFAVVYDSK*	hallmark_hmm	common_virus	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0027	shell	direct	high	701	0.999	GCA_003349825.1_02807
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	24752	25123	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	24753	25124	GCA_003349825_1_9_28	GCA_003349825_1_9_28	+	178907	.	PFAM:PF10109.8	tail-assembly-chaperone	MTSKLLPLTATVEVGGESITVREFGFGQIPTVAKHLAAVFSNASIGPSGEINLPQLIAQGGEDVMAILALAAGKPRSWLDTLSVDEGVGLLSAVIAVNKESFAKKLMPALSKLGAAAAGSESN*	phrogs_hmm	hypothetical_protein	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0028	shell	direct	high	371	0.997	GCA_003349825.1_02808
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	25419	28451	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	25420	28452	GCA_003349825_1_9_29	GCA_003349825_1_9_29	+	178907	.	PFAM:PF05939.12	tail-length-tape-measure-protein	MADKASLTVTVDTAQAQQAIKQLLDGFNSLSAVKPAAAGSGPDFGGMAQGIRGATTAAGALVAVLAAVSAAAAAAGAALKKGFEVNAGVETATLGIKSLIASLTEVRDAAGTLATGPEKLAIAGQLAEKQMQKLRLLGLQTSATFEQLSAAYTQAIGAGSSAGLTLDESMELMLRITQAAAALGVPMEQLNQEVRSIISAQITADSTVGKALEASGVTSENLKAWREAGTLAEELGKRLETFREMSPETSATWTATLSNLSEGFDAVLGKMTKGAFEGVKKSLQSALDGIFDGDSLDLAHEFKGIESMAATAFDALGKALSSAISGVLDLVKEFSAWLSENRSTVEAIATAVGNVVKLVLDLAGVVAKLVAGAGDLLVKSGFIEAAMDAISIVVAAIYDTFTRLRIAVGEVGVALADWLVEPLQEALRLLSRFMREIPGIGHSVNQVVLDAANALPDPEKLRKDLEALKSAPRALDEFFKAREKRRAPDTSYADAYDPEQAGRDFMAGVSVGTSTPLKAPAKETKDKPADDARRARKALQDLLRAETEAAVKRAQAVREIESQALDARLEQHLITYRAYLDDKAKLEKSSLDDEMSAQRQHLAQLRAELAHETDDTGVKRLQADIAKAEAELFALSQKSVLIDAKLKLDVWKFERDVADLRVDIRANILDAKGQTLEAALLRLGKETERLLQDRRVAGNAELEALVREQAALSANRLRFDDVSKQAGLVQSSLTAQEDSINREVEAGLRTQLDGERAIRDARLASAAALEESVRAAKELAIASGDPALIAQAIELEQRYRELAGTLDSVAVSINESFFGSIKQGFQDLISGAKSFGDVLKSVISSVLSKLSELALSQLVGNLMSGFGGSGGGLGGLLSAGLSMFGFAEGGAVRGPGTGTSDSILARLSNGEYVLRASAVRALGLDRLNFMNTYGKLPAFATGGLVGGGQGLAGALTTQASAVNANIEVSPTVTIAAGQVADALAKESAFQRAVIAIVGDNGKRIRGAWGT*	phrogs_hmm	hypothetical_protein	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0029	shell	direct	high	3032	1.0	GCA_003349825.1_02809
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	28606	29154	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	28607	29155	GCA_003349825_1_9_30	GCA_003349825_1_9_30	+	178907	.	.	hypothetical protein	MEKTVQSVYYAFDASALTLPLVERHAAYARDALSNTFKLSTDSVKIAPRKRASPEQPFQLTCYVGRSETDVSAMAVAAKAVLPHYREMCQLARQTCQAVEGWRLGKDEERDRRVLEGVVSGQVVGLQPAQRAALVSTTAERLHIKPEDAPLITGTMTDEQLAGALLWLMKHRPRTRQVLLRA*	.	hypothetical_protein	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0030	shell	direct	high	548	0.998	GCA_003349825.1_02810
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	29194	30042	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	29195	30043	GCA_003349825_1_9_31	GCA_003349825_1_9_31	+	178907	.	PFAM:PF02011.14	tail-assembly-protein	MTTPLLTLLPDGSRPRTETLEFLTDVSIALNGTERRVPLRAFPRRTYTSQFTFLDDQARAQRDVLRYADRVVFPLAMHQLPAEATAADAGVGAGSVYLSRRKNGTYVLVSAPRYEWPLSAAIYPCTEGRIAPSRTITHHSAGVSSAVMSFTVEDLDEAIAPWGGEVALDGKPVWPVRADWSTEASERVDDFFDSADFGHRTLREVRYSKRVISVSLLLIGRPAILDFRRLVFTLRGRCKPFRYTFEPDGFERVWRLNTDSVSIDYLRPSLARVELEFLEIEE*	phrogs_hmm	hypothetical_protein	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0031	shell	direct	high	848	0.999	GCA_003349825.1_02811
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	30039	31040	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	30040	31041	GCA_003349825_1_9_32	GCA_003349825_1_9_32	+	178907	.	PFAM:PF05100.11	Minor-tail-protein	MKYLYIVDVLPVDALLSNVLADVASYEEQRRVYLMTNFERPIRFDAPRDYWSSFLSAPQSGTVEGTDHQFDPVPGISHSGVQLNEEQSSGDLSLTLPIDHPVAQLFAYEAPAAQVWLTVLALDDADPAPVVQWTGRVHSAEYSAPTATLKCSHLSTVLRRPGLTRKHPRSCGHTLYSPPPGCGVNRHAIAGSYFAFREDGFLAEVLNGGLTLRVPEAANRGNGFFNEGFIAIDPDYKLLWVHQPRAGTFIGTAPARYAGLLGGYRRHITSHTGQLLHISAPLLTPVEPGTKVTVFAGCNLTASTCKSKFNNFANFGGYPYIPIKNVFESGLKG*	hallmark_hmm	common_virus	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0032	shell	direct	high	1001	0.999	GCA_003349825.1_02812
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	31049	33760	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	31050	33761	GCA_003349825_1_9_33	GCA_003349825_1_9_33	+	178907	.	PFAM:PF13550.5	Putative-phage-tail-protein	MLSFVVFLIANIALQLLAPKPDIPKPKRYGLNEFSLPTATEDRSLPMIFGTVPVAGNLIWVGDYYANEVSEEVSTGWFSSAERTLGYKYHIGMWLTLANCPCDSVQGVLWGDRTAWKGTLTLSRTTTTDLMLNYSYAASEGQEIEDGIAGVLRFYNQSRNDYQTGNPAPLPNPYVAGQLGVSEVPSYPDICHVVLLGPSSGYLDGGPGGGLLNKFYERTHKRSGFVGSSPHIPALQVILKRLPDVKTILHTFHGNLFNSASRGYAYPLTGPFDGSGTLESYINSFIDSVADIGGDANPAFVIAELLCARSQYVGPRLSPFALDWGSFMRAAEKLKSEGMGVSFAWEKSRSVGDVISDVCKQINATLHIHERLGVLSLRLIRESDESVYTFDSSNIVNFASATRTTTNEAPNEIQVPYSDRAMQFDTRRAVAKNTALVQQVGTVISREEEFIGVSNSRVASLLATRTLRSLAASLMQVRFTATVPAGTILKPGDVVTVAHERLGQALRMRITTARWNDYNNRQQVEFEAIEDVFRDGSIEYEDTPEVPAEPAPSVTEPVTSPVLVAAPYALSLDEYERPLYYAEATSPAARQYRLSVAQGVSVWAYERATYASEYAAPAVSGTLDAVLSSYLTGTSAKLNLTNGARDALLALGLRGEVLAIVDGEWLAASGFSLSGNLLTISTLKRGLFDTVPQRHEAGTKVTLLLGYAVGQVRMQTRLSTSGPTLPGVTSVAVRADTRGPGGTVWAFDEAAGDTEATLAAQTYNPSRCVLPLPPAYVTISSRFGCTSPLDNTLEISRSTSALLAWRNRNRLSALRESAFSAMNDPEPSAYVEYVVDWETTGGSGVFTSNSFVSAAAGASQATINTSTIPTGARLVRVSVRSARPSGSGTVRSATYQYFWRLTS*	hallmark_hmm	common_virus	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0033	shell	direct	high	2711	1.0	GCA_003349825.1_02813
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	33806	34258	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	33807	34259	GCA_003349825_1_9_34	GCA_003349825_1_9_34	+	178907	.	cd14845	L-Ala-D-Glu peptidase, also known as L-alanyl-D-glutamate endopeptidase. This L-Ala-D-Glu peptidase family includes L-alanyl-D-glutamate peptidase (bacteriophage T5) (also known as L-alanoyl-D-glutamate endopeptidase), and Ply118 and Ply500 L-Ala-D-Glu peptidase. Bacteriophage endolysin degrades the peptidoglycan of the bacterial host from within, leading to cell lysis and release of progeny virions. The bacteriophage endolysin Ply118 cleaves between L-Ala and D-Glu residues of Listeria cell wall peptidoglycan. This family belongs to the MEROPS peptidase M15 subfamily C.	MLLLNSRKIEHLHPDLQPLCRLLLERCAAAGYDVFLTQTFRSTEYQNMLYAQGRTQAQLNAAGLGHVMAEPSKPRVTNARGGSSEHNATLNGIPASRAFDIAFMRDGKASWADSEPWDKVGAIGRSLGLEWGGDWKTFKDRPHFQLPKSR*	mmseqs_cdd	nonviral_gene	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0034	shell	direct	high	452	0.998	GCA_003349825.1_02814
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	34477	34824	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	34478	34825	GCA_003349825_1_9_35	GCA_003349825_1_9_35	+	178907	.	.	hypothetical protein	MTEHNQAHTAVKTHRGMPGIRVCVFKPGGGKLTTIYVNNVRLADLLEVADGDIGAVTHAARYASLRCTKEAGAPWSHTVMKDARKLLLAARARREAHALAAAAAENNAAWEQALH*	.	hypothetical_protein	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0035	.	unmatched_CDS	none	0	0	.
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	35409	36440	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	35410	36441	GCA_003349825_1_9_36	GCA_003349825_1_9_36	-	178907	.	COG1420	Transcriptional regulator of heat shock response [Transcription]. 	MLDPRLDERSRLLLKALVERYIADGQPVGSRTLSKASGLELSPATIRNVMADLEELGLIASPHTSAGRVPTPRGYRLFVDTMLTVRPLDVEAAPPAVASQLQPDQPKRVIANAAQMLSSLSRFVGVVTTPRKPSVFRHIEFLRLSDRRVLVILVAPDGDVQNRVIFTERDYTDSQLVEATNFLNTHYAGLTIEEVRARLKDEIDALRSEIATLMQAAVQAGTEVMAEDSEQVVVSGERNLLQVQDFSSDLDSLRKLFDLFEQKTQLMRLLDVSSRAEGVRIYIGGESQVVPYEELSVVSAPYEVNGQIVGTLGVIGPTRMAYDRMIQIVDITARLVSNALSQK*	mmseqs_cdd	nonviral_gene	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0036	persistent	direct	moderate	993	0.962	GCA_003349825.1_02816
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	36569	37453	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	36570	37454	GCA_003349825_1_9_37	GCA_003349825_1_9_37	+	178907	.	PRK02155	NAD kinase. 	MQSSRFRHVALIGKYQAQGIEPVLEDIAQFILRQGAEVTLEHDTALNTGLATRYPTLDVDGIGAACDLAVVVGGDGTMLHIARELARYNVPLIGINQGRLGFITDIPVHEVHASLGPMLHGDFEEEHRTMLEGQVVRDGEVIYDGFAMNDVVVSRGATASMVELRVDVDRQFMANLRADGLIIASPTGSTAYALSSGGPILHPAIKGWVLTPIAPHTLSHRPIVLPDASEVTVEIVAGRDASANFDMQSLASLLHGDRIRVQRSAHQVRFLHPRGWSYYATLRRKLHWNEGVGA*	mmseqs_cdd	nonviral_gene	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0037	persistent	direct	high	884	0.999	GCA_003349825.1_02817
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	CDS	37453	39147	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	37454	39148	GCA_003349825_1_9_38	GCA_003349825_1_9_38	+	178907	.	PDB:4UX3_A	Chromosome-Mainenance-protein	MLRRIALRDFVIVSELDVEFEAGFSVLTGETGAGKSILIDALQLALGSRGDAGVVREGAQRTEITAVFDTPPALHPWLDEAGFEIADELLLRRTIDAQGKSRAWINGSPATVAQLRAAGEALVDIHGQHAWQSLTRADAVRGLLDAYAGTDLKPLAAAWQAWREAQQLLDDARTRQADLERERERLAWQIGEVDKLAPGADEWDELNAEHRRLAHAQSLIDAVQAALDAVSEADQSADALTGRAVEQLQDVAGYDASLASVIEVLQSAQAQLQDASHSLHGYLRHVELDPERLQELDERLSTWMSLARRYRRPPEELPALLEGWKDELRRLDAATDLEALERAAAEARQRYDEAARKVSQARRQAAPKLAATVTQAMQSLGMAGGRFEVALVKLDAPQSFGLEAVEFLVAGHEGSTPRPLAKVASGGELSRIALAIAVTTSRLGEAGTLIFDEVDSGVGGAVAETVGRLMKQLGVDRQVLAVTHLPQVAACADHHYVVSKATRAGVTTSEVRPVAGEQRVAEIARMLGGQQLSGTSFAHAQEMLETAAAPVAAAPTPSRGRRRP*	common_virus_hmm	common_virus	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_CDS_0038	persistent	direct	high	1694	0.999	GCA_003349825.1_02818
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	tRNA	324434	324509	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	806	881	tRNA-Lys	tRNA-Lys	+	463944	.	tRNAscan-SE score: 80.2	Lys	NA	tRNAscan-SE	.	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote	cenote	tRNA	367457	367532	GCA_003349825.1	QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825.1_QQAP01000002.1	GCA_003349825.1|QQAP01000002.1	GCA_003349825_1_2	GCA_003349825_1_2@C7	43829	43904	tRNA-Lys	tRNA-Lys	+	463944	.	tRNAscan-SE score: 87.5	Lys	NA	tRNAscan-SE	.	C7	44836	323629	368465	GCA_003349825.1|QQAP01000002.1@region_323630_368465@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	tRNA	22216	22295	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	22217	22296	tRNA-Met	tRNA-Met	+	178907	.	tRNAscan-SE score: 67.6	Met	NA	tRNAscan-SE	.	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote	cenote	tRNA	35096	35180	GCA_003349825.1	QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825.1_QQAP01000009.1	GCA_003349825.1|QQAP01000009.1	GCA_003349825_1_9	GCA_003349825_1_9@C0	35097	35181	tRNA-Met	tRNA-Met	-	178907	.	tRNAscan-SE score: 60.6	Met	NA	tRNAscan-SE	.	C0	39148	0	39148	GCA_003349825.1|QQAP01000009.1@region_1_39148@tool_cenote_tRNA_0002	.	.	.	.	.	.