core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote	cenote	CDS	331010	332416	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C17	1	1407	GCA_003351465_1_1_318	GCA_003351465_1_1_318	-	1816295	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MASQPQIKSLDKKTAQVSIPPHSTEAEQAVLGGIMLSNQHWDGIAERVIADDFYTFQHRLIFTEMEHLMRNQSPIDLITLDQALRSRGVSDEVGGFAYLAELSNNTPNAINILAYADIVREKAILRELISVGNRIAENSYSPKGQDIKLILDEAEREVFAIAEKRTTSSEGPQNVINVLESTIEKIDILSKLENHSGVTGVTTGFTDLDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAAMASEKPVLVFSLEMPAEQIMMRMIASLARVDQTKIRTGQNLDEIEWNKIASVVGMFKQKNNLFIDDSSGLTPTDVRSRARRVYRENGGLSMIMVDYLQLMRAPAFSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRTLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSEDKGVAEIIIGKQRNGPIGRVRLKFNGQFSRFDNLAEQREYRDDY*	rep_hall_hmm	common_virus	C17	6390	331010	337400	GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote_CDS_0001	persistent	direct	high	1406	0.999	GCA_003351465.1_00320
GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote	cenote	CDS	332558	333994	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C17	1549	2985	GCA_003351465_1_1_319	GCA_003351465_1_1_319	-	1816295	.	PRK05826	pyruvate kinase; Provisional	MSRRLRRTKIVCTMGPSTDRDNNLEKIIAAGANVVRMNFSHGTPDDHIGRAERVRSIAKKLGKTVAILGDLQGPKIRVSTFKDGKIFLNIGDKFILDAELPKGEGTQESVGLDYKTLPQDVVPGDILLLDDGRVQLKVLSTDGAKVFTEVTVGGPLSNNKGINKLGGGLSADALTEKDKADIITAARIGVDFLAVSFPRSSADLNYARELAQQAGLNAKIVAKVERAETVANDEAMDDIILASDVIMVARGDLGVEIGDPELVGVQKKLIRRSRQLNRAVITATQMMESMISNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMASVCLGAEKMPSINVSRHRMDKEFETIEESVAMSAMYAANHMKGVAAIVTLSSTGRTPLLMSRISSGLPIFALSRNQETLNLCALYRGVTPIYHGEESRTEAGAKAALQSLKEKGYLSTGDLVLVTQGGQGATQTNVCRTLIVE*	mmseqs_cdd	nonviral_gene	C17	6390	331010	337400	GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote_CDS_0002	persistent	direct	high	1436	0.999	GCA_003351465.1_00321
GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote	cenote	CDS	334509	334826	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C17	3500	3817	GCA_003351465_1_1_320	GCA_003351465_1_1_320	+	1816295	.	PDB:1Z19_B	Integrase	MATIIKNGKRWHAQVRKFGVSKSAIFLTQADAKKWAEMLEKQIESEKYNEIPDITLDELIDKYLKEVTVTKCGKREECIRLLRLSRTPLAAISLQEIGKAHFREW*	common_virus_hmm	common_virus	C17	6390	331010	337400	GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote_CDS_0003	shell	direct	high	317	0.997	GCA_003351465.1_00324
GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote	cenote	CDS	334863	335096	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C17	3854	4087	GCA_003351465_1_1_321	GCA_003351465_1_1_321	+	1816295	.	.	hypothetical protein	MRERSSLSALMAKTIEWDFITENPLKYLEKPKAPAPRTRRYNEHEIERLIFVSGYDVEHIEPPKTLQNCTGRHFFLL*	.	hypothetical_protein	C17	6390	331010	337400	GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote_CDS_0004	.	unmatched_CDS	none	0	0	.
GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote	cenote	CDS	335105	335509	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C17	4096	4500	GCA_003351465_1_1_322	GCA_003351465_1_1_322	+	1816295	.	PDB:1Z19_B	Integrase	MRAGEIASLTWNNINFEKRTAFLPITKNGHSSTVPLSVKAIAILQHLTSVKTESDPRVFQMETRQLDHNFRKLKKMAGLENANLHFHDTRREALTRLAEKVDVMVLAKISGHRDLSILQNTYYAPDMAEIAQRL*	common_virus_hmm	common_virus	C17	6390	331010	337400	GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote_CDS_0005	shell	direct	high	404	0.998	GCA_003351465.1_00325
GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote	cenote	CDS	335569	335727	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C17	4560	4718	GCA_003351465_1_1_323	GCA_003351465_1_1_323	-	1816295	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MADLQQLVKNIEQWAEDRNLIEGSTPQKQFIKLMEEFGELCSGVAKFILFET*	phrogs_hmm	common_virus	C17	6390	331010	337400	GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote_CDS_0006	shell	direct	high	158	0.994	GCA_003351465.1_00326
GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote	cenote	CDS	335772	336143	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C17	4763	5134	GCA_003351465_1_1_324	GCA_003351465_1_1_324	+	1816295	.	PDB:5NGD_B	Portal-Protein	MVDWCEKSIARLILGQTLTSGADGKSSTNALGNVHNEVRRDLMISDAKQIVQTITQQIILPYLQINVDPNIAPHRIPYFEFDTKEYEDLSVFADAIPKLTGIGVQISESWVRDKLGIPEPQEG*	hallmark_hmm	common_virus	C17	6390	331010	337400	GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote_CDS_0007	shell	direct	high	371	0.997	GCA_003351465.1_00327
GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote	cenote	CDS	336155	336847	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C17	5146	5838	GCA_003351465_1_1_325	GCA_003351465_1_1_325	+	1816295	.	PFAM:PF06152.10	minor-head-protein-and-DNA-pilot	MKRRGIDKPDDSSEFLVEVERPADKQGNREKTVGFKLPDGTIRVTDKGFDYNVGRLNYKPNLDLYPEKLAHAFAKVEMKGGEFKHDFELLAKHVAEMKQTLSPDGKKLTAEQMLQVRDSLTKNFKFAAGVLSAESKDLLKSKTGTVWLSDDTLIKQFNSRDGQDFGIDEYEALPDIINSPEHLLQVKDFTERYTFIRQGKMLVVKILPKEIFVLSFRLVSDKQWRKAFKE*	phrogs_hmm	hypothetical_protein	C17	6390	331010	337400	GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote_CDS_0008	shell	direct	high	692	0.999	GCA_003351465.1_00328
GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote	cenote	CDS	336983	337399	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C17	5974	6390	GCA_003351465_1_1_326	GCA_003351465_1_1_326	+	1816295	.	CDD:TIGR01635	phage-virion-morphogenesis-protein	MIDIEINNAQEVTALLERLAQATAHRAPLMRSIAGTMESAVLQNFDVGGRPKWLGLKYRQGTPLVDTENLMASITSEYNNNEAIVGTNEPYAAIHQFGGKAGRGRKVAIPARPFLILTPQDEADILEDIQDYFQRLIK*	hallmark_hmm	common_virus	C17	6390	331010	337400	GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote_CDS_0009	shell	direct	high	416	0.998	GCA_003351465.1_00329
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	447842	448861	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	1	1020	GCA_003351465_1_1_420	GCA_003351465_1_1_420	-	1816295	.	TIGR01036	dihydroorotate dehydrogenase, subfamily 2. This model describes enzyme protein dihydroorotate dehydrogenase exclusively for subfamily 2. It includes members from bacteria, yeast, plants etc. The subfamilies 1 and 2 share extensive homology, particularly toward the C-terminus. This subfamily has a longer N-terminal region. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]	MYQLFRHGIFQMDAEKAHDFTIQCLKLASNPLFQPILKSLIHAPKGFPKTVMGVNFPNPIGLAAGADKNGDAIEGFGALGFGFLELGTVTPVAQDGNAKPRQFRLIEAEGIINRNGFNNNGIDYLIENVKNARYKSVIGINIGKNKFTPLEQGKDDYIFCLNKAYNYAGYITVNISSPNTPDLRQLQYGDYFDDLLRSIKDRQAILANQYNKYVPIAVKIAPDLTESELVQIADTLVRHKMDGVIATNTTISRDTVMGMKNAEQQGGLSGKPLQHKSTEIIKRLHQELKGQIPIIGSGGIDGLKNAQEKIEAGAELLQVYSGLIYHGPKLVKELVKNIK*	mmseqs_cdd	nonviral_gene	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0001	persistent	direct	high	1019	0.999	GCA_003351465.1_00421
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	449092	449730	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	1251	1889	GCA_003351465_1_1_421	GCA_003351465_1_1_421	-	1816295	.	pfam03406	Phage tail fibre repeat. This repeat is found in the tail fibers of phage. For example protein K. The repeats are about 40 residues long.	MKAFLHHLQNEAKLIISPTYCVDGEFALNEIARATLQQYGIVQLSSATNSDSETEAATSKAVKTAYDKAVEAKTTSDGKVGLNGNESINGEKTFENRIVAKTNIRISDIQHYASRGDYLNIGANNGDCWFEYKSSNREIGTLRMHANGDLTYKRQKIYHAGAKPQFNTDIEGKPNTLAGYGIGNFKVEEFRGNLNELLTALEQEIEQWQFPT*	mmseqs_cdd	common_virus	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0002	shell	direct	moderate	600	0.939	GCA_003351465.1_00422
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	449763	450218	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	1922	2377	GCA_003351465_1_1_422	GCA_003351465_1_1_422	-	1816295	.	pfam11041	Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	MSYAYEQAPARAGEVGKHVGQFRVINGYQLRKFFGFRNSSNALGFSQKRLGGAQWYRKRDQLSDSVKLSDDDYRFLIKCRILKNYQIGTLPNLIEACLFIFGEGCHIVDNYDMTVSISVPSASTSDFKKFAINHLDILPRQAGVQYLFNLT*	mmseqs_cdd	common_virus	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0003	shell	direct	high	455	0.998	GCA_003351465.1_00424
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	450231	451331	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	2390	3490	GCA_003351465_1_1_423	GCA_003351465_1_1_423	-	1816295	.	PFAM:PF09979.8	head-maturation-protease	MKFTDKTTQAATQRTITKDGFLVVPATISKVGVFDYLATELGLKEDGIKKVARTEKSLFSDATIKSFENATLTVGHPKDGVNAKNWKQLSVGVVRNVKRVGDELTAEAWIYDEQAIKTVQEHGVEQLSCGYDCDIKPSTVQDADFEMSPMIGNHVAIVAKGRCGGGVKLADEDKTIMGKTAKILDAFLGAFGIKLSDEQKKQIEDEEKSGSEEGKEPKGKQPTEPKEKQSEPENKKEDDVEKEELEKRLKAKDEEIQQLKDAQAKRDAEVKQAAVLADAKTAFKEVNFADNATVREIQESAVVAQGIFTKDEAAKLSDEEISGAYQTAKAVVAKLADERKSLGSILLGDAESKAAPKIDFNKTYNS*	phrogs_hmm	nonviral_gene	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0004	shell	direct	high	1100	0.999	GCA_003351465.1_00425
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	451472	452653	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	3631	4812	GCA_003351465_1_1_424	GCA_003351465_1_1_424	-	1816295	.	PFAM:PF04233.13	Minor-capsid-component	MTDDVERAMQQPQGSFFMDDAKGFQAISAKALMKVLEKYEKSDRTSQAENIANGFVGRGDAQNHAEVSTNLKNQTGIDLSAYLRNSPNIAERVNALTAGNIQLIKSIRSQYLDKVQNTVMQAMVRGSLNKDLSAQIKDLGKTTEKRAMFIARDQSSKLNAALTQARHEEVGIKKYMWSASLDERVRESHAEKDGQIFEYANPPVDTGHPGHDFNCRCVQIPVFDDVVNLKSEETELSYQATEPNKIGKMDLDELFESSIGGGGNKSFSNFGGVNSELIALAKESIGLDITDWQHSIDESSIRHILKQHGNEKAENKRGQRAVTKKDILLLPLVVSAFDSIEYTGTSDSGNETFLIKKEIDDEIFSVQEVRKRHKKIAVKTMWIKRKKKATSTT*	hallmark_hmm	common_virus	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0005	shell	direct	high	1181	0.999	GCA_003351465.1_00426
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	452682	454013	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	4841	6172	GCA_003351465_1_1_425	GCA_003351465_1_1_425	-	1816295	.	PDB:8HDS_J	Portal-Protein	MNILDGIKSLALKLGSKQDQTYYARGLSLTDDLMQIEALWRDNWIANKVCIKRSEDMVRNWRDIFSNDLKSEQLDEFTKLERRLKLRETLTKALQWSSLYGAVGLVVTDIINITSPLQPTERLKRLIILPKWKISPTGQRDDDVFSPNFGRYSEYTITGGTQSVSVHHSRLLIINANDAPLSDNDIWGVSDLEKIIDVLKRFDSASANVGDLIFESKIDIFKIAGLSDKISAGLENDVAHVISAVQSIKSATNSLLLDAENEYDRKELSFGGLKDLLTEFRNAVAGAADMPVTILFGQSVSGLASGDEDIQNYHESIHRLQEARLRPIFEVIDPMICNELFDGNPADWWFEFMPLTTVKQEQQINMLNTFATATNTLIQNGVLNEYQIANELRESGLFANISAEDIEEMKNVNEFAGNFEEPENTEDAQVQASEDEQENGALV*	hallmark_hmm	common_virus	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0006	shell	direct	high	1331	0.999	GCA_003351465.1_00427
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	454015	455475	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	6174	7634	GCA_003351465_1_1_426	GCA_003351465_1_1_426	-	1816295	.	PDB:8DGC_F	Large-Terminase	MNLNSLKNYSPKEILSKIRIEKAKKSLMHFTTQTKPDFVTGWFNILIAKELQQFYQDVIDGKQPRLMIFAPPRSGKSELFSRRFPAWAFGKKPDLQMIACSYSADLASRMNRDVQRIMDDDSYHDIFPESSLNDKRIATVSGQPLRNSEIFEIAEHKGAYRSAGVCGGITGMGADIAIIDDPVKDAKEANSQTVRDGVWDWYTTTLYTRLSPKSGVLLGMTRWHEDDLAGRLIEEMKNGGDQWRIVKFPAIAEEDEEFRKEGEPHPERFDLERLSKIRKAVGSQAWNALYQQRPSNKGGGIIKGSWFGRYKIPPLIKVKAIYADTAQKIKQHNDYSVFIVAGRGSDRKVYILDLVRGKWEAPELEQTLKDVWAKHKARKDTGILTRANVEDKASGTGLIQAIRRNNQIPISPIQVDADKYTRVLGVQGYIESGYVMIPENAPWVADFISECEAFTATDSHAHDDQVDALVMAITDILGKPKSLLDL*	hallmark_hmm	common_virus	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0007	shell	direct	high	1460	0.999	GCA_003351465.1_00428
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	455414	455986	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	7573	8145	GCA_003351465_1_1_427	GCA_003351465_1_1_427	-	1816295	.	PFAM:PF03592.15	Terminase-small-subunit	MSDVKGKSTSGRGLTPKQEKFCQLYIELGNASEAYRQSYDCSKMTTEVINVKASELLNKNGKITVRVEELRQAHQQRHNLTLDNIIADLQEYRDICMGRKPLTITTVVKNAQEGTAQSVNTECFVFEPTGANKALELLGKHLGMFTQKMELSGDLHIEQRAELNLSGLSIDELEQLEKLLAKGNPEQDSD*	hallmark_hmm	common_virus	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0008	shell	direct	high	572	0.998	GCA_003351465.1_00429
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	455996	456517	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	8155	8676	GCA_003351465_1_1_428	GCA_003351465_1_1_428	-	1816295	.	TIGR02681	phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein. [Mobile and extrachromosomal element functions, Prophage functions]	MNLQKIENFEQFLKVNDKQRIVTNSRHIATVFGKRHDNIIRDIKALVIEQDCGEFALLNFEETSYFDEWGRKQPMYQMTKNGFLLLVMGYRTQKAMKFKVEFIKAFDFMREKLQQEGYSLMHKYNELCIEHKAKKAFASLCGKGLREWKGDKPVLEATLKLFGDKMQIELPIK*	mmseqs_cdd	nonviral_gene	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0009	cloud	direct	high	521	0.998	GCA_003351465.1_00430
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	456838	457143	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	8997	9302	GCA_003351465_1_1_429	GCA_003351465_1_1_429	-	1816295	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MALAGVVVVLIGALRYQSSVIDELNITTKQQAQTIQQQENANKALTIALQQERDAVIEQQERNDEIERMATENAESVKTIIKTQPCAHTRLPQSVLDRLYK*	mmseqs_cdd	nonviral_gene	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0010	shell	direct	high	305	0.997	GCA_003351465.1_00431
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	457154	457756	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	9313	9915	GCA_003351465_1_1_430	GCA_003351465_1_1_430	-	1816295	.	PDB:3WH1_A	Chitinase-	MTMMISEETFNKIFPHAVKGVYQAISTQIEKAGCVNKIQQAMFLAQCGHESGGFTRFKENLNYSWLGLSKTFRKYFPDPLTAKRYERKPELIANRVYANRLGNGDEKSGDGWKYRGRGLIQITGKDNYAAFRKWLGRDIEPEDVAGNLDLSVKTAVWYWKCYELAELNSVEKVTRRINGGLNGIDERCKLYRALMVTDND*	common_virus_hmm	common_virus	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0011	shell	direct	high	602	0.998	GCA_003351465.1_00432
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	457725	458081	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	9884	10240	GCA_003351465_1_1_431	GCA_003351465_1_1_431	-	1816295	.	TIGR01594	phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]	MPIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPAIRYVLIDAAMCASIAGVAVPICTHLFGHTEYSSFLGTMIGFVGTEKIREFLFKFINRRIEKDDNDDFRRDI*	mmseqs_cdd	nonviral_gene	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0012	shell	direct	high	356	0.997	GCA_003351465.1_00433
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	458277	458450	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	10436	10609	GCA_003351465_1_1_432	GCA_003351465_1_1_432	-	1816295	.	.	hypothetical protein	MIKYNRTKLKIHPKEGLNMETYSTPVIRGAIAFAIVALAVGICLLFATPFISAVRWW*	.	hypothetical_protein	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0013	cloud	direct	high	173	0.994	GCA_003351465.1_00435
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	458836	459639	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	10995	11798	GCA_003351465_1_1_433	GCA_003351465_1_1_433	-	1816295	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MTDGARNTIPKGNNSARLFTGFEPLVAQLWVNYQSSQKGINSMNTQIQFSAFTFKSNSVRVITDKNQEPWFCANDVCDILGYSNSRDAISKHCKTGGVAKRDTPTKSAVQEMTFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQLALPEPEKKFTREFTEHDLQQLVWAWFALLRGTELCQVLHPALKQIGSHYAASVHDIAYEYRSNLRQAHNVLTRITEQFECEQGNNWRVLKYLRAYNPKATGFQLEIL*	common_virus_hmm	common_virus	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0014	shell	direct	moderate	678	0.843	GCA_003351465.1_00437
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	460079	460264	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	12238	12423	GCA_003351465_1_1_434	GCA_003351465_1_1_434	+	1816295	.	PFAM:PF16777.4	transcriptional-regulator	MAMTRAEINAKSDKKRGVRLQSYKLHEDIIKLLAELSEKTGKSKTAIVTEGILAMEKTYKN*	phrogs_hmm	hypothetical_protein	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0015	shell	direct	high	185	0.995	GCA_003351465.1_00439
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	460322	460693	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	12481	12852	GCA_003351465_1_1_435	GCA_003351465_1_1_435	-	1816295	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MNIDVISVEFGYWATPRYETEFPRVAAGFAEMKCDACYAEKYRMRPISDELGMEIDGYLGVIRKVTPELYDVFVLTYIKRWEKQEIWRYLHISRREYFNRLKTVKTSLLLLLSTEGKQCLFIA*	phrogs_hmm	hypothetical_protein	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0016	shell	direct	high	371	0.997	GCA_003351465.1_00440
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	460690	461232	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	12849	13391	GCA_003351465_1_1_436	GCA_003351465_1_1_436	-	1816295	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKVCGKAFVKTFSSTQKVCSPECAIKLARDNAKKAQERAEKKKQRERKAKLKSRSEWLKEAQAAFNKFIRLRDKDQPCISCGRYHQGKYDAGHYRSVGACPELRFCEINCFKQCVPCNQHKSGNVIEYRINLVKRIGEDKVAWLECQDHDPKKYTIEDCKAIIKYYKAKIKELT*	common_virus_hmm	common_virus	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0017	shell	direct	high	542	0.998	GCA_003351465.1_00441
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	461321	461512	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	13480	13671	GCA_003351465_1_1_437	GCA_003351465_1_1_437	-	1816295	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MVSAHKIATGGQAEMVIGLEGEVINLRESTAQMGVKRLASLIEYIQSWGVQNGVRFNDRWGFK*	mmseqs_cdd	common_virus	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0018	shell	direct	high	191	0.995	GCA_003351465.1_00443
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	461776	462000	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	13935	14159	GCA_003351465_1_1_438	GCA_003351465_1_1_438	-	1816295	.	.	hypothetical protein	MTSYKCPKCGAELEDFYTPDYFISSSEWDDDRFRCNGHLIEPIPFPQVSKYSAVNRTKSCGYFGLEDLGVEYKE*	.	hypothetical_protein	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0019	shell	direct	high	224	0.996	GCA_003351465.1_00444
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	461997	462617	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	14156	14776	GCA_003351465_1_1_439	GCA_003351465_1_1_439	-	1816295	.	PFAM:PF06992.10	Replication-protein-P	MNQLTNQSLHQGVSAQVEKFIDTLFDQLCASCPQLLNLTPERLQVVKRQWILGFAENGITKITQVKRGMAEMRAKPNGYLPSVGEFIQACKVLDYHELGLPNEAELYQRYNTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKAIPKLLTKAAEKVRSNFPFEDIPKMIPTKPSFYDKAKADKARDSLMAMMKGALQ*	rep_hall_hmm	common_virus	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0020	shell	direct	high	620	0.998	GCA_003351465.1_00445
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	462614	463312	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	14773	15471	GCA_003351465_1_1_440	GCA_003351465_1_1_440	-	1816295	.	PDB:2RU8_A	Primosomal-protein-1	MSMRLMVQAMNCKVGNPARKLVLLKLADNANDDGICFPSYQYIADKCEMSKRSAISHIDDLIKMGLITKKARKNKDGSSANLYLLHLEQGSEKSALGGENISLGSEKFAPITSHSLEPVNEPKKTTQKSESEILLERFGITGQLAKDFIAHRKTKRGAISETQLSRLQKQADKAGISICEVVEICIERNWQGFNASWDWRDEKLRTSQAQKMSFEEKNALPWNRPEDWENVL*	rep_hall_hmm	common_virus	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0021	shell	direct	high	698	0.999	GCA_003351465.1_00446
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	463309	463977	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	15468	16136	GCA_003351465_1_1_441	GCA_003351465_1_1_441	-	1816295	.	COG3645	Phage antirepressor protein YoqD, KilAC domain [Mobilome: prophages, transposons]. 	MNQLLTMTKENASILTMSSREIAEITHKEHKNVLRVIRDLIEQNLVAQIEPLKFEYRNQWFDYYELNKRDTFVVVARLSPEFTAAVVDRWQALENRQKPTALIPQSFSEALMLAAQLQAEKERNAPKVAFVDHYVEVGTSKSFRETAKILKMPERALVNRLVEDKYLYRQSGVLFPYQSAHTKDLFTVKTGTAEHGHNYTQTRVTSKGIEFIASRYASELML*	mmseqs_cdd	common_virus	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0022	shell	direct	high	668	0.999	GCA_003351465.1_00447
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	464025	464321	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	16184	16480	GCA_003351465_1_1_442	GCA_003351465_1_1_442	-	1816295	.	PFAM:PF10078.8	CII-like-regulator	MARNKLTRSARVLSDQVIDKYYKQKQYEVAEGMETTPSTLSRFISNEEFTQTFNFIAACQFGVFDTDTHIAIEKSEFEMLLLASQGFDKRLREKYLGK*	phrogs_hmm	hypothetical_protein	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0023	shell	direct	high	296	0.997	GCA_003351465.1_00448
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	464679	465335	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	16838	17494	GCA_003351465_1_1_443	GCA_003351465_1_1_443	+	1816295	.	pfam00717	Peptidase S24-like. 	MATLGERIKAYREQLKISQKELAERCNNIDTKSENARWGQPRIANYEKGNRTPDLEDISIISKALNILPEVLAFDSNISEIKESICRYPLLSPIQAGLWTDIRSLEGFDGYEMIPSTAIASENSFYLRIEGKSMLPRFNEGDLVLIDPDIVPTPGKFVAAINGDNEATFKQYKELGTRTPEGIPHFELVPLNPMFPTLSSLNQEIRIIGVARERVETL*	mmseqs_cdd	common_virus	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0024	shell	direct	high	656	0.998	GCA_003351465.1_00449
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	465392	465661	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	17551	17820	GCA_003351465_1_1_444	GCA_003351465_1_1_444	+	1816295	.	PFAM:PF13523.5	acetyltransferase	MDNLKLEYFSNINLNDQFFDSLKSDYKEFSDWFNKKQEKNECAFIFINDQGLLDGFLYLKIEDEELNDIKPNLPSKNKSTWNETRRAIY*	phrogs_hmm	hypothetical_protein	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0025	cloud	direct	high	269	0.996	GCA_003351465.1_00450
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	466403	466777	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	18562	18936	GCA_003351465_1_1_445	GCA_003351465_1_1_445	+	1816295	.	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains [Transcription]. 	MKILLSIKPEFVEKIISGEKKFEFRKSLPKREGITTIVVYSTMPVGKVIGEFKVKNTHSYDPEYLWEKTKEFSGITKNFFDEYFSTKALAHAFEIDSFKLYDEPLVISDILPSGTPPQSYCYIN*	mmseqs_cdd	nonviral_gene	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0026	cloud	direct	high	374	0.997	GCA_003351465.1_00451
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	467200	467373	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	19359	19532	GCA_003351465_1_1_446	GCA_003351465_1_1_446	-	1816295	.	COG3422	Uncharacterized conserved protein YegP, UPF0339 family [Function unknown]. 	MKFETYMDSRIEWRWRLKADNGKIIADSGEGYKNYTDCLHAIDLVKSTNQSTKVETV*	mmseqs_cdd	nonviral_gene	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0027	shell	direct	high	173	0.994	GCA_003351465.1_00452
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	467387	467596	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	19546	19755	GCA_003351465_1_1_447	GCA_003351465_1_1_447	+	1816295	.	.	hypothetical protein	MKKYLFHYYFQGTKWACDVYANNPEEAKEKIKAMSQAIYDGELKFEIHIPENPLSKLARLVARIIKKFT*	.	hypothetical_protein	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0028	shell	direct	high	209	0.995	GCA_003351465.1_00453
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	467806	468162	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	19965	20321	GCA_003351465_1_1_448	GCA_003351465_1_1_448	+	1816295	.	.	hypothetical protein	MWIFQNTFASTETQRHVKPLRMIDEVCFEMADIKQTRLKMEEKRYSEAGSVTSNTITEIQKEHIRACILKAIENGAYHPGLEERACQAISYINRFSDAQTKEELIDNKTGEVYVLVRP*	.	hypothetical_protein	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0029	shell	direct	moderate	239	0.669	GCA_003351465.1_00454
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	468148	468414	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	20307	20573	GCA_003351465_1_1_449	GCA_003351465_1_1_449	-	1816295	.	cd09725	Cas2_I_II_III	MANLILTYDLRNQRDYKSLIEAIKSYGTYAKLFESVWYIRSRTHTAEQCRDYLLQFIDNDDRLGVFDCSNNDFATMRALNKVSNLWSN*	hhsuite_tools	hypothetical_protein	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0030	shell	direct	high	266	0.996	GCA_003351465.1_00455
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	468675	469166	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	20834	21325	GCA_003351465_1_1_450	GCA_003351465_1_1_450	+	1816295	.	.	hypothetical protein	MAELFIESEYHSIPHQFAEFRVANVDYIIDFSSDNDVIESLFSLDERLVPLLKNRKTYSVKFGVKEYYESTDPSIDLYAPPINHQLKKTDIQHLKEQLETLLYKHYLIYQPECYFFIAERPSLSRMYQKMCDNRHPLMIDFQPIGQLGENSDCFIIKTPNYKE*	.	hypothetical_protein	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0031	shell	direct	high	491	0.998	GCA_003351465.1_00456
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	469170	469262	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	21329	21421	GCA_003351465_1_1_451	GCA_003351465_1_1_451	+	1816295	.	.	hypothetical protein	MAETKPSAKELKRQAMLASRLAYQKAKNQS*	.	hypothetical_protein	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0032	shell	direct	moderate	92	0.989	GCA_003351465.1_00457
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	469683	469853	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	21842	22012	GCA_003351465_1_1_452	GCA_003351465_1_1_452	-	1816295	.	.	hypothetical protein	MVQLISEFSAHIEGDVIFLAWASVGAFGNDEVVFILDEAIFVDAVFDPVIVTSLYF*	.	hypothetical_protein	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0033	.	unmatched_CDS	none	0	0	.
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	469988	470107	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	22147	22266	GCA_003351465_1_1_453	GCA_003351465_1_1_453	+	1816295	.	.	hypothetical protein	MNKLIITLVCAFVVYMVHALNLNQDCDGKICHAEQTQQY*	.	hypothetical_protein	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0034	shell	direct	high	119	0.992	GCA_003351465.1_00459
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	470149	470427	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	22308	22586	GCA_003351465_1_1_454	GCA_003351465_1_1_454	+	1816295	.	PFAM:PF13591.5	DNA-binding-protein	MESIKLSQKAEEEIVNAARMAALSNLTEKSQNLITLEDIAIYFGRHHQTVAKIISKLPNFPKPVTVDQQNSRPRYIAGEVVRWGRINAKRIS*	phrogs_hmm	hypothetical_protein	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0035	shell	direct	high	278	0.996	GCA_003351465.1_00460
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	470424	471095	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	22583	23254	GCA_003351465_1_1_455	GCA_003351465_1_1_455	-	1816295	.	PDB:1Z19_B	Integrase	MNKRVGSSPTLGTTYKPFIVGQGFFFYAFQPVKSIRYVHIRYKFIINPNLKYCHFLSIFIYFCVLITPKLRQCNMKWGAEEEKKMELQSQGLQPETLFSDVIKRYLNEITPTKRGEKHEFNRLNRFLRYPVTDKYISDVSRIGDEELCFDIKSNVLDATFRKLKKLAEREYLHFHDTRREALTRLSKKVDVMTLAKISGHKDISILQNVYYAPNMAEVAELLD*	common_virus_hmm	common_virus	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0036	shell	direct	moderate	420	0.625	GCA_003351465.1_00461
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	CDS	471241	471333	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	23400	23492	GCA_003351465_1_1_456	GCA_003351465_1_1_456	-	1816295	.	.	hypothetical protein	MAAEKLTKKRLAQILIMLCILIIAFVWRYF*	.	hypothetical_protein	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_CDS_0037	shell	direct	moderate	92	0.989	GCA_003351465.1_00463
GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote	cenote	tRNA	334223	334299	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C17	3214	3290	tRNA-Val	tRNA-Val	+	1816295	.	tRNAscan-SE score: 70.7	Val	NA	tRNAscan-SE	.	C17	6390	331010	337400	GCA_003351465.1|CP031241.1@region_331011_337400@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	tRNA	471059	471141	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	23218	23300	tRNA-Leu	tRNA-Leu	-	1816295	.	tRNAscan-SE score: 61.6	Leu	NA	tRNAscan-SE	.	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote	cenote	tRNA	458146	458216	GCA_003351465.1	CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465.1_CP031241.1	GCA_003351465.1|CP031241.1	GCA_003351465_1_1	GCA_003351465_1_1@C25	10305	10375	tRNA-Trp	tRNA-Trp	-	1816295	.	tRNAscan-SE score: 51.3	Trp	NA	tRNAscan-SE	.	C25	23492	447842	471334	GCA_003351465.1|CP031241.1@region_447843_471334@tool_cenote_tRNA_0001	.	.	.	.	.	.