core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1405564	1405770	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	1	207	GCA_003351665_1_1_1274	GCA_003351665_1_1_1274	-	2321871	.	TIGR00631	excinuclease ABC, B subunit. All proteins in this family for wich functions are known are DNA helicases that function in the nucleotide excision repair and are endonucleases that make the 3' incision next to DNA damage. They are part of a pathway requiring UvrA, UvrB, UvrC, and UvrD homologs. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University) [DNA metabolism, DNA replication, recombination, and repair]	MIGNIKGRLKGKNKVKVGEIHNEEDAIKEIAKLEKAMQQAARNLQFEEAAVLQDRIRWVKENLLFGSE*	mmseqs_cdd	nonviral_gene	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0001	persistent	direct	high	206	0.995	GCA_003351665.1_01316
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1405767	1406576	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	204	1013	GCA_003351665_1_1_1275	GCA_003351665_1_1_1275	-	2321871	.	COG0796	Glutamate racemase [Cell wall/membrane/envelope biogenesis]. 	MSTSKQRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQIVDFLLENDVKALVIACNTIAAVAGQKIRQKAGNMPVLDVISAGAEAALQTTKNNRIGIIATNTTVNSNAYARAIHSKNNDTLVRTQAAPLLVPLVEEGWLDHEVTRLTVREYLKPLLADDIDTLVLGCTHFPLLKPLIGREAQNVTLVDSAITTAEATAKALAQAGLLNTENDNPDYRFYVSDIPLRFRTIGERFLGRSMEQIEMVTLG*	mmseqs_cdd	nonviral_gene	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0002	persistent	direct	high	809	0.999	GCA_003351665.1_01317
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1406638	1407867	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	1075	2304	GCA_003351665_1_1_1276	GCA_003351665_1_1_1276	-	2321871	.	cd17320	Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	MTAQQAPLGEKTMAVLMAMLVALMPFSVDAYLPAIPEMAKSLGSDIHRIEQSLSFFMFGVAFGQVVGGSISDIKGRKPVALVGLSIYFAAVIGLTIVNNVEQLLNLRAVQAFGAGMTVVISGAMVRDYYSGRKAAQMFALIGIILMIVPLMAPMIGAGLQNLGGWRMIFGFLACYSLLLWGLMWYFLPKPHQKGKISMDVFGVVAGRFKRVLRTRAAMGYLFFQAFSFGSMFAFLTESSFVYQQLYHASPNQYAWIFALNIITMMSFNRVTAWRLKTGTHPQNILKWGIIVQFVANLLMAVLVLLLSLPPLWALVLCVMFSVGTQGLVGANTQACFMGYFSEEGGSANAVLGVFQSLIGASVGMATTWLHNGSALVMAGMMLSSTVCGIVLLWVCSHQAWMENDKKEYV*	mmseqs_cdd	nonviral_gene	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0003	persistent	direct	high	1229	0.999	GCA_003351665.1_01318
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1408109	1409638	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	2546	4075	GCA_003351665_1_1_1277	GCA_003351665_1_1_1277	+	2321871	.	PFAM:PF05707.11	Zonular-occludens-toxin-(Zot)	MTTFQIARADGKTLEIQGKMANRHGLIAGATGTGKTVTLRRMAEAFSSEGVPVFLVDVKGDLSGIAHAGANSGKVGERIAEFDLGEQWLQSFPVRFWDVYGETGIPVRVTVSEMGPMLLARLMNLNDTQEGLLNLVFKVADDRGWHILDLKDLRSMLKHVSDHASEYRTQYGNVSAASIGAIQRQLLTLENEGAEKFFGEPSLNLQDWMQTDNGKGVINILNSEKLMRSPRMYSAFLLWMLAELFETLPEVGDLDKPKFVMFFDEAHLMFDNAANALVEQIEQVVRLIRSKGVGVYFVTQNPLDLPDTILGQLGNRVQHALRAFTPRDQKAVKAAAETFRSNPNIKVAEAIAELGVGEALVSFLDEKGTPEPVERALVLPPQSALTPLAAEERNRLFQNDDLYPTYKDMVDNYSAFEALAEVDSQAAAEKEAANAAKEQEKAQKAAEKEAANADPGILGGLIGGLSGGRKKSGQGLGYNVADAIGSQINRQVTNAISRSVMGIIKNMFK*	hallmark_hmm	common_virus	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0004	persistent	direct	high	1529	0.999	GCA_003351665.1_01319
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1409769	1410257	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	4206	4694	GCA_003351665_1_1_1278	GCA_003351665_1_1_1278	+	2321871	.	COG0456	Ribosomal protein S18 acetylase RimI and related acetyltransferases [Translation, ribosomal structure and biogenesis]. 	MPQTVTLVLYDPAHAADLDYRLHGEQAPYSVSPQERLQNGRFAAPDCLAVTILCQNRPIGFFILDKGSDRLTYSANPRAVLLRSMSVNPAYQGQGCARAALADDKLAPLIRSILPDCDEIVFGVHHANRAAIGLYQSCGFADTERTFMGTKGLQYIYSKTIR*	mmseqs_cdd	nonviral_gene	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0005	cloud	direct	high	488	0.998	GCA_003351665.1_01320
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1410307	1411662	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	4744	6099	GCA_003351665_1_1_1279	GCA_003351665_1_1_1279	-	2321871	.	COG2848	Uncharacterized conserved protein, UPF0210 family [Cell cycle control, cell division, chromosome partitioning]. 	MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISSDIDVLNQNIYNKITTVGKDLVATAKYLSAKYGVPIVNQRISVTPIAQIAAATKADSYVSVAQTLDKAAKAIGVSFIGGFSALVQKGMSPSDEVLIRSIPEAMKTTDIVCSSINIGSTRAGINMDAVKLAGETIKRTAEITPEGFGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVSGPGVVKAALENSDATTLTEVAEVVKKTAFKITRVGELIGREASKMLNIPFGILDLSLAPTPAVGDSVARILEEMGLSVCGTHGTTAALALLNDAVKKGGMMASSAVGGLSGAFIPVSEDEGMIAAAEAGVLTLDKLEAMTAVCSVGLDMIAVPGDTPAHTISGIIADEAAIGMINSKTTAVRIIPVTGKTVGDSVEFGGLLGYAPVMPVKEGSCEVFVNRGGRIPAPVQSMKN*	mmseqs_cdd	nonviral_gene	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0006	persistent	direct	high	1355	0.999	GCA_003351665.1_01321
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1411678	1411950	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	6115	6387	GCA_003351665_1_1_1280	GCA_003351665_1_1_1280	-	2321871	.	PRK00194	ACT domain-containing protein. 	MNNSVITVIGKDRVGIVYDVSKILAENQINILNISQQLMDDFFTMIILVDTSKSTKSRQEVLDLFAEESKKLALDIRMQNEEIFQAMHRI*	mmseqs_cdd	nonviral_gene	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0007	persistent	direct	high	272	0.996	GCA_003351665.1_01322
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1412058	1413203	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	6495	7640	GCA_003351665_1_1_1281	GCA_003351665_1_1_1281	-	2321871	.	cd13659	The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	MKKSLMAAAILSLVLTACSGGKETAAESSASQTQTSSSQTDKLNIYNWSDYVDPATLSAFEKNTNINVRYDYYDSNEALEAKLLTGKSGYDLVAPSIANVGRQIKAGAYQKIDKSQIPDYANIDPDLLKMMETVDPGNEYAVPYFWGINTLAINKQQVQKALGTDKLPENEWDLVFNPEYTQKLKSCGISYFDSAIEQIPLALHYLGKDPNSENPDDIKAAVDMMKKVRPDIKRFTSSGYIDDMAAGNLCVSVGYGGDLNIAKTRAKEAGNGVEVEVLAPKSGVGIWVDSLMIPRDAQNVANAHKYINHTLNPETAAKNGNYVTYAPASRPARDLMDEKYTSDESIFPSKELMEKSFIVSPKSTDASKLSVRLWQALKAGR*	mmseqs_cdd	nonviral_gene	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0008	persistent	direct	high	1145	0.999	GCA_003351665.1_01323
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1413547	1414068	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	7984	8505	GCA_003351665_1_1_1282	GCA_003351665_1_1_1282	+	2321871	.	PRK00714	RNA pyrophosphohydrolase; Reviewed	MLDREGYRPNVGIILINERNEVFWGKRVREHSWQFPQGGIKPGESPETAMYRELYEEVGLLPQHIKIVGRTRDWLRYDVPSHWVRREWRGSYRGQKQIWYLLRLVGRDSDVNLRACHHPEFDGWRWHQYWAPVDEVIDFKRGVYLDALTELSRFLRGIESYEDFIRRNPIENL*	mmseqs_cdd	nonviral_gene	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0009	persistent	direct	high	522	1.0	GCA_003351665.1_01324
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1414098	1416122	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	8535	10559	GCA_003351665_1_1_1283	GCA_003351665_1_1_1283	+	2321871	.	PDB:4URL_A	DNA-topoisomerase-IV	MFFILSDGLYIIPMAKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDNAADEALGGFATAIDVQIHEDGSLSVRDNGRGIPVGLHPEEGVPVVELVFTRLHAGGKFNKKDGGSAYAFSGGLHGVGVSVTNALSTRLEVTVKREGKVHRIVFSGGDVIEPLTEVGKCAVKDSGTEVRVWPDGKYFESPNYSIPELERLLRAKAVLLPGVRVSLTRPVKGEDEAYTQTWHYPDGLKSYLTDLIADAQEAVPIFSCENYISDGHNGDFSIGEGAAFALTWLEEGSCANESYVNLIPTPLGGTHEAGLKQAVFNAVNTFINLHNLLPRGVKVQSDDVFSKTAFVLSARVLDPQFQGQTKDKLTNRDALKLVATVSGDPLELWLNQNVDYGKKIAELAIRQAQARMRSVKKIEKKKGSGVAVLPGKLTDCESEDIRENELFLVEGDSAGGSAKLARDKATQAILPLRGKVLNSFEVHPDQLFGNAEIHDISVAIGVDPHGINDNPDLSGLRYGKIAILSDADVDGSHIQVLLLTLFYRHFPKLIADGHIYVAQPPLFRVDVNAQGKSKPARKFYALDQNELDSILERLQKEGVKETAYSISRFKGLGEMNPDQLKDTTMHPDTRRLLQVQIPEGADDETRDIFVKLMGKGEASARRAWMEKEGDTAELDI*	common_virus_hmm	common_virus	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0010	persistent	direct	moderate	1985	0.98	GCA_003351665.1_01325
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1416625	1417218	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	11062	11655	GCA_003351665_1_1_1284	GCA_003351665_1_1_1284	-	2321871	.	PRK00393	GTP cyclohydrolase II RibA. 	MSNALKFVASCRLPTEWGEFTMHGFEEEGGQEHVALTMGDVSDGLPVLSRIHSECLTGDALFSVKCDCGPQLQAAMQAVQKEGRGVIVYLRQEGRGIGLINKIRAYRLQDQGLDTVEANVALGLPVDARDFTLAKQIYDYLHIREVRLLTNNPEKIQTLKDSGINVVERIALHVGENVENERYLHTKADKLGHLIFD*	mmseqs_cdd	nonviral_gene	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0011	persistent	direct	high	593	0.998	GCA_003351665.1_01328
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1417211	1417876	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	11648	12313	GCA_003351665_1_1_1285	GCA_003351665_1_1_1285	-	2321871	.	.	hypothetical protein	MPALLIKDFLQTQGLKLPADEIHVAYLTAQAVIKMGNASVERSILWPSEDGWQLADYVDAEHELLLKQIFMALDSVAERTEHLKSAAVYTAFPKDGALSLVRLSRWGVPLENVISIDEQAGQAFLAVRTAQSGWMNVCQNVAYWQEIGELSDERNHPGLSQISVPVCMPSGAVLGVVHAEFDVKDGAPDEVLVAWIALALALAEPLKNLLGVAENEEAENE*	.	hypothetical_protein	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0012	persistent	direct	high	665	0.998	GCA_003351665.1_01329
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1418276	1419562	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	12713	13999	GCA_003351665_1_1_1286	GCA_003351665_1_1_1286	+	2321871	.	PDB:1Z19_B	Integrase	MIQGISQNPCKAYPQMPLNDRQIKAAKPADTGKKIKLFDGNSLYLEVTPAGGKIFRMRYRIDGKDKDFTIGKYPAVSLVEARQAAENARRMIAQGQDPTKAKQEAKAARQAALLNTFEHLAKQWHKDNLPRWKEHHAERIMRYLKNDVFPVIGEIPVDEIKVTHIKNLLDDIMARGVTDTADKIRGWIGAVFDYSAMLEISENNPARLLKNHIPNLPTKHKPALPREELPEFYRRLILANNIERQNKIAIMLIMLVFVRNNELRGGQWQEVDFKNKRWIIPAERMKHEKMKPKPALCVPLSDWAIELLQELHTLTGHSRFMFPSRTNVNRHISENTLGKIINEKLGYKGRATPHGFRAVASSLLYENNFNGGAIETQLAHVEENKIKDSYAYQADYMPQRIEFMQWYSDYLRERYNQALQMIQKDKTG*	common_virus_hmm	common_virus	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0013	shell	direct	high	1286	0.999	GCA_003351665.1_01331
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1419962	1420435	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	14399	14872	GCA_003351665_1_1_1287	GCA_003351665_1_1_1287	+	2321871	.	.	hypothetical protein	MENSKSTEILIKRLTQENIKLRNKIKELERILRYSEKLTTIPAIHKIKTKDTKRRLNLAIKELSKDKEELIHQAILENARKAAKTRKSPYEKAGTIAAVNELLEENQEILKRKGGKTTLYKLIRDLIASGDIPAPKEPTEKTILQWIANYENMKSAS*	.	hypothetical_protein	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0014	cloud	direct	high	473	0.998	GCA_003351665.1_01332
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1420550	1420756	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	14987	15193	GCA_003351665_1_1_1288	GCA_003351665_1_1_1288	+	2321871	.	COG3311	Predicted DNA-binding transcriptional regulator AlpA [Transcription, Mobilome: prophages, transposons]. 	MNNTVLRVNDTARVMGVSRATIWNWVNPKSRHHRPDFPKPIKLSDNITGWLSSEIEEYLNKLAAKREE*	mmseqs_cdd	nonviral_gene	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0015	shell	direct	high	206	0.995	GCA_003351665.1_01333
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1420871	1421110	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	15308	15547	GCA_003351665_1_1_1289	GCA_003351665_1_1_1289	+	2321871	.	pfam14090	Helix-turn-helix domain. This helix-turn-helix domain is often found in phage proteins and is likely to be DNA-binding.	MKTDYTNHKSKTPSQRERVLARLRKGSVTSWELSQMGILSYNTRIMELRRAGHEIITVMEEVTNQFGETVKRGRFVLIN*	mmseqs_cdd	nonviral_gene	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0016	shell	direct	high	239	0.996	GCA_003351665.1_01334
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1421127	1421825	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	15564	16262	GCA_003351665_1_1_1290	GCA_003351665_1_1_1290	+	2321871	.	.	hypothetical protein	MNIEYVKTVFATRQELLKEEEDKCSELTAQIEAAEAGVSEAEAVINEFAGLRSKRKGIFADLLKMGKPTNTEEAKELDSEIAAKREEADRAADVLEVQKELLESLFNDRRQHLNRISELRNLLAVSRYEMFIAGIEETHLPEYLEAARAYAKAAAKLVGIGKAAVEMRTNLQENGLRPDCRNYGELMPNRIIDLRLPGFFNMMDNTGGEENAIFDIFKDMEKEKEAVFNSLK*	.	hypothetical_protein	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0017	shell	direct	high	698	0.999	GCA_003351665.1_01335
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1421892	1422452	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	16329	16889	GCA_003351665_1_1_1291	GCA_003351665_1_1_1291	+	2321871	.	PFAM:PF03592.15	Terminase-small-subunit	MTPKQEQFARLYVETGNASEAYRQAYNTDNMKPETVTNEAYKLLQAPDISAMVDDLKAEARQRHAVTVDDLLHELEQARAAALTAPTPQSSAAVSATMGKAKMLGLLVDKTEIKAEAEIQEKPKSYVSSIVESLTEEEKKAILDLALKTHRGKWEAVTLADIAAVTGKDTDKTCYAVILITALDRI*	hallmark_hmm	common_virus	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0018	cloud	direct	high	560	0.998	GCA_003351665.1_01336
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1422743	1423069	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	17180	17506	GCA_003351665_1_1_1292	GCA_003351665_1_1_1292	+	2321871	.	.	hypothetical protein	MQSCTSTQIQTIQNQAQTVTIPLELANRIMDALYYGGEFIANTGAIIDTICDNMAAHPVHNTPISAIRSTARLATVIQTLVPHAENLESFDLSSELEGYIQNRPHPAP*	.	hypothetical_protein	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0019	shell	direct	high	326	0.997	GCA_003351665.1_01337
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1423407	1423622	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	17844	18059	GCA_003351665_1_1_1293	GCA_003351665_1_1_1293	+	2321871	.	.	hypothetical protein	MKQTNKSDRFRRYLNRALLVFWVLLLALVVRACNQPAHADTEQLEQETPAIWETDPTAGIVLEPVSEEAEQ*	.	hypothetical_protein	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0020	shell	direct	high	215	0.995	GCA_003351665.1_01338
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1423619	1423804	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	18056	18241	GCA_003351665_1_1_1294	GCA_003351665_1_1_1294	+	2321871	.	.	hypothetical protein	MKTIMDKLANQLNSKEKAIAAVDVVSTILLIVNDGASQKEAIHTVSVIAREAMDRFEEVGK*	.	hypothetical_protein	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0021	shell	direct	high	185	0.995	GCA_003351665.1_01339
GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote	cenote	CDS	1423801	1424916	GCA_003351665.1	CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665.1_CP031251.1	GCA_003351665.1|CP031251.1	GCA_003351665_1_1	GCA_003351665_1_1@C111	18238	19353	GCA_003351665_1_1_1295	GCA_003351665_1_1_1295	+	2321871	.	PFAM:PF08273.11	primase-helicase	MKPTYKEIRAAAQYRWPEIHAAIGIDPKFLRDKHQPCPACNDGHDRFRYDDEDGNGTFFCTHWKDGDREGGGNGFGLVMHFLNCNFDEALRTVAGILGMDNANPLPIPPTRPQAQPRPEKDQIEKLAALWRITEPIRPDCPVIQYLKSRGLEMAHLPENVRFLPEKDYWTTGEDKPLLLGSFPCMVCAIRDMDEELQGLHLTYLQTTYDKPCGEDGLHTPRYQKLAIKHPETGEALPAKKMRSRKKGSISGQAVHLFPIPENGRLVIAEGIETALAARELCKAYDWGLCAALSANSLANFHFLNGIKEIAIIADNDTPRPVGYRAAYDLAMRAIKQGIKASIWQSKTPGYDALDELNEKKQSDNHFRGQTA*	rep_hall_hmm	common_virus	C111	19353	1405564	1424917	GCA_003351665.1|CP031251.1@region_1405565_1424917@tool_cenote_CDS_0022	shell	direct	high	1115	0.999	GCA_003351665.1_01340