core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	142473	143549	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	1	1077	GCA_003351445_1_1_118	GCA_003351445_1_1_118	+	1860196	.	TIGR01392	homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. [Amino acid biosynthesis, Aspartate family]	MSVQNVVLFDTQPLTLMLGGKLSHINVAYQTYGTLNAEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAGN*	mmseqs_cdd	nonviral_gene	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0001	persistent	direct	high	1076	0.999	GCA_003351445.1_00122
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	143604	146246	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	1132	3774	GCA_003351445_1_1_119	GCA_003351445_1_1_119	-	1860196	.	PDB:4FM9_A	DNA-topoisomerase-2-alpha	MTDSIQSSITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLNGCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATVETNEKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAVGEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIESFVLHRREVVTRRSIFELRKARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATAISSRSWTLHSDIINLLDVSARPDELEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVIKEYEELLVKIADLLHILSSAERLMEVIREELEEVKAQFGDDRLTEITAASGDIDLEDLIAQEDVVVTLSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWLKVYQLPQASRGARGRPIVNILPLQENERITAILPVSAYEEDKFVVMATAGGIVKKIALTEFSRPRSNGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAENAVRAMGRLATGVRGIKLALTNDISDDESAVEIEDISDDNAEASLDLNIDKVVSLVVPKGEGEILTATQNGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRVSEVSIVGRNTQGVRLIRTADDEHVVSLERVCDADEEDSLEESSSEE*	common_virus_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0002	persistent	direct	high	2642	1.0	GCA_003351445.1_00123
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	146413	148176	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	3941	5704	GCA_003351445_1_1_120	GCA_003351445_1_1_120	-	1860196	.	4Q84_A	Ribosomal protein S12 methylthiotransferase accessory	MTEQTFILGKDAALEDSIAKFQQKLTALGFNIEEASWLNPVPNVWSVHIRDKDCPQCFSNGKGASKKAALASALGEYFERLSTNYFFADFYLGQEIANGDFVHYPNEKWFPIEDDALLPNGILDDYLLDYFDPNAELTPELLIDLQSGNYDRGIVAMPYVRQSDEQTVYIPQSIIANLYVSNGMSAGNTKFEARVQGLSEVFERYVKNKIIAEAISLPEIPKSVMDRYPSIQASIAKLEEEGFLIYAFDASLGGKYPVICVVLLNPNNGTCFASFGAHPNFQVALERTVTELLQGRSLKDLDVFSPPSFNNDDVAEHANLETHFIDSSGLISWDLLKKTPDYEFADWDFSGTTQEEYNNLMAIFRADEKEVYVMDYNHLDVYACRIIVPGMSDIYPADDLIYANNNMGMDWREILLDLPNWHHDAETYQELLDELDGQDIDDATRVREFIGIVAPKNSGWTTLRVGELKSMLHLALGELEQALDWANWTLNMNSSVFTTEPVNYYRALISIIELHLDQNREPAQYRAVFEKMYGKDAVKQAWAAVSEGGNPFYNLPASDENLENFKEHQALLGAYGKLQKAKRAHQK*	hhsuite_tools	nonviral_gene	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0003	persistent	direct	high	1763	0.999	GCA_003351445.1_00124
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	148313	148789	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	5841	6317	GCA_003351445_1_1_121	GCA_003351445_1_1_121	-	1860196	.	.	hypothetical protein	MKFEVIYKFFLVWGLALSLLFVVASGISMWLGFPFSQALDIHLFFAGFTVFGLLLHFYSRKKKWVKINTQFADLITNNRMPSYCNLDRLMMTFEHFSIQQIAEQLNLSLPILLNELSQAQINITDSHRTLCENFPLNDEKIFAAITIALKVRFNPTLL*	.	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0004	shell	direct	high	476	0.998	GCA_003351445.1_00125
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	149025	149831	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	6553	7359	GCA_003351445_1_1_122	GCA_003351445_1_1_122	+	1860196	.	COG4976	Predicted methyltransferase, contains TPR repeat [General function prediction only]. 	MTIYDINFAELYQQHLIACHHYNLPPIKWDKKAVKMAENLVGKPSAYNQQLLQAMNVQTDETVLDIGCGPGTFAVPLAQQGSTVYALDYSNGMLDCLAQFKQKFGLHHLTTFHKSWADNWDDVPQADVVLASRSTLVDDLDDMIEKLCSKAKKRVFLTSVTQRHFLDEGVFEAIGREDIGFPTYIYLLNRLYQKGIQANLNFIETESGCFQGESYEDLLASVEFSLGELSEKEKQGLKAFYDRKQANNEPISHGQKKWALIWWNVDRI*	mmseqs_cdd	nonviral_gene	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0005	shell	direct	high	806	0.999	GCA_003351445.1_00126
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	149883	150584	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	7411	8112	GCA_003351445_1_1_123	GCA_003351445_1_1_123	+	1860196	.	TIGR03413	hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753). [Cellular processes, Detoxification]	MLFALPALNDNYIWLYQRENLPLIIVDLPETDKLFAWLEKQNATIEAVLLTHEHDDHTQGVSAFKKRYPTVPIYGPQECEKKGATQIVNEGKILTANYQIDVIPTGGHTKQHVSFLVDNHLFCGDALFSAGCGRVFTGNYAQMFEGLQRLNTLPDETIVCPAHEYTLGNLAFAETVLVEKSAVEKQRIFVETQRAENKPSLPTTLKLEREINPFLQAKTLEEFTALRKAKDIF*	mmseqs_cdd	nonviral_gene	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0006	persistent	direct	high	701	0.999	GCA_003351445.1_00127
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	150628	151488	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	8156	9016	GCA_003351445_1_1_124	GCA_003351445_1_1_124	-	1860196	.	PDB:2VDW_C	Capping-Enzyme-D1	MKNELICYKQMPVWTKDNLPQMFQEKHNTKVGTWGKLTVLKGKLKFYELTENGDVIAEHIFTPESEIPFVEPQAWHRVEALSDDLECTLGFYCKKEDYFSKKYNMTAIHGDVVDAAKIISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDFIVSTVVFMFLNRERVPSIIKNMQEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKDWEFLEYNENMGELHKTDENGNRIKMKFATMLARKK*	common_virus_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0007	persistent	direct	high	860	0.999	GCA_003351445.1_00128
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	151601	153649	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	9129	11177	GCA_003351445_1_1_125	GCA_003351445_1_1_125	-	1860196	.	PRK00133	methionyl-tRNA synthetase; Reviewed	MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKLGITPEELIAKAKADHIRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPIVKESEHFFFDLPAFEGMLKEWTRSGSLQSEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIVYFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAKLNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLADKLEDEALFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCSMGIELFRVLMSYLKPVLPKLAERAETFLQAELRWDNIHQPLLGHTLAPFKALFSRLEKKQIDAVVEETKALFAAANKAAEKTEAKPTALSTVEPIAETITIDDFAKLDMRVAKVLKCEAVPESNKLLRFELDLGDHTRQVFSGIKAAYNKPEELEGRFVIMVANLAPRKMKFGVSEGMILSAGTGGSDLFLLSADSGVTAGMQVK*	mmseqs_cdd	nonviral_gene	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0008	persistent	direct	high	2048	1.0	GCA_003351445.1_00129
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	153800	154912	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	11328	12440	GCA_003351445_1_1_126	GCA_003351445_1_1_126	+	1860196	.	PDB:3EZ9_B	ParA;-dna-binding,-winged-hth-protein	MATYFSDNLTADQQNQVQQIIQQFQHPTLQKDLIVLNTLKKVEKGGDTLRIELKLPFAWNSGAEQLKQAVSDALLKATDCKLIKWAVAYQIATLKRANNQPAVKGVKNIIAVSSGKGGVGKSSVSVNLALALQAQGARVGILDADIYGPSIPHMLGAADQRPTSPDNQHITPIKAHGLSANSIGFLMNEDSATIWRGPMASSALSQLLNETLWDSLDYLIIDMPPGTGDIQLTLSQQIPVTGAVVVTTPQDIALLDAVKGISMFERVSVPVLGVVENMSMHICSKCGHHEAIFGTGGAEKMAEKYNVKVLAQLPLHIRIREDLDAGNPTVVRVPENEISQAFLQLAEKVSTELYWQGSVIPSEILFKEVK*	common_virus_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0009	persistent	direct	high	1112	0.999	GCA_003351445.1_00130
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	154959	155621	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	12487	13149	GCA_003351445_1_1_127	GCA_003351445_1_1_127	-	1860196	.	cd02149	nitroreductase similar to Escherichia coli NfsB. NAD(P)H:FMN oxidoreductase family. This domain catalyzes the reduction of flavin, nitrocompound, quinones and azo compounds using NADH or NADPH as an electron donor. The enzyme is a homodimer, and each monomer binds a FMN as co-factor. This family includes FRase I in Vibrio fischeri, wihich reduces FMN into FMNH2 as part of the bioluminescent reaction. The family also includes oxygen-insensitive nitroreductases that use NADH or NADPH as an electron donor in the ping pong bi bi mechanism. This type of nitroreductase can be used in cancer chemotherapy to activate a range of prodrugs.	MTQLTREQVLELFHQRSSTRYYDPTKKISDEDFECILECGRLSPSSVGSEPWKFLVIQNKTLREKMKPFSWGMINQLDNCSHLVVILAKKNARYDSPFFVDVMARKGLNAEQQQAALAKYKTLQEEDMKLLESDRTLFDWCSKQTYIALANMLTGASALGIDSCPIEGFHYDKMNECLAEEGLFDPQEYAVSVAATFGYRSRDIAKKSRKTLDEVVRWVG*	mmseqs_cdd	nonviral_gene	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0010	persistent	direct	high	662	0.998	GCA_003351445.1_00131
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	155735	156409	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	13263	13937	GCA_003351445_1_1_128	GCA_003351445_1_1_128	+	1860196	.	COG1083	CMP-N-acetylneuraminic acid synthetase  [Cell wall/membrane/envelope biogenesis]. 	MTRIAIIPARAGSKGIKDKNLQLVGGVSLVGRAILAAQESGMFDQIVVTSDGENILKEATKYGAKPVARPESLAQSDTRTIDAILHCLETLNISQGTAVLLQPTSPLRNALDIRNAMEIFLGGKYKSVVSACECEHHPYKSFTLEGTEVQPIHELTDFEAPRQKLPKSYRANGAIYINDIESLFEEKRFFIAPMRFYLMPTYRSIDIDSTLDLQLAESLISKEF*	mmseqs_cdd	nonviral_gene	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0011	persistent	direct	high	674	0.999	GCA_003351445.1_00132
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	156303	156596	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	13831	14124	GCA_003351445_1_1_129	GCA_003351445_1_1_129	-	1860196	.	.	hypothetical protein	MSQCSAGKLKMPAGKSTIFTILKIKLDDLLLEKKLYLVIKNLHLSWLFNPTFGVQIKSAANFFRILLKLNFRLIANQVWSQYQWNDKLALNKNALAQ*	.	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0012	persistent	ambiguous	low	108	0.367	GCA_003351445.1_00132
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	157118	158128	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	14646	15656	GCA_003351445_1_1_130	GCA_003351445_1_1_130	-	1860196	.	CDD:PHA02536	portal-vertex-protein	MSKKTKKSTALSTGNQAQAFSFGEPIPVIDRAEVLNYFESVVMYEKYYNPPINLSYLAKALNASAHHNSAITVKKNILLSTCKTTALLPRTQLEKLVQDYLVFGNAYVEKTVNSFGKVVSLKSSLAKYMRVGVETGVFYQIVNGFDEYEFKKGSVFNLINPDVNQEIYGVPEYLAALQSAFLNESATLFRCKYYLNGAHAGSIIYMTDPTQNKDDIEAIKTQIRQTKGTGNFKNLFVYIPNGKKDGMQVIPLSDAIAKDDFLNIKNASRDDVLAAHRVPPQLMGIVPNNTGGFGDVEKATRVFFINEIIPLQERLKEINSWIGEEVITFSDYKLLN*	hallmark_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0013	shell	direct	high	1010	0.999	GCA_003351445.1_00133
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	158138	159919	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	15666	17447	GCA_003351445_1_1_131	GCA_003351445_1_1_131	-	1860196	.	CDD:PHA02535	terminase-ATPase-subunit	MDEQVINQPSPEVTVEIKRKAQQMYFSGYKIAEISRQLNTPASTIASWKDREKWDDIAPVGRVELALETRLNLLIAKEEKSGSDYKEIDLLGRQMERMARVKKYSFGDGNEVDLNPKLANRNKGERKKAEPNAIDQEQEELLINGFLDGMFNYQRIWHKAKEHRIRNILKSRQIGATYYFAHEAFIDALTTGHNQIFLSASKKQALQFRSYIVNYAKQTADVDLKGETIKLPNGAELIFLGTNSATAQSYHGNLYFDEVFWVPKFDVMRKVASGMAAQKMYRQTYFSTPTTIAHPAYAFFSGKAFNRNRAKSEKIEIDISHENLKSGKLCADRQWKQIVSIYDAMEGGCNLFNIDDLIAENSKEEFEQLFLCQFADDNSSAFKFSDLQLCQVDSLEEWHDYKPFYQRPFGNREVWLGYDPAFTGDRAALVIVAPPKVEGGDYRVLHKQTFHGMDYETQASRIKQFCDDYNVTRIVIDKTGMGSGVYQEVRKFYPMAQGLEYNADLKNEMVLKTQNLIQKRRLKFDSGDNDIVSSFMTVKKRITGTGKITYVSDRSEDASHGDLSWAIMNCILNVPYGLGGDVSSNKSTIFTFE*	hallmark_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0014	shell	direct	high	1781	0.999	GCA_003351445.1_00134
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	160084	160899	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	17612	18427	GCA_003351445_1_1_132	GCA_003351445_1_1_132	+	1860196	.	CDD:pfam05929	capsid-scaffolding-protein-serine-peptidase	MAKKSKWVVVATEGATTDGRTIQRNWISEMAANYDPKKYGARVNLEHIKWRYMWNDDPHSKCYGDVIGLKTEENAEGKLQLLAQIDPTDDLIKLNKDRQKIYTSIECDPNFADTGEAYLVGLAVTDNPASLGTEMLVFSAGASANPLNNRKEKADNIFTAAVETELEFVEETQSIFEKIKGLFAKKEKSDDERFSDQTQAIELLAEQTKETLEKLTALSDDLAKQKAEIEEMKASNAEIQATFSELQKPVEPENPRPLVYGEQPETDGRFF*	hallmark_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0015	shell	direct	high	815	0.999	GCA_003351445.1_00135
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	160920	161969	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	18448	19497	GCA_003351445_1_1_133	GCA_003351445_1_1_133	+	1860196	.	PFAM:PF05125.11	Major-Capsid-protein	MNKFTKQKFNTYLAGVAQDNGEDVAFIANGGQFTVEPTIQQKLENAVLESSDFLKRINVVMVQEMKGSALRLGVLSPVASRTDTNTKARETTDIHSLQENTYSCEQTNFDTHLNYPTLDSWAKFPDFAARVGKLKAERIALDRIMIGWNGTSAATTTNRTSNPLLQDVNKGWLVQIEDKAKARVLKEIEESSGKIEIGAGKTYKNLDALVFALKEDFIPAQYRDDTKLVAIMGSDLLADKYFPLINQEKPSEILAGDTVISQKRVGGLQAVSVPFFPKGTVLVTSLDNLSIYVQEGKVRRHLKDVPERNRVEDYLSSNEAYVVENYEAVAMAKNITILEAPTPISPVAA*	hallmark_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0016	shell	direct	high	1049	0.999	GCA_003351445.1_00136
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	161981	162631	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	19509	20159	GCA_003351445_1_1_134	GCA_003351445_1_1_134	+	1860196	.	PFAM:PF05944.11	small-terminase	MRPTKRHFLEVSAAIANAAETEDLSDFTEYEKMCRILARHRKDLKNIQSTERKGAFKKQILPDYLPWIEGALSVGSGKQDNVLMTWCVWAIDCGEYHLALQIADYAVFHDLRLPEPFTRTLGTLLAEEFADQAKAAQAANKPFEVAYLEQVQRITADCDMPDESRARLLRELGLLLVEKHPEQALAYLERALGLDQKIGVKGDIKKLKKQLSATEC*	hallmark_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0017	shell	direct	high	650	0.998	GCA_003351445.1_00137
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	162925	163431	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	20453	20959	GCA_003351445_1_1_135	GCA_003351445_1_1_135	+	1860196	.	PFAM:PF05926.10	head-completion-protein	MSDGAISVKLAPDYEMGEVPQQLNDYDTSDDIISNDGFFPDMSLSQFRNQYRADGTITTQRLQDALIEGMASVNAELSTFKTQSKRDSLEQIIAPSINGESVLIYRYKRAVSCLALANLYERYASYDSTNDGEKKMAQLKDSIDELRRDARFAISDILGRKRVDAELI*	hallmark_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0018	shell	direct	high	506	0.998	GCA_003351445.1_00138
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	163431	163640	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	20959	21168	GCA_003351445_1_1_136	GCA_003351445_1_1_136	+	1860196	.	COG5004	P2-like prophage tail protein X  [Mobilome: prophages, transposons]. 	MQVYAQQNDNLDAILYRHFGRSEGLLEITCELNPHLMDKPIIPIGTPVILPDADTEKISVANDTIQLWS*	mmseqs_cdd	nonviral_gene	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0019	shell	direct	high	209	0.995	GCA_003351445.1_00139
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	163642	163863	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	21170	21391	GCA_003351445_1_1_137	GCA_003351445_1_1_137	+	1860196	.	pfam16080	Bacteriophage holin family HP1. Phage_holin_2_3 is a family of small hydrophobic phage proteins called holins with one transmembrane domain. Holins are produced by double-stranded DNA bacteriophages that use an endolysin-holin strategy to achieve lysis of their hosts. The endolysins are peptidoglycan-degrading enzymes that are usually accumulated in the cytosol until access to the cell wall substrate is provided by the holin membrane lesion.	MHDAPSKASYTSGIFAFLIGRIADMFSNVNWADVASITGIVIGVATFLVNWYYKKKDFELKEKELKQRIHHHD*	mmseqs_cdd	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0020	shell	direct	high	221	0.995	GCA_003351445.1_00140
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	163856	164374	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	21384	21902	GCA_003351445_1_1_138	GCA_003351445_1_1_138	+	1860196	.	CDD:cd16901	P1-lysozyme	MIKRSAKYICAISAVVGLVIASHGNEIRTSEKVLLLIGNAEGCMKKPYQCPADVLTVGIGITDAVEKIDRNKIYTLQEIAELYVKGIKQSEKCVNQYANGKTMPQGAFDALVSITFNVGCGKLKNSSLFKMARQGYSKAMCGQFERWIYAAGKPLKGLIERRQKEKNLCLIS*	common_virus_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0021	shell	direct	high	518	0.998	GCA_003351445.1_00141
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	164359	164709	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	21887	22237	GCA_003351445_1_1_139	GCA_003351445_1_1_139	+	1860196	.	PFAM:PF10828.7	Rz-like-spanin	MFNFLTAKERGIFLIGPILLVLLIVFLGFKANYWRKEMLKEEQLKLKWQNAYIELNHSVQNFAEQQAQLIQAVNNLKANQNQQTQDLKNVLKSNQDWANRPLPDDVKRVLNSAGSH*	phrogs_hmm	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0022	shell	direct	high	350	0.997	GCA_003351445.1_00142
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	164884	165099	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	22412	22627	GCA_003351445_1_1_140	GCA_003351445_1_1_140	+	1860196	.	PHA00080	DksA-like zinc finger domain containing protein	MTDQFDRAQQLEEMQREIALKKHRTFKAVSRLYCEDCDAPIPEKRRQMIQGVTRCVTCQQRFEIQQRNFRK*	mmseqs_cdd	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0023	shell	direct	high	215	0.995	GCA_003351445.1_00143
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	165096	165218	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	22624	22746	GCA_003351445_1_1_141	GCA_003351445_1_1_141	+	1860196	.	.	hypothetical protein	MRRTTLFLAIAAALPCLANTYTVPFRDGPFVNIQIILTEE*	.	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0024	shell	direct	high	122	0.992	GCA_003351445.1_00144
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	165251	165358	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	22779	22886	GCA_003351445_1_1_142	GCA_003351445_1_1_142	+	1860196	.	.	hypothetical protein	MTDTGHLIVAVDKDNRPLICRDTQNEKAQPTAQNP*	.	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0025	shell	direct	high	107	0.991	GCA_003351445.1_00145
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	165324	165794	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	22852	23322	GCA_003351445_1_1_143	GCA_003351445_1_1_143	+	1860196	.	PFAM:PF06891.10	tail-completion-protein	MKKPNQLRKILEQSHPDFVKNPDHLQLYVDGGQIVATGAASFSFEYRYTLNVVVTDYAGDIATLIVPMMAYLRTNQPEILENPQIRENAFKFQIDYNNNNTADISFEIQLTERVVSKKDGNNVQIHYAKEPVWDEPNRVKVYLENRDSPIFEGDTV*	hallmark_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0026	shell	direct	high	470	0.998	GCA_003351445.1_00146
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	165794	166255	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	23322	23783	GCA_003351445_1_1_144	GCA_003351445_1_1_144	+	1860196	.	PFAM:PF05069.12	Virion-morphogenesis-family	MATVEEVQAKLTALIANLSPQARRQLGRKIGQALRKSQSNRIARQQNPDGSAFEPRKPRKEFGKKKGRIKRKAMFAKLRTARHLKVRSNGNEVSVGFNGSSAAIAAVHQYGLTARPSKEKDFKVRYAQRELLGISEQDLSMLNELVIEQISKS*	hallmark_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0027	shell	direct	high	461	0.998	GCA_003351445.1_00147
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	166256	166603	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	23784	24131	GCA_003351445_1_1_145	GCA_003351445_1_1_145	-	1860196	.	.	hypothetical protein	MKNKRTSRTLIMLNIAMWSLVIISTCLHYQFNPFSFIWFDVIAPVGHFFAVVFSALSSFTVSMYELFKPETFWGWVWFVMFVVPIICLPLYVVLLVLFAGKLSHHDTVVPPSYLK*	.	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0028	shell	direct	high	347	0.997	GCA_003351445.1_00148
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	166707	166889	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	24235	24417	GCA_003351445_1_1_146	GCA_003351445_1_1_146	+	1860196	.	CDD:pfam05069	virion-morphogenesis-protein	MPLIKCLLQFAVHQYGLTARPSNNKDFKVQYAQRELLGFAEEDIEMIERFVLRAIAGKEF*	hallmark_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0029	shell	ambiguous	low	69	0.377	GCA_003351445.1_00149
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	166900	167211	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	24428	24739	GCA_003351445_1_1_147	GCA_003351445_1_1_147	-	1860196	.	.	hypothetical protein	MEIFVLLIGLPIIVGLLIAFGTAVLAAFSYIFVGALSLAINFWYITLAVMLVLLAPLIYLNSWLFWILAALVIFFTVAWFFGGDTEQIKAEIERKRIAKEHKL*	.	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0030	shell	direct	high	311	0.997	GCA_003351445.1_00150
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	167314	167487	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	24842	25015	GCA_003351445_1_1_148	GCA_003351445_1_1_148	+	1860196	.	CDD:pfam05069	virion-morphogenesis-protein	MPLIKYLLQFAVHQYGLTARPSNNKDFKVQYAQRELLGFSNSDLEMIEDLIIEKLSL*	hallmark_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0031	shell	direct	high	173	0.994	GCA_003351445.1_00151
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	167465	167725	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	24993	25253	GCA_003351445_1_1_149	GCA_003351445_1_1_149	-	1860196	.	.	hypothetical protein	MIAILSLFILSVGLLGLAIGFGVIAVPWFVSLVIAAPAIFIYMLMIGSVLWLVEVNFFLGMAALVVYAYWIHIIRKHLKSKGLISQ*	.	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0032	shell	direct	high	260	0.996	GCA_003351445.1_00152
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	167794	168561	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	25322	26089	GCA_003351445_1_1_150	GCA_003351445_1_1_150	+	1860196	.	Uniprot:A0A0A8U8Z7_ECOLX	tail-tape-measure-protein-	MNNLQLTVLLNAIDKISAPVRSASKSVHELSAKLKESKSIHRQLNQQNKQHQAAMKQYASAINPLKSKLDSLNQELEQAKQKAASYAQYMKNAQHPTAGFQKEVEKAKSAVKKLKQEQIDAANKLQQARQELAKSGISAEKLAQKQRELQKNTKSATDQIKNQEAALKKLNAKQAAYNQYRGQVEKLKDISGKAQIIGAQATAAGTTMTAPIVNSIRDFMSFEDVMAGVARQVPGLKDKFGQFTPKYDEWKNKIK*	hallmark_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0033	shell	direct	high	767	0.999	GCA_003351445.1_00153
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	168604	170568	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	26132	28096	GCA_003351445_1_1_151	GCA_003351445_1_1_151	+	1860196	.	PFAM:PF10145.8	minor-tail-protein	MVTAAARMDIQENELEDFIRLNTQMATAFDAENPDELVELFGKVQKNFKLTTKDAKELADTINYLDDNAISKGTDIINFLNNTSGIGNLVKISEKNLAALGSTLLTAGNEASTSAKAIESTFNRLSKATRMKPVNNGLKALGLDPKAIQKAMVKDAQGTLMMIVEKIKKLPKHLQAGVISDIAGGNYNTQLAGLVANTEEWRRQIELANSEEAKNSMAREFQTRMTTLSAKWQLFKNRLFNVNSSVGASLKDSMTSLMDGVGNLLDKIETWIDEHPKLTSTIAKTAVAIGGSLSLLGALSLALSFILYPAARLFLGLSKLNVIIPKFSGHLSSAGRLILRGLLSPLKLIALAISPLGIALLSVAALIYKFWQPIKAFFGGFWEGLKSGLAPVLEKFQPLGTAFGVVVGWIEKAVKWFTDLLSPVQSTKEDLDAAVSAGERFGNGMAKAIEFILTPLTRLMDGIKWISENMPSWEGIKNSVSSAWERTKNTSSNAWQSTKETAGSAWESFKDFTGFGSNGKKLPSQNWSGGYTGNGGKYEPMGIVHGGEYVMTKEATSRLGVNTLNALNYGKRALIAGGLGISVATAAPVQVDTRAPIFARPMMTQTSQPMSVNITINAAQGMDERAIAQQVAKQIQRIENQRQARARSSMWDRA*	hallmark_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0034	shell	direct	high	1964	0.999	GCA_003351445.1_00154
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	170645	170812	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	28173	28340	GCA_003351445_1_1_152	GCA_003351445_1_1_152	+	1860196	.	.	hypothetical protein	MNENAPFIREIIDRTSQIKGERVKGDNAKEIKANVQTILKAQLRATQLNARTQTY*	.	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0035	shell	direct	high	167	0.994	GCA_003351445.1_00155
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	170790	171242	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	28318	28770	GCA_003351445_1_1_153	GCA_003351445_1_1_153	+	1860196	.	.	hypothetical protein	MLERKHIKFVEIHHLFTQISLALGFTEQDIDKHSTNLAELIALWQQQEFVEVYVENKDRLFGRAKDSSLAYGASPYYIGLYHARLSYEENDPLVVLTFNYEDNPEQTTVSVRFMVDHDTLFGTKEEKFIQQRMKDIRKRIDDFIQLGNKK*	.	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0036	shell	direct	high	452	0.998	GCA_003351445.1_00156
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	171340	171897	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	28868	29425	GCA_003351445_1_1_154	GCA_003351445_1_1_154	+	1860196	.	.	hypothetical protein	MTNLSLNPIFESFAPIFKQLKTVAMSALFIAPLAINHPVRHTTHTVNIFSVQTDENKSINQQDIEKIIDMVKAVSAITDFVIASITAESLSYIDLSDVLRLESKINKYDDLANNIMVNNKTPELSTTLQSFSNKMHTLCNMMKSEKYKQQSDEVVLSRLYRKSEDAGYTYKSSHSFDDFKKAVMM*	.	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0037	shell	direct	high	557	0.998	GCA_003351445.1_00157
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	171906	172334	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	29434	29862	GCA_003351445_1_1_155	GCA_003351445_1_1_155	+	1860196	.	.	hypothetical protein	MKIELSKQFQEGRLNTPFFKDIQAMSDEELQLIFDFMQSIKQGKLLRGKNKPSWLDDNLNDIPNTEVYQQNEIWHYHCGPYNKGSRYCPMSGLKINLNGETSGPVIHYQKISDEHIVIIAFSPQHEPFPREWDTPNPIIDRA*	.	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0038	shell	direct	high	428	0.998	GCA_003351445.1_00158
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	172444	173037	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	29972	30565	GCA_003351445_1_1_156	GCA_003351445_1_1_156	+	1860196	.	PDB:3VTO_Q	central-spike-protein	MSAELQRKLDNIIRFGVIAEVNHATARARVKSGDILTDFLPFVTFRAGTTKTWSPPTVGEQCVMLSVSGEFTTACILVGLYTQNSPSQSPDEHVIEFADGAKITYNQSSGALVVTGIKTASITAANQIDIDCPAINIKGNVNIDGSLSTTGTSTTKGNISTQGSVTASGDIKGGSISLQNHVHLEQGDGQRTSNAKA*	hallmark_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0039	shell	direct	high	593	0.998	GCA_003351445.1_00159
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	173006	173377	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	30534	30905	GCA_003351445_1_1_157	GCA_003351445_1_1_157	+	1860196	.	CDD:PHA02516	baseplate-wedge-subunit	MANEPLTQRHSMNRYTGETLKNESDHIKQSIADILLTPVGSRIQRREYGSLIPMLIDRPISHTLLLQLAACAVTAINRWEPRVQITQFKPELVEGGIVASYVARSRKDNQEMHNEKLFLGHKQ*	common_virus_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0040	shell	direct	moderate	338	0.909	GCA_003351445.1_00160
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	173374	174288	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	30902	31816	GCA_003351445_1_1_158	GCA_003351445_1_1_158	+	1860196	.	CDD:PHA02568	baseplate-assembly-protein	MSELVDLSKLDAPKVLEDLDFESLLADRKAEFIALFPQDERAFWQARLSLESEPITKLLQEVVYLQLMERNRINNAAKATMLAYASGSDLDVIAANYNVKRQVIQEANNNVTPKIPEILEDDTSLRLRTQLAFEGLSVAGPRSAYIFHALSAHPDVADVSVVSPQPANVTVTILSRNGQGETNENLLNVVRAKLNDDDIRPIGDRVIVQSAVIQSYEIRAKLHLYRGPEYEPIKAAALKKLTTYTEEKHRLGRDISLSGIYAALHLEGVQRVELISPTADLVLPSSKSAYCTAINLEIVTSDDY*	hallmark_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0041	shell	direct	high	914	0.999	GCA_003351445.1_00161
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	174275	174814	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	31803	32342	GCA_003351445_1_1_159	GCA_003351445_1_1_159	+	1860196	.	PFAM:PF09684.9	Tail-protein	MMITNHLLPIGATPLEKRAAEILKSAVENPIVIADLINPERCPTELLPYLAWAFSVDKWDENWTEEVKRIAIKQSYFVHKHKGTIGAVKRVVEPIGYLIELKEWFQTNPQGTPGTFSLTVEVSESGLNEQTYNELVRLINDVKPVSRHLNQLAIALSPTGSLCAFVGQQWGEIITVYPQ*	hallmark_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0042	shell	direct	high	539	0.998	GCA_003351445.1_00162
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	174823	177345	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	32351	34873	GCA_003351445_1_1_160	GCA_003351445_1_1_160	+	1860196	.	PFAM:PF12571.7	tail-collar-fibre-protein	MASQYFAILTDYGTRAIAHALSQGQPLQLTQFAVGDGNGKAVTPTANATALVHQTHIAPVSAVSLDPRNNKQVIVELTIPENIGGFYIREMGVFDAQNKLIAYANCPESFKPTESSGSGKVQVLRMILKVESSSAVTLSIDNSVIFVTRQQMTPKTITATTQNGFNESGHSHQIAKASTTQQGIVQLTNDTGLESESLALTAKAGKKLAQQTTQLQLNVSQNYIQNSKKSSAVNSESEDNVATSKAAKTAYDKAVEAKTTADGKVGLNGNESINGEKSFENRIVAKRNIRISDSQHYASRGDYLNIGANNGDCWFEYKSSNREIGTLRMHANGDLTYKRQKIYHAGAKPQFNTDIEGKPNTLAGYGIGNFKVEQGQGDANGYKTDGNYYLASGQNLPENGAWHIEVVSGGATNAVRQIARKANDNKIKTRFFNGSNWSEWKETGGDGVPIGAVVSFPRAVTNPVGFLRADGTTFNQQTFPDLYRTLGDSNQLPDLTRSDVGMTAYFAVDNIPNGWIAFDSIRTTVTQQNYPELYRHLVGKYGSISNVPLAEDRFIRNASNNLSVGETQSDEIKKHVHKVRTHWVNSSDSNIFYDKTKTVIDSRLRTATTTDDNLSDNGFMHPLLDSPMATGGNETRPKSLILKLCIKAKNTFDDVQFWVKAFGVVENAGALDAGTLAQNMQALSESVEQKIEENKQSTLREITNAKADIKQQFLQAQENLSQIGTLKTVWQGNVNSRQITLSEKCFGKTLILYLQSSESHRLNDNNDIELVSFEVGAEIEGKRGGGVHWLDVREVNARSNGGRPIYYVEVKTFAVTVDRNGTTIQIQDLAGRFVKRIDIR*	hallmark_hmm	common_virus	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0043	shell	direct	high	2522	1.0	GCA_003351445.1_00163
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	177357	177956	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	34885	35484	GCA_003351445_1_1_161	GCA_003351445_1_1_161	+	1860196	.	PFAM:PF14301.5	tail-fiber-assembly-protein	MKVYFLKENLNSYQIFPIPQNLNNFVEMEINESELETKQLIYFKGQYILVDRQPTELHKWNGNSWIVDEKKKTEIKRELIKNLVDSIDDTAANISSRWIRFAEEYKEREAAAIAFKEANFAGEVSVYISSFATVAGLDNQSASLLILQQAERLRVLQQQLAVQRMRKYELKHEALSDEELKNIHDDIVSKMRQLAEAQQ*	phrogs_hmm	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0044	shell	direct	high	599	0.998	GCA_003351445.1_00164
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	177953	178456	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	35481	35984	GCA_003351445_1_1_162	GCA_003351445_1_1_162	+	1860196	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MIGTKIYLALYKGKKTGKNPNALLARLSDWLTRKLTKGVYSHCEIAVMKEVFVSGHHYETEVMYECYSSSIRDGGVRCKQIDVYDREKWDLIPLDGVTEAQIKAYFDRTLGCKYDWWGAVGIVLGIKQKRSKYFCSEWCFNCIKNSNEGWRFSPNQLAVAFTTVSNN*	phrogs_hmm	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0045	shell	direct	high	503	0.998	GCA_003351445.1_00165
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	178513	179334	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	36041	36862	GCA_003351445_1_1_163	GCA_003351445_1_1_163	+	1860196	.	.	hypothetical protein	MSILGSMTDAVNKTKTPQAPTISTQSPTKDTSQTMAGNVSNLLNSNSLLMNSAAAKGERMAANRGLQNSTIGVESAQRAMLDAAIPIASQDTQNAFAEKQTRLQADLNFQNQSKLNQQQNQFTASQAELERGHQRGMAQLQSDLAYSNQSRLNQAQNQFTASQAALERQQQKDMANLNHQNEMKNLNAQVAANTIGKSIDFTMQITNNFDAQIATILNNSNMKAEDKTKAIEQLKASRDSEIQFMSKFMQGIPTTQQNWSSFPSLGVPSIQIS*	.	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0046	shell	direct	high	821	0.999	GCA_003351445.1_00166
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	179348	179716	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	36876	37244	GCA_003351445_1_1_164	GCA_003351445_1_1_164	+	1860196	.	.	hypothetical protein	MAFWDGAWDAISGAGKWLGETAGSAMDWMVNHKAASNIIGNVIAGAGGYFAQKQAGKDLINQQRELLNLQDQMKSKYSAVPDADWSYKSLTVDDSPGLANGGILTEMKKRSETKGANNGRVA*	.	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0047	shell	direct	high	368	0.997	GCA_003351445.1_00167
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	179700	180872	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	37228	38400	GCA_003351445_1_1_165	GCA_003351445_1_1_165	+	1860196	.	.	hypothetical protein	MAELHDSFGESMEKAGYERASDSDSSFSGGGGWREDNSSDSYRSTSDRWNDHKSRYGKDKVYTDAFNERRNNSSWSGGHSAISRTISEKYHSLSNGQMSAAVPEKDQKTLTGGLFGKSYSNAPYSERTPSIFDRNIRGSMTLNNGDVWSSDPQYSSVRERADINSYDRIKRGEELNLIGRAVGGVFSGVGGAATTPVGKIAESAANFGLSHVGDLSRQFKSNQEQAYYDSLTPEGKAYYDTRVDFINKSYKNAREKYETNDKWIDRGITAAQVGLSALGPPGAMLGSGIGLLGKAINKKDTMTKSLRDLTETLNSNALNNHIAQQNELAEKERQAYKEFMAGRDLRSDNTQPKGILNTMHNRMQNIDPDKQVKTSDVPNLRNYWANIIVS*	.	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0048	shell	direct	high	1172	0.999	GCA_003351445.1_00168
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	180882	181409	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	38410	38937	GCA_003351445_1_1_166	GCA_003351445_1_1_166	+	1860196	.	.	hypothetical protein	MGILDSMTQQSQPQTTEQSAVENPQGSQQQGSMAQMYQMLMQNSINAIANVAQQRIQEKGPEEGIADLVAKAMISNLQAAQQNGKTIPPQVMMQVAKDLAMQLLQQVGVPEEQIDDVLIDILMNALEQFGEATHGALPQEEEQQYVDMINKVSEMESQRRAQVQNGQSKPMQQGA*	.	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0049	shell	direct	high	527	0.998	GCA_003351445.1_00169
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	181413	182177	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	38941	39705	GCA_003351445_1_1_167	GCA_003351445_1_1_167	+	1860196	.	.	hypothetical protein	MGWGGILGAMTQGLGTGIVKNVEQGWKDEETQKLLDWKTAEADKQRAFDSELLDKKYKHEFELEDHRTRNEISAAAAKARISARYSHGGESEAQKNLLGATQTLGIYDSQLHSLQEKLSATEDKEQQNAIAARINAVSAERENYLKRPDTIAAFKGAGQMGQALYMTGGGNMDLYNPKPVERETVAEDVKSSVAPPVRNMIDVNNLTPQQAADIARQKSEDAARLQFSKASADAKDWAQKRTQYQSSTFIPRTF*	.	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0050	shell	direct	high	764	0.999	GCA_003351445.1_00170
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	182293	182424	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	39821	39952	GCA_003351445_1_1_168	GCA_003351445_1_1_168	-	1860196	.	cd22803	Anti-CRISPR type II subtype C5. AcrIIC5 was discovered via a guilt-by association (GBA) approach, which was based on the strong co-occurrence and clustering of acr and anti-CRISPR associated (aca) genes through proximity and homology searches. AcrIIC5 inhibits Cas9 activity in vitro, as well as CRISPR interference activity in bacteria. It also prevents Cas9-mediated genome editing in mammalian cells. AcrIIC4 and AcrIIC5 are the most potent among the type II-C Acr proteins, preventing substrate DNA binding by Cas9, and exhibiting higher specificities for inhibition of type II-C Cas9s. Type IIC CRISPR-Cas systems are the simplest of the type II systems, employing only three Cas proteins, Cas9, Cas1, and Cas2. Almost all type II Acr proteins characterized to date directly interact with the Cas9 endonuclease, although by distinct mechanisms. The type II CRISPR/Cas subtype has a distinct crRNA-guided surveillance complex encoded by cas9 (formerly csn1), cas1, cas2, and csn2 (for type IIA) or cas4 (for type IIB) genes, all located in a single transcriptional unit directly upstream of the CRISPR locus. Cleavage of the DNA target in type II systems is carried out by Cas9 which is an RNA-guided double-stranded DNase with two independent nuclease domains, HNH and RuvC. Due to the reliance of the type II system on a single protein for function, Cas9 homologs derived from different subtypes and species have been utilized for numerous gene editing applications. CRISPR-Cas immune systems are used by certain prokaryotes and archaea to resist the invasion of foreign nucleic acids such as phages or plasmids. Anti-CRISPRs are small proteins which are the natural inhibitors for CRISPR-Cas systems; encoded on bacterial and archaeal viruses, they allow the virus to evade host CRISPR-Cas systems. The CRISPR-Cas-mediated adaptive immune response can be divided into three steps, including the acquisition of spacer derived from invading nucleic acids, crRNA processing, and target degradation. Theoretically, Acr proteins could suppress any step to disrupt the CRISPR-Cas system. Acr proteins are diverse with no common sequence or structural motif, and they inhibit a wide range of CRISPR-Cas systems with various inhibition mechanisms. CRISPR-Cas systems are divided into two classes (1 and 2) and six types (class 1: types I, III and IV; class 2: types II, V and VI). Class 2 systems employ a single multi-domain effector Cas9 protein complex that performs target recognition and cleavage. Acr families are named for their type and subtype which are numbered sequentially as they are discovered.	MKIDNQDFIDFVENCSDEQGIEEFERAKAIVEKDFAFVTVTDD*	mmseqs_cdd	nonviral_gene	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0051	.	unmatched_CDS	none	0	0	.
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	182470	182562	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	39998	40090	GCA_003351445_1_1_169	GCA_003351445_1_1_169	-	1860196	.	.	hypothetical protein	MKTLYFCSLDGNPRKVFQSEELAKQWKEQG*	.	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0052	shell	direct	moderate	92	0.989	GCA_003351445.1_00171
GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote	cenote	CDS	182978	183148	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C11	40506	40676	GCA_003351445_1_1_170	GCA_003351445_1_1_170	+	1860196	.	.	hypothetical protein	MQVIKLLKRIVRRLRLFFCGLFTRPTAPRRAPWASLIPSNPESAPKLRVSLAKKES*	.	hypothetical_protein	C11	40676	142473	183149	GCA_003351445.1|CP031242.1@region_142474_183149@tool_cenote_CDS_0053	.	unmatched_CDS	none	0	0	.
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	284862	285686	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	1	825	GCA_003351445_1_1_256	GCA_003351445_1_1_256	-	1860196	.	2YB1_A	AMIDOHYDROLASE	MAKKYDLHCHSTASDGVLSPTELVHRAYAQGVNVLALCDHDTIAGIDEAEIAAKEVGIELITGVEISTNWEGRGIHIVGLNFDKTHPKMTALLQSQKALREKRAVEIGDKLEKAGIPNAYDGAKALADGEVTRAHYARYLVQIGKVSNDGQAFKRYLGQGKSAFVKAEWADIPTAIETIHAAGGVAVIAHPLRYNMTGKWVRKLIVDFKAWGGDGMEMADCGQTKDQRQMLARWAKEFNLLGSVGSDFHFPCGWIELGKNLDLVDSVIPVWEKF*	hhsuite_tools	nonviral_gene	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0001	persistent	direct	high	824	0.999	GCA_003351445.1_00257
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	285686	286705	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	825	1844	GCA_003351445_1_1_257	GCA_003351445_1_1_257	-	1860196	.	TIGR01036	dihydroorotate dehydrogenase, subfamily 2. This model describes enzyme protein dihydroorotate dehydrogenase exclusively for subfamily 2. It includes members from bacteria, yeast, plants etc. The subfamilies 1 and 2 share extensive homology, particularly toward the C-terminus. This subfamily has a longer N-terminal region. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]	MYQLFRHGIFQMDAEKAHDFTIQCLKLAGNPLFQPILKSLIHAPKGFPKTVMGVNFPNPIGLAAGADKNGDAIEGFGALGFGFLELGTVTPVAQDGNAKPRQFRLIEAEGIINRNGFNNNGIDYLIENVKNARYKGVIGINIGKNKFTPLEQGKDDYIFCLNKAYNYAGYITVNISSPNTPDLRQLQYGDYFDDLLRSIKDRQTILANQYNKYVPIAVKIAPDLTESELVQIADTLVRHKMDGVIATNTTISRDTVMGMKNAEQQGGLSGKPLQHKSTEIIKRLHQELKGQIPIIGSGGIDGLQNAQEKIEAGAELLQVYSGLIYHGPKLVKELVKNIK*	mmseqs_cdd	nonviral_gene	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0002	persistent	direct	high	1019	0.999	GCA_003351445.1_00258
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	286869	287045	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	2008	2184	GCA_003351445_1_1_258	GCA_003351445_1_1_258	-	1860196	.	PFAM:PF09979.8	head-maturation-protease	MKFTDKTTQAATQRTITKDGFLVVPATISKVGVFDYLATELGLKEDGIKKVARTEKSL*	phrogs_hmm	nonviral_gene	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0003	shell	direct	high	176	0.994	GCA_003351445.1_00259
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	287186	288367	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	2325	3506	GCA_003351445_1_1_259	GCA_003351445_1_1_259	-	1860196	.	PFAM:PF04233.13	Minor-capsid-component	MTDDVERAMQQPQGSFFMDDAKGFQAISAKALMKVLEKYEKSDRTSQAENIANGFVGRGDAQNHAEVSTNLKNQTGIDLSAYLRNSPNIAERVNALTAGNIQLIKSIRSQYLDKVQNTVMQAMVRGSLNKDLAAQVKDLGKTTEKRAMFIARDQSSKLNAALTQARHEEVGIKKYMWSTSGDERVRESHAEKDGQIFEYANPPADTGHPGHDVNCRCVQIPVLDDVVNLKSEETELSYQAAEPNKTGKMDLDELFESSIGGGGNKSFSNFGGVNSELITLAKESIGLDITDWQHSIDESSIRHILKQHGNEKAENKRGQRAVTKKDILLLPLVVSAFDSIEYTGTSDSGNETFLIKKEIDDEIFSVQEVRKRHKKIAVKTMWIKRKKKATSSA*	hallmark_hmm	common_virus	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0004	shell	direct	high	1181	0.999	GCA_003351445.1_00260
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	288396	289730	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	3535	4869	GCA_003351445_1_1_260	GCA_003351445_1_1_260	-	1860196	.	PDB:8HDS_J	Portal-Protein	MNILDGIKSLALKLGSKQDQTYYARGLSLTDDLMQIEALWRDNWIANKVCIKRSEDMVRNWRDIFSNDLKSEQLDEFTKLERRLKLRETLTKALQWSSLYGAVGLLLVTDTINITSPLQPTERLKRLIILPKWKISPTGQRDDDVFSPNFGRYSEYTIIGGTQSVLVHHSRLLIINANDAPLSDNDVWGVSDFEKIIDVLKRFDSASANVGDLIFESKIDIFKIAGLSDKISAGLENDVAHVISAVQSIKSATNSLLLDAENEYDRKELSFGGLKDLLTEFRNAVAGAADMPVTILFGQSVSGLASGDEDIQNYHESIHRLQETRLRPVLEVLDTLLCNELFGGQPDDWWFEFLPLTVVKQEQQVNMLNTFATAANTLIQNGVVNEYQVANELRESGLFANISAEDIEEMKNVNEFAGNFEEPENTEDAQVQASEDEQENGALV*	hallmark_hmm	common_virus	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0005	shell	direct	high	1334	0.999	GCA_003351445.1_00261
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	289732	291075	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	4871	6214	GCA_003351445_1_1_261	GCA_003351445_1_1_261	-	1860196	.	PDB:4IDH_A	Large-Terminase	MSQLNIQFPTKFRPLFESIWPFIIFYGGRGSGKSFSIARALVLRAYQSPVRVLCCREIQKSISDSVIQMLADQIEMLGLQNFFDVQKTQIIGQNGSRFTFAGLKTNITSIKSMTGIDVVWVEEGENVSKESWDILIPTIREDGSQIIVSFNPKNILDDTYQRFVIHPPERCKSVLVNWQDNPYFPKELMEDMEQMRERDYELYRHVYEGEPVADSDLAIIKPVWIECAVDAHLKLGFTAKGMKKVGFDVADEGADSNDNAFVHGSVVLDIEVWKNGDVIDSANRTNQSAVKFKADLIIFDSIGVGAGVKAHFKRLPKSLQVEGFNAGGAVAYPEREYIKGKKNQDMFSNIKAQSWWALRDRFYKTYRAVKHGDVYPDDELISLSSNIKELEYLKAELSRPRVDYDNNGRVKVESKKDMKKRGIPSPNMADALVMCYATTKPKSLLDL*	hallmark_hmm	common_virus	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0006	shell	direct	high	1343	0.999	GCA_003351445.1_00262
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	291062	291574	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	6201	6713	GCA_003351445_1_1_262	GCA_003351445_1_1_262	-	1860196	.	PFAM:PF03592.15	Terminase-small-subunit	MSDVKGKSTSGRGLTPKQEKFCQLYIELGNASEAYRQSYDCQDMKSESINRLAKKELDKIKIRSRVDVLQQEHRQRHNLTLDNIIADLQEYRDICMGRKPLTITTVVKNAQEGTAQSVNTECFVFEPTGANKALELLGKHLGMFTNKVDVTTDGKPLPTVINVTFSDEPA*	hallmark_hmm	common_virus	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0007	shell	direct	high	512	0.998	GCA_003351445.1_00263
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	291619	291897	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	6758	7036	GCA_003351445_1_1_263	GCA_003351445_1_1_263	+	1860196	.	COG1396	Transcriptional regulator, contains XRE-family HTH domain [Transcription]. 	MNHLLTFYEKIIFTNPLETGIPEAVAKLALLNDYSALRAWREHLGLTQAEVASRLGISQAAYSQHENSQTLRKSTRIKIATALGINSAQLDF*	mmseqs_cdd	nonviral_gene	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0008	shell	direct	high	278	0.996	GCA_003351445.1_00264
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	291899	292141	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	7038	7280	GCA_003351445_1_1_264	GCA_003351445_1_1_264	-	1860196	.	PDB:5CYB_A	Lipoprotein	MLTLVCLSLFLTACTNKITTKPEYIYPPQAYTAPCVKTAFTGETYGDVVIQLVKVTAERDKCASQVDHLNKWINQAKGGK*	common_virus_hmm	common_virus	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0009	shell	ambiguous	low	49	0.202	GCA_003351445.1_00265
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	292092	292397	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	7231	7536	GCA_003351445_1_1_265	GCA_003351445_1_1_265	-	1860196	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MALAGVVVVLIGALRYQSSVIDELEITTKQQENTIQQQEDANKSLSLALQQERYAIIEQQERNNEIERIATENAESVKTIIKTQPCAHTRLPQSVLDRLHE*	mmseqs_cdd	nonviral_gene	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0010	shell	direct	high	305	0.997	GCA_003351445.1_00265
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	292408	293010	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	7547	8149	GCA_003351445_1_1_266	GCA_003351445_1_1_266	-	1860196	.	PDB:3WH1_A	Chitinase-	MTMMISEVTFNKIFPHAVKGVYQAISAQIEKAGCVNKMQQAMFLAQCGHESGGFTRFKENLNYSWLGLSKTFRKYFPDPLIAKKYERKPELIANRVYANRLGNGDEKSGDGWKYRGRGLIQITGKDNYAAFRKWLGRDIEPEDVASNLDLSVKTAIWYWKCCELADLNSVEKVTRRINGGLNGIDERCKLYRALMVTDND*	common_virus_hmm	common_virus	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0011	shell	direct	high	602	0.998	GCA_003351445.1_00266
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	292979	293335	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	8118	8474	GCA_003351445_1_1_267	GCA_003351445_1_1_267	-	1860196	.	TIGR01594	phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]	MPIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPAIRYVLIDAAMCASIAGVAVPICTHLFGHTEYSSFLGTMIGFVGTEKIREFLFKFINRRIEKDDNDDFRSDI*	mmseqs_cdd	nonviral_gene	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0012	shell	direct	high	356	0.997	GCA_003351445.1_00267
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	293672	294457	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	8811	9596	GCA_003351445_1_1_268	GCA_003351445_1_1_268	-	1860196	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MFDSATNTIPKGNKSAGFLTSFELSNARFIGGFHQKEIKMTTQIQFSIFNFKNSPVRTITDPNSEIWFCGTDVCDILGYVNAPDAMKKHCKEAGIAKRYISYPSGRKEAIFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQLALPEPEKKFSFEFTEYELQQLVWLWFAFMRGIVTFQHIEKAFRVLGSNMSSQIYGQAYEYLSVLRSTNQILNRITSDFDIDQMTNWRVLKHLRGFNPKAVKIDF*	common_virus_hmm	common_virus	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0013	shell	direct	moderate	669	0.851	GCA_003351445.1_00269
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	294698	295663	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	9837	10802	GCA_003351445_1_1_269	GCA_003351445_1_1_269	+	1860196	.	pfam10546	P63C domain. This domain was identified by Iyer and colleagues.	MVSTSLTAEKRKERAEKAALARWEHKKALEELPLAIHEGVLSIGDKSLDVAVLQNDLRIISSASVFEALDRPNRGSRGGAITENEELIKLPAFMDANNLKPFINQDVIDVIKGVKYRTKDGKIKEGYDATILPVVCDIYLRAREEGALVGKQQNTAQKAEILIRSLAKVGIVALVDEVTGYQDARAKDALAKIFEAFVAKELQPWVKTFPLDYYKELCRLYGVQFPPKNNNQFPQFFGHITNNAVYARLAPELLPELKKSASKQAKKVKLHQFLTEDVGHPKLREHLSSIVTLLKLSKDKDNFYEMLDKIHPKLTLQEGQE*	mmseqs_cdd	nonviral_gene	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0014	shell	direct	high	965	0.999	GCA_003351445.1_00271
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	295713	296084	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	10852	11223	GCA_003351445_1_1_270	GCA_003351445_1_1_270	-	1860196	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MNIDVISVEFGYWATPRYETEFPRVAAGFAEMKCDARYAEKYRMRPISDELGMEIDGYLGVIRKVTPELYDVFVLTYIKRWEKQEIWRYLHISRREYFNRLKTVKTSLLLLLSTEGKQCLFIA*	phrogs_hmm	hypothetical_protein	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0015	shell	direct	high	371	0.997	GCA_003351445.1_00272
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	296115	296780	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	11254	11919	GCA_003351445_1_1_271	GCA_003351445_1_1_271	-	1860196	.	PFAM:PF05551.10	homing-endonuclease	MKCKIDGCNREAMYKADCVCQMHYFRFMRNGTYDLLPKPIRKYRRHNGKGYQLIFEPRHQLAMSDGYVYEHRFVIYSIYQNNLPNCKLCGCKLTWSSCHIDHIDNDITNNTLENLRPICRACNVMRSHTLIPKYTHKGHSKITFNGLTMTAAEWARQDGVTVAGNTILRRIRDGWSIERALFETSSTHPNAAVKHTTTKYKNRFEVKSTGISLDLRLQGDD*	common_virus_hmm	common_virus	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0016	shell	direct	high	665	0.998	GCA_003351445.1_00273
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	296764	297153	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	11903	12292	GCA_003351445_1_1_272	GCA_003351445_1_1_272	-	1860196	.	PFAM:PF05766.11	NinG-recombination-protein	MVRGHWLKALQKEVNKFIRLRDKGQPCIACGTVWKPSFQASHFIPQGRSSFLRFDERNIHSGCIRCNLFVGGGNIHGYRPRLVEKIGEQEVEWLEENQHRIKKWEISELKEMLKLYRLKNKELENEMQD*	common_virus_hmm	common_virus	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0017	shell	direct	high	389	0.997	GCA_003351445.1_00274
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	297107	297328	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	12246	12467	GCA_003351445_1_1_273	GCA_003351445_1_1_273	-	1860196	.	pfam05766	Bacteriophage Lambda NinG protein. NinG or Rap is involved in recombination. Rap (recombination adept with plasmid) increases lambda-by-plasmid recombination catalyzed by Escherichia coli's RecBCD pathway.	MAKEYKCKVCGKAFVKTFSSTQKVCSPECAIKLVREQSRKRQKKAEKQEQIERKKRLLDGERALAKSSSKRGK*	mmseqs_cdd	common_virus	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0018	shell	direct	high	221	0.995	GCA_003351445.1_00275
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	297417	297836	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	12556	12975	GCA_003351445_1_1_274	GCA_003351445_1_1_274	-	1860196	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPTDDKNPLVVKIQPITRNLEQNAKFHAMCQDVANQAEFMGRKLTMEQWKVLFISGHAIATNQKADVVPGLEGEFVNIRESSAQMSVSRMASLIEYVTSWGVQNGVRFNDRWGFK*	mmseqs_cdd	common_virus	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0019	shell	direct	high	419	0.998	GCA_003351445.1_00277
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	297873	298097	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	13012	13236	GCA_003351445_1_1_275	GCA_003351445_1_1_275	-	1860196	.	.	hypothetical protein	MTSYKCPKCGAELEDFYTPDYFISSSEWDDDRFRCNGHLIEPIPFPQVSKFSAVNRTKSCGYFGLEDLGVEYKE*	.	hypothetical_protein	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0020	shell	direct	high	224	0.996	GCA_003351445.1_00278
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	298094	298714	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	13233	13853	GCA_003351445_1_1_276	GCA_003351445_1_1_276	-	1860196	.	PFAM:PF06992.10	Replication-protein-P	MNQLTNQSLHQGVSAQVEKFIDTLFDQLCASCPQLLNLTPERLQVVKRQWILGFAENGITKITQVKRGMAEMRAKPNGYLPSVGEFIQACKVLDYHVLGLPNEAELYQRYKTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKAIPKLLTKAAEKVRSNFPFEDIPKMIPEKPRFYDKAKADKARDSLMAMMKGALQ*	rep_hall_hmm	common_virus	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0021	shell	direct	high	620	0.998	GCA_003351445.1_00279
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	298711	299433	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	13850	14572	GCA_003351445_1_1_277	GCA_003351445_1_1_277	-	1860196	.	pfam13730	Helix-turn-helix domain. 	MSMRLMVQAMNCKVGNPARKLVLLKLADNANDDGICFPSYQYIADKCEMTRRSAISHIECLIKMGLVSKKERKNKDGSISNLYLLHLEQGSENFALGGENISLGSENFALGGSENISPITSHSLEPVNEPKKTTQKSESEILLERFGITGQLAKDFIAHRKTKRGAISETQLSRLQKQADKAGISICEVVEICIERNWQGFNASWDWRDEKLRTSQAQKMSFEEKNALPWNRPEDWENVL*	mmseqs_cdd	common_virus	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0022	shell	direct	high	722	0.999	GCA_003351445.1_00280
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	299430	300098	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	14569	15237	GCA_003351445_1_1_278	GCA_003351445_1_1_278	-	1860196	.	PFAM:PF03374.13	KilA-protein	MNQLLTMTKENASILTMSSREIAEITHKEHKNVLRVIRDLIEQNLVAQIEPLKFEYRNQWFDYYELNKRDTFVVVARLSPEFTAAVVDRWQALENRQKPTALIPQSFSEALMLAAQLQAEKERNAPKVAFVDHYVEVGTSKSFRETAKILKISERALVNRLVEDKYLYRQSGVLLPYQSAHTKDLFTVKTGTAEHGHNYTQTRVTSKGIEFIASRYASELML*	common_virus_hmm	common_virus	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0023	shell	direct	high	668	0.999	GCA_003351445.1_00281
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	300145	300585	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	15284	15724	GCA_003351445_1_1_279	GCA_003351445_1_1_279	-	1860196	.	PFAM:PF06892.10	CII-like-transcriptional-activator	MEMKKVIIEMVDRIPGGRSAVAGFLGFTESELKNRLYQIKGQRFKNEELIALQLEYGCTDFIDELCRNSGGRFVPDVAEDELDKVELANLQLHELSARGLLFAALEKALEDGEITSKEEDKIRQALSKHLAATQHSIECAIVLHKK*	phrogs_hmm	nonviral_gene	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0024	shell	direct	high	440	0.998	GCA_003351445.1_00282
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	300634	300822	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	15773	15961	GCA_003351445_1_1_280	GCA_003351445_1_1_280	-	1860196	.	COG4197	DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily [Transcription]. 	MLPIEKAYEIVGGISAMARHFNLTPWAVSKWREKVPAERCAKIEELTDGKVKKSELRPDLWD*	mmseqs_cdd	nonviral_gene	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0025	shell	direct	high	188	0.995	GCA_003351445.1_00283
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	300933	301631	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	16072	16770	GCA_003351445_1_1_281	GCA_003351445_1_1_281	+	1860196	.	PDB:2FJR_A	Repressor-protein-CI	MTDLASRLNELMAKQGKNIVDLQKAVGVTYEMARRYTLGTATPRDNKIEAIAKYFGVTPAHLKYGTVDSLENQVTSNVKDVGSFDLWDRNTPLNSDEYAVPFYQDIRLAAGNGFADDIADYNNFKLRFSKSTLRKQGVQYENAVCVIADGNSMEPVIPDGTTVGIDLGNKTIRDGKIYAINHGGLLRIKLLYNMPNEQVKIRSYNTEEHPDEIAELQDISVLGKVFWYSVLL*	common_virus_hmm	common_virus	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0026	shell	direct	high	698	0.999	GCA_003351445.1_00284
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	301683	302762	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	16822	17901	GCA_003351445_1_1_282	GCA_003351445_1_1_282	+	1860196	.	.	hypothetical protein	MDIRLWRSIVRQRTLRALTSKEKKIRQRGGKPKYKHLAHKSFNLFEVIAPYKIILAKEIGYEFVAFKEELEEKAKLAARSRSRLKLNFRDTDIIDAAACSVLIAVLDTIKSQYRTLKFQIVRPKSKPADHRKHIPYDVDAIFCHIGLYKSLGFNYTSSSSQENVKCWHYVYSDSADGEITKPLLDELKSMGVKGIYPSYIEAIANAVEHAYAQNIYSEREFPIKRWWMLLAILEGKLSLFVCDLGHGIPNTLEKTQKANVLSAIWNRLKQLGKPTKDCLYIKASTLIKETRTGLGHRGKGGSDIRAFIDKTPGSRLIIRSNRGMYVYNGKDKPDLTKESRYSINGTVVQWNIPLQEIKE*	.	hypothetical_protein	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0027	shell	direct	high	1079	0.999	GCA_003351445.1_00285
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	302765	303100	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	17904	18239	GCA_003351445_1_1_283	GCA_003351445_1_1_283	+	1860196	.	PF14213.6	STAS-like domain of unknown function (DUF4325)	MQTIYVKDFSQYPGPRYIKDGKASGEEFRDSILIPAIKRDPDIILNLDDTEGYGSSFLEETFGGAIRKGISPEVVLNLVKNLISNDDHDIIDEIKSYVEKEIEILSLKDNK*	hhsuite_tools	hypothetical_protein	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0028	shell	direct	high	335	0.997	GCA_003351445.1_00286
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	303097	303342	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	18236	18481	GCA_003351445_1_1_284	GCA_003351445_1_1_284	+	1860196	.	.	hypothetical protein	MTLSDLIAFSALIVSIFALPISYILGARGLKNTAYNGELSKLSDLCDLVFTEALNIHKKTQSNLSDEMDYHLMIAFHKRLN*	.	hypothetical_protein	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0029	shell	direct	high	245	0.996	GCA_003351445.1_00287
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	303374	303511	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	18513	18650	GCA_003351445_1_1_285	GCA_003351445_1_1_285	+	1860196	.	.	hypothetical protein	MELREVKQAITDHLVSDNLEVRNTAMRGLIYKLDALKTFFTPKFI*	.	hypothetical_protein	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0030	.	unmatched_CDS	none	0	0	.
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	303825	303995	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	18964	19134	GCA_003351445_1_1_286	GCA_003351445_1_1_286	-	1860196	.	COG3422	Uncharacterized conserved protein YegP, UPF0339 family [Function unknown]. 	MYFQIFQGVNNQWYWRLKAANHETIAVSEGYTTKQNCLHCIGLVMDTDRKTPIYES*	mmseqs_cdd	nonviral_gene	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0031	shell	direct	high	170	0.994	GCA_003351445.1_00288
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	304010	304231	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	19149	19370	GCA_003351445_1_1_287	GCA_003351445_1_1_287	+	1860196	.	.	hypothetical protein	MQEEMKRYAISYHFDGKRWATDVYAHSFEEAEEKLKAMSQGTVDGEIHLSVYIPENPLSKVSRLITRIAKKFM*	.	hypothetical_protein	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0032	shell	direct	high	221	0.995	GCA_003351445.1_00289
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	304559	304717	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	19698	19856	GCA_003351445_1_1_288	GCA_003351445_1_1_288	+	1860196	.	.	hypothetical protein	MEEKQEKSLSDKDKNLIKQAVLESADKNTNLTPSELAESVCSAVMFIDSYGR*	.	hypothetical_protein	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0033	shell	direct	high	158	0.994	GCA_003351445.1_00290
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	304695	304898	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	19834	20037	GCA_003351445_1_1_289	GCA_003351445_1_1_289	-	1860196	.	.	hypothetical protein	MKKIAADKIALVMARDILKTNSQYLREVNEYVAEDIARFVSTLSSRLQESIDDSISSSDIFNAHKNQ*	.	hypothetical_protein	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0034	shell	direct	high	203	0.995	GCA_003351445.1_00291
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	305499	306770	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	20638	21909	GCA_003351445_1_1_290	GCA_003351445_1_1_290	+	1860196	.	.	hypothetical protein	MKTVKARLTELKNLINTKINEDYEWMGEIKSPEIIKEIEQLYPLIEKIEKSGKSLEISYAKYISLQLIKKIIRILNKKRASNKWDEYDVNSFILSLIKLRMTIKELYLIEVKGELRTEEELNAIAADISKAKLNLEEHISLEEQLVENKKEFENLKNSLITLKKSYNDAQEQITEISQWHEQSEKLSGDISNYEFTAQNNLTKITTLATTAETNKPQIEKYHEDIEGMIKLFNKQKEEIEMIIEDANRASMAGSFKTQSENIDSKMKAVDKILLGSLVATSVISLFNYSTSLSAADSLNILQFLAKSIVTIPLLVIAWLKAKERAYLFRLREDYNYKYSSAMAFEGYKKQVQEQDPKLHQQLLQIAVDNLGINPTKVFDKDLKSTPLETIIDGVGKRLDKAVDGIKGEVNDIPKKTKELIDDE*	.	hypothetical_protein	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0035	shell	direct	high	1271	0.999	GCA_003351445.1_00292
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	307108	307359	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	22247	22498	GCA_003351445_1_1_291	GCA_003351445_1_1_291	+	1860196	.	COG3561	Phage anti-repressor protein  [Mobilome: prophages, transposons]. 	MTNSNLIPVFNGLIQNQPVQICNARELHAFLEIQTRYNDWIKNRINEYGFIQDEDYLVITERTNGRPRKEYHITLDMGKELRN*	mmseqs_cdd	common_virus	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0036	shell	direct	high	251	0.996	GCA_003351445.1_00294
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	307663	307830	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	22802	22969	GCA_003351445_1_1_292	GCA_003351445_1_1_292	+	1860196	.	.	hypothetical protein	MESIKLSQKAEEEIVNAARMAALSNLTEKSQNLITLEDIAIYFGDTIKPLPRLFQ*	.	hypothetical_protein	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0037	shell	direct	high	167	0.994	GCA_003351445.1_00295
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	307939	308358	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	23078	23497	GCA_003351445_1_1_293	GCA_003351445_1_1_293	-	1860196	.	PDB:1Z19_B	Integrase	MELQSQGLQPDTLFSDVIKRYLNEITPTKRGEKHEFNRLNRFLRHPVTDKYISDVSRIGDEELCFDIKSSVLDATFRKLKKLAEREYLHFHDTRREALTRLSKKVDVMTLAKISGHKDISILQNVYYAPDMAEVAELLD*	common_virus_hmm	common_virus	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0038	shell	direct	high	419	0.998	GCA_003351445.1_00296
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	CDS	308745	308837	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	23884	23976	GCA_003351445_1_1_294	GCA_003351445_1_1_294	-	1860196	.	.	hypothetical protein	MAAEKLTKKRLAQILIMLCILIIAFVWRYF*	.	hypothetical_protein	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_CDS_0039	shell	direct	moderate	92	0.989	GCA_003351445.1_00298
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1377000	1377461	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	1	462	GCA_003351445_1_1_1322	GCA_003351445_1_1_1322	+	1860196	.	PRK10802	peptidoglycan-associated lipoprotein Pal. 	MNKFVKSLLVAGSVAALAACSSSNNDAAGNGAAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVSYGEEKPAVLGHDEAAYSKNRRAVLAY*	mmseqs_cdd	nonviral_gene	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0001	persistent	direct	high	461	0.998	GCA_003351445.1_01367
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1377895	1378920	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	896	1921	GCA_003351445_1_1_1323	GCA_003351445_1_1_1323	-	1860196	.	PDB:1Z19_B	Integrase	MPIRKNKNGVWQIDFTTPSGERVRCSSKTTDKKLAQHLHDKLKHEAWQVDQLNKKPEKTVEQALILLLKDAEHKKDKLTKIQHAKYWRDEIGNKLLSSLTSEDIQNAIPTHVVRTGKILSPATQNRYRSSIMRAINLAKQAGWIDVVPYIAKNSEPKKRIRWITEKEAERLLDSLNLNWMKDVCQFALLTGARMTEILSMTWDKINFANKMAIVTGDIAKSGRGRSLPLSDDAINLIKERMKYQVSPYVFHSGTGKLRDDISRRDFKRALQRANIKNFRFHDLRHTWASWHIQRGTPLMVLKELGGWETIEMVQKYAHLNADHLLSYVNQVKFSSNTRLAR*	common_virus_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0002	shell	direct	high	1025	0.999	GCA_003351445.1_01370
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1379209	1379868	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	2210	2869	GCA_003351445_1_1_1324	GCA_003351445_1_1_1324	-	1860196	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MFTYGSICSGIEAVSVAWKGLSKPLWFSEIEPFPCAVLAYHYPNIPNLGDMTTLPEKILNREIPAPDVLVGGTPCQAFSVAGLRNSLDDERGNLTLTLIHILEAIDYVRYQDGKQPCVLLWENVPGVLSTKDNAFGHLLAGLVQEREPLQPTGRKWTNAGYVHSSRTIAWRILDAQYFGLAQRRKRVFLVASARGRRRPERFLKPIYNPLNRPILFTKR*	common_virus_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0003	shell	direct	high	659	0.998	GCA_003351445.1_01371
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1379876	1380235	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	2877	3236	GCA_003351445_1_1_1325	GCA_003351445_1_1_1325	-	1860196	.	.	hypothetical protein	MNEINIKLPLHKFQNLMISHVRYSLPRHTYIVSETIHDVKTYWSVLSSNTREVITRDINEHLKRWASDRNNAFHKLDYDSWEELFDWINENRSSPSTTATTAKPIVPVLPVINPKQRKK*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0004	shell	direct	high	359	0.997	GCA_003351445.1_01372
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1380232	1380477	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	3233	3478	GCA_003351445_1_1_1326	GCA_003351445_1_1_1326	-	1860196	.	.	hypothetical protein	MRLLKRLAEKVLIDDLRRLDKHIDKSIELHELKLRKLGELIKSLEAENNQLKRENATLETELRAIKQERIFSKRKKKSKRK*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0005	shell	direct	high	245	0.996	GCA_003351445.1_01373
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1380474	1381370	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	3475	4371	GCA_003351445_1_1_1327	GCA_003351445_1_1_1327	-	1860196	.	PRK00321	recombination associated protein; Reviewed	MYWFRNAIIYQLTKQIDFENIEKQLKECEFTPCGSADVSHFGWSAPLVTSENLAHQANGKILLVAKREEKILPVEVVNRELNKRITALEEKEQRKLKKVERSSLKDDVIATLLPQAFSRIKTTALYIDTLKQLIFVDTASSKTAEDVLALLRKSLGSLPVVPLAFNCAPCEVMTRWVTDTAPDWLILRKEVEIREKEDLGVIHCKQKDIEDEEIIDLVQNGLISKLALEWENNLKFILVEDGTLKRLKFDDNITEQNDDIVKEDVTARFDVDFVLMASVLGKTVDSLIKEFGGIRDRL*	mmseqs_cdd	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0006	shell	direct	high	896	0.999	GCA_003351445.1_01374
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1381495	1382112	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	4496	5113	GCA_003351445_1_1_1328	GCA_003351445_1_1_1328	-	1860196	.	.	hypothetical protein	MAEENKEIIAYKGFNQDWACRGYQYEIGKTYEHKGNVKACESGFHACEYPLDVLSYYSPAVSKFAVVKMSGETSKDSDDTKIASAKITIETEINLPEMIKKAVEWIKGKVDWDAAKVSNTGYWSAATNTGYRSVAEVSGKQSIAVALGWQSKAKASINGAIVCVYRNHDGELIHIKASKVGENNIKADTWYTLDEIGEFVEVKDD*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0007	cloud	direct	high	617	0.998	GCA_003351445.1_01375
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1382174	1382608	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	5175	5609	GCA_003351445_1_1_1329	GCA_003351445_1_1_1329	-	1860196	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MARNTNTVILVGHLGSDPEIRQFQNGGQIATFNLAIGDDYRDKQGNTVKRTHWIPIVVHGNSADVARQYLQKGSKICVTGKLVQESWQDQNGNNRTALKVATQSFEMLDIKASSETQQPTKDKEKPDPLSAAAEQDGFNDDIPF*	common_virus_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0008	shell	direct	high	434	0.998	GCA_003351445.1_01376
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1382608	1383252	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	5609	6253	GCA_003351445_1_1_1330	GCA_003351445_1_1_1330	-	1860196	.	PDB:3SZ4_A	Exonuclease	MYQLKARCSGLADLMAKPKSGNGISATAKSAVRKIVKFDLFGYQDFEGNKYTEKGIALEEQAIKLSGRKRGLPLKKNTERRENDWITGECDIYVPSRRLIIDTKCSWDIGSHPFFADEAEEKAKKAGYDAQMQGYMWLWDCDEAQIDFVLLPTPYDQLSSYDDPNRYIDLVEQIPQEKRITTVTIKRDEKIIEKIKERVEIAQEYYQQLIQEMR*	common_virus_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0009	shell	direct	high	644	0.998	GCA_003351445.1_01377
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1383458	1384096	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	6459	7097	GCA_003351445_1_1_1331	GCA_003351445_1_1_1331	-	1860196	.	pfam10548	P22AR C-terminal domain. This domain was identified by Iyer and colleagues. It is found associated with pfam10547.	MSNLTILKTAIRTFENLYSLNDLHIASGAEAKHQPSLFIRLDATQELISEIQKETDKENILQSFRSGVNRGTYACEELVIAYAMWISPKFHLIVLRAFLAMHRNQPQQLSLPEPQKFTFEFTEYELQQLAWLWFAFKRGVGTFQHIEKAFNVLGSNMSGQIYGQAYEYLSVLRSTNQILNRITSDFNIDPMTNWRVLKHLRGFNPKAVKIDF*	mmseqs_cdd	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0010	cloud	direct	high	638	0.998	GCA_003351445.1_01379
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1384357	1385268	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	7358	8269	GCA_003351445_1_1_1332	GCA_003351445_1_1_1332	-	1860196	.	PFAM:PF03837.13	RecT-protein	MTNQVQHQQNKQPPALKTFFESANVQNKIKELVGKNAATFATSVMQIANSNSMLKTADPMSIFNAACMAATLNLPLQNGLGFAYIVPFRNNKEKKTEAQFQIGYKGFIQLAQRSGQFKRLVALPVYKKQLIKKDFINGFEFDWEQEPEQNENPIGYYAYFKLVNDFSAELYMSHDDIVKHAQRYSQTFKKGYGVWHDNFEAMALKTVTKLLLSKQAPLSVEMQQAVLADQAVVKDVENQEFNYTDNIQEAEFLAVVDEATFEQCKQSIANGETTLQELCDSGAYEFSQEQLTKLEELENQKAE*	common_virus_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0011	shell	direct	high	911	0.999	GCA_003351445.1_01380
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1385281	1385574	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	8282	8575	GCA_003351445_1_1_1333	GCA_003351445_1_1_1333	-	1860196	.	.	hypothetical protein	MKPYADHYAQLDAAHQRKVDWQAGYEIALDEVATEIDNDLKQGDQTHYHELTEMLCDNDNFWLAIGSGASYEPYRQEAIKKIAERELNDRMNDYDPD*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0012	shell	direct	high	293	0.997	GCA_003351445.1_01381
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1385571	1385915	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	8572	8916	GCA_003351445_1_1_1334	GCA_003351445_1_1_1334	-	1860196	.	.	hypothetical protein	MKRSKSAFFQEKQSFTHFMNGSEKWLNRICYFLAALIIALIVGGISLHANANPTDWHDNELSQQIQQETRCELKGGIYENGVCLPPNLTLAAEKELQDYTAQKQAEINRTWSKQ*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0013	shell	direct	high	344	0.997	GCA_003351445.1_01382
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1386108	1386329	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	9109	9330	GCA_003351445_1_1_1335	GCA_003351445_1_1_1335	+	1860196	.	.	hypothetical protein	MNKAKADTLALLLARDIAKTSSSSTALPFTYLNRNSAESIADFVEMLSKRFEALDDSVSLPHILNAYKNQSDK*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0014	cloud	direct	high	221	0.995	GCA_003351445.1_01383
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1386298	1386633	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	9299	9634	GCA_003351445_1_1_1336	GCA_003351445_1_1_1336	-	1860196	.	.	hypothetical protein	MSVRYCGNEKRSQSVGKAKRNITFQNTFASTETQQHVKPLRMIDEVCFEMVTIKQTRLKMEEKQENSLSDNDKELIKQAVLESAAKNTNFPPDKLAKSICDAIYLIDSYKH*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0015	shell	ambiguous	low	159	0.473	GCA_003351445.1_01384
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1386735	1386956	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	9736	9957	GCA_003351445_1_1_1337	GCA_003351445_1_1_1337	-	1860196	.	.	hypothetical protein	MQDEMKRYAISYNFKGSKWAAEIYAHSFEEAKEKVKAMSQATVDGVIHHSIYIPVKEKSWLARLIVSIVKKFT*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0016	shell	direct	high	221	0.995	GCA_003351445.1_01385
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1386971	1387141	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	9972	10142	GCA_003351445_1_1_1338	GCA_003351445_1_1_1338	+	1860196	.	COG3422	Uncharacterized conserved protein YegP, UPF0339 family [Function unknown]. 	MYFQIFKGVNNQWYWRLKAANHEIIAVSEGYTTKQNCLHCIHLVMDTNRNTPIYES*	mmseqs_cdd	nonviral_gene	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0017	shell	direct	high	170	0.994	GCA_003351445.1_01386
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1387502	1387669	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	10503	10670	GCA_003351445_1_1_1339	GCA_003351445_1_1_1339	+	1860196	.	.	hypothetical protein	MKKEFKKWLISLNCEGINSLGINEIVSRVDEELRIVRANEQERIVLEELIAAFNE*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0018	shell	direct	high	167	0.994	GCA_003351445.1_01387
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1387769	1388584	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	10770	11585	GCA_003351445_1_1_1340	GCA_003351445_1_1_1340	-	1860196	.	pfam11236	Protein of unknown function (DUF3037). This bacterial family of proteins has no known function.	MKQPILYSFVRYRPYFETGEFVNVGLLMCEPEKKKLTYQLVPKNNKRVNDFFYKSKMFETVRETINDELQYIVSQPFNGSAQDMATFFHHYIDVKEGIVQYSNAAVGMVDDPQGYFNKLYTQFIQNAGVKPENQEQAILKHYKTLFRQENDSVLAQYKQYMVNGDFAKFALPLALKNQQDKHILKAVKPLAFDQVESPSMIEHCDSWVAKINRAEQEGFIKRENILFALDTPNTAHKANILDTIKRTFDHFKLQHISWDEDKQIINFAKAI*	mmseqs_cdd	nonviral_gene	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0019	shell	direct	high	815	0.999	GCA_003351445.1_01388
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1388581	1389351	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	11582	12352	GCA_003351445_1_1_1341	GCA_003351445_1_1_1341	-	1860196	.	3AKJ_B	CtkA (E.C.2.7.11.1)	MKAEEVLLDKRMDKIIVIRERMEMGVTRPFICQTDKGNWFIVKTLSMMPIGQLLAEVIGSKLAHEIGLPCPSIDFVEVSHESTQYVSSEWRQDLPNGIAFASSFVVNAKIAKTVQVKNPAFLSEPEQKLLYMFDRWILNSDRTSSQVGTGNINLLFDEQQQKILVIDHNLAFDERADFSEHIFSQKNREWRLDWVDKQTFMDKAVDILKNFDDIYQSIPDDWFVEDEVFHKIDQQINRIKALLNRITQENYWDNIE*	hhsuite_tools	nonviral_gene	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0020	shell	direct	moderate	708	0.918	GCA_003351445.1_01389
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1389379	1390044	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	12380	13045	GCA_003351445_1_1_1342	GCA_003351445_1_1_1342	-	1860196	.	PDB:2FJR_A	Repressor-protein-CI	MITEEKIKQDFAARLDIACKRKNLPEKGRGKVIADILKITPKAVSKWFNAETLPTQANIYVLADFLGVTKEWLTYGDKNASIEKIEKQISYPLLSPIQAGLWTDIKSLEGFDGYEMIPSTVIASENSFYLRIEGKSMLPRFNEGDLVLIDPDIVPTPGKFVAAINGDNEATFKQYKELGTRTPEGIPHFELVPLNPMFPTLSSLNQEIRIIGVARERVETL*	common_virus_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0021	shell	direct	high	665	0.998	GCA_003351445.1_01390
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1390144	1390383	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	13145	13384	GCA_003351445_1_1_1343	GCA_003351445_1_1_1343	+	1860196	.	PFAM:PF10078.8	transcriptional-repressor	MGNLKHIIDSLGAAKVADLCGLSVRAVYKWRTSNSLPRTEYTGETRYSEILSQALGGSVSAEEIRHFSKPIKSGSAIIA*	phrogs_hmm	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0022	shell	direct	high	239	0.996	GCA_003351445.1_01391
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1390438	1390878	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	13439	13879	GCA_003351445_1_1_1344	GCA_003351445_1_1_1344	+	1860196	.	PFAM:PF06892.10	CII-like-transcriptional-activator	MAMKKVIMEMIEKIPGGKSAVAGFLGFSEAELNNRLYQTKGQRFKNEELIAIQQEYGCTQFIDELCRLAGGRFVPDVAENELDKVELANLQLHELSARGLLFAALETALEDGEITSKEEDKIRQALSKHLAATQHSIECAIVLHKK*	phrogs_hmm	nonviral_gene	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0023	shell	direct	high	440	0.998	GCA_003351445.1_01392
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1390900	1391601	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	13901	14602	GCA_003351445_1_1_1345	GCA_003351445_1_1_1345	+	1860196	.	PFAM:PF03374.13	KilA-protein	MANSLRNIQMNQLLTISKENTSTLTMSSREIAELINKNHSDLCRSIERLIAKEVIWGYQPMAYTHPQNGQTYYEYHLTKRDSLIVVAQNCPEFTAAIVDRWQALENQQKPTALIPQSFSEALMLAAQLQAEKERNAPKVAFVDHYVEVGTSKSFRETAKILKMPERALVNRLVEDKYLYRQSGVLLPYQSARTKDLFTVKTGTAEHGHNYTQTRVTSKGIEFIASRYASELML*	common_virus_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0024	shell	direct	moderate	674	0.96	GCA_003351445.1_01393
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1391598	1392356	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	14599	15357	GCA_003351445_1_1_1346	GCA_003351445_1_1_1346	+	1860196	.	pfam13730	Helix-turn-helix domain. 	MSMRLMVQAMNCKVGNPARKLVLLKLADNANDDGICFPSYQYIADKCEMTRRSAINHIEYLIKMGLVSKKERKNKDGSISNLYFLHLEQGSENFALGSENISLGSENFALGGSENISPRTSHSLEPVNEPKKTTQKSEAEMLLEQFGITGQLAKDFIAHRKAKKGVINQTQLNRLQKQADKAGISICEAVEICIERNWQGFNASWDWRDEKLRPNSPHLGQSHRNKPKFDDTQTGWSAGMNFIVDGTQWQIP*	mmseqs_cdd	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0025	shell	direct	high	758	0.999	GCA_003351445.1_01394
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1392341	1392982	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	15342	15983	GCA_003351445_1_1_1347	GCA_003351445_1_1_1347	+	1860196	.	PFAM:PF06992.10	Replication-protein-P	MANSITQNQINTLPPERTQRAEETINWLFQELKSIFPGWRAAFETEADYLSAKKTWLRVLVREKITRPQLENGICEAEKSLDKFLPSVGLFVYWCKAYDYHALGLPNEAELYQRYNTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKAIPKLLTKAAEKVRSNFPFEDIPKMIPEKPSFYDKAKADKARDSLMAMMKGKGALQ*	rep_hall_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0026	shell	direct	high	641	0.998	GCA_003351445.1_01395
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1392979	1393203	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	15980	16204	GCA_003351445_1_1_1348	GCA_003351445_1_1_1348	+	1860196	.	.	hypothetical protein	MTSYKCPKCGAELEDFYTPDYFISSSEWDDDRFRCNGHLIEPIPFPQVSKYSAVNRTKSCGYFGLEDLGVEYKE*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0027	shell	direct	high	224	0.996	GCA_003351445.1_01396
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1393240	1393656	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	16241	16657	GCA_003351445_1_1_1349	GCA_003351445_1_1_1349	+	1860196	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPTDDKKPLVVKIQPITRNLEQNAKFHAMCQDVANQAEFMGRKLTMEQWKVLFISGHAIATNQKVDVVPGLEGEFVNIRESSAQMSVSRMASLIEYVTSWGVQNGVRFNDRWGL*	mmseqs_cdd	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0028	shell	direct	high	416	0.998	GCA_003351445.1_01397
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1393749	1394336	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	16750	17337	GCA_003351445_1_1_1350	GCA_003351445_1_1_1350	+	1860196	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKMCGNYFIKIVSSLQKVCSPECAIKLSREQTRKAREKKDKQARIENRKKMTALKEKNKTKHELTKEAQVAVNKYIRLRDVGKECISCGTPLVAEQLGGGFDAGHYRSRSAAPHLRFYTLNIHGQCKKCNRYYGGNVQQYRLGLLDRLGSEKVEQIEADNRPRHYSPDDLRRIKQIFNKKYRLIEKRKG*	common_virus_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0029	shell	direct	high	587	0.998	GCA_003351445.1_01398
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1394338	1394703	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	17339	17704	GCA_003351445_1_1_1351	GCA_003351445_1_1_1351	+	1860196	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MQTKHILDIKLTARRYGKWAREGVGINYPAIQPFLRKATPDHGIPMLDDETAMRIHDATLIMRNVTPELYQVFMLRYVSNLSQGNVGREMGVSVPMIKSYLYAAHQSLKLLLTQNKCIFLA*	phrogs_hmm	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0030	shell	direct	high	365	0.997	GCA_003351445.1_01399
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1394743	1395261	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	17744	18262	GCA_003351445_1_1_1352	GCA_003351445_1_1_1352	+	1860196	.	.	hypothetical protein	MFRLAKQQENRMITYAQLCEQNIRYQAMLHHNAQMLRTVINCFTIALEEDLGLTDKSYKKEFNQDQQVPYVDVLNIDDHKSCPWYQLKTEFEQNAPVIEFELALTLEKAPNVYPKTTLISPMRAIYINENSIQLEFTAHRDKPQFIISINEKDAFSHVINTYKQLILEMLKC*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0031	shell	direct	high	518	0.998	GCA_003351445.1_01400
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1395496	1396317	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	18497	19318	GCA_003351445_1_1_1353	GCA_003351445_1_1_1353	+	1860196	.	cd18722	LabA-like PIN domain of Pseudomonas putida S16 NicB and related proteins. Curiously NicB from Pseudomonas putida S16 is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine. This subfamily also includes the uncharacterized CPP15 (plasmid) protein from Campylobacter jejuni. This subfamily belongs to LabA-like PIN domain family which includes Synechococcus elongatus PCC 7942 LabA, human ZNF451, uncharacterized Bacillus subtilis YqxD and Escherichia coli YaiI, and the N-terminal domain of a well-conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. Curiously, a gene labeled NicB from Pseudomonas putida S16, which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like PIN family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	MKKTAILIDGGFFFAKVGFFARKFFKNKTITAENLIDLMWRMVRFHTEIERGQHSGREAQELYRIYYYDSPPLDKQVKLPFPEKGETTPRDKNFKTEAMNKLRAEFHVKLKENRKTALRMGRLQSTDWRLNEHTLKALRQGKKKWEDLTNDDWYYEITQKSVDVKLGMDITILSYEKLVDVIVLIAGDSDFVPAAKQARIKGVDFILNPLKQEISHDLAEHIDGIQSFSVGVGLAEILKCDPEGNPQWWQDYQAKAAANKEKRKAKKQTRKKK*	mmseqs_cdd	nonviral_gene	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0032	shell	direct	high	821	0.999	GCA_003351445.1_01401
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1396726	1397238	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	19727	20239	GCA_003351445_1_1_1354	GCA_003351445_1_1_1354	+	1860196	.	.	hypothetical protein	MSFELRKQLADLKAECDALFKQRLALLQGKKENAISLMTNEAIAFLQAKGFTVSNLIPDTIEANYKGSMNIRIQFSDPKDSFIGADITIDVDYLAQSFGFSVNLAREAFNGILSGDLVEEISQYQTRVEKLKSLSCSDIDGSFEITLIKQNLEKLTFSTITDTLKFVLEM*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0033	shell	direct	high	512	0.998	GCA_003351445.1_01402
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1397366	1397527	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	20367	20528	GCA_003351445_1_1_1355	GCA_003351445_1_1_1355	+	1860196	.	.	hypothetical protein	MIKYTPKHQVKVGGKMSEKAADKVGNKLANAALIITTCWGISAIIFAVAYFVK*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0034	shell	direct	high	161	0.994	GCA_003351445.1_01403
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1397512	1397634	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	20513	20635	GCA_003351445_1_1_1356	GCA_003351445_1_1_1356	-	1860196	.	.	hypothetical protein	MAKAQGIEPQLAVLETAVLPLDYALIDTLVTLPTRGYLTK*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0035	shell	ambiguous	low	17	0.138	GCA_003351445.1_01403
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1397698	1397949	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	20699	20950	GCA_003351445_1_1_1357	GCA_003351445_1_1_1357	+	1860196	.	PFAM:PF16082.4	holin	MLKDAGSQSIFWSGFGAFWAMYSFQEWLAIMGLVIGLISGLVNMYAKCQEGKVRKNEERRAEEIHRVKMKRLSLGFDDDFDKN*	phrogs_hmm	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0036	shell	direct	high	251	0.996	GCA_003351445.1_01405
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1397930	1398472	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	20931	21473	GCA_003351445_1_1_1358	GCA_003351445_1_1_1358	+	1860196	.	CDD:cd16901	P1-lysozyme	MILTKTRKALGVCSVITVMGLMYAQFGNELRLSPIGAEIIGNAEGCRRDPYQCPADVLTVGIGSTEYGGKKINPKHRYTDLEIAERWKNDIVIAERCVNKYGNGEMLPQSVFDSAVSITFNVGCGAVSKSTMFKYLRAKQYEKACGEFPRWVYASGKKLAGLVVRREKEKALCLADLKLP*	common_virus_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0037	shell	direct	high	542	0.998	GCA_003351445.1_01406
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1398445	1398780	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	21446	21781	GCA_003351445_1_1_1359	GCA_003351445_1_1_1359	+	1860196	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MFSRFETAIKLTALCLILGLCGWTWFQSQKISSLKAENQAQAQTIQQQENANKSLSLALQQERDAVIAQQERNDEIERVATENVESVNTIIKTQPCANTRLPQSVLDRLYK*	mmseqs_cdd	nonviral_gene	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0038	shell	direct	high	335	0.997	GCA_003351445.1_01407
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1398731	1398973	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	21732	21974	GCA_003351445_1_1_1360	GCA_003351445_1_1_1360	+	1860196	.	PDB:5CYB_A	Lipoprotein	MPTLVCLSLFLTACTNKITTKAEYIYPPQAYTVPCVKTAFTGETYGDVVIQLVKVTAERDKCASQVDHLNKWINQTKTAN*	common_virus_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0039	shell	ambiguous	low	51	0.21	GCA_003351445.1_01407
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1399244	1399717	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	22245	22718	GCA_003351445_1_1_1361	GCA_003351445_1_1_1361	+	1860196	.	pfam07278	Protein of unknown function (DUF1441). This family consists of several hypothetical Enterobacterial proteins of around 160 residues in length. The function of this family is unknown. However, it appears to be distantly related to other HTH families so may act as a transcriptional regulator.	MDNLYDLKLNINQIAELVGMHRQTVSQRLAGLTPAIGSNSKLKLYTLSDLIKIGLAEKMTANVDSLSPVERRAFWQAENERLKYERDTGELVPSFEVAQEMGFLAKAVVQSLDTLPDILERDCALTPTQLTRVIQVIDDVKSQMSLHIQAGDNKSEE*	mmseqs_cdd	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0040	shell	direct	high	473	0.998	GCA_003351445.1_01408
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1399720	1401840	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	22721	24841	GCA_003351445_1_1_1362	GCA_003351445_1_1_1362	+	1860196	.	CDD:COG5525	Large-Terminase	MFASAKDIRRDIANLLKPPRRMKVSEAVAEYMRVPVGGGNSVKWDKDTAAYMLDPMDCLNSREYDAVIFVGPARTGKTIGLIDGWITYAIICDPSDFLLVQLTQEKASEHSRKRLDRTFRCSPEIAKRLSPRKNDNNVHDKYFRAGNLLKIGWPSINVLSSSDYKYVALTDYDRWPDDVDGEGDGFSLASKRTTTFMSAGMTLVESSPGKDIVDIKHHPKTTHEAPPTTGILSLYNRGDRRRFYWQCPHCKEWFEPSMANMVGYRNDTDYVKASENARLQCPHCQSLVDPDKKRALNIGGKWLKEGQTIDKDGVIHGEGRNSRIASFWLEGPAAAYQTWAQLTYKLLTAEHEFEMTGSEETLKAVTNTDWGLPYLPRSALEQRRSDELMERREDTEKRTVPYGCRFLLAAVDVQGGRNRRFVVQIVGYGENSERWLIDRYNIKSSMRSNSEGESLPIDPSAYPEDWDLLISDVLNKQYRIEGLDGGVMPILAMAVDSGGEDGVTDNAYKFWRRCKRDGISKRVYLVKGDSTKRQKLISRTYPDNTSRSDRHAKARGDVPLYLLQTDQLKDRISNALSRETIGANYIHFPSWLGEWFFDELTYEERGQDGKWRKPGKGNNEAFDLFCYAHAIAILRGYERIKWGDEDNVPYWAKLPSVNPNVIRKESSAPEEAESAVEIEQVKPQPKPKPKSNWLNGGASKKKGGWL*	hallmark_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0041	shell	direct	high	2120	1.0	GCA_003351445.1_01409
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1401837	1402055	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	24838	25056	GCA_003351445_1_1_1363	GCA_003351445_1_1_1363	+	1860196	.	.	hypothetical protein	MIYDKDELEEKIRALDEKIENAQSQVSFNGRSVSYQVSEWTKQRDRYQQMLNELLAETRQRVKRHRIKYARF*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0042	shell	direct	high	218	0.995	GCA_003351445.1_01410
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1402059	1403582	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	25060	26583	GCA_003351445_1_1_1364	GCA_003351445_1_1_1364	+	1860196	.	CDD:COG5511	Major-Capsid-protein	MGILDKTIAAISPKWGAQRAKSRYVMNAYEAAMPSRTHKAKRESQGANVSTKQSAVSLREQARALDQNHDIVIGILDKMEERVIGSRGIHIEPQPMNLNGDVNETLAEQIRKKWAEWSVRPEVTGQFTRPELERMLLRTWLRDGEVFIQLVRGSVAGLNHSTKIAFSLEALEPDFVPMNTLDTANLIQGVELDAWRRPKSYRVYMDNPQENNRTYGRVKSVPAENMLHLAFKKRLHQLRGVSMLHGVIIRLADLKDYEESERVAARIAAAFTMYIKKGDAALYGDNEDYSADSPERDFEIAPGAIIDDLKPGEDIGLINSNRPNVNLETFRNGQLRATAAGTRSSYSSIARDYNGTYSSQRQELVESFEGYSVLQDTFVAHISRPIYREWLKMAIVSGEIDVPVDIDPASLYNAVYSGPVMPWIDPTKEAQAWKERIKGGLATESQAVRASGSNPAEVKRRRRVEVEENRKFGLKFDTDLTNTGTTNDKTKNDSVAGGDGNERDKDE*	hallmark_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0043	shell	direct	high	1523	0.999	GCA_003351445.1_01411
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1403554	1405560	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	26555	28561	GCA_003351445_1_1_1365	GCA_003351445_1_1_1365	+	1860196	.	PDB:6WKK_D	Major-Capsid-Protein	MATSATKTNNQSWYSIKAKANDTAEISIYDEIGFWGVSAASFAQDLKDCGNNIKQINLHIHSPGGDVFDGIAIYNLLKNHPANVTVYIDGLAASMASVIAMAGNEVIMPENAMMMIHKPWGIQGGDAEDMRKYADLLDKVENTLIPAYASKTGKTPEELAEMLSAETWLNGKECVEQGFADKLAEPLVAMASIKSRKLEDFENMPKAMKDMLFKPQGNAGASAPQATPTPAQPAPTEPVNQAPTAPVDNTAQVQAELNKRNADIKAVFAPFGTTHNDLLVECLGDLSITADQAKDKLLAKLGAGTTPSAAVTPYADNGNIVGDSVKQSLLARAGIDKDKVNAKDNAYNAMTLRELARASLVDRGISVSSQNAMSMVGLAFTHSSSDFGQILIDVAHKSLLKGWETAAENFDQFTSRGTLTDFRAAKRVGLGDFGYLPQVGEGEEYTYGTIGDEGASVALATYGQLFSITRQAIINDDMHLLTKIPEKMGQAARATIAKLVFALLTGNAIAQDGKALFDASHKNTLTGAALDVTNIDKAIQMMNGFVNTRGEPLAIEPDFMLLPTSLYTRAKQVLGSASVEGADINSGIINPIRDIVPTVKSARLQVADPKSWYLINKEAIEVSYLDGIDTPYMEQQQGFTVDGVSTKVRIDAGVNVIDYRGIVKVTNK*	hallmark_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0044	shell	direct	high	2006	1.0	GCA_003351445.1_01412
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1405639	1405962	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	28640	28963	GCA_003351445_1_1_1366	GCA_003351445_1_1_1366	+	1860196	.	COG5471	Predicted phage recombinase, RecA/RadA family [Mobilome: prophages, transposons]. 	MAKNYMQDGNTVRFTAAAAVKSGDVVMLENLAVIAVSHVAQNETGVGLTTGVFTVKAKAEDDIKQGAIVYWSATDGATITAGSNKRLGIAWHASGVSMGTVDVKINT*	mmseqs_cdd	nonviral_gene	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0045	shell	direct	high	323	0.997	GCA_003351445.1_01413
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1405913	1406254	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	28914	29255	GCA_003351445_1_1_1367	GCA_003351445_1_1_1367	+	1860196	.	pfam13856	ATP-binding sugar transporter from pro-phage. Members of this short family are putative ATP-binding sugar transporter-like protein.	MLVAYRWALSMSRSTLSPFDDALAQADKVISDVMMSVYVINGKKYKAVLDESPKLMSGNYTDDYLINGTTRTLTLFKASGYKPKLGDIIISSTEEYVVRGFSFEDGKIVLQLE*	mmseqs_cdd	nonviral_gene	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0046	shell	direct	moderate	311	0.909	GCA_003351445.1_01414
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1406257	1406787	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	29258	29788	GCA_003351445_1_1_1368	GCA_003351445_1_1_1368	+	1860196	.	PFAM:PF06763.10	minor-tail-protein	MAVKIEGMAALQANIQKLANQVVPKAAAKAINKVARSAIKNGTKNVSKEIHVPAKLIRKRTRLSQKATANRPVAKIRVDRRNLPLIRLLENPRRTMRASKGQIRIGKYQIQRGFIQTLANGRKHVMQRQGKERYSIDVVKIPLSRPLTTAFHNELKDYSSQIKVELTRELSDILKK*	hallmark_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0047	shell	direct	high	530	0.998	GCA_003351445.1_01415
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1406796	1407206	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	29797	30207	GCA_003351445_1_1_1369	GCA_003351445_1_1_1369	+	1860196	.	PFAM:PF06141.10	Minor-tail-protein	MLIHKKIRHQVSDILKSSIKGVENIYSGRPLFIDIDQEKTAIAVFLDEISCEEVDLCHHEYTAALNIAIYLKTALGDDALDDIADKIKERLSVAISNDELSENISEMTLISYEYEQDTTNRTWFVSNLKYQIKYED*	hallmark_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0048	shell	direct	high	410	0.998	GCA_003351445.1_01416
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1407209	1407859	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	30210	30860	GCA_003351445_1_1_1370	GCA_003351445_1_1_1370	+	1860196	.	PFAM:PF06199.10	major-tail-protein	MPTQTTPFQGTKFYLGTGLTEGKAVTAVTVKPNATITSAGHGAKVGDFIKLTGLGALDGYYPVKAVTNDLITLADEVDWTSQDAPASYAAVKVSTVKWSSNFCAIKQIEGDGDTLGEEDITTMCSEGTETEAGEIEYGSIKLTFFYAPATAMQADLRKKFYAKETFPWMMILKNAQGSLYGTGFIQTSPNFSGEVKGKFESGVTIKKAKRDYHLPA*	phrogs_hmm	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0049	shell	direct	high	650	0.998	GCA_003351445.1_01417
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1408018	1408134	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	31019	31135	GCA_003351445_1_1_1371	GCA_003351445_1_1_1371	+	1860196	.	.	hypothetical protein	MQYGLWETTLAYLVLGVCFIIAWRLPNIINSIKNKGDK*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0050	shell	direct	high	117	1.0	GCA_003351445.1_01418
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1408134	1408541	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	31135	31542	GCA_003351445_1_1_1372	GCA_003351445_1_1_1372	+	1860196	.	PFAM:PF16462.4	tail-assembly-chaperone	MNLREKLLANKPKITPIIINGENYYIREITVGEMNRVLYGQQQELVHIAESQGIELNFNDEKHLTEQLAKIYDPNRLTRTLAMRLCDQDGKNLFDMDNPDDLTALSKLDKVVFEQLTQAIVEDEPKNSQAEESSK*	phrogs_hmm	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0051	shell	direct	high	407	0.998	GCA_003351445.1_01419
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1408586	1408810	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	31587	31811	GCA_003351445_1_1_1373	GCA_003351445_1_1_1373	+	1860196	.	pfam13227	Protein of unknown function (DUF4035). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 67 and 93 amino acids in length.	MPERHLQEYEIFYQEQPFGLWREDYRTAQVSHLLAMINRDPKSKPPELSDFMPFYQEKMDDEDDDGVADYLANR*	mmseqs_cdd	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0052	shell	direct	high	224	0.996	GCA_003351445.1_01420
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1408879	1409262	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	31880	32263	GCA_003351445_1_1_1374	GCA_003351445_1_1_1374	+	1860196	.	PFAM:PF15781.4	toxin	MKQEWEVILQDPLLNWLETLAEDDVLKIYAALELLSTEGPQLSRPYADTLQGSKYTNLKELRVQSKLSVFRLFYIFDPVRQAIVLCGGDKKGKKEKLFYKEMIALAEQTYDDYLSELTKEQENEREI*	phrogs_hmm	nonviral_gene	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0053	shell	direct	high	383	0.997	GCA_003351445.1_01421
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1409246	1409548	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	32247	32549	GCA_003351445_1_1_1375	GCA_003351445_1_1_1375	+	1860196	.	pfam13744	Helix-turn-helix domain. Members of this family contains a DNA-binding helix-turn-helix domain.	MSVKFKDLMNNLPAEKQAKVKAMADDMRMELQLYRIREELELSQKQMAEALSISQPSVVALEKRGNDIKLSSVKRYIEAMGGVLNLSVELPTGKTVTFNL*	mmseqs_cdd	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0054	shell	direct	high	302	0.997	GCA_003351445.1_01422
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1409561	1409800	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	32562	32801	GCA_003351445_1_1_1376	GCA_003351445_1_1_1376	+	1860196	.	.	hypothetical protein	MLRDFIQFTAKCFFILLIALGTLFLLFAVDFIYILAFIGVYVAIFATCLVVAIIKENNRIKKLRIVEQDKNRVKYVIIN*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0055	shell	direct	high	239	0.996	GCA_003351445.1_01423
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1409852	1413196	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	32853	36197	GCA_003351445_1_1_1377	GCA_003351445_1_1_1377	+	1860196	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MSSLGSLNILLSLDSIQFNQALDKSSYQTQKFAKQFELNFTKAQAKAKQFSERTTQYLNNIEKAANTINKTTSRTFWAGIVSSGGSYLSSGISDVIKYADSYTELQNRIRLVTNSQTAMVAATESVFDISLKTNQAVGATAQIYQRFAQNADRLNLSQLQVSELTETVAKSVAISGASAGAAEAALMQFGQALGSAELRGDELNSVIEQTPGLADAIAKGLGTTTGELKNLAKAGKLDIHTVIQALVKARDTVDNDFNKRVKTLSMSFTNLETSITKFSGEANSALGVTQKLATGVDFVSDHLQELIIGLGSLTAALAIGHLSKYGLELLKTGYTSAKNALAHIAEAKAIAIKATAMRTAAQVEMASLNAQFKLAKSEQTRFALRERMKVQSAQIIALAQAEATAKRNLATATNIAAMAAKGLQSVMALLGGPAGVIGIAATSLIFFSSQAAEARQWALDTSIANRALAESYEQISEAALSVKITEQLEDIEKYYAEIEKLKASVKSKNINGDFDGFTVVNAQTEAEIKKVNDQIGTMTENADKAKQALEKMLSPLGEKMLRAGKSVDEVRQEFKLLGVSAETTDNIIANLPKSFNDTANSANKAADKTLDLKDAIDKLNGKSTTLAQKLEVAKLKQQGQAKSAYVLAGLYELLGKEGAEYNEVLIGIATGTITAANAADKAVGLSVETLKKILDGKAQLEQDFAKENEINKIETGLKESKGSKTDYVKQYTDQVSEMEKRLSELRANAQDIALFGQTSQYQEVNKLTQDIAANAEKYAHFGADGLAKLKDLAAQIDAAQQVVSINQFTFDNSEKLRAMEFELTLLGKTRQEQELMQYNHQLDLEAARLKIGMSQENIAKLDEEIAKLKERRGIIQQQAEESRGSAILGFQQGMKTIEDQVSDVAGNISNITVNAFNGMSDALTDFIMTGKTDFNSLAKSIIKDIVQMTTKMIIFASLKAAFGKFMGFSGGGLVPELKYTGGLVGFDEGGFTGIGGKYTPAGIVHKGEYVITKEATARLGRGFLDHLNYGSVRRGFANGGGVGVPRLPTMAYQPKSSGNIAVKVINNGEPMDATVSQQSRNGQLEITVELVRQIAQVEAGTMLQKNMRPGGLLS*	hallmark_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0056	cloud	direct	high	3344	1.0	GCA_003351445.1_01424
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1413205	1413537	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	36206	36538	GCA_003351445_1_1_1378	GCA_003351445_1_1_1378	+	1860196	.	PFAM:PF05939.12	minor-tail-protein	MALKTLSWCPQPKYTVEEEPRRKVLNFGDGYQQRMVDGLNPLLRKFNLTYKLNHKSAVEFDRFLTSHGGVTAFFFREYENGDLIKVVCPKWSKTVTKRHTEISCTFEEVV*	hallmark_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0057	shell	direct	high	332	0.997	GCA_003351445.1_01425
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1413619	1413774	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	36620	36775	GCA_003351445_1_1_1379	GCA_003351445_1_1_1379	+	1860196	.	.	hypothetical protein	MEQIIDNILPFFKELIMQYGLWEATFAVAFLIFIFAFTWKLPSIIKAIRWW*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0058	cloud	direct	high	155	0.994	GCA_003351445.1_01426
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1413910	1414023	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	36911	37024	GCA_003351445_1_1_1380	GCA_003351445_1_1_1380	+	1860196	.	.	hypothetical protein	MSEKDAGIAGKMLASAAIIAAVGFAIGAACFGISFIL*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0059	shell	direct	high	114	1.0	GCA_003351445.1_01427
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1414283	1414822	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	37284	37823	GCA_003351445_1_1_1381	GCA_003351445_1_1_1381	+	1860196	.	.	hypothetical protein	MKKLLLIGVMVAFLSGCAVPQQKKESLSEKWAKQDELALKGEITDETDKFTGEREIKWQVSGIVSSQYTQTIVPEKFSVIKNKKQYNELLITKKGRSPVKCDETHWLVDGKKFNLKPYNSGLTATRDFYLQLNIYRPTNAQLKQLANANQIDIKICNNEYSFTQNEINGLKELVKAAGL*	.	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0060	shell	direct	high	539	0.998	GCA_003351445.1_01428
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1415234	1416196	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	38235	39197	GCA_003351445_1_1_1382	GCA_003351445_1_1_1382	+	1860196	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MGIFNTIRRLTERFSNHLSAIKFEKVSVMTIQSQFSTFNFESNSIRTLVINNEPWFVAKDVCDTLKISNISDALLKLDDDEKATIGLTDSQAGNGAQSISIISESGMYTLILRCRDAVKKGSIPHRFRKWVTAEVLPTIRKTGKYESKTTVDDRTGLRNAVNMLVSKKGLIYSEAYHLVHQRFNVESIEDLTLEQLPEAVEYVHKIILERELITEAELPSREKKFSFEFTEYELQQLIWLWFAFKRGVGTFQHIERAFNVLGSNMSGQIYGQAYEYLSVLRSTNKILNRITQEFEIDPMTNWRALEHLRKFDQKAVKIDF*	common_virus_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0061	cloud	direct	moderate	878	0.912	GCA_003351445.1_01430
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1416437	1417087	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	39438	40088	GCA_003351445_1_1_1383	GCA_003351445_1_1_1383	+	1860196	.	PFAM:PF05100.11	minor-tail-protein-	MSIYGQLQQYASHGWIELFELDLTKFGDMVYRFHDGLSPLGQAIVWQGLEYTPYPVKAEGFAVDGLNPVRPRITFSNLGGAITLVLAKLKGIEGARLTRKRTKIIYLDAVNFENGNLTADPNAHLPDDIFYISQKTSEDHLTVSFELLPATDLEGVKLPRRQIVAQYCTHKYKGQFCGYTGDKATCAKTLADCKAHFGEHSELPFGGFPSAAYMRI*	hallmark_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0062	shell	direct	high	650	0.998	GCA_003351445.1_01432
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1417089	1417796	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	40090	40797	GCA_003351445_1_1_1384	GCA_003351445_1_1_1384	+	1860196	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MKHIDDAIAHAKQSYPHESCGFFVLKNGKLQYVACTNLAAETEDEFLIGIEDYARAEGVGEIRTVVHSHPDESCLPSIADQDAHKISGLEWCIIGLEGDEVSTHFMPALTEVPDLYGRKFIHGMTDCYGFVRDWYRQELGINLPNYNRIDGWWDNGGNLYVDNFEDAGFYPVKDLKIGDMIVMQINANVPNHAGVYLGDGLIGHHLYGRLSSKDVYGQFYRERTTHIMRHKENTP*	mmseqs_cdd	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0063	shell	direct	high	707	0.999	GCA_003351445.1_01433
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1417735	1418454	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	40736	41455	GCA_003351445_1_1_1385	GCA_003351445_1_1_1385	+	1860196	.	PFAM:PF06805.11	tail-assembly-protein-I	MDNSTANEQRTSCDIRKIRLKGELGKRFGKVHKLAVKTPAEAIRALCVLKRGFKEFLLESEKHGIVYRFLVQREELTTSSDEFQMRYGAQAEFHLIPVIRGSKRGGFFQLIAGAAMIGLAFWNPLGWATIGGTGFLSSVATLPLTIGASLVLGGISQLLVPVPKVSGPQERPENKPSYLFNGAVNTTEQGQPIPLLYGELIVGSAVVSAGLTDKEIPIRTNSTSNNETRGKLKFKRVSG*	hallmark_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0064	shell	direct	high	719	0.999	GCA_003351445.1_01434
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1418458	1422108	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	41459	45109	GCA_003351445_1_1_1386	GCA_003351445_1_1_1386	+	1860196	.	PFAM:PF13550.5	tail-protein	MQIVGRKGGGKGGGGGGRAPVEAPDSLKSCSYAKFIDVISCGEIEGPVNGLNSVYFGDVQLQDEKGKFNFNNVAIEWRPGSVRQAPSEICQTNEVTTDVNTEVKKDKPITRSIIAPEADIVRVTITVPGLSHQNKSNGDINGTKVELKVEYQANGSQWIDAGNIVIEGKTASSYNREHSFRLTGEAPWNIKVTRLTDDSDSQVLQNKTIFSKITTVFEEKLTYPGVAYVGVQIDAEQFSSIPSRGYHCRGIKLKVPSNYNPETREYSGDWDGTFIVKYSNNPVWIYFDLLTNEEYGAGEYIKEDMLDKWSMYQIAKYCDELVPDGFGGREPRFTCNVYIQTKQEAFKLLRDLTSVFRAMSYWSSGTQMLVQDSPKEPIYQFNNTNVIGGKFSRSGSNIKTRHNVVLVTWNDPKKYFKQSVEYIEDSEAIVKMGYISQTEVVAFGCTSRGQARRLGKWLLYTEQYESEVITFSCGQDGAIPIPGEVIQVSDVHRSGERRGGRVKDGSTTNRIILDAEVEITKESTISIVNEKGELEQRAITQRGKLTEIDVRPVFTSVTENSTWIIASSDIKPEFYRVISIVESDDGSYTITASDYNPSKFEHIENGNELIEYDTTNNTLDTGVKNVVITDEIYRGLGGSIQTKIVVSYEPATSLTSRYQIEYREGNGNWKQMEPTTLTSVDIPNVKDGVLYQIRIKTSNVLGVWSDNPIQNYEPIGRLRPPHNVSNLRNKAIAQEGAFLIWDLSPDIDLEYYEIKKGDTYESSKPIGKIKANEFNLGFIRTGEHKYWLSAVDSSDVRSESPTAVTFNISGGQVENLVAEIVGDEVLMTWGETKNNSFSTELYEVKKDDDVLALVKSTSFKFKADFNGNKKFTVTAIDLGGNRSESAQAQLIVHRPTPVSISQQVIDNYVMLRWQSAKATLPIVYYELRKGETIENSEFITNIDGLAFPQFETVGGLYKYWIIGVDSAGNRSEPQYTLSNVAQPPDYILKYDYNSSYDGIKNGSDKIDGKLYLPVRRDTWAEHFRSNNLATPKSQINRGFPLYLQPIDESGYYEEEMDYGTVLASSKITLTPKVISSGSYDINYHIAVKENAKDNWREHDQQSVYETNFRYVKFRITVSNAQKPVVIESLNLKLDQKQKTDGGTVQANASDIKGTWVNFATEFIDASVPVLTPQSKQPLFATSDFKDEPKPKGFYVFLFDKNGNRVSGKVGWVVKGV*	hallmark_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0065	shell	direct	high	3650	1.0	GCA_003351445.1_01435
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1422119	1423927	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	45120	46928	GCA_003351445_1_1_1387	GCA_003351445_1_1_1387	+	1860196	.	CDD:pfam07484	Tail-Collar-Domain	MADFNKPTVDSEYTQFPTEIRAAISAALSFLDGEHTNVPLKAKRWNPSTKIFEEYNGAQWVPMATEYKLPVDYNSLKNKPLPNSAVDDESDTKFASSAAVKTAYDKATEAKEAASAKQSPATTLAGYGIGNFKVEQGQGDANGYKTDGNYYLASGQNLPENGEWHIEVVSGGATNAVRQIARKANDNKIKTRFFNGSNWSEWKDAGGDGVPIGAVVSFPRSVTNPVGFLRADGLTFSQQSFPDLYRTLGDSNQLPDLTRSDVGMTAYFAVDNIPTGWIAFDSIRSTVTQQNYPELYRHLVGKYGSLSNVPLAEDRFIRNTGNGLNIGQTQSDEIKKHVHKVRTHWVNSSDSNVFYDKTKTVIDSRLRSATVTDDNLGDNGFMHPLLDSPMATGGAETRPRAIALKLCIKAKNTFDDVQFWVKAFGVVENAGILDAGTLVQNMQALSARVEQKIKENKQSTLLEINNAKADINQKFLQAQESLSQISTLKTVWQGNVSSGRIDISEKCFGKTLILYLQSSESHSLDDNNNIEPVSFEVGAEIEGKRGGGVYFSSIRQVIPHNSGGTRVYHVEVKKFAVTVDRNGTTIHIEELAGRFVKRIDIR*	common_virus_hmm	common_virus	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0066	shell	direct	high	1808	0.999	GCA_003351445.1_01436
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1423939	1424538	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	46940	47539	GCA_003351445_1_1_1388	GCA_003351445_1_1_1388	+	1860196	.	PFAM:PF14301.5	tail-fiber-assembly-protein	MKVYFLKENLNSYQIFPIPQNLNDFVEMEVENESELETKQLIDFKSQYILVDRQPTELHIWNGNSWVIDEEKQTEIKRELIKRLVDSIDDTAASISAKWTRFAEEYKERESAALAFKEANFTGEVSIYISSFATVAGLDNKSATLLILKQAEGLRTLQEQLAVQRMRKYELKHEELSEEELQQIHNDIIRKMKALTEVQ*	phrogs_hmm	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0067	shell	direct	high	599	0.998	GCA_003351445.1_01437
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1424538	1424996	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	47539	47997	GCA_003351445_1_1_1389	GCA_003351445_1_1_1389	+	1860196	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MTEGKVYLALYKGKKTGWTPKAILARLSDWLTRKLTKGLYSHCEIVVNKGFKVCYSSSIRDGGVRSKIMYLEHEKWDLIELQNITEERIKAYFEQTKNMRYDWWGALGIVLGIKQKRSKYFCSEWCFNAICGGENGWRFSPNQLGAMFKHDD*	phrogs_hmm	hypothetical_protein	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0068	shell	direct	high	458	0.998	GCA_003351445.1_01438
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	CDS	1425645	1426370	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	48646	49371	GCA_003351445_1_1_1390	GCA_003351445_1_1_1390	+	1860196	.	TIGR00050	RNA methyltransferase, TrmH family, group 1. This is part of the trmH (spoU) family of S-adenosyl-L-methionine (AdoMet)-dependent methyltransferases, and is now characterized, in E. coli, as a tRNA:Cm32/Um32 methyltransferase. It may be named TrMet(Xm32), or TrmJ, according to the nomenclature style chosen [Protein synthesis, tRNA and rRNA base modification]	MLENIRIVLIETSHSGNIGSAARAMKTMGLTQLCLVSPKSVDEQSYALSAGAENIVKNARVVDSFDEAVDDCSLVIGTSARLRHLQNTLIEPRECAEKVVAYKGKIAIVFGRERIGLTNEELLKCHYHLNIPANPDYSSLNLAMAVQLVSYELRMAFLVQNNKKNSLSLIEKNYPTTDQLAYFFDYTERIYQSLGFIQNQGVMRKLKRLYYRAKLEKNELNILNGMLSAVEKRIDLTKENN*	mmseqs_cdd	nonviral_gene	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_CDS_0069	persistent	direct	high	725	0.999	GCA_003351445.1_01439
GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote	cenote	tRNA	308563	308645	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C17	23702	23784	tRNA-Leu	tRNA-Leu	-	1860196	.	tRNAscan-SE score: 61.6	Leu	NA	tRNAscan-SE	.	C17	23976	284862	308838	GCA_003351445.1|CP031242.1@region_284863_308838@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	tRNA	1377616	1377691	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	617	692	tRNA-Lys	tRNA-Lys	+	1860196	.	tRNAscan-SE score: 87.4	Lys	NA	tRNAscan-SE	.	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	tRNA	1377715	1377790	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	716	791	tRNA-Lys	tRNA-Lys	+	1860196	.	tRNAscan-SE score: 71.8	Lys	NA	tRNAscan-SE	.	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	tRNA	1397563	1397633	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	20564	20634	tRNA-Trp	tRNA-Trp	+	1860196	.	tRNAscan-SE score: 47.0	Trp	NA	tRNAscan-SE	.	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_tRNA_0003	.	.	.	.	.	.
GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote	cenote	tRNA	1425472	1425534	GCA_003351445.1	CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445.1_CP031242.1	GCA_003351445.1|CP031242.1	GCA_003351445_1_1	GCA_003351445_1_1@C73	48473	48535	tRNA-Undet	tRNA-Undet	+	1860196	.	tRNAscan-SE score: 23.9	Undet	NA	tRNAscan-SE	.	C73	49371	1377000	1426371	GCA_003351445.1|CP031242.1@region_1377001_1426371@tool_cenote_tRNA_0004	.	.	.	.	.	.