core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	787238	787636	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	1	399	GCA_003351585_1_1_757	GCA_003351585_1_1_757	+	1848871	.	PFAM:PF06141.10	Minor-tail-protein	MLIHEEIRDEVIERLKPTLSSHVKRFYSGRILGLNPSEQCPAISVYLEDISLDQTCLCDSELNATLNIAIYLKPHSGEDELDNIAELIRNTIYNSELKSVLNISLKSYDYNYDEEQAAWISSVLQFAINYDE*	hallmark_hmm	common_virus	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0001	shell	direct	high	398	0.997	GCA_003351585.1_00787
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	787646	788836	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	409	1599	GCA_003351585_1_1_758	GCA_003351585_1_1_758	+	1848871	.	CDD:COG4653	Major-Capsid-protein	MLKKLIELRQQKAEKVAEMRAMLDKAEKENRSLNESESVEFEKLKDSSKQISAEISKYETVTDEERSLEGNVSPVEQRGAKQFSNDELRHYIKTGELRNLTTANGEDGGYSVIPQLDKDVMKRLTDDSVMRQLCNVVRLPVGAKEYKKLVSAGGATVERGTEGTARNGTTTPKLHEVTIALNSIYAYPKTTQEILDFSSIDVLGWLTDEISESFTETEEIDLTDGDGTKKSKGFLSYERSTEADKVRAFGKLQKLEVAGADKITADTLIDLFYTLHSKYRKNAVWVMSSTIAAALQKLKNKNGDFIWRDGLTVDAPSTLLGRPVYFLETMPASGANKPVVAFGDFKRGYFIVDHETGVRTRPDNITEPGFYKVHTDKYLGGGVVDSNAIKVIETTA*	hallmark_hmm	common_virus	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0002	shell	direct	high	1190	0.999	GCA_003351585.1_00788
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	788881	789447	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	1644	2210	GCA_003351585_1_1_759	GCA_003351585_1_1_759	+	1848871	.	CDD:COG3740	head-maturation-protease	MKKEFEIRSATIATDEENQKLVGYAVKWNSPSQVLYCDFVESFAPKAFSESLASGEDVRALFEHDYTKLLGRTSAGTLKLEEDSIGLRFELTPPDTTLGRDLLVSVERGDISGMSFGFWAKEETWNFDVEPCQRTVQKAELFEVTVTSIPAYPESSVEIAKRSMVAAKEKTQKHSTALLKQWLDVMEA*	hallmark_hmm	common_virus	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0003	shell	direct	high	566	0.998	GCA_003351585.1_00789
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	789449	790681	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	2212	3444	GCA_003351585_1_1_760	GCA_003351585_1_1_760	+	1848871	.	CDD:COG4695	Portal-protein	MWNPFRRKEQRSEPTTIEELLSYMGVNNTGAGEFVSPQTAESLPAVMNAVTVISEAVASMPCYLYALKEDGRERIYRHPVEYLLNEMPNRSQTPYQFKNTMMRHCLLNGNAYAVIEWNNKGEPISLTPYQPSAVNIFRKVTGKYIYQITDLNGVTKNYLQDEILHLRHSSIDGFMGRSPITVCRETVGLGLAQQRHGAAIMKNGLMASGLISTAEWLDDAKAQKAVKALERYKGAKNAGKTPILEGSMEYKQLGMTNQDAEWLASRTFTISDIARIYNISPIFLQDYSNSSYSNFSEASRAFLSQTLRPWLTNFEQQLKDALMIDLGSNTNKRYLIEFDTSDLLRTSQSERFSSYDVAIKAGVMSPNEVRRREGLPPYEGGDEFSQAWKQTVEVKRGDEQEQGASNGSDA*	hallmark_hmm	common_virus	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0004	shell	direct	high	1232	0.999	GCA_003351585.1_00790
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	790665	791021	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	3428	3784	GCA_003351585_1_1_761	GCA_003351585_1_1_761	+	1848871	.	PDB:2KZ4_A	Head-tail-adaptor	MAVMLKAGKYNKVITIEARNYPRERETNLHGEHKAFWKHIATVRASVEPLQGREYFSGPFQMGENIIRIRIRYIEGITNKMRIKYGKRLFDIYSVIDSMESHRELQLMCKEGEAYGEY*	hallmark_hmm	common_virus	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0005	shell	direct	high	356	0.997	GCA_003351585.1_00791
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	791008	791322	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	3771	4085	GCA_003351585_1_1_762	GCA_003351585_1_1_762	+	1848871	.	CDD:TIGR01560	uncharacterized-phage-protein-(possible-DNA-packaging)	MENINLTLDDIKAHLNLDHDLDDALLETYKVATLEVCQKHIGKTFGDEETENTVPFTPSIKVGCLMYIAYLYTNREAITDLANLKQAPMTISALWEVYREPCAY*	hallmark_hmm	common_virus	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0006	shell	direct	high	314	0.997	GCA_003351585.1_00792
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	791333	791689	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	4096	4452	GCA_003351585_1_1_763	GCA_003351585_1_1_763	+	1848871	.	PDB:5H0M_A	HNH-endonuclease	MPYQPLKRCSYPGCRNKVKSGRCEEHKPKDNRPSSSARGYNHKWSKYRAQYLKHHPLCVMCLEKGIYTPATVIDHIKPVENGQADPLFWVESNHQSLCRDCHSYKTRVIDQRGFGAKK*	common_virus_hmm	common_virus	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0007	.	unmatched_CDS	none	0	0	.
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	791919	792293	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	4682	5056	GCA_003351585_1_1_764	GCA_003351585_1_1_764	+	1848871	.	CDD:COG3747	Small-Terminase	MTAKKKNLHTPPSFLDPIAKSVWKERIPQLLERGDIQDADLIHLELYCVNYSLFRAAVEDIHKNGFSIVNSQGTQSRNPALSAKADAEKVMVKMSSLLGFDPVSRRKNPVEVDSTDMIDEILTM*	hallmark_hmm	common_virus	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0008	shell	direct	high	374	0.997	GCA_003351585.1_00793
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	792301	793968	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	5064	6731	GCA_003351585_1_1_765	GCA_003351585_1_1_765	+	1848871	.	CDD:COG4626	Large-Terminase	MAIWHEYAEKIQSGEIVACKKIKQAVARYFNDLNNPDYFFDQSAVEKFIAFSKLCPHVKGHLRGEPIILSDWQVFLFANILGFKRKDTGLRKYRSAYVQVARKNAKSTVAAVLANWFLVMEGGQQDIYTAAVSRDQARIVFDDARQMCLLSPLLKKRLNIQQHKLINPKNNSIMRPLAAKSSTIEGTNPSLAIVDEYHLHTDNSVYSALELGQGARPEGLLFAITTAGSNVISACKQHYDYCAQILEGNEQNDSLFVLIFELDEENEIDKQENWIKANPNIGKSIPYLDFENTIKKARGIPSEWVEMLTKRFNVWCQGTTPWLGEGNWAQCERQYTESDLLHQDCYLGLDLSSTNDLTSLCYTFPQGKKVRLVTRHYIPEFQLNNVANKNRAMYRNWVRSGWLIATEGDCIDYDKIRDDILKDAQRFNIKMIGFDVWNATHLRTQLQAAGLEVEPFPQTYQRFSPVAKSAEVLINRQMIEHHGDPVLTWALSNVVMETDANANIKPNKKKAANKIDPAVAFLMSFGTYQLEYGDLIFELSDEHKHALEQFNGIDL*	hallmark_hmm	common_virus	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0009	shell	direct	high	1667	0.999	GCA_003351585.1_00794
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	793984	794451	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	6747	7214	GCA_003351585_1_1_766	GCA_003351585_1_1_766	+	1848871	.	PFAM:PF04883.11	tail-component	MAVQIKGLKELEQNLKKLNKDINKVAAKAIRKGLNSAAKSIEKTIKPNVPTLKSSTNFRQKGTIKNNVRHKTRVAKDGLSGITAIRVMRTNGRRMAKIGENTRDKSDPFYWWMVEYGTVKMKGRHYMEKGFKSGEAQALRIAKEVAEEELKKAFK*	hallmark_hmm	common_virus	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0010	shell	direct	high	467	0.998	GCA_003351585.1_00795
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	794722	795024	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	7485	7787	GCA_003351585_1_1_767	GCA_003351585_1_1_767	+	1848871	.	.	hypothetical protein	MFDGLLIIFLVFLCFLMIAALGVYSVPIFIAFIAWFWWIEKKAIKKAEEKMIMEKTLKQMEDEFRKKQEENKPFISGTITHIGNDGKETRLGNITIHLKE*	.	hypothetical_protein	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0011	shell	direct	high	302	0.997	GCA_003351585.1_00796
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	795124	796128	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	7887	8891	GCA_003351585_1_1_768	GCA_003351585_1_1_768	+	1848871	.	.	hypothetical protein	MVSQKFLPKKAYSIIDAVKYISLNYNINISEYDLLEYIQSGDLQASIHLDGRINKIDRVNKREIPHNKTLNIRNEEIFLQFNQKDTKSKIEHNEDFNIYQIKLNHIYFSIDIILNDCYYLPKYFSENDEIKLYTGELDRFRNLVFNGYFPLSKEVFEPYNTIELMECGYIDEFPDIYVNTFSGLYLHLPICENRTELYLEDVYIIHEDMIEFLKLFSVIDDSYEQQEETQKLKNQIRDKNKQIEELQKQIEKNSKVKKSTASENKKNEFIKALLQIKYGAEVAENPRPHVYDPNDSDKGKDGVIQRDFESKGLTKHLPSGKTLKNWVSSVELDN*	.	hypothetical_protein	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0012	shell	direct	high	1004	0.999	GCA_003351585.1_00797
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	796272	796475	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	9035	9238	GCA_003351585_1_1_769	GCA_003351585_1_1_769	+	1848871	.	COG3311	Predicted DNA-binding transcriptional regulator AlpA [Transcription, Mobilome: prophages, transposons]. 	MNLNLNPNQKLISGETACHIVGFGRTKLNLLVKAKKFPQPIRFSKNFVRWDLEEVNKWIEEQKAARA*	mmseqs_cdd	nonviral_gene	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0013	shell	direct	high	203	0.995	GCA_003351585.1_00798
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	796581	797510	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	9344	10273	GCA_003351585_1_1_770	GCA_003351585_1_1_770	+	1848871	.	PF10554.9	Ash protein family	MNLIHKYYINNENFYNLNPLQSAVKFGIISPQSQKTIAEPRNSTYLQLAQSTPKACFFMRNIRTPKEFADFVFIDQIYKSLSMVACSGKGSPFAVFQLSQFSRPLHVTAKASKLYAVTLKCLQLELRKMYQFIFALIRAPQIKIRLLADNEQQARSRFTDGDTLLFVGRINQNPFKNNRTFSTNVNNHSLPKCEDVGSIESTITRKGNRNPYQCGIFLPKIHSLHVPEKSGALSYIEFAVRLRDRNKALSTNQIRSFRGVVETVLHPMGDTSKNTKHGNPTMKIYPKNNRTLAALPTLSVSATQGGANV*	hhsuite_tools	hypothetical_protein	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0014	shell	direct	high	929	0.999	GCA_003351585.1_00799
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	797503	797871	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	10266	10634	GCA_003351585_1_1_771	GCA_003351585_1_1_771	+	1848871	.	.	hypothetical protein	MFDQAVLKALQDKASFNEFNPFSRIAKATKKDLESLRNESEMLCESIEYGLMHLGDLMQTLGNLADTEQDFTREAMSNDNVKHIGGLIKANAYLLNALRETASLSEYYLAGGLDGEIERNDD*	.	hypothetical_protein	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0015	shell	direct	high	368	0.997	GCA_003351585.1_00802
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	797861	798061	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	10624	10824	GCA_003351585_1_1_772	GCA_003351585_1_1_772	+	1848871	.	.	hypothetical protein	MTIKPNLPYQLIFVYDDGDQFIAGKYGTLREALQAKIRCKHEIGQTDICGRVLEVITVLKGEENES*	.	hypothetical_protein	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0016	shell	direct	high	200	0.995	GCA_003351585.1_00803
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	798051	798257	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	10814	11020	GCA_003351585_1_1_773	GCA_003351585_1_1_773	+	1848871	.	.	hypothetical protein	MKAKKIKSFKEPYVPTPEQLEKACKRIKQFLAFAEDYLHTGHYKGLAASIEQIKKAATIRKVAQHETK*	.	hypothetical_protein	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0017	shell	direct	high	206	0.995	GCA_003351585.1_00804
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	798244	798786	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	11007	11549	GCA_003351585_1_1_774	GCA_003351585_1_1_774	+	1848871	.	.	hypothetical protein	MKPSNPMQQLQQWKDNRNANLHSANTNKLKNELVKSAVKSANQPNSGLVKNLQGETKNKYQGKLYANPLAFKFAQLTRQFKLILDSNRKCLEVYPDDFHHKIKFRDELTDLVVRLKTGGKLFNEMVKTQGAKLNPNNQETIRNFNQANDYLIHKFGEVIKQIEQLQVENIEKQKLINEEK*	.	hypothetical_protein	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0018	cloud	direct	high	542	0.998	GCA_003351585.1_00805
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	798788	799231	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	11551	11994	GCA_003351585_1_1_775	GCA_003351585_1_1_775	+	1848871	.	.	hypothetical protein	MDMDQKLDYSKLSALELKAIAMSYRNMLENKGETFHSSLPYLNGAIEVLAEELADCPAMNIDELKILHDELLMVNKHLLQMAPKPSSSNPEEIVATLTNDEIIDGLLKNSIALSLVKTFKYFQEVIADRINVIENGVIKGVNNGTIN*	.	hypothetical_protein	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0019	shell	direct	high	443	0.998	GCA_003351585.1_00806
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	799215	800984	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	11978	13747	GCA_003351585_1_1_776	GCA_003351585_1_1_776	+	1848871	.	PFAM:PF04735.11	DNA-helicase	MARLINAPHLADQIHEPYSDIFILAGRKAWQAWDNGKGEEWLLLCSLIHGLDRNIKPVILAENQLENISSIRIVKEDQRSVKLVQYGELAQAEITAICQNLAKNSYAIDVKLLDAAAQTKEDLSGYIQRLRNDKETADFAEQLAPPEKLKEKDGTNKKSRAFQKWLNLDMALQRGCREIYAYDGKTWNKQENDELEEKAVKFLDENEFNYSDSTIERLIKTLKAQLPRMGEMSNDLIAFENGVLNRNTMEFESHNRQNWLTSCIPHKYDKHVTDTPHFDKWLSFVSDGNKEKARNILAVLYAILTNRYNWQMFFEITGKGGSGKSVFASIATLLAGVKNTASSNLEKFDDERGLSGLENKTLILCPEQSKYAGDGSGLKSITGGDTVRVRYNYQDPFDVKITALVMLINNRPCSFTERSGGVDRRRVIFDFKKIVPEDERDPHFMDKITLEVGGIIRKVFDSFPDPSDAKKALKAQMESQEALEVKKLSDPLTDFFGYFYTTEQTDGLFIGVTNMGLDKIRTHLYPAYLAYTKAMNIGELGLNNFVIGVEQALKQNGNKHDFMKRHTKTGRRTNIHFKDFDSFRNEMFS*	rep_hall_hmm	common_virus	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0020	shell	direct	high	1769	0.999	GCA_003351585.1_00807
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	801156	802382	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	13919	15145	GCA_003351585_1_1_777	GCA_003351585_1_1_777	-	1848871	.	PDB:1Z19_B	Integrase	MARIVKPLSPTEIKNAKPKEKEYTLSDGEGLLLLILPSGSKSWRFNYARPLTGKRTKMALGGYPELSLADARAKREEYRALLAKGIDPQEEKIRIQQEYENRLKDTFHSVAESYFNGIYKEKAKNPETREKNWERLKNHIFPYIGDKHVSEIKVKELVSIYEKIADRSNTLKKIHQLVGAIMDHAITKGIIESHNCRLAVKNFYIKSSTPHPTIKLDELSKLFQDLENARIGKKTYLLICWSFLTALRPKEAVNAEWSEIDFDNKLWNIPKEKMKGQADKKRPHTVPLSSQAIQLLEVMKLFSENSSFVFAGRSSKNQPMNKATVNVALKRIGYKDKLTAHGIRAFIKTFLASNKVERNVSETILSHLLEGGDDLENTYNRYNYLEERKPIMQLIGDYCESCGMNLNL*	common_virus_hmm	common_virus	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0021	shell	direct	high	1226	0.999	GCA_003351585.1_00808
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	802680	803021	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	15443	15784	GCA_003351585_1_1_778	GCA_003351585_1_1_778	-	1848871	.	COG1314	Preprotein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular transport]. 	MYQVLLFIYVVVAIALIGFILVQQGKGANAGASFGGGASGTMFGSAGAGNFLTRTSAILATAFFVIALVLGNMNSHKGNVQKGTFDDLSQAAEQVQQQQAAPAKDNKNSDIPQ*	mmseqs_cdd	nonviral_gene	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0022	persistent	direct	high	341	0.997	GCA_003351585.1_00810
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	803130	805085	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	15893	17848	GCA_003351585_1_1_779	GCA_003351585_1_1_779	-	1848871	.	PDB:5D5H_A	DNA-topoisomerase-1	MRLFIAEKPSLARAIADVLPKPHQRGDGFIKCGDNDVVTWCVGHLLEQAEPDAYDPKFKQWRLEHLPIIPEKWQLLPRKEVKKQLSVVEKLIHQADTLVNAGDPDREGQLLVDEVFSYANLSAEKRDKILRCLISDLNPSAVEKAVKKLQPNRNFIPLATSALARARADWLYGINMTRAYTIRGRQTGYDGVLSVGRVQTPVLGLIVRRDLEIEHFQPKDFFEVQAWVNPESKEEKAPEKSTALFSALWQPSKACEDYQDDDGRVLSKGLAENVVKRITNQPAEVTEYKDVREKETAPLPYSLSALQIDAAKRFGMSAQAVLDTCQRLYETHRLITYPRSDCRYLPEEHFAERHNVLNAISTHCEAYQRLPNVISTEQRNRCWNDKKVEAHHAIIPTAKNRPVNLTQEERNIYSLIARQYLMQFCPDAEYRKSKITLNIAGGTFIAQARNLQTAGWKELLGKEDDTENQEPLLPIVKKGQILHCERGEVMSKKTQPPKPFTDATLLSAMTGIARFVQDKDLKKILRETDGLGTEATRAGIIELLFKRGFLTKKGRNVHSTETGRILIQALPDIATQPDMTAHWESQLTDISQKQATYQQFMHNLNQMLPDLVRFVDLNALRQLSRIKMIKSDRVKPKSAVKKSSKSNGETD*	common_virus_hmm	common_virus	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0023	persistent	direct	high	1955	0.999	GCA_003351585.1_00811
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	805101	805703	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	17864	18466	GCA_003351585_1_1_780	GCA_003351585_1_1_780	-	1848871	.	COG0353	Recombinational DNA repair protein RecR [Replication, recombination and repair]. 	MQSSPLLEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLARALTEAMSKIGHCSQCRDFTEEDTCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQKRLVEESFHEVILATNPTVEGDATANYIAEMCRQHNIKVSRIAHGIPVGGELETVDGTTLTHSFLGRRQID*	mmseqs_cdd	nonviral_gene	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0024	persistent	direct	high	602	0.998	GCA_003351585.1_00812
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	CDS	805836	806165	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	18599	18928	GCA_003351585_1_1_781	GCA_003351585_1_1_781	-	1848871	.	TIGR00103	DNA-binding protein, YbaB/EbfC family. The function of this protein is unknown, but it has been expressed and crystallized. Its gene nearly always occurs next to recR and/or dnaX. It is restricted to Bacteria and the plant Arabidopsis. The plant form contains an additional N-terminal region that may serve as a transit peptide and shows a close relationship to the cyanobacterial member, suggesting that it is a chloroplast protein. Members of this family are found in a single copy per bacterial genome, but are broadly distributed. A member is present even in the minimal gene complement of Mycoplasm genitalium. [Unknown function, General]	MFGKGGLGGLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKITINGAHNCRRIDIDPSLMEDDKEMLEDLIAAAFNDAVRRAEELQKEKMASVTTGMPLPPGMKFPF*	mmseqs_cdd	nonviral_gene	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_CDS_0025	persistent	direct	high	329	0.997	GCA_003351585.1_00813
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1453625	1454707	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	1	1083	GCA_003351585_1_1_1379	GCA_003351585_1_1_1379	-	1848871	.	cd06827	Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases. This subfamily is composed mainly of proteobacterial alanine racemases (EC 5.1.1.1), fold type III PLP-dependent enzymes that catalyze the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. hese proteins are similar to other bacterial ARs and are fold type III PLP-dependent enzymes containing contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	MNVKPATAKISSHALKQNLEIIKQKAPNSKIIAVVKANAYGHGVVFVASTLEQNVDCFGVARLEEALALRSNGITKPILLLEGFFNEQDLPILAVNNIETVVHNHEQLDALKRANLPSPIKVWLKIDTGMHRLGVALDEVDYFYQELKKLPQIQPHLGFVSHFSRADELESDYTQLQINRFLSVTKDKQGERTIAASGGILFWPESHLECIRPGIIMYGISPTDTIGKEFGLTPVMNLTSSLIAVRHHKQGDPVGYGGIWTSPRDTKIGVVAMGYGDGYPSNVPEGTPIYLNGRLVPIVGRVSMDMLTVDLGADSQDLVGDEVILWGKELPIETVAKFTGILSYELITKLTPRVITEYVD*	mmseqs_cdd	nonviral_gene	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0001	persistent	direct	high	1082	0.999	GCA_003351585.1_01455
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1454717	1456123	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	1093	2499	GCA_003351585_1_1_1380	GCA_003351585_1_1_1380	-	1848871	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MASQPQIKSSDKKTAQVSIPPHSIEAEQAVLGGIMLSNQHWDGIAERVIADDFYTFQHRLIFTEMEHLMRNQSPIDLITLDQALRSRGVSDEVGGFAYLAELSNNTPNAINILAYADIVREKAILRELISVGNRIAENSYSPKGQDIKLILDEAEREVFAIAEKRTTSSEGPQNVINVLESTIEKIDILSKLENHSGVTGVTTGFTDLDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAAMASEKPVLVFSLEMPAEQIMMRMIASLARVDQTKIRTGQNLDEIEWNKIASVVGMFKQKNNLFIDDSSGLTPTDVRSRARRVYRENGGLSMIMVDYLQLMRAPAFSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRTLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSEDKGVAEIIIGKQRNGPIGRVRLKFNGQFSRFDNLAEQREYRDDY*	rep_hall_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0002	persistent	direct	high	1406	0.999	GCA_003351585.1_01456
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1456265	1457701	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	2641	4077	GCA_003351585_1_1_1381	GCA_003351585_1_1_1381	-	1848871	.	PRK05826	pyruvate kinase; Provisional	MSRRLRRTKIVCTMGPSTDRDNNLEKIIAAGANVVRMNFSHGTPDDHIGRAERVRSIAKKLGKTVAILGDLQGPKIRVSTFKDGKIFLNVGDKFILDAELPKGEGTQESVGLDYKTLPQDVVPGDILLLDDGRVQLKVLSTDGAKVFTEVTVGGPLSNNKGINKLGGGLSADALTEKDKADIITAARIGVDFLAVSFPRSSADLNYARELAQQSGLNAKIVAKVERAETVANDEAMDDIILASDVIMVARGDLGVEIGDPELVGVQKKLIRRSRQLNRAVITATQMMESMISNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMASVCLGAEKMPSINVSRHRMDKEFETIEESVAMSAMYAANHMKGVAAIVTLSSTGRTPLLMSRISSGLPIFALSRNQETLNLCALYRGVTPIYHGEESRTEAGAKAALQSLKEKGYLSTGDLVLVTQGGQGATQTNVCRTLIVE*	mmseqs_cdd	nonviral_gene	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0003	persistent	direct	high	1436	0.999	GCA_003351585.1_01457
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1458241	1459494	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	4617	5870	GCA_003351585_1_1_1382	GCA_003351585_1_1_1382	+	1848871	.	PDB:1Z19_B	Integrase	MPKLVKPLTTTEITKAKPKEKDYSLSDGYGLFLFVRVTGSKIWRFQYYKPIIKKRTIISLGSYPELSLADARVKRDEYRGLLAKNIDPQEHNFILEQEALQEKENLFSTLAEKWFEFKHHEVKAGNLKQVTYDDIVDRVTRHLLPHFGHMELKNISAPLARNKLKYLEKEGKLDTLHRVIGYMSKIMTLDVNIGLLHSNPIANLSEGFLRPIAENNPTIPPERLSEFFAALQSSKMSLEVRCAIELLLLTATRVGALTQMEWSEINFDEKLWYIPKHKMKGRVGKVQDFIAPLSKQALAVLAVMKKLTGNQKYVFTGFKNSNEPMNKETPNKAIKRMGYQNTLTAHGLRSIFSTEMNDAEFNSEIIEVCLAHFEYSSVRGTYNKAKYLTQRIEYMQWWGDFVEERARESAAMCLTSD*	common_virus_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0004	cloud	direct	high	1253	0.999	GCA_003351585.1_01459
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1459491	1459706	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	5867	6082	GCA_003351585_1_1_1383	GCA_003351585_1_1_1383	-	1848871	.	PFAM:PF10013.8	excisionase-and-transcriptional-regulator	MQEVFIGVNMTEELLRLKNTARVLDISRSTLLRRMKDDKDFPEPIKIGRFLYWRSTDIQRYIDCKQAQMAN*	phrogs_hmm	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0005	shell	direct	moderate	189	0.875	GCA_003351585.1_01460
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1459735	1460160	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	6111	6536	GCA_003351585_1_1_1384	GCA_003351585_1_1_1384	-	1848871	.	PF13876.6	Phage protein (N4 Gp49/phage Sf6 gene 66) family	MNSINTEFLQQQIADTAYHQLDGTTITIAVIKLHSGFTVTGESACVDPNNFDVEIGKKIAYENAFDKLWQLFGFELKQKIGGDWIYRLQRERNELAERLDKLKAYLDGMKECDPDRLKLLNKQVGAMDDYLDILNQRLAYV*	hhsuite_tools	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0006	cloud	direct	high	425	0.998	GCA_003351585.1_01461
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1460157	1460726	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	6533	7102	GCA_003351585_1_1_1385	GCA_003351585_1_1_1385	-	1848871	.	.	hypothetical protein	MIRNSRWTPEVPRPTLNDEHLFAAFLKEWVEKEYKDEVNSAKKYFEDEEFDIEDFGIYQSILKEWIGDNEDTAENLIKWQGWDYRQAKEFEEKNLEYDFDKENNRLSKQWVTDNVYTLPFSVGSRVKLGLKEGIIMEDKNNNYLPFGKVCVLADKQAAKNKKWQDQGISSRHGGYIVNWESLELIEEKQ*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0007	shell	direct	high	569	0.998	GCA_003351585.1_01462
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1460829	1461263	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	7205	7639	GCA_003351585_1_1_1386	GCA_003351585_1_1_1386	-	1848871	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MARNTNTVILVGYLGSDPEIRQFQNGGQIATFNLAIGDDYRDRQGNTVKRTHWIPIVVHGNSADVARQYLQKGSKICVTGKLVQESWQDQNGNNRTALKVATQSFEMLDSKASSETQQPSKDKEKPGPLNAAAEQDGFNDDIPF*	common_virus_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0008	shell	direct	high	434	0.998	GCA_003351585.1_01463
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1461263	1461913	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	7639	8289	GCA_003351585_1_1_1387	GCA_003351585_1_1_1387	-	1848871	.	PDB:3SZ4_A	Exonuclease	MEMYQLKARCSGLADLMVKPKSGNGISATAKSAVRKIVKFDLFGYRDFEGNKYTEKGIALEEQAIKLSGRKRGLPLKKNTERRENDWITGECDIYVPSRRLIIDTKCSWDIGSHPFFADEAEEKAKKAGYDAQMQGYMWLWDCDEAQIDFVLLPTPYDQLSSYDDPNRYIDLVEQIPQEKRITTVTIKRDEKVIEKIKERVEIAQEYYQQLIQEMR*	common_virus_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0009	shell	direct	high	650	0.998	GCA_003351585.1_01464
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1461888	1462808	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	8264	9184	GCA_003351585_1_1_1388	GCA_003351585_1_1_1388	-	1848871	.	PFAM:PF03837.13	RecT-protein	MTNQVQHQQNKQTPALKTFFESANVQNKIKELVGKNAATFATSVMQIANSNSMLKTADPMSIFNAACMAATLNLPLQNGLGFAYIVPFRNNKEKKTEAQFQIGYKGFIQLAQRSGQFKRLVALPVYKKQLIKKDFINGFEFDWEQEPEQNENPIGYYAYFKLVNDFSAELYMSHDDIVKHAQRYSQTFKKGYGVWHDNFEAMALKTVTKLLLSKQAPLSVEMQQAVLADQAVVKDVENQEFNYTDNIQEAEFLAVVDEATFEQCKQSITNGETTLQELCDSGAYEFSQEQIAELEAIENGNVPTQS*	common_virus_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0010	shell	direct	high	920	0.999	GCA_003351585.1_01465
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1462821	1463114	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	9197	9490	GCA_003351585_1_1_1389	GCA_003351585_1_1_1389	-	1848871	.	.	hypothetical protein	MKPSDDYYYQLDAAYQRKVDWQAGYEIALDEVATEIDNDLKQGDQTHYHELTEMLCDNDNFWLAIGSGASYEPYRQEAIKKIAERELHDRMNDYDPD*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0011	shell	direct	high	293	0.997	GCA_003351585.1_01466
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1463111	1463455	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	9487	9831	GCA_003351585_1_1_1390	GCA_003351585_1_1_1390	-	1848871	.	.	hypothetical protein	MKHSKAPLRQEKQSFTHFMNGSEKWLNRICYFLAALIIALIVGGISLHANAHPTDWHDNELSQQIQAETQCELKGGIYENGVCLPPNLTLTAEKELQAYTAQKQAEINRTWSKQ*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0012	shell	direct	high	344	0.997	GCA_003351585.1_01467
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1463543	1464172	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	9919	10548	GCA_003351585_1_1_1391	GCA_003351585_1_1_1391	-	1848871	.	pfam10548	P22AR C-terminal domain. This domain was identified by Iyer and colleagues. It is found associated with pfam10547.	MSNLTILKTSIRSYENLFSLNDLHIASGGLEKHRPSLFARNEQTKELIKEIENDRSTKTIFALKTIRGGSDISKQGTWACEELVLSYAMWISPKFHLIVLRAFLAMHRNQPQQLALPEPEKKFTFEFTEYELEQLVWLWCGHKQMNTLLGDMIKPLETIGSYFTGMVISHHQEYRRQYKNTLPTIQRLIQPFKASNRMNWERAKNLIAQ*	mmseqs_cdd	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0013	cloud	direct	high	629	0.998	GCA_003351585.1_01468
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1464443	1464745	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	10819	11121	GCA_003351585_1_1_1392	GCA_003351585_1_1_1392	-	1848871	.	.	hypothetical protein	METSETSASQQKKGNSFELMLFGWLCYIGAVVSIGYGLSKIMMYKNFGPDLSSLNVNAYVGGDGYNYIINGTYATTFCALAAALAIIGSTCFIVNAINKK*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0014	cloud	direct	high	302	0.997	GCA_003351585.1_01469
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1465021	1465242	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	11397	11618	GCA_003351585_1_1_1393	GCA_003351585_1_1_1393	+	1848871	.	.	hypothetical protein	MNKAKADTLALLLARDIAKTSSSSTALPFTYLNRNSAESIADFVEMLSKRFEALDDSISLPHILNAYKNQSDK*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0015	cloud	direct	high	221	0.995	GCA_003351585.1_01470
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1465211	1465486	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	11587	11862	GCA_003351585_1_1_1394	GCA_003351585_1_1_1394	-	1848871	.	.	hypothetical protein	MWIFQNTFASTETQRHVKPLRMIDEVCFEMVTIKQTRLKMEEKQENSLSDNDKELIKQAVLESAAKNTNFPPDKLAKSICDAIYLIDSYKH*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0016	shell	direct	moderate	159	0.576	GCA_003351585.1_01471
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1465775	1466299	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	12151	12675	GCA_003351585_1_1_1395	GCA_003351585_1_1_1395	+	1848871	.	PF14163.6	Super-infection exclusion protein B	MEEYAKLLNTILTKVVFTHMTMFFVFLFSSFYFMPPELAADMDAKTPIFFPNWFPLSALGSIIFTLLSTGAWILLCNGIKLAFTKFRQVSITYSESDKLIKLLSNLSELEKEILVSSCLGERIWSEDFKTKVAIEKLISLNLISHSWVYNCYEVNTLIKPFIISELDKLTKTHH*	hhsuite_tools	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0017	cloud	direct	high	524	0.998	GCA_003351585.1_01472
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1466625	1466792	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	13001	13168	GCA_003351585_1_1_1396	GCA_003351585_1_1_1396	+	1848871	.	.	hypothetical protein	MKKEFKKWLISLNCEGINSLGINEIVSRVDEELRIVRANEQERIVLEELIAEFKC*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0018	shell	direct	high	167	0.994	GCA_003351585.1_01473
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1466826	1466942	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	13202	13318	GCA_003351585_1_1_1397	GCA_003351585_1_1_1397	-	1848871	.	.	hypothetical protein	MKKKRVDADYILSLNINSKDVQYQILWAEKCWHLLDKQ*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0019	cloud	direct	high	116	0.991	GCA_003351585.1_01474
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1466939	1467187	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	13315	13563	GCA_003351585_1_1_1398	GCA_003351585_1_1_1398	-	1848871	.	.	hypothetical protein	MIKANDIYNRAKQLAESTNETEQRECIKTLYYAVLHKIQEVCDSKELPRTRAINLGSHESMIERINVQNLPSEKQIVSYAKK*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0020	cloud	direct	high	248	0.996	GCA_003351585.1_01475
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1467187	1467966	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	13563	14342	GCA_003351585_1_1_1399	GCA_003351585_1_1_1399	-	1848871	.	.	hypothetical protein	MVGAIALTKFNEISSEVVNFRNKSFDGNYIDKVQAFAFIDELKPLTKTKDKALAFSLLGTLYCLLGDLNNMEFNYRTALKFSPRDIRIRFNYAIDLYYSYRPIAALIQAQEMLNLNVKDIEILYSIYLLLDNLIKINECEKVMQMIEKLPAKQTQDYFTWINNKKSLLRAYHDLKIDLPLLSKLIDSIQSDLSPQHPKSVYVEHYYDYDDKTIVYSFIDEKSDVDSAFKFDEQLTDYIIEFERKNNVHFHNFVMMYEAR*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0021	cloud	direct	high	779	0.999	GCA_003351585.1_01476
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1468043	1468699	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	14419	15075	GCA_003351585_1_1_1400	GCA_003351585_1_1_1400	-	1848871	.	pfam00717	Peptidase S24-like. 	MATLGERIKAYREQLKISQKELAERCNNIDTKSENARWGQPRIANYEKGNRTPDLEDISIISKALNILPEVLAFDSNISQIKESICRYPLLSPIQAGLWTDIRSLEGFDGYEMIPSTVIASENSFYLRIEGKSMLPRFNEGDLVLIDPDIVPTPGKFVAAINGNNEATFKQYKELGTRTPEGIPHFELVPLNPMFPTLSSLDQEIRIIGVARERVEAL*	mmseqs_cdd	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0022	shell	direct	high	656	0.998	GCA_003351585.1_01477
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1468831	1469037	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	15207	15413	GCA_003351585_1_1_1401	GCA_003351585_1_1_1401	+	1848871	.	cd00093	Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	MNNLSQIRGQLGITQRQLANHIGWSQPRIANYETGLRSPSLSVAQKIVQTLNSLGAKVCIEDVFPSQS*	mmseqs_cdd	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0023	shell	direct	high	206	0.995	GCA_003351585.1_01478
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1469086	1469526	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	15462	15902	GCA_003351585_1_1_1402	GCA_003351585_1_1_1402	+	1848871	.	PFAM:PF06892.10	CII-like-transcriptional-activator	MEMKKVIIEMIDRIPGGRSAVAGFLGFSEAEMNNRLYHTKGQHFKNEELIALQLEYGCTDFIDELCRLAGGRFVPDVAEDELDKVELANLQLHELSARGLLFAVLEKALEDGEITSQEEDKIRQALSKHLAATQHSIECAIVLHKK*	phrogs_hmm	nonviral_gene	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0024	shell	direct	high	440	0.998	GCA_003351585.1_01479
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1469594	1469824	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	15970	16200	GCA_003351585_1_1_1403	GCA_003351585_1_1_1403	+	1848871	.	PF14090.6	Helix-turn-helix domain	MENINPNEKTSQTQNGKILKALLNGERLTQLDAYTRFNCTRLGARIYDIKQLGHKIEKQMVVVASGKRVAEYRLVV*	hhsuite_tools	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0025	cloud	direct	high	230	0.996	GCA_003351585.1_01480
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1469826	1469984	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	16202	16360	GCA_003351585_1_1_1404	GCA_003351585_1_1_1404	+	1848871	.	.	hypothetical protein	MERLFDHEFVASLSDREKFIAYEGIKQQLIEQGASQEEYDRVTEQAIEELGI*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0026	cloud	direct	high	158	0.994	GCA_003351585.1_01481
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1469981	1470760	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	16357	17136	GCA_003351585_1_1_1405	GCA_003351585_1_1_1405	+	1848871	.	pfam13730	Helix-turn-helix domain. 	MSMRLMVQAMNCEVGNPARKLVLLKLADNANDDGICFPSYQYIADKCEMSKRSAISHIDDLIKMGFVTKKARKNKDGSSANLYLLHLEQGSEKSALGGENISLGSEKSALGGSEKSAPITSHSFNLSINRVSDDENSANAERTDENKKTSKREKISVDYQGVMDAWNKVFNGSPIHLLKTLSQERQKAILKVAKAMLETPDVESCSVEVFTGYFQDFLSQANSRANKFFFGGPNGDGWVAKFDYIMKPKTFLNTWENSL*	mmseqs_cdd	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0027	cloud	direct	high	779	0.999	GCA_003351585.1_01482
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1470757	1472130	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	17133	18506	GCA_003351585_1_1_1406	GCA_003351585_1_1_1406	+	1848871	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MSNSMYEIEYGLISSMLAAGLTPQAREVMSWLEPEMFATFQLGALYGNIRKQARKDDLIDILLLAQDYGENFANLAELASGYAYSGNILGYAKKVHSAWVNRTAQQALLKMAGELANAKEEQVNQITQNALNQIQKLLVSKTEIKPIAMGELVDSYVDVLEKRSKSDFKERLLYTGIEAVDNILGGINSTDIVIVAGRPGTGKTEFSLTVTRNIAKNHGSVLFFSLEMGNFQLVDRLLSATGGVSVKKLRNPAELDEGDYHRLTSALKEVRSQDVYFVDRGGLSADEICAITENHISEKGSPSVVVIDYLGLMNHKQERGVNLTQAVANSMSKLKAFTKNFNIPIILLCQLNRDVDSRAVKRPANSDLRDSGSIEQDASQIIMLYREGAYKADCDNPYSEAIVTKNRFGGLGTAYMKFDRGHFLDCDQAQAYQFINEKPQQQAKTYAAKSYGKGALQ*	rep_hall_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0028	shell	direct	high	1373	0.999	GCA_003351585.1_01483
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1472127	1472351	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	18503	18727	GCA_003351585_1_1_1407	GCA_003351585_1_1_1407	+	1848871	.	.	hypothetical protein	MTSYKCPKCGAELEDFYTPDYFISSSEWDDDRFRCNGHLIEPIPFPQVSKDSVVNRTKSCGYFGLEDLGVEYKE*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0029	shell	direct	high	224	0.996	GCA_003351585.1_01484
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1472348	1473271	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	18724	19647	GCA_003351585_1_1_1408	GCA_003351585_1_1_1408	+	1848871	.	PFAM:PF02384.15	DNA-methyltransferase	MSFEEHNNRKKANKFAEYITGESLRRYLAGKVEKYLGKNPSVFDGAAGSGQLEQFIQPSKFIAVEIQAESCAALANNYPDAEIHNTSFFLYQSEPKSDCVVMNPPFSLKFKELAEEEKAAIQADFPWKKSGVLDDVFMLKGLANAHRFGFFIMFPGIAYRNTEKTLREVIGNQLVELNLIQNAFEDTPISVLFLVVDKTKSDNKTYRELYDCSTNKIINADEWLINSDKWDTVSPPEPPKEKVDPMKLELMSQAQLKEQVRTQVQFSRLVFDLEGWPREEFEKFCDEVCALIQEEKKSNRFLFGWGE*	phrogs_hmm	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0030	shell	direct	high	923	0.999	GCA_003351585.1_01485
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1473276	1473695	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	19652	20071	GCA_003351585_1_1_1409	GCA_003351585_1_1_1409	+	1848871	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPTDDKKPLVVKIQPITRSLEQNSKLHALLSDISKQCEFNGKKRDIDTWKMIMVSAHKIATGGQAEMVIGLEGEVINLRESTAQMSVKRLASLIEYITSWGVQNGVRFNDRWGFK*	mmseqs_cdd	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0031	shell	direct	high	419	0.998	GCA_003351585.1_01486
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1473692	1473784	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	20068	20160	GCA_003351585_1_1_1410	GCA_003351585_1_1_1410	+	1848871	.	.	hypothetical protein	MKRLNDDEILELKIVLFIVAVWGMFNMVVS*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0032	shell	direct	moderate	92	0.989	GCA_003351585.1_01487
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1473784	1474326	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	20160	20702	GCA_003351585_1_1_1411	GCA_003351585_1_1_1411	+	1848871	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKVCGKAFIKTLSSTQKVCSPECAIKLARDNAQKAQERAEKKKQRERKAKLKSRSEWLKEAQSVFNKFIRLRDKDQPCISCGRYHQGQYHAGHYRSVGACPELRFCELNVHKQCAPCNDHKSGNIIEYRINLINKIGADKVAWLERQDHEPKKYTIEDCKAMIKYYKAKIKELT*	common_virus_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0033	shell	direct	high	542	0.998	GCA_003351585.1_01488
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1474323	1474694	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	20699	21070	GCA_003351585_1_1_1412	GCA_003351585_1_1_1412	+	1848871	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MNIDVISVEFGYWATPRYETEFPRVAAGFAEMKCDARYAEKYRMRPISDELGMEIDGYLGVIREVTPELYDVFVLTYIKRWEKQEIWRYLHISRREYFSRLKTVKTSLLLLLSTEGKQCLFIA*	phrogs_hmm	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0034	shell	direct	high	371	0.997	GCA_003351585.1_01489
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1474794	1474976	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	21170	21352	GCA_003351585_1_1_1413	GCA_003351585_1_1_1413	+	1848871	.	COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family [General function prediction only]. 	MHSGDLIKELKANGCYFVRHGKGDHQIWFSPKTGKRFPVPHPKQDLAIGTLKSIKKSAGL*	mmseqs_cdd	nonviral_gene	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0035	shell	direct	high	182	0.995	GCA_003351585.1_01490
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1475008	1475457	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	21384	21833	GCA_003351585_1_1_1414	GCA_003351585_1_1_1414	+	1848871	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MIFTVGVETPENENQSYGMIVPALCQLDYGCFSAADDVDDLLPMVTEAITMMLEAMVEDGFDLTTLKDKGVTHYKADPEYADFDTWLLVDVDISEYLGKKQRINVSLPEYLLTRIDRRVAAMGNYYKDRSHFLANAAHRELHAHSDKEM*	mmseqs_cdd	nonviral_gene	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0036	shell	direct	high	449	0.998	GCA_003351585.1_01491
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1475756	1476385	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	22132	22761	GCA_003351585_1_1_1415	GCA_003351585_1_1_1415	+	1848871	.	PFAM:PF04383.12	KilA-protein	MTNLTILKTSIRQSDNLYSLNDLHVASGSENRHKPSLFMTNQQTKDLIAEIDNSSVAGNPASVKIVRGGRNPELQGTWVCEELVLSYAMWISPKFHLIVLRAFLAMHRNQPQQLALPEPEKKYTFEFTEYELEQLVWLWCGHKQMNTLLGDMIKPLETIGSYFTGMVISHHQEYRRQYKNTLPTIQKLIAPFKASNQINWERAKNLIAQ*	common_virus_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0037	cloud	direct	high	629	0.998	GCA_003351585.1_01493
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1476615	1476914	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	22991	23290	GCA_003351585_1_1_1416	GCA_003351585_1_1_1416	+	1848871	.	.	hypothetical protein	MYYIAVLAHSKRKKEFYSPDRKRSGLFCWWNMNITLGDTIKIDGEEVPEYLLKALYECLKNKYAFLANNSICSDVIQAERLSVNGLKIPLDAITYPWNK*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0038	cloud	direct	high	299	0.997	GCA_003351585.1_01495
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1476892	1477371	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	23268	23747	GCA_003351585_1_1_1417	GCA_003351585_1_1_1417	-	1848871	.	.	hypothetical protein	MNKARISRQQILNNIPEQYRHYFNIVILDIAQDIYPLFKNFTDAVNILCKHAQINKKVDIFFTSSKSNGIVSSDCLTLQYQIHPEAVHVYYNGCIFYDLAKANLYPREIQIAAFLEELAHTYMNISDEILVKKVVAWMYEGIHYNENTEQYEPIYSKDK*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0039	cloud	direct	high	479	0.998	GCA_003351585.1_01496
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1477452	1477835	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	23828	24211	GCA_003351585_1_1_1418	GCA_003351585_1_1_1418	+	1848871	.	TIGR01594	phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]	MPKKLGGNMPIKEPDVWALIWSWLQINLSSSSIQSALWALFISILRLGFMRKKPSFRYVFIDAAMCASIAGVAVPICTHIFGHSEYSSFLGTMIGFVGTEKIREFLFKFINRRIEKDDNDDFRSDVQ*	mmseqs_cdd	nonviral_gene	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0040	shell	direct	moderate	359	0.935	GCA_003351585.1_01497
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1477801	1478403	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	24177	24779	GCA_003351585_1_1_1419	GCA_003351585_1_1_1419	+	1848871	.	PDB:3WH1_A	Chitinase-	MTMMISEVTFNKIFPHAVKGVYQAISEQIEKAGCVTKMQQAMFLAQCGHESGGFTRFKENLNYSWSGLSQTFRKYFPDPLTAKRYERKPELIANRVYANRLGNGDEKSGDGWKYRGRGLIQITGKDNYAAFRKWLGRDIEPEDIASNLDLSVKAAVWYWKLCELADLNSVEKVTRRINGGLNGIDERCKLYRALMVTDND*	common_virus_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0041	shell	direct	high	602	0.998	GCA_003351585.1_01498
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1478396	1478719	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	24772	25095	GCA_003351585_1_1_1420	GCA_003351585_1_1_1420	+	1848871	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MTKYIYIALGVVVVVLFGALCYQSSVIDELNITTKQQAQTIQQQEDANKALTIALQQERDAVIEQQERNDEIERIATEHAESVKTIIKTQPCAHTRLPQSVLDRLYK*	mmseqs_cdd	nonviral_gene	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0042	shell	direct	high	323	0.997	GCA_003351585.1_01499
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1479223	1479684	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	25599	26060	GCA_003351585_1_1_1421	GCA_003351585_1_1_1421	+	1848871	.	PFAM:PF07278.10	terminase-small-subunit	MKDYYSISKMAAIAGCDRRTMSAIVGHVKPEKETTNFKGYSFEQILKLLIEGTRPKNVDELSPSDQLAYWNAQLKQLEYKKRRGEVCEVEDASRQMSIIVKTMLQPQETLADRAEVAGMPINWVIWIQKEVDKNRDESADLILEDETDVCESE*	phrogs_hmm	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0043	cloud	direct	high	461	0.998	GCA_003351585.1_01500
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1479665	1481785	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	26041	28161	GCA_003351585_1_1_1422	GCA_003351585_1_1_1422	+	1848871	.	CDD:COG5525	Large-Terminase	MYAKASDIRKDLAEMIKAPNRMKVSEAVSQYMRVPLGGGSFVRWDKDRTPYVIEPMDCLNSREYDAVIFVGPARTGKTIGLIDGWITYAIICDPSDFLLVQLTQEKASEHSRKRLDRTFRCSPEIAKRLSPRKNDNNVHDKYFRAGNLLKIGWPSINVLSSSDYKYVALTDYDRWPDDVDGEGDGFSLASKRTTTFMSAGMTLVESSPGKDIVDIKHHPKTTHEAPPTTGILSLYNRGDRRRFYWQCPHCKEWFEPSMANMVGYRNDTDYVKASENARLQCPHCQSLVDPDKKRALNIGGKWLKEGQTIDKDGIIHGEGRNSRIASFWLEGPAAAYQTWAQLTYKLLTAEHEFEMTGSEETLKAVTNTDWGLPYLPRSALEQRRSDELMERREETEKRTVPYGCRFLLAAVDVQGGRNRRFVVQIVGYGENSERWLIDRYNIKSSMRSNADGESLQIDPSAYPEDWDLLISDVLNKQYRIEGLEGGFMPILAMAVDSGGEDGVTDNAYKFWRRCKRDGLSKRVYLVKGDSTKRQKLISRTYPDNTSRSDRHAKARGDVPLYLLQTDQLKDRISNALSRETVGANYIHFPAWLGEWFFDELTYEERGQDGKWRKPGKGNNEAFDLFCYAHAIAILRGYERIKWGDEDNVPYWAKLPSVNPNVIRKESSAPKEETESAVEIEQVKPQPKPKTKSNWLNGGGSKKGGWL*	hallmark_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0044	shell	direct	high	2120	1.0	GCA_003351585.1_01501
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1481909	1482427	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	28285	28803	GCA_003351585_1_1_1423	GCA_003351585_1_1_1423	+	1848871	.	COG3646	Phage regulatory protein Rha [Mobilome: prophages, transposons]. 	MQLTNPENFKQFVQNKEAKTITTSETVAKVFGKYHKHVMRDIREILEAGDDEFNRTNFGLVEYIDKKGEKRPMFEMTKDGFMLLVMGYKTKKAMAIKIAYIKAFNFMQDQLLSSNMTLLEQYYQALGEHKAEKQLASVCGKALNEWKGKKPLLEATLKIFEDKLQIELPLLD*	mmseqs_cdd	nonviral_gene	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0045	cloud	direct	high	518	0.998	GCA_003351585.1_01502
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1482442	1482687	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	28818	29063	GCA_003351585_1_1_1424	GCA_003351585_1_1_1424	+	1848871	.	.	hypothetical protein	MRFFIGAKMAIYDRDELEEKIRTLDEKIENAQSQVSFNGRSVSYQVSEWTKQRDRYQQMLNELLAETRQRVKRHRIKYARF*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0046	.	unmatched_CDS	none	0	0	.
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1482785	1484191	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	29161	30567	GCA_003351585_1_1_1425	GCA_003351585_1_1_1425	+	1848871	.	CDD:COG5511	Major-Capsid-protein	MPNRTHKAKRESQGANVSTKQSAVSLREQARALDQNHDIVIGILDKMEERVIGSRGIHIEPQPLNLSGDVDEDLAEQIRKKWAEWSVRPEVTGQFTRPELERMLLRTWLRDGEVFIQLVRGSVAGLTHSTDIAFSLEALEPDFVPMNTLDTANVIQGIEINAWRRPVSYRVYMDNPQENNRTFGRVKTVPAENMLHLAFKKRLHQLRGVSMLHGVIVRLADLKDYEESERVAARIAAAFTMYIKKGDAALYGDNENYSADSPERDFEIAPGAIIDDLKPGEDIGLINSNRPNTNLEHFRNGQLRATAAGTRSSYSSIARDYNGTYSSQRQELVESFEGYSVLQDTFVAHISRPIYREWLKMAIVSGEIEVPVDIDPASLYNAVYSGPVMPWIDPIKEAQAWKERIKGGLATESQAVRASGSNPAEVKRRRKVEVDENRELGLNFDTDLTNTPLNERASPLKDGENLDE*	hallmark_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0047	shell	direct	high	1406	0.999	GCA_003351585.1_01503
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1484265	1484411	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	30641	30787	GCA_003351585_1_1_1426	GCA_003351585_1_1_1426	+	1848871	.	.	hypothetical protein	MSILKTILSIIKEFRRMNEQLSSLRFWGLWLLGFLIASAIFINAIKWW*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0048	cloud	direct	high	146	0.993	GCA_003351585.1_01504
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1484402	1486390	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	30778	32766	GCA_003351585_1_1_1427	GCA_003351585_1_1_1427	+	1848871	.	PDB:6WKK_D	Major-Capsid-Protein	MVVTMKWYNINAKSTDTADISIYDEIGGWGISAQQFAKDFKALGNNLKQINLHIHSPGGDVFDGIAIYNLLKNHPANVTVYIDGLAASMASVIAMAGNEVIMPENAMMMIHKPWGIQGGDAEDMRKYADLLDKVENTLIPAYASKTGKTPEELAEMLSAETWLNGKECVEQGFADKLAEPLVAMASIKSRKLEDFENMPKAMKDMLFKPQGNAGASAPQATPTPAQPAPTEPVNQAPTAPVDNTAQVQAELNKRNADIKAVFAPFGTTHNDLLVECLGDLSITADQAKDKLLAKLGAGTTPSAAVTPYADNGNIVGDSVKQSLLARAGIDKDKVNAKDNAYNAMTLRELARASLVDRGISVSGQNAMSMVGLAFTHSSSDFGQILIDVAHKSLLKGWETAAENFDQFTSRGTLTDFRAAKRVGLGDFGYLPQVGEGEEYTYGTIGDEGASVALATYGQLFSITRQAIINDDMHLLTKIPEKMGQAARATIAKLVFALLTGNAIAQDGKKLFDASHKNSFDNAALDVTNIDKAIQMMNGFVNTRGEPLAIEPDFMLLPTSLYTRAKQVLGSASVEGADINSGIINPIRDIVPTVKSARLQVADPKSWYLINKEAIEVSYLDGIDTPYMEQQQGFTVDGVSTKVRIDAGVNVIDYRGIVKVTNK*	hallmark_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0049	shell	direct	high	1976	0.993	GCA_003351585.1_01505
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1486469	1486792	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	32845	33168	GCA_003351585_1_1_1428	GCA_003351585_1_1_1428	+	1848871	.	COG5471	Predicted phage recombinase, RecA/RadA family [Mobilome: prophages, transposons]. 	MAKNYMQDGNTVRFTAAAAVKSGDVVMLENLVAIAVADVEKSAVGVGLTTGVFTVKAKAADDIKQGAIVYWSATDGATTTAGTNKRLGIAWHASGATVETVDVKINA*	mmseqs_cdd	nonviral_gene	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0050	shell	direct	high	323	0.997	GCA_003351585.1_01506
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1486773	1487084	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	33149	33460	GCA_003351585_1_1_1429	GCA_003351585_1_1_1429	+	1848871	.	pfam13856	ATP-binding sugar transporter from pro-phage. Members of this short family are putative ATP-binding sugar transporter-like protein.	MSRSTLSPFDDALAQADKVISDVMMSVYVINGKKYKAVLDESPKLMSGNYTDDYLINGTTRTLTLFKASGYKPKLGDIIISSTEEYVVRGFSFEDGKIVLQLE*	mmseqs_cdd	nonviral_gene	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0051	shell	direct	high	311	0.997	GCA_003351585.1_01507
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1487087	1487617	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	33463	33993	GCA_003351585_1_1_1430	GCA_003351585_1_1_1430	+	1848871	.	PFAM:PF06763.10	minor-tail-protein	MAVKIEGMAALQANIQKLANQVAPKAAAKAINKVARSAIKNGTKNVSKEIHVPAKLIRKRTRLSQKATANRPVAKIRVDRRNLPLIRLLENPRRTMRASKGQIRIGKYQIQRGFIQTLANGRKHVMQRQGKERYSIDVVKIPLSRPLTTAFHNELKDYSSQIKVELTRELSDILKK*	hallmark_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0052	shell	direct	high	530	0.998	GCA_003351585.1_01508
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1487626	1488036	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	34002	34412	GCA_003351585_1_1_1431	GCA_003351585_1_1_1431	+	1848871	.	PFAM:PF06141.10	Minor-tail-protein	MLIHKKIRHQVSDMLKSSIKGVENIYSGRPLFIDIDQEKTAIAVFLDEISCEEVDLCHHEYTAALNIAIYLKTALGDDALDDIADKIKERLSVAISNDELSENISEMTLISYEYEQDTTNRTWFVSNLKYQIKYED*	hallmark_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0053	shell	direct	high	410	0.998	GCA_003351585.1_01509
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1488039	1488689	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	34415	35065	GCA_003351585_1_1_1432	GCA_003351585_1_1_1432	+	1848871	.	PFAM:PF08813.10	Tail-tube-protein	MPTQTTPFQGTKFYLGTGLTEGKAVTAVTVKPNATITSAGHGAKVGDFIKLTGLGSLDGYYPVKSVTNEKITLADEVDWSNQDAPTSFTTAKVATVKWSSNFCAIKNIEGDGDTLGEEDITTMCSEGTETEAGEIEYGSIKLTFFYAPATPMQQDLRKKFYGKETFPWMMVLKNNQGSLYGTGFIQTSPNFSGEVKGKFESGVTIKKAKRDYHLPA*	hallmark_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0054	shell	direct	high	650	0.998	GCA_003351585.1_01510
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1488848	1488964	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	35224	35340	GCA_003351585_1_1_1433	GCA_003351585_1_1_1433	+	1848871	.	.	hypothetical protein	MQYGLWETTLAYLVLGVCFIIAWRLPNIINSIKNKGDK*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0055	shell	direct	high	117	1.0	GCA_003351585.1_01511
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1488964	1489371	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	35340	35747	GCA_003351585_1_1_1434	GCA_003351585_1_1_1434	+	1848871	.	PFAM:PF16462.4	tail-assembly-chaperone	MNLREKLLANKPKITPIIINGENYYIREFTVGEMNQALYGQQQELIRIAEEQGITLAFNDEITLTEQLAKIYDPNRLTRTLVMRLCDQDGKNLFDMDNPDDLTALSKLDKVVFEQLTQAIVEDEPKNSQAEESSK*	phrogs_hmm	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0056	shell	direct	high	407	0.998	GCA_003351585.1_01512
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1489416	1489640	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	35792	36016	GCA_003351585_1_1_1435	GCA_003351585_1_1_1435	+	1848871	.	pfam13227	Protein of unknown function (DUF4035). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 67 and 93 amino acids in length.	MPERHLQEYEMFYQEQPFGLWREDYRTAQVSHLLAMINRDPKSKPPELSDFMPFYQEKMDDEDDDGVADYLANR*	mmseqs_cdd	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0057	shell	direct	high	224	0.996	GCA_003351585.1_01513
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1489709	1490092	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	36085	36468	GCA_003351585_1_1_1436	GCA_003351585_1_1_1436	+	1848871	.	PFAM:PF15781.4	toxin	MKQEWEVILQDPLLNWLETLAEDDVLKIYAALELLSTEGPQLSRPYADTLQGSKYTNLKELRVQSKLSVFRLFYIFDPVRQAIVLCGGDKKGKKEKLFYKEMIALAEQTYDDYLSELTKEQENEREI*	phrogs_hmm	nonviral_gene	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0058	shell	direct	high	383	0.997	GCA_003351585.1_01514
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1490076	1490378	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	36452	36754	GCA_003351585_1_1_1437	GCA_003351585_1_1_1437	+	1848871	.	pfam13744	Helix-turn-helix domain. Members of this family contains a DNA-binding helix-turn-helix domain.	MSVKFKDLMNNLPAEKQAKVKAMADDMRMELQLYRIREELELSQKQMAEALSISQPSVVALEKRGNDIKLSSVKRYIEAMGGVLNLSVELPTGKTVTFNL*	mmseqs_cdd	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0059	shell	direct	high	302	0.997	GCA_003351585.1_01515
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1490391	1490630	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	36767	37006	GCA_003351585_1_1_1438	GCA_003351585_1_1_1438	+	1848871	.	.	hypothetical protein	MLRDFIQFTAKCFFILLIALGTLFLLFAVDFIYILAFIGVYVAIFATCLVVAIIKENNRIKKLRIVEQDKNRVKYVIIN*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0060	shell	direct	high	239	0.996	GCA_003351585.1_01516
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1490682	1492610	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	37058	38986	GCA_003351585_1_1_1439	GCA_003351585_1_1_1439	+	1848871	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MSSLGSLNILLSLDSIQFNQALDKSSYQTQKFAKQFELNFTKAQAKAKQFSERTTQYLNNIEKAANTINKTTSRTFWAGIVSSGGSYLSSGISDVIKYADSYTELQNRIRLVTNSQTAMVAATESVFDISLKTNQAVGATAQIYQRFAQNADRLNLSQLQVSELTETVAKSVAISGASASAAEAALTQFGQALASGVFRGDEFNSVMEQTPGLATAIAKGLGGTTGELRIMAGEGKLTAKVLIEALEKARDSVDKDFSKRVLSLGDAFTNLQTAAIKTTGQLDQSLGITTKLAQGVDFLSQHLEGAASAATILLTSLSVSKLSQFTIEKSKATIATAKHTNELYKEAQAVYSQTQALRVQAQADIERLHAELQLAQSEKTRFALRERLNAQSQRVIALVRQEADAKRQLAVATSLAGQALNGLKGIMALLGGPIGVITLAAGALFYFGQQAKEARAAALDMTDVNNQLAESYDKLSEAALSLKITEQLDKIKDQYKKIEKLQDEMSTRQIGTDFDGFQVGGGLDEKEVDEFLNKISFAQEKAEKMKQVFDKMLSSMGQSFLRSGKNVEELKEKFRLLGIDGETADRVIAGLQNNLGKVGESAEEAADKTLDLSEAMKKLNDKSTTLARLSAAAWSICSILTR*	hallmark_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0061	cloud	direct	high	1928	0.999	GCA_003351585.1_01517
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1492580	1492954	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	38956	39330	GCA_003351585_1_1_1440	GCA_003351585_1_1_1440	+	1848871	.	PFAM:PF05100.11	minor-tail-protein-	MVYMQYLDAVNFAGGNKQADPTQEALSLFVIEQVATHKRDVISFTLALPMETDNAYISCRTITTICSWLYRGVECGYNGAAVADEKDQPTNDPKKDKCSGLVSGCALRNNVVNFGGFPSVDKLG*	hallmark_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0062	cloud	ambiguous	low	32	0.085	GCA_003351585.1_01517
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1492957	1493706	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	39333	40082	GCA_003351585_1_1_1441	GCA_003351585_1_1_1441	+	1848871	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MNEELKKSILKIAKELEPREMCGFVIFAGCELEFINCENIADDPENFFEVSPDDFLSAGMKGNIVALVHSHPGGEPVLSPADFQMQQNTELDWWLVCDGVIHVFPWVPPLLGREFIHGQTDCYTLFRDFYRLSGKEFPNFERDDYWWEDGFNLYMDHMEEQGFERLTDVKELQVGDVILIQVGSDVPNHAAIYIGDQMVLHHSPRRLSKRDLYDGYWLKHTHSLWRFKNWSQLNFTAALNNLEVNLSSM*	mmseqs_cdd	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0063	cloud	direct	moderate	689	0.919	GCA_003351585.1_01518
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1493808	1494257	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	40184	40633	GCA_003351585_1_1_1442	GCA_003351585_1_1_1442	+	1848871	.	PFAM:PF06805.11	tail-assembly-protein-I	MDNRYIERDVGYQLKDGTTVHITPVVAGAKKAGLFQTIAGAVLAVVGYTLGWTGIGAVVGNMGVALMLGGVAQMMTKTPTMQGQGKEAEKQKSTSFTNLSNMAAQGRPVPLAYGKIRTGSLIISQGVETYDVETAKTSEKPVGFRKGRM*	hallmark_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0064	cloud	direct	high	449	0.998	GCA_003351585.1_01519
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1494314	1499209	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	40690	45585	GCA_003351585_1_1_1443	GCA_003351585_1_1_1443	+	1848871	.	PFAM:PF13550.5	tail-protein	MGGGGGGGGHTPYEAPEFGRSKQAVRIVEIVSEGEVKGLVNGVQSVFLDNTPIQNKDGTYNFSNVEAEGRIGIQDQDILEGFNTSEKEISVGTQVRKNTPLTRTVSDGKVSRLRLTLGVQSLFSQNDQGDTHGASVTMNITIGQRVIPLTINGKYSSQYLRQIEIDNLPPTPFTVRVERIDEDSKSQRLQNNTIWASYTEIIEMRLAYPNTALVGIKFDSDYFSSIPNRTYDVYGIIVQVPSNYNPETRAYNGTWDGTFKTAWSDNPAWVLYDLLKNKRYGFGRRLGDFAVDKWALYNVAQYCDQLVDDGFGGKEPRFTCNAWITEQRQAYDVINDICSIFRAMPVWNGREFTVIQDRPADPVWTYTNANVDKEGFTYSYSAMKARHNEIHVEYANAQNNYEKDVICVSDDDLIRRYGLNVKKVTAFGCTSRGQAYRTGRWILETEKLETRTVTFTVGAEGLMHVPGDIILVADNDYAGTQLGGRVLSVANKVVTLDREVPFKSGEQFLYYNQDAQVTGIKVIDVLDGNRIVLDKAPTGLTEYGVWLRHGEKVQPQLYRALSIKEESKGKYTITALQHEPQKEAIVDSGAHFEPVSFSEVPDRYRIQNVDVAATDDGIRLSFEYFAKNESTVKYQIKLYRTFDGNRTLYKVYDDLTNTNISFTGLPDGDYTAEIRAKNGVGQLSEPVTKSFSVNFTIAELVTVSKLMGIDLNWRNPIFANTNAAIEIWVSKDNNFANARKLITLAYPTNSYSYTGLGAAETYYFWARMVSKDVAGKFTDAVEGVTERDATKIVDYIHGQINKSALSQELVKELTNTAETARTAIAGITSETQARIATLNAEANNRAKAIREEGLKLTQKIEAESRKATVALQEEVKARGTAINKLEQADKQQAKAIEQVTAKANSALSGIEVERKARAAADNAESKAREILTAKIGQHESSINQINQTIVRDRETSAQQVATLESAVRNIRVGGRNYLLDSSFKNGKWYKSQGSGSKATIDVDNGVLTISSDNATWKQYQIKGYAHKGGLNELVDSTTVTISFEVMTPDDNTGGGIKYWMNLRADRIDNTHGGSTNPIVINQTAAPSKWSRVSITGVATQPTNFRGWRFLLGVSTPGTVKFRNPKLEVGNVATDWTPAPEDLDQSELINAKFVDIRQVVTSETEARTVWQNNAISRINGVESNIANIQRSVTTATQSISEVNQHLNAKIDGISVGGRNLLLGTAIGLSGNGAKNYQNKTYNVTSNIDVSTLKTITLSCSVLTKGIKAGSGIRHFRAGAEVQLFYADGTNGWLSAYCNDVADFNGRISKTLTLSKPLSKLTYNKVQVRNIAEGEYKVDGIKLEVGNVATDWTPAPEDLEGAVGDLSADLNHYKSSQATKDQATSMQLTTLTARMTNAESGISKVEKAVSDAKSSTATQLNQLSAAFSKAKTDLDAKIAEEKTARSNADTAEAKKTSALTSRVANAESSVTQLSKTVADVSGKLSGTHTIKTQVVAGGRTAIAGIALGASSDGKTAESSVIVMADKFGVVKSATDGTVKNVFTVSNNQLALSGDLLADGSIIGRHIQANQEIRSPLISGGEIDISGNDGILRVGRTGNFLVRASSQNRGLVINNDQIIVYDDRGNVRVKIGRL*	hallmark_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0065	cloud	direct	high	4895	1.0	GCA_003351585.1_01520
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1499206	1499625	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	45582	46001	GCA_003351585_1_1_1444	GCA_003351585_1_1_1444	+	1848871	.	.	hypothetical protein	MIFIMLAIIAMAVMLWLFFLKRGKAKVPSQGIQTFDNVGNATFSTENRLFRYIGYRDLPIGNFSISVNTDGQVVFIPIILTSNNQELSHRVAISVDIPYISNGRISGNNFTGTVKSPMDFRYKGNLRTKPLIRIFYGVY*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0066	cloud	direct	high	419	0.998	GCA_003351585.1_01521
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1499625	1500221	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	46001	46597	GCA_003351585_1_1_1445	GCA_003351585_1_1_1445	+	1848871	.	.	hypothetical protein	MFGFAGFTDVNDGFLSMSLQRRGNAIFNGNLAEISVADNDIVVISGCNGDVAQLKKVGGKIILYSPNAKYIDYMIFNTSTAKSSGYGVETYDSNGRVIFSSNHKFLRPIKGIDTNLNKGAFTETQPSGSKYGVILSNYGFTLNINPDFCRRVMRSVRLDGNIKFNVVNYDDRGAGRIGMSYNDNSYFFNAIIVDITNY*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0067	cloud	direct	high	596	0.998	GCA_003351585.1_01522
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1500232	1500570	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	46608	46946	GCA_003351585_1_1_1446	GCA_003351585_1_1_1446	+	1848871	.	.	hypothetical protein	MKYIDKKIEESRTGASASYHVVSGLQTEYTSGNTFVTISSYVSKDKKEEGKESLSVNTFTIPGVPDWDAIPYEWALSELVKTQPEDFAPENYHGYINPYIFAGGKIKDLEVK*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0068	cloud	direct	high	338	0.997	GCA_003351585.1_01523
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1500916	1501233	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	47292	47609	GCA_003351585_1_1_1447	GCA_003351585_1_1_1447	+	1848871	.	PDB:1Z19_B	Integrase	MATIIKNGKRWHAQVRKFGVSKSATFLTQADAKKWAEMLEKQLESGKYNEIPDITLDELIDKYLKEVTVTKHGKREERIRLLRLSRTPIAAISLQEIGKAHFREW*	common_virus_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0069	shell	direct	high	317	0.997	GCA_003351585.1_01524
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1501270	1501503	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	47646	47879	GCA_003351585_1_1_1448	GCA_003351585_1_1_1448	+	1848871	.	.	hypothetical protein	MRERSSLSALMAKTIEWDFITENPLKYLEKPKAPAPRTRRYNEHEIERLIFVSGYDVEHIEPPKTLQNCTGLHFFLL*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0070	shell	direct	high	233	0.996	GCA_003351585.1_01525
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1501512	1501682	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	47888	48058	GCA_003351585_1_1_1449	GCA_003351585_1_1_1449	+	1848871	.	PDB:1Z19_B	Integrase	MRAGEIASLTWNNINFEKRTAFLPITKNGHSSTAPLSVKAIEILQHLTSVKTESDP*	common_virus_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0071	shell	direct	high	170	0.994	GCA_003351585.1_01526
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1501692	1501907	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	48068	48283	GCA_003351585_1_1_1450	GCA_003351585_1_1_1450	+	1848871	.	.	hypothetical protein	MEARQLDHNFRKLKKMEGLENANLHFHDTRRERLAEKVDVMVLAKISGHRDLSILQNTYYAPDMAEIAQRL*	.	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0072	shell	direct	high	215	0.995	GCA_003351585.1_01527
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1501954	1502721	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	48330	49097	GCA_003351585_1_1_1451	GCA_003351585_1_1_1451	-	1848871	.	PDB:4U7B_B	Mos-transposase	MARSVFFYHLKTKNDKNAALSQEIASIYHDNHGNYGYRRVTFKLRETIKINHKKVQRIMQWLGLKGKCKTQKYRSYQGEVGHIADNLLQRDFTATQPNEKWTTYITEFKCAEGKLYLSPIKDLFNNEIIAYDLARSPNFEQITRMMKQAVARLEGAKPILHSDQGWQYQMIGYQNILRENGIQQSMSRKGNCLDNSAMESFFGRLKTECYYGKRFETFEQLEKTIHEYIHYYNHERIQGKLKGLSPVNYRTQSLN*	common_virus_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0073	shell	direct	high	767	0.999	GCA_003351585.1_01528
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1502772	1503281	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	49148	49657	GCA_003351585_1_1_1452	GCA_003351585_1_1_1452	-	1848871	.	PDB:4U7B_B	Mos-transposase	MTKYNFLFKQQVIEFYLQNGKNSSLTRRHFQLAETTLERWINQFNHSGINGLALLGKKRNYSPEFKLNVIQAVKNGKFSAEAACLHFGIANSGIVSQWLQAFEKQGINGLIPKPKGRPTMKLQYPKMPPKPKTREEELELENLRLRAENAILKKLQELNQQKMQKKPLS*	common_virus_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0074	shell	direct	high	509	0.998	GCA_003351585.1_01529
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1503373	1503531	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	49749	49907	GCA_003351585_1_1_1453	GCA_003351585_1_1_1453	-	1848871	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MADLQQLIKNIEQWAEDRNLIEGSTPQKQFIKLMEEFGELCSGVAKFILFET*	phrogs_hmm	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0075	shell	direct	high	158	0.994	GCA_003351585.1_01530
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1503586	1504056	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	49962	50432	GCA_003351585_1_1_1454	GCA_003351585_1_1_1454	-	1848871	.	PFAM:PF05840.12	nicking-at-origin-of-replication	MTKRCDQPICIEYEECEPNKYGEIRKKIVGVKNRFTEKKIITKLKNWVIKSAKSALGSTALDSESTETNKAHRAAWTCVNNCNRSKIEQQANLLMLPIGSPLKPSQIDLLMRHGRLRLNDYRWICCENDEVFIKEEKIPLAQAFGWGESLGDFRVN*	phrogs_hmm	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0076	shell	direct	high	470	0.998	GCA_003351585.1_01531
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1504095	1504304	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	50471	50680	GCA_003351585_1_1_1455	GCA_003351585_1_1_1455	+	1848871	.	pfam06074	Protein of unknown function (DUF935). This family consists of several bacterial proteins of unknown function as well as the Bacteriophage Mu gp29 protein.	MPYLQINVDPNIAPHRIPYFEFDTKEYEDLSVFADAIPKLTGIGVQISESWVRDKLGIPEPQEGSAKEI*	mmseqs_cdd	common_virus	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0077	shell	ambiguous	low	3	0.014	GCA_003351585.1_01532
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1504301	1505002	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	50677	51378	GCA_003351585_1_1_1456	GCA_003351585_1_1_1456	+	1848871	.	PFAM:PF06152.10	minor-head-protein-and-DNA-pilot	MKRREIDKPDDSSEFLVEVERPADKQGNREKTVGFKLPDGTIRVTDKGFDYNVGRLNYKPNLDLYPEKLAHAFAKVEMKGGEFKHDFELLAKHMAEMKQTLSPEGKKLTADQMLQVRDSLTKNFKFAAGVLSAESKDLLKSKTGTVWLSDDTLIKQFNSRDGQDFGIDEYEALPDIINAPDKIVVDELGYQFYKDVNGKKLLAVLKVLSKEPQIFVQSFRLVSDKQWRKAFKE*	phrogs_hmm	hypothetical_protein	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0078	shell	direct	high	701	0.999	GCA_003351585.1_01532
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	CDS	1505276	1505812	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	51652	52188	GCA_003351585_1_1_1457	GCA_003351585_1_1_1457	+	1848871	.	COG3101	Elongation factor P hydroxylase (EF-P beta-lysylation pathway) [Translation, ribosomal structure and biogenesis]. 	MEHKLEDIIAIFNQCFEEEYNTRLVKGGEEPIYLPANDEVPYNAIYFARGFYSSALHEIAHWLVAGKERRKLEDFGYWYEPDGRSEERQRDFEKVEVKPQALEWILATAAGFRYFASADNLNGNPGDTQPFKQAVYEQVKICAEKGLPKRAEMLRKALVAFYGTEDEIDLAKFDVARI*	mmseqs_cdd	nonviral_gene	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_CDS_0079	persistent	direct	high	536	0.998	GCA_003351585.1_01533
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1625370	1626389	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	1	1020	GCA_003351585_1_1_1561	GCA_003351585_1_1_1561	-	1848871	.	TIGR01036	dihydroorotate dehydrogenase, subfamily 2. This model describes enzyme protein dihydroorotate dehydrogenase exclusively for subfamily 2. It includes members from bacteria, yeast, plants etc. The subfamilies 1 and 2 share extensive homology, particularly toward the C-terminus. This subfamily has a longer N-terminal region. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]	MYQLFRHGIFQMDAEKAHNFTIQCLKLAGNPVFQPILKSLIHAPKGFPKTVMGVNFPNPIGLAAGADKNGDAINGFGTLGFGFIEVGTVTPIAQDGNAKPRQFRLIEAEGIINRNGFNNNGIDYLIENVKNARYKGVIGINIGKNKFTPLEQGKDDYIFCLNKAYNYADYITVNISSPNTPDLRQLQYGDYFDDLLRSIKDRQAILANQYNKYVPIAVKIAPDLTESELMQIADTLVRHKMDGVIATNTTISRDTVMGMKNAEQQGGLSGKPLQHKSTEIIKRLHQELKGQIPIIGSGGIDGLQNAQEKIEAGAELLQVYSGLIYHGPKLVKELVKNIK*	mmseqs_cdd	nonviral_gene	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0001	persistent	direct	high	1019	0.999	GCA_003351585.1_01636
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1626620	1626826	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	1251	1457	GCA_003351585_1_1_1562	GCA_003351585_1_1_1562	-	1848871	.	.	hypothetical protein	MLTQIAQNRGVPFEILVEKVIEKSAQFAVVIGIIIGQLQAFEDRLLTFKTPEELTALEQEIEQWQFPT*	.	hypothetical_protein	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0002	shell	direct	high	206	0.995	GCA_003351585.1_01637
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1626786	1627232	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	1417	1863	GCA_003351585_1_1_1563	GCA_003351585_1_1_1563	-	1848871	.	PFAM:PF14301.5	tail-protein	MTIYYKNGFFDDTDGGFVPESAVEISQETYLELLNGQSRGKQIIADKTGYPVLIDPQPSAAHVLNLDTLTWEISAEKQTALFAQQKEGLLNKLANKADQLKNGLLAGYPQTEIESFYRQEKEALAWQADNSTETPNAHTNRPKSWCAV*	phrogs_hmm	hypothetical_protein	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0003	cloud	direct	high	446	0.998	GCA_003351585.1_01638
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1627305	1627646	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	1936	2277	GCA_003351585_1_1_1564	GCA_003351585_1_1_1564	+	1848871	.	COG4679	Phage-related protein  [Mobilome: prophages, transposons]. 	MHNMPFSVHILTQVRKAISKMPQSLQEKIYFDLDDLETYGNELQEPKVRDLGNGLKELRTTAKEGIARSFFFFHIGKQIFVVHAIQKKTQKTPKQDLMLAKVRMKQLKDQLKP*	mmseqs_cdd	nonviral_gene	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0004	cloud	direct	moderate	332	0.971	GCA_003351585.1_01639
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1627657	1627947	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	2288	2578	GCA_003351585_1_1_1565	GCA_003351585_1_1_1565	+	1848871	.	PFAM:PF10078.8	transcriptional-regulator	MEKLEFISLENLKHDLIAQDPTFEIRLVVHKQQQAIVQQLKADRLAKHLTQQDIANLTGIKTQNISRLERGMVMPNADTLIRYAQALGGTFQYVPA*	phrogs_hmm	hypothetical_protein	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0005	cloud	direct	high	290	0.997	GCA_003351585.1_01640
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1628247	1629239	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	2878	3870	GCA_003351585_1_1_1566	GCA_003351585_1_1_1566	-	1848871	.	pfam03406	Phage tail fibre repeat. This repeat is found in the tail fibers of phage. For example protein K. The repeats are about 40 residues long.	MKAFLHHLQNEAKLIISPIYCVVGEFALNEIARATLQQYGIVQLSSATNSDSETEAATSKAVKTAYDKAVEAKTTVDGKVGLNGNESINGEKSFENRIVAKRNIRISDSPHYVSRGDYLNIGANNGDCWFEYKSTNREIGTLRMHANGNLTYKRQKIYHAGAKPQFNTDIEGKPNTLAGYGIGNFKVEEFRGNLNELKTDGIYAITQASRSQNLPVSTSCHIQVIAGNDGAWCRQLAYVAYSTDMYERHQTSQAEDNWSTWVKLNDIEPVRELLSTKANISHTHNPRGQSNRLLSSFHESNNVEIGLCYQSSKLKYAMSIYLFTKLRLYF*	mmseqs_cdd	common_virus	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0006	shell	direct	moderate	954	0.961	GCA_003351585.1_01641
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1629272	1629727	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	3903	4358	GCA_003351585_1_1_1567	GCA_003351585_1_1_1567	-	1848871	.	pfam11041	Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	MSYAYEQAPARAGEVGKHVGQFRVINVYQLRKFFGFRNSPNALGFSQKRLGGAQWYRKRDPLSDSVRLSDDDYRFLIKCRILKNYQIGTLPNLIEACLFIFGEGCHIVDNYDMTVSISVPSASTSDFKKFAINHLDILPRQAGVQYLFNLT*	mmseqs_cdd	common_virus	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0007	shell	direct	high	455	0.998	GCA_003351585.1_01643
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1629740	1630840	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	4371	5471	GCA_003351585_1_1_1568	GCA_003351585_1_1_1568	-	1848871	.	PFAM:PF09979.8	head-maturation-protease	MKFTDKTTQAATQRTITKDGFLVVPATISKVGVFDYLATELGLKEDGIKKVARTEKSLFSDETIKSFENATLTVGHPKDGVNAKNWKQLSVGVVRNVKRVGDELTAEAWIYDESAIKTVQENGVEQLSCGYDCDIKPSTVQDADFEMSPMIGNHVAIVAKGRCGGSVKLADEDKTIMGKTAKILDAFLGAFGIKLSDEQKKQIEDEEKSGSEEGKEPKGGQPTEPKEKQSKPENKKDDDVEKEELEKRLKAKDEEIQQLKDAQAKRDAEVKQAAVLADAKTAFKEVNFADNSTVREIQESAVVAQGIFTKDEAAKLSDEEISGAYQTAKAVVAKLADERKSLGSILLGDAEPKAAPKIDFNKTYNS*	phrogs_hmm	nonviral_gene	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0008	shell	direct	high	1100	0.999	GCA_003351585.1_01644
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1630901	1631257	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	5532	5888	GCA_003351585_1_1_1569	GCA_003351585_1_1_1569	-	1848871	.	pfam10711	Hypothetical protein (DUF2513). This family is found in bacteria. The function is not known.	MKRNWDLIRSILLKLESQSEARGSLLPDGFTGFDSETVSYHFKLLQSAGLIEAIDYSSLNEMSLIARSLTWQGHELLDKIRNDTVWNSLKTTIKSKSLDLSLDAIKQVAQTIISQMLA*	mmseqs_cdd	nonviral_gene	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0009	cloud	direct	high	356	0.997	GCA_003351585.1_01645
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1631254	1631562	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	5885	6193	GCA_003351585_1_1_1570	GCA_003351585_1_1_1570	-	1848871	.	.	hypothetical protein	MRKEYTDDDLFKKNTARRHSGEKIKLSEYLMLWMYELLTKPVEFGMRDAVLYRIHKKFTDEIPFDDTVKEMDRLIGEAEKAESQSKSYDEIVDMLWPRDNKE*	.	hypothetical_protein	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0010	cloud	direct	high	308	0.997	GCA_003351585.1_01646
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1631876	1632532	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	6507	7163	GCA_003351585_1_1_1571	GCA_003351585_1_1_1571	-	1848871	.	PFAM:PF04233.13	Minor-capsid-component	MNALTAGNIQLIKSIRAQYLDKVQNAVMQAMVRGSLNKDLAAQIKDLGKTTEKRAMFIARDQSSKLNAALTQARHEEVGIKKYMWSASLDERVRESHAEKDGQIFEYSNPPADTGHPGHDFNCRCVQIPVLDTEQEKQIIEQYEVDKVKEAISPSQYRYHVGDMEQNPVAMEFVKKYNLSTKEAVSIRDYTTNSYAKINSQLREDKAAPSILMMAKVK*	hallmark_hmm	common_virus	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0011	cloud	direct	high	656	0.998	GCA_003351585.1_01647
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1632529	1632813	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	7160	7444	GCA_003351585_1_1_1572	GCA_003351585_1_1_1572	-	1848871	.	PFAM:PF06152.10	minor-capsid-protein	MTDDVEIALQQPQGSFFMDDAKGFQAISAKALMKVLENYEKSDRTSQAENIANGFVSRGDAQNHAEVSTNLKNQTGIDLSAYLRNSPNIAERVN*	hallmark_hmm	common_virus	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0012	shell	direct	high	284	0.996	GCA_003351585.1_01648
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1632842	1634173	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	7473	8804	GCA_003351585_1_1_1573	GCA_003351585_1_1_1573	-	1848871	.	PDB:8HDS_J	Portal-Protein	MNILDGIKSLALKLGSKQDQTYYARGLSLTDDLMQIEALWRDNWIANKVCIKRSEDMVRNWRDIFSNDLKSEQLDEFTKLERRLKLRETLTKALQWSSLYGAVGLLVVTDTINITSPLQPTERLKRLIILPKWKISPTGQRDDDVFSANFGRYSEYIITGGTQSVLVHHSRLLIINANDAPLSDNDIWGVSDLEKIIDVLKRFDSASANVGDLIFESKIDIFKIAGLSDKISAGLENDVAHVISAVQSIKSATNSLLLDTENEYDRKELSFGGLKDLLTEFRNAVAGAADIPVTILFGQSVSGLASGDEDIQNYHESIHRLQETRLRPVLEVLDTLLCNELFGGQPDDWWFEFLPLTVVKQEQQVNMLNTFATAANTLIQNGVVNEYQVANELRESGLFANISADDIEEMKNADELARNFEEPEGESTQVQASEDEQENGALI*	hallmark_hmm	common_virus	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0013	shell	direct	high	1331	0.999	GCA_003351585.1_01649
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1634175	1634558	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	8806	9189	GCA_003351585_1_1_1574	GCA_003351585_1_1_1574	-	1848871	.	PDB:4IDH_A	Large-Terminase	MEGFNAGGAVAYPEREYIKGKKNQDMFSNIKAQSWWALRDRFYKTYRAVKYGDVYPDDELISLSSKIKELEYLKAELSRPRVDYDNNGRVKVESKKDMKKRGIPSPNMADALVMCYAPTKPKSLLDL*	hallmark_hmm	common_virus	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0014	shell	direct	high	383	0.997	GCA_003351585.1_01650
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1634594	1634983	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	9225	9614	GCA_003351585_1_1_1575	GCA_003351585_1_1_1575	-	1848871	.	PDB:5OE8_A	Large-Terminase	MLADQIEMLSLQAFFDVQKTQIIGQNGSRFTFAGLKTNITSIKSMTGIDVVWVEEGENVSKESWDILIPTIREDGSQIIVSFNPKNILDDTYQRFVIHPPERCKSVLVNWQDNPYFPKELMEDMEQMRE*	hallmark_hmm	common_virus	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0015	shell	direct	high	389	0.997	GCA_003351585.1_01651
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1635047	1635253	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	9678	9884	GCA_003351585_1_1_1576	GCA_003351585_1_1_1576	+	1848871	.	COG1396	Transcriptional regulator, contains XRE-family HTH domain [Transcription]. 	MIELALLNDYSALRAWREHLGLTQAEVAGRLGISQAAYSQHENSQTLRKSTRIKIATALGINPAQLDF*	mmseqs_cdd	nonviral_gene	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0016	.	unmatched_CDS	none	0	0	.
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1635436	1635771	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	10067	10402	GCA_003351585_1_1_1577	GCA_003351585_1_1_1577	-	1848871	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MTKYIYIALGAVVVVLIGALRYQSSVIDELEITTKQQENTIQQQEDANKSLSLALQQERYAIIEQQERNNEIERIATENAESVKTIIKTQPCAHTRLPQSVLDRLHKENHD*	mmseqs_cdd	nonviral_gene	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0017	shell	direct	high	335	0.997	GCA_003351585.1_01652
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1635764	1636366	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	10395	10997	GCA_003351585_1_1_1578	GCA_003351585_1_1_1578	-	1848871	.	PDB:3WH1_A	Chitinase-	MTMMISEVTFNKIFPHAVKGVYQAISVQIEKAGCVNKMQQAMFLAQCGHESGGFTRFKENLNYSWLGLSKTFRKYFPDPLTAKKYERKPELIANRVYANRLGNGDEKSGDGWKYRGRGLIQITGKDNYAAFRKWLGRDIEPEDVAGNLDLSVKTAVWYWKCYELAELNSVEKVTRRINGGLNGIDERCKLYRALMVTDND*	common_virus_hmm	common_virus	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0018	shell	direct	high	602	0.998	GCA_003351585.1_01653
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1636335	1636691	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	10966	11322	GCA_003351585_1_1_1579	GCA_003351585_1_1_1579	-	1848871	.	TIGR01594	phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]	MPIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPAIRYVLIDAAMCASIAGVAVPICTHLFGHTEYSSFLGTMIGFVGTEKICEFLFKFINRRIEKDDNDDFRSDI*	mmseqs_cdd	nonviral_gene	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0019	shell	direct	high	356	0.997	GCA_003351585.1_01654
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1636953	1637462	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	11584	12093	GCA_003351585_1_1_1580	GCA_003351585_1_1_1580	-	1848871	.	pfam06530	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	MRKFSELSELTIEQEEFVDRYMYQWGAWVRSGRLDKPQLNIIAKLMQSVIPTEPNEPICDDSTGMMISEVVGRFFLKNDRTLHYIVFSYYVNKGTINHIAVKLRENCGEIKMQPCAGKPDIRIPSLKTMIRNVEKELKLAKAIIHELLVIGFVILQTGRQNAKNIKITY*	mmseqs_cdd	common_virus	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0020	shell	direct	high	509	0.998	GCA_003351585.1_01656
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1637463	1638008	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	12094	12639	GCA_003351585_1_1_1581	GCA_003351585_1_1_1581	-	1848871	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKVCGKAFVKTFSSTQKVCSPECAIKLARDNAKKAQELAEKKKQRERKAKLKSRSEWLKEAQSVFNKFIRLRDKNEPCISCGRYHQGQYHAGHYRSVGACPELRFCELNIHKQCAPCNDHKSGNIIEYRINLVNKISADKVAWLERQDHELKKYTIEDCKAMIKHYKAKIKELEE*	common_virus_hmm	common_virus	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0021	shell	direct	high	545	0.998	GCA_003351585.1_01657
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1638097	1638516	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	12728	13147	GCA_003351585_1_1_1582	GCA_003351585_1_1_1582	-	1848871	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPTDDKKPLVVKIQPITRNLEQNAKFHAMCQDVANQAEFMGRKLTMEQWKVLFISGHAIATNQKADVVPGLEGEFVNIRESSAQMSVSRMASLIEYVTSWGVQNGVRFNDRWGFK*	mmseqs_cdd	common_virus	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0022	shell	direct	high	419	0.998	GCA_003351585.1_01659
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1638573	1638776	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	13204	13407	GCA_003351585_1_1_1583	GCA_003351585_1_1_1583	-	1848871	.	.	hypothetical protein	MTSYKCPKCGAELEDFYTPDYFISSSEWDDDRFRCNGHLIEPIPFPQVSKYSAVNRTKSCGYFGLED*	.	hypothetical_protein	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0023	shell	direct	high	203	0.995	GCA_003351585.1_01660
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1638773	1639414	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	13404	14045	GCA_003351585_1_1_1584	GCA_003351585_1_1_1584	-	1848871	.	PFAM:PF06992.10	Replication-protein-P	MNAITPTQKSAVEKSDVSDNATKLIDRMFTRLKSLFPAWKQAFDSIETYNETKQVWLEELIKADVMTPLALKRGLDRAAGSESPFFPSVGQFIAWCSEDYHELGLPNEAELYQRYNTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKAIPKLLTKAAEKVRSNFPFEDIPKMIPEKLSFYDKAKADKARDSLMAMMKGKGALQ*	rep_hall_hmm	common_virus	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0024	shell	direct	high	641	0.998	GCA_003351585.1_01661
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1639573	1640196	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	14204	14827	GCA_003351585_1_1_1585	GCA_003351585_1_1_1585	-	1848871	.	PFAM:PF04492.12	Replication-protein-O	MSRFIPNSFQIPNSFVDEYLDSLSGKAIKCYLLIARKTTGWRKDSDRISTSQFMAQCGIKDRKTAYAAIEELESVNLVNIERKQGEINEFSLNFFIDENNDFKPAPKNGISTSTKNWDSTKDNIKNNIQDNPPISPQGESATPANGKINAENIPLPDYIDRETWIAYCRMRKVKRAEIKTQDTIKRCLRDLEKLCGGSPDLARAILD*	rep_hall_hmm	common_virus	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0025	cloud	direct	high	623	0.998	GCA_003351585.1_01662
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1640193	1640414	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	14824	15045	GCA_003351585_1_1_1586	GCA_003351585_1_1_1586	-	1848871	.	PFAM:PF10078.8	CII-like-regulator	MARNKLTRSARVLSDQVIEKYYKQKQYEVAEGMETTPSTLSRFISNEEFNQTFNFIAACQFGVFSRYASELML*	phrogs_hmm	hypothetical_protein	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0026	shell	direct	high	221	0.995	GCA_003351585.1_01663
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1640772	1641428	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	15403	16059	GCA_003351585_1_1_1587	GCA_003351585_1_1_1587	+	1848871	.	pfam00717	Peptidase S24-like. 	MATLGERIKAYREQLKISQKELAERCNNIDTKSENARWGQPRIANYEKGNRTPDLEDISIISKALNILPEVLAFDSNISEIKESICRYPLLSPIQAGLWTDIRSLEGFDGYEMIPSTVIASENSFYLRIEGKSMLPRFNEGDLVLIDPDIVPTPGKFVVAINGDNEATFKQYKELGTKTPEGIPHFELVPLNPMFPTLSSLNQEIRIIGVARERVETL*	mmseqs_cdd	common_virus	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0027	shell	direct	high	656	0.998	GCA_003351585.1_01664
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1641462	1642235	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	16093	16866	GCA_003351585_1_1_1588	GCA_003351585_1_1_1588	+	1848871	.	PF09192.10	Actin-fragmin kinase, catalytic	MATVEEVLLDKRMDKIIFIRERMEMGITRPFICQTDKENWFIIKTLSMMPISQLLAEVIGSTLAHEIGLPCPSIDFVEITPKSTQYVSSEWRQDLPNGIAFASSFVVNAKIAKTVQVKNPAFLSEPEQKLLYMFDRWILNSDRTASQVGTGNINLLFDEQQQKILVIDHNLAFDERADFSEHIFSPQNREWRLDWVDKQTFTDKAIDTLKKFDHIYQSIPDDWFVGDEEFHKIEHQINRIKALLNRITQENYWDNIE*	hhsuite_tools	nonviral_gene	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0028	shell	direct	moderate	707	0.913	GCA_003351585.1_01665
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1642232	1643047	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	16863	17678	GCA_003351585_1_1_1589	GCA_003351585_1_1_1589	+	1848871	.	pfam11236	Protein of unknown function (DUF3037). This bacterial family of proteins has no known function.	MKQPILYSFVRYRPYFETGEFVNVGLLMCEPEKKKLTYQLVPKNNKRVNDFFYKSKMFETVRETINDELQYVVNQPFNGSAQDIATFFHHYIDVKEGIVQYSNAAVGMVDDPQDYFNKLYTQFIQNAGVKTESQEQVILKHYKTLFRQENDSVLAQYKQYMVNGDFAKFALPLALKNQQDKHILKAVKPLAFDQVESPSMIEHCDSWVAKINRAEQEGFIKRENILFALDTPNTAHKANILDTIKRTFDHFKLQHISWNEDKQIINFAKAI*	mmseqs_cdd	nonviral_gene	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0029	shell	direct	high	815	0.999	GCA_003351585.1_01666
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1643539	1643712	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	18170	18343	GCA_003351585_1_1_1590	GCA_003351585_1_1_1590	-	1848871	.	COG3422	Uncharacterized conserved protein YegP, UPF0339 family [Function unknown]. 	MKFETYVDARIEWRWRLKADNGKIIADSGESYKNYTDCLHAIDLVKSTNQSTKVEMA*	mmseqs_cdd	nonviral_gene	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0030	shell	direct	high	173	0.994	GCA_003351585.1_01667
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1643726	1643935	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	18357	18566	GCA_003351585_1_1_1591	GCA_003351585_1_1_1591	+	1848871	.	.	hypothetical protein	MKKYLFHYYFQGTKWACDVYANNPEEAKEKIKAMSQAIYDGELKFEIHIPENPLSKLARLVARIIKKFT*	.	hypothetical_protein	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0031	shell	direct	high	209	0.995	GCA_003351585.1_01668
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1644145	1644312	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	18776	18943	GCA_003351585_1_1_1592	GCA_003351585_1_1_1592	+	1848871	.	.	hypothetical protein	MWIFQNTFASTETQRHVKPLRMIDEVCFEMADIKQTRLKNGRKKKKTAYLKMIKN*	.	hypothetical_protein	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0032	.	unmatched_CDS	none	0	0	.
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1644869	1645243	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	19500	19874	GCA_003351585_1_1_1593	GCA_003351585_1_1_1593	+	1848871	.	COG3561	Phage anti-repressor protein  [Mobilome: prophages, transposons]. 	MTNSNLIPVFNGLIQNQPVQLCNARELHAFLEIQTRYNDWIKNRINEYGFIQDEDYLVITERTNGRPRKEYHITLDMGKELGMVERNEQGRQIRQYFARCERTLKALQPTTTARLARTRKEIQF*	mmseqs_cdd	common_virus	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0033	shell	direct	high	374	0.997	GCA_003351585.1_01670
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	CDS	1645575	1645694	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	20206	20325	GCA_003351585_1_1_1594	GCA_003351585_1_1_1594	+	1848871	.	.	hypothetical protein	MNKLIITLVCAFVVYMVHALNLNQDFDGKICHAEQTQQY*	.	hypothetical_protein	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_CDS_0034	shell	direct	high	119	0.992	GCA_003351585.1_01672
GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote	cenote	tRNA	802573	802655	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C40	15336	15418	tRNA-Leu	tRNA-Leu	-	1848871	.	tRNAscan-SE score: 57.5	Leu	NA	tRNAscan-SE	.	C40	18928	787238	806166	GCA_003351585.1|CP031254.1@region_787239_806166@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote	cenote	tRNA	1457930	1458006	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C78	4306	4382	tRNA-Val	tRNA-Val	+	1848871	.	tRNAscan-SE score: 70.7	Val	NA	tRNAscan-SE	.	C78	52188	1453625	1505813	GCA_003351585.1|CP031254.1@region_1453626_1505813@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote	cenote	tRNA	1636756	1636826	GCA_003351585.1	CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585.1_CP031254.1	GCA_003351585.1|CP031254.1	GCA_003351585_1_1	GCA_003351585_1_1@C88	11387	11457	tRNA-Trp	tRNA-Trp	-	1848871	.	tRNAscan-SE score: 48.8	Trp	NA	tRNAscan-SE	.	C88	20325	1625370	1645695	GCA_003351585.1|CP031254.1@region_1625371_1645695@tool_cenote_tRNA_0001	.	.	.	.	.	.