core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote	cenote	CDS	695664	696674	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C45	1	1011	GCA_003352345_1_1_655	GCA_003352345_1_1_655	-	1914782	.	CDD:PHA02536	portal-vertex-protein	MSKKSKKSTALSTGNQAQAFSFGEPIPVLDRAEVLNYFESVLMYEKYYNPPINLSYLAKALNASAHHNSAITVKKNILLSTCKTTALLPRTQLEKLVQDYLVFGNAYLEKVENTFGKVIALKSPLAKYIRVGVKKGIFYQIVNGFDEYEFPKDAVFNLINPDVNQEIYGVPEYLAALQSAFLNESATLFRRKYYLNGAHAGSIIYMTDPTQNKDDIEAIKTQIRQTKGTGNFKNLFVYIPDGKKDGMQVIPLSDAIAKDDFLNIKNTSRDDVLAAHRVPPQLMGIVPNNTGGFGDVEKATRVFFINEIIPLQERLKEINSWVGEEVITFSDYKLLN*	hallmark_hmm	common_virus	C45	9645	695664	705309	GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote_CDS_0001	shell	direct	high	1010	0.999	GCA_003352345.1_00691
GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote	cenote	CDS	696684	698354	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C45	1021	2691	GCA_003352345_1_1_656	GCA_003352345_1_1_656	-	1914782	.	CDD:PHA02535	terminase-ATPase-subunit	MRLIFPASTIASWKDREKWDDIAPVGRVELALETRLNLLIAKEEKSGSDYKEIDLLGRQMERMARVKKYSFGDGNEVDLNPKLANRNKGNRKKAEPNAIDQEQEELLINGFLDGMFNYQRIWHKAKEHRIRNILKSRQIGATYYFAHEAFIDALTTGHNQIFLSASKKQALQFRSYIVNYAKQTADVDLKGETIKLPNGAELIFLGTNSATAQSYHGNLYFDEVFWVPKFDVIRKVASGMAAQKMYRQTYFSTPTTIAHPAYAFFSGKAFNRNRTKSEKIEIDISHANLKNGKLCADRQWKQIVSIYDAMEGWCNLFNIDDLIAENSKEEFEQLFLCQFADDNTSAFKFADLQLCQVDSLEEWHDYKPFYQRPFGNREVWLGYDPAFTGDRAALAIIAPPKVEGGDYRVLHWQTFHGMDYEAQASRIKSFCDDYNVTRIVIDKTGMGSGVFQEVKKFYPMAIGLDYNADLKNEMVLKTQNLIQKRRLKFDGNEIITSFMTVKKRITGTGKITYVSDRSEDASHGDLSWAIMNCILNVPYGLNGDVSSNQSTIFTFE*	hallmark_hmm	common_virus	C45	9645	695664	705309	GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote_CDS_0002	shell	direct	moderate	1566	0.937	GCA_003352345.1_00692
GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote	cenote	CDS	698540	699589	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C45	2877	3926	GCA_003352345_1_1_657	GCA_003352345_1_1_657	+	1914782	.	PFAM:PF05125.11	Major-Capsid-protein	MNKFTKQKFNAYVVGVAQDNGEDVAFIANGGQFTVEPTIQQKLENAVFESSDFLKHINVVMVQEMKGSALRLGVLSPVASRTDTNTKARETTDIHSLQENTYSCEQTNFDTHLNYATLDSWAKFPDFAARVGKLKAERIALDRIMIGWNGTSVAATTNRTEHPLLQDVNKGWLVQIEDKAKARVLKEIEKSSGKIEIGAGKTYKNLDALVFALKEDFIPAQYRDDTKLVAIMGSDLLADKYFPLINQEKPSEILVGDTVISQKRVGGLQAVSVPFFPKGTVLVTSLDNLSIYVQEGKVRRHLKDVPERNRVEDYLSSNEAYVVENYEAVAMAKNITILEAPAPISPVAA*	hallmark_hmm	common_virus	C45	9645	695664	705309	GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote_CDS_0003	shell	direct	high	1049	0.999	GCA_003352345.1_00694
GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote	cenote	CDS	699601	700251	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C45	3938	4588	GCA_003352345_1_1_658	GCA_003352345_1_1_658	+	1914782	.	PFAM:PF05944.11	small-terminase	MRPTKRHFLEFSAAIANAAETEDLSDFTEYDKMCRILARHRKDLKNIQSTERKGAFKKQILPDYLPWIKGALSVGSGKQDNVLMTWCVWAIDCGEYHLALQIADYAVFHDLRLPEPFTRTLGTLLAEEFADQAKTARAANKPFDESYLAQIQRITADCDMPDESRARLLRELGLLLVEKHPEQALAYLERALGLDQKIGIKGDIKKLKKQLSTTEY*	hallmark_hmm	common_virus	C45	9645	695664	705309	GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote_CDS_0004	shell	direct	high	650	0.998	GCA_003352345.1_00695
GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote	cenote	CDS	700544	701050	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C45	4881	5387	GCA_003352345_1_1_659	GCA_003352345_1_1_659	+	1914782	.	PFAM:PF05926.10	head-completion-protein	MSDGAISVKLAPDYEMGEVQQQLNDYDTSDDIISNDGFFPDMSLSQFRNQYRADGTITTQRLQDALIEGMASVNAELSTFKTQSKRDSLEQITAPSVNGESVLVYRYKRAVSCLALANLYERYASYDSTNDGEKKMALLKDSIDELRRDARFAISDILGRKRVDAELI*	hallmark_hmm	common_virus	C45	9645	695664	705309	GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote_CDS_0005	shell	direct	high	506	0.998	GCA_003352345.1_00696
GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote	cenote	CDS	701050	701259	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C45	5387	5596	GCA_003352345_1_1_660	GCA_003352345_1_1_660	+	1914782	.	COG5004	P2-like prophage tail protein X  [Mobilome: prophages, transposons]. 	MQVYAQQNDNLDAILYRHFGRSEGLLEITCELNPHLMDKPIIPIGTVVNLPDADTEKISVANDTIQLWS*	mmseqs_cdd	nonviral_gene	C45	9645	695664	705309	GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote_CDS_0006	shell	direct	high	209	0.995	GCA_003352345.1_00697
GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote	cenote	CDS	701261	701482	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C45	5598	5819	GCA_003352345_1_1_661	GCA_003352345_1_1_661	+	1914782	.	pfam16080	Bacteriophage holin family HP1. Phage_holin_2_3 is a family of small hydrophobic phage proteins called holins with one transmembrane domain. Holins are produced by double-stranded DNA bacteriophages that use an endolysin-holin strategy to achieve lysis of their hosts. The endolysins are peptidoglycan-degrading enzymes that are usually accumulated in the cytosol until access to the cell wall substrate is provided by the holin membrane lesion.	MHDTPSRASYTSGIFAFLIGRIADMFSNVNWADVASITGIVIGVATFLVNWYYKKKDFELKEKELKQRSHHYD*	mmseqs_cdd	common_virus	C45	9645	695664	705309	GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote_CDS_0007	shell	direct	high	221	0.995	GCA_003352345.1_00698
GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote	cenote	CDS	701475	701993	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C45	5812	6330	GCA_003352345_1_1_662	GCA_003352345_1_1_662	+	1914782	.	CDD:cd16901	P1-lysozyme	MIKRSAKYICAISAIVGLVIATHGNEIRTSEKGLLLIGNAEGCMKKPYQCPADVLTVGIGITDAVEKIDRNKIYTLQEIAELYVKGIKQSEKCVNQYANGQTMPQGAFDALVSITFNVGCGKLKNSSLFKMARQGYSKAMCGQFERWIYAAGKPLKGLIERRQKEKALCLIS*	common_virus_hmm	common_virus	C45	9645	695664	705309	GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote_CDS_0008	shell	direct	high	518	0.998	GCA_003352345.1_00699
GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote	cenote	CDS	701978	702328	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C45	6315	6665	GCA_003352345_1_1_663	GCA_003352345_1_1_663	+	1914782	.	CDD:TIGR03495	phage-lysis-regulatory-protein	MFNFLTAKERSILLIGPILLVLLIMFLGFEANYWRKEMLKEEQLKLKWQNAYIELNHSVQNFAEQQAQLIQAVNNLKAKQNQQTQNLKNVLKSNQDWADRPLPDDVKRLFNSAGNH*	common_virus_hmm	common_virus	C45	9645	695664	705309	GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote_CDS_0009	shell	direct	high	350	0.997	GCA_003352345.1_00700
GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote	cenote	CDS	702288	702506	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C45	6625	6843	GCA_003352345_1_1_664	GCA_003352345_1_1_664	+	1914782	.	NF038368	Rz1-like lysis system protein LysC. LysC is an Rz1-like component of a phage lytic system, substantially overlapping although not fully embedded in the gene for the Rz-like LysB component. The phage lysis defect in the absence of a functional LysB/LysC system is appears in the presence of high concentrations of divalent cations.	MMLNACSTQQEIIKSPILCPQTTECSAYSPQIRTNGELAEAYLQTQHHLDLCIIENSSLKKCIDEFNKKEQP*	mmseqs_cdd	nonviral_gene	C45	9645	695664	705309	GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote_CDS_0010	shell	ambiguous	low	42	0.192	GCA_003352345.1_00700
GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote	cenote	CDS	702503	702682	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C45	6840	7019	GCA_003352345_1_1_665	GCA_003352345_1_1_665	+	1914782	.	PFAM:PF01258.16	DksA-like-zinc-finger-protein	MTDQFDRAQQLEEMQREIALKKHRTFKAVSRLYCEDCEDCEDCEDCEDCDAPSQKNADK*	phrogs_hmm	hypothetical_protein	C45	9645	695664	705309	GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote_CDS_0011	cloud	direct	high	179	0.994	GCA_003352345.1_00701
GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote	cenote	CDS	702833	703255	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C45	7170	7592	GCA_003352345_1_1_666	GCA_003352345_1_1_666	+	1914782	.	PFAM:PF05069.12	Virion-morphogenesis-family	MVTVEEVQAKLTALIANLSPQARRQLGRKIGQALRKSQSNRIARQQNPDGSAFEPRKPCKEFRKKKGRIKRKAMFAKLCTARHLKVRSNGNEVSVGFNGSSAAIAAVHQYGLSASPSKYKDFKVQLHQNQLQAQVSQQTE*	hallmark_hmm	common_virus	C45	9645	695664	705309	GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote_CDS_0012	shell	direct	high	422	0.998	GCA_003352345.1_00702
GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote	cenote	CDS	703347	703742	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C45	7684	8079	GCA_003352345_1_1_667	GCA_003352345_1_1_667	+	1914782	.	PFAM:PF15254.5	tail-length-tape-measure-protein	MNNLQLTVLLNAIDKISAPVRSASKSVNELSAKLKESKSIQRQLNQQNKQHQAAMKQYASAINPLKSKLDSLNQELEQAKQKAASYAQYMKNAQHPTAGLQKEVEKAKSAVKNSSKNKLMQQINYSKYAKN*	phrogs_hmm	hypothetical_protein	C45	9645	695664	705309	GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote_CDS_0013	shell	direct	high	395	0.997	GCA_003352345.1_00703
GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote	cenote	CDS	703917	705308	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C45	8254	9645	GCA_003352345_1_1_668	GCA_003352345_1_1_668	+	1914782	.	PFAM:PF10145.8	minor-tail-protein	MENHKLLELKPLLWVQRSLHQLSIPFEILCRLKMLWWGVARQVPGLKDKFGQFTPKYDEWKNKIKQLSTELPLTTNQIGDMVTAAARMDIQENELEDFIRLNTQMATAFDAENPDELVELFGKVQKNFKLTTKDAKELADTINYLDDNAISKGTDIINFLNNTSGIGNLVKISEKNLAALGSTLLTAGNEASTSAKAIESTFNRLSKATRMKPVNNGLKALGLDPKAIQKAMVKDAQGTLMMIVEKIKKLPKHLRAGVISDIAGGNYNTQLAGLVANTEEWRRQIELANSEEAKNSMAREFQTRMTTLSAKWQLFKNRLFNVNSSVGASLKDTMTSLMDGVGYLLDKIQTWIDKHPKLTSTIAKTAAAIGGSLSLLGALSLALSFILYPAARLFLGLSKLNVILHKFSGHLSSAGWLILRGLLSPLKLIALAISPLGIVKCVGLRPTYIGLYVVISITKLKQA*	hallmark_hmm	common_virus	C45	9645	695664	705309	GCA_003352345.1|CP031236.1@region_695665_705309@tool_cenote_CDS_0014	shell	direct	moderate	1292	0.928	GCA_003352345.1_00704
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1211786	1212304	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	1	519	GCA_003352345_1_1_1141	GCA_003352345_1_1_1141	+	1914782	.	cd03311	CIMS - Cobalamine-independent methonine synthase, or MetE, C-terminal domain_like. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to L-homocysteine without using an intermediate methyl carrier. The active enzyme has a dual (beta-alpha)8-barrel structure, and this model covers the C-terminal barrel, and a few single-barrel sequences most similar to the C-terminal barrel. It is assumed that the homologous N-terminal barrel has evolved from the C-terminus via gene duplication and has subsequently lost binding sites, and it seems as if the two barrels forming the active enzyme may sometimes reside on different polypeptides. The C-terminal domain incorporates the Zinc ion, which binds and activates homocysteine. Sidechains from both barrels contribute to the binding of the folate substrate.	MSQIYTQVRKLAELQFAKRLITQIFEYARNKNIKTALHVCRGNWSKDESVLLREPYTSLVDLFESAPDILMLEFSTPRAGELSSLLESEILRQKCILGLGVINPRSDEVETVDQIVQRAEKALNYLPPEQIWLNPDCGFATFSNRPLNGFDIIEAKLNTLNEAKSILRERYV*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0001	cloud	direct	high	518	0.998	GCA_003352345.1_01188
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1212297	1212833	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	512	1048	GCA_003352345_1_1_1142	GCA_003352345_1_1_1142	+	1914782	.	.	hypothetical protein	MYNVPESECFTAKYRAVLRGEEIKLFTPNDSISLYSQVNFDNQSLQKSAVDYFAVSILGGILSSVKAHFAQQRADIVEMEGKIWLNLANPLTLLGVRGYSEQPVINDGKIKIFISSDLTDETFTQLTQNALRLWGSDNICIERNKKFGVKKCGEAPVYGALLFLRGWSYVNNENGGDW*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0002	shell	direct	high	536	0.998	GCA_003352345.1_01189
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1212958	1213662	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	1173	1877	GCA_003352345_1_1_1143	GCA_003352345_1_1_1143	-	1914782	.	PDB:2FJR_A	Repressor-protein-CI	MTEKDNFPERIEFVINRLNGPSEFARQTGVTLSTITRWRKGEAEPSRTNLVKVADKANVKIEWLAAGRGEIERTTPDEKLYKIAEPMSQYSHSAIDNDFEFIDDCRDVIVTAGYGGINGDYPEIKKTKIESEWLRARGLKAEDCGKYKVCGDSMDDTLKDGEDIIVNHASKTLIDGKIFVLNNQGSMLIKRIQRTFSGVELLSDNSAYRPIKLTAEEADSLLVIGQVVLGYRNF*	common_virus_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0003	cloud	direct	high	704	0.999	GCA_003352345.1_01190
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1213850	1214116	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	2065	2331	GCA_003352345_1_1_1144	GCA_003352345_1_1_1144	+	1914782	.	COG3423	Predicted transcriptional regulator, lambda repressor-like DNA-binding domain [Transcription]. 	MSVLESTKKTAVNWHKADILAELKKKGWTLRSLAAEGNVSYSTLKTVFDKSYPKMERLVANAIGIAPEIIWAERFAERNRKPVLTNKF*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0004	cloud	direct	high	266	0.996	GCA_003352345.1_01191
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1214162	1216141	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	2377	4356	GCA_003352345_1_1_1145	GCA_003352345_1_1_1145	+	1914782	.	PDB:1BCO_A	Mu-Transposase	MVGLELKTHYSVYEYAEFGVSGLPKAPKNIQAFFERNKCKARKRQGRGGGVEYELASLPMDLQTEIRNKFAEVVVATKPKQLPTVKNLNLADLTTKQREIADARMALVAYVGELEQVQSRIKAITHLCNAAKCGEISADLMALVSKANSKNGNNCGRVLSPRTLNQWVIDYHKCKTAEERLRALAPGQRQAQKLEELAWLPDFLVVYRNTNGVNVTEAYAIFKAHWQAHYADQPLMMARLPSLDRVRRGLSKLPRHIREIGRKTGASLRALNTYVKRDWSVLKANDVWVGDGHSMKMKVQHPDHGRPFIPELTLVMDAPSRFIVGWSVSLAENALAVADAIRNGIENHGIPAIYYSDNGGGEKNWTLDADITGILPRLGINHQTGIPGNPQGRGIIERVNQTLAIRIARQFETYHGRGADRGTVRQTSTAVISLDKAIRQGRTELTNKQRWAVGKLPTWKQFIDAVEEGIRWYNNEHIHREIGCTPAQKRRELLADTELLLITPIEARDLFRPSVLRKAQRGWVSVFNNEYFSQKLLDVDGKSVQVAIDIHNPSAVIIRDESGAFICEAILDGNKRDAFPMSYVEKARKDRHQRRAKLKQEQLDEINEELNPVISIAHNQGAELLHGLRAKQVNRFDEDEEIALLPSELRRQQRKVSGG*	common_virus_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0005	cloud	direct	high	1979	0.999	GCA_003352345.1_01192
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1216145	1216351	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	4360	4566	GCA_003352345_1_1_1146	GCA_003352345_1_1_1146	+	1914782	.	.	hypothetical protein	MKKRTITKVHCGRVEYNKKPHFAYRLIEWEGKTVEVRPAQGFLAVYTLKGNFICHASRLITNTFGALA*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0006	cloud	direct	high	206	0.995	GCA_003352345.1_01193
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1216348	1217223	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	4563	5438	GCA_003352345_1_1_1147	GCA_003352345_1_1_1147	+	1914782	.	COG2842	Bacteriophage DNA transposition protein, AAA+ family ATPase  [Mobilome: prophages, transposons]. 	MKEQLARFMQQKGLTQTQVAKALGKSNAVISQYLKGIYKGVTKDIDEAVDRLIKREKDKVVERNFNSEFVPTYAAERCIDVVHIAHVEGEISVVYGAAGLGKTKALKQYVSQNPETIFIEVEPSCSPKVLLKNLCHQLGLNETGANHELFTRITEKLGEGRLIIVDEAELLSTKSLEYIRRIHDLTGCGVVLAGMPRLLVNLKGKYGELAQLYSRVGLACDLGNQLSEDDIHKLAENGLGTDEFNDILFKASHGNARRLTKLMRGVIRVAEMHGKQIDEKLINSYAGMLIH*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0007	cloud	direct	high	875	0.999	GCA_003352345.1_01194
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1217240	1217452	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	5455	5667	GCA_003352345_1_1_1148	GCA_003352345_1_1_1148	+	1914782	.	.	hypothetical protein	MSEQMNRVAYALRREGVQIVESKDGHFPKMVILNPSRRLQEKGVQMTTFKNGVHIVRNVANEQGVMVYWA*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0008	cloud	direct	high	212	0.995	GCA_003352345.1_01195
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1217462	1217653	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	5677	5868	GCA_003352345_1_1_1149	GCA_003352345_1_1_1149	+	1914782	.	PFAM:PF04936.11	host-nuclease-inhibitor	MPKYRQIYAVYRGEENLGDGTAEELAKKFNIRKKTLYAMGSEAILKRNKGNRLIVIKLDKEEV*	phrogs_hmm	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0009	.	unmatched_CDS	none	0	0	.
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1217656	1218273	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	5871	6488	GCA_003352345_1_1_1150	GCA_003352345_1_1_1150	+	1914782	.	pfam11363	Protein of unknown function (DUF3164). This family of proteins has no known function.	MKVMIEGKEYWRDAKGNLTPAELVKEIDKARDALVREWVEKGVSLNKEMRNFKDGIFGDIQAFIELSAEKYNAKVGGSKGNITLYSYDGKYKIQRAINDHLQFDERIQAAKVLIDECLNEWSEGSRPELKALIERAFNVDKEGNLNTSRILGLRRVDIQDPRWQNAMQAISESVQVVSSKAYVRLYERVGESDQYVPIALDVAGA*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0010	shell	direct	high	617	0.998	GCA_003352345.1_01196
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1218382	1218591	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	6597	6806	GCA_003352345_1_1_1151	GCA_003352345_1_1_1151	+	1914782	.	NF033650	ANR family transcriptional regulator. ANR family transcriptional regulators include the AggR-activated regulator Aar. The name ANR (AraC Negative Regulators) refers to an effect on, rather than homology to, certain AraC family transcriptional regulators.	MEKLRTYKDFSTLAVEMERAGAWETAEAAWQRAAIVARKSENEEWALNRQKMCAHYVKNPSRRPEVKHG*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0011	cloud	direct	high	209	0.995	GCA_003352345.1_01197
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1218584	1218748	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	6799	6963	GCA_003352345_1_1_1152	GCA_003352345_1_1_1152	+	1914782	.	.	hypothetical protein	MAKYVVRFYCLVEAVVEAESNEQVLEMCDLNVCDVNKLPHTITEIDDVVEVEEV*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0012	shell	direct	high	164	0.994	GCA_003352345.1_01198
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1218745	1219026	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	6960	7241	GCA_003352345_1_1_1153	GCA_003352345_1_1_1153	+	1914782	.	.	hypothetical protein	MTELTKDDLHVGHVYSAKSPKEHGFPPLLGDRQILWKGLIYDNKEGFVDGLQYDSPSVRNGRHYPKISITKFLKWAEADITDTMPKGKWRYAR*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0013	cloud	direct	high	281	0.996	GCA_003352345.1_01199
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1219023	1219190	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	7238	7405	GCA_003352345_1_1_1154	GCA_003352345_1_1_1154	+	1914782	.	.	hypothetical protein	MTEQEKVRLDEILQQAAMQLIKAQTYLRTGKAQYAAVYVENVQNLLPGLRMRLGR*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0014	shell	direct	high	167	0.994	GCA_003352345.1_01200
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1219196	1219570	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	7411	7785	GCA_003352345_1_1_1155	GCA_003352345_1_1_1155	+	1914782	.	.	hypothetical protein	MEEKKYAVTFEFKVGVSDDDLTFNVNTEYHQMTALYVKDAMTCLMFKLPEIVRAGWIVLEGMDDNVKSGFEHKIKLDFCTQDGDEWEVSAKVENPNETGRMLIGFIEKILLKDPVIDEILQRAK*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0015	cloud	direct	high	374	0.997	GCA_003352345.1_01201
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1219582	1219914	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	7797	8129	GCA_003352345_1_1_1156	GCA_003352345_1_1_1156	+	1914782	.	.	hypothetical protein	MSNKTEPKVRVALEVEMFESQRDALEISSKTKVLEYGRITRFDWEGDVFNEVDTYRQFFDLVPSKLMVIATQYEYLKDENFTLELQLAIKRAITPIIKAKRKAILEGKNE*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0016	cloud	direct	high	332	0.997	GCA_003352345.1_01202
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1219907	1220149	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	8122	8364	GCA_003352345_1_1_1157	GCA_003352345_1_1_1157	+	1914782	.	pfam04448	Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	MSKNNGWIKCSERLPELYHTVFSGIVSKDVLLYGIPYNDGEEEMRVFIGYMTEDNEFHTDDIGKCDVVTHWQPLPQPPID*	mmseqs_cdd	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0017	cloud	direct	high	242	0.996	GCA_003352345.1_01203
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1220159	1220455	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	8374	8670	GCA_003352345_1_1_1158	GCA_003352345_1_1_1158	+	1914782	.	.	hypothetical protein	MKYQWEYIVFGSKEPTVEDIEAKIKQSESKKYESDHDVVDSLVEQIVEENNWDWELEENENIYISIFPKGKPEEQELFDVHLSLVIQATAYHEWSGLD*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0018	cloud	direct	high	296	0.997	GCA_003352345.1_01204
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1220568	1220942	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	8783	9157	GCA_003352345_1_1_1159	GCA_003352345_1_1_1159	+	1914782	.	.	hypothetical protein	MQTKIIQWLADDEDVGLSSKCMAFVIGFDVIPRRKSYPFDPSDLSRCVKLLERVPKMRDYLYKMKEISPIWAKLVEHWDELECLLNEEKGSGRCPKTYQLMKKLTEDDQNVVFRHGGFSIRMGE*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0019	cloud	direct	high	374	0.997	GCA_003352345.1_01205
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1220946	1221257	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	9161	9472	GCA_003352345_1_1_1160	GCA_003352345_1_1_1160	+	1914782	.	.	hypothetical protein	MDIEYEWLLIDDLDDEEPEKEEVEKIIKDSEWLEFDRKKRPFYLESSVAEELFMRNYSKWECYEEDQYVFLAIREQGSERYSIFRVSSWYRLAPKVNEICFDD*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0020	shell	direct	high	311	0.997	GCA_003352345.1_01206
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1221364	1221915	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	9579	10130	GCA_003352345_1_1_1161	GCA_003352345_1_1_1161	+	1914782	.	.	hypothetical protein	MKLCRCPVCHSDIHLDALLEDDAGREMLGIITNLRGDNARALVSYIALFRPEKSALSNSRALKLMQEVLEMYQPSPLLSHALTETVSGVMKNRRETRNVVALTNHNYLKKVYEGAKPLFAVVRNEQGQNAVKNSEKLAEDKRTDAIQYIERYAVIGKLEYVEKTPEYLIWKAWKEEQNATTNP*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0021	cloud	direct	high	551	0.998	GCA_003352345.1_01207
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1221896	1222312	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	10111	10527	GCA_003352345_1_1_1162	GCA_003352345_1_1_1162	+	1914782	.	COG4382	Mu-like prophage protein gp16  [Mobilome: prophages, transposons]. 	MQPQTRKQMIQKIHIGKGMLKMTDDQYKRFLLDTVDKHSCTVMTDAELMQVLRAIKAKGVVFSVKNAPKRPAPRADKAKYMAKITILLTEYGLPQSYADGMAKKAFNIDFVHWLEVWQLKKVVQMLAVYDRRKQNVKN*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0022	cloud	direct	high	416	0.998	GCA_003352345.1_01208
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1222379	1222723	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	10594	10938	GCA_003352345_1_1_1163	GCA_003352345_1_1_1163	+	1914782	.	.	hypothetical protein	MKKLLIAMVCGLISVSAFSMTDKAKGELNKALQGNYQALRNVAFSMKDGSFGHDHNPIAGCALRKITLIVAQNETDTSDYGNEYVDCKALSPDESEKAWKMTLQLLPQVLQLKE*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0023	cloud	direct	high	344	0.997	GCA_003352345.1_01209
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1223233	1223451	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	11448	11666	GCA_003352345_1_1_1164	GCA_003352345_1_1_1164	+	1914782	.	.	hypothetical protein	MEKTSVKTLEKTSVKTLGKTPVLDDIEGFTRCEARYTRNKDKSERRLIYAKDYGRKYWIFPKKSKKPKTTKH*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0024	cloud	direct	high	218	0.995	GCA_003352345.1_01210
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1223565	1223990	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	11780	12205	GCA_003352345_1_1_1165	GCA_003352345_1_1_1165	+	1914782	.	COG5566	Transcriptional regulator, Middle operon regulator (Mor) family [Transcription]. 	MQSKFESVADYLPEIVLEMVELVGFTDVEKIINQFGGATFRFTDGAVYFPRLKALIGLESAVKLRHYFQAEEVYIPRCEVALRLLRNERLKADFDYITQTEKKSGRTAMLELCPKYRLSDRQAWEIVRTQQTPQYQQAALF*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0025	cloud	direct	high	425	0.998	GCA_003352345.1_01211
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1224086	1224589	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	12301	12804	GCA_003352345_1_1_1166	GCA_003352345_1_1_1166	+	1914782	.	CDD:COG3926	Lysozyme	MSLSFKQIFDRLIGHEGGYVDDPRDPGGETNWGVTKRTAQANGYTGNMKTMTRQQAYEIYYRAFWLRYNCEQMPDAVAYQFFDAAVNHGFGNASRMLQRAVGVLDDGIIGKYSLEAINRNPISDTLMVLNGERLNFYTRLKNFDRYGKGWVNRVAQNLRYGAQDNEV*	common_virus_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0026	shell	direct	high	503	0.998	GCA_003352345.1_01212
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1224579	1224758	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	12794	12973	GCA_003352345_1_1_1167	GCA_003352345_1_1_1167	+	1914782	.	.	hypothetical protein	MKFSFKNIFNLFSRVFKRFNPKIYQYKKRPKKYSKNAWSYIAKGKATPATALYAYIGAL*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0027	cloud	direct	high	179	0.994	GCA_003352345.1_01213
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1224758	1225051	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	12973	13266	GCA_003352345_1_1_1168	GCA_003352345_1_1_1168	+	1914782	.	pfam10841	Protein of unknown function (DUF2644). This family of proteins with unknown function appear to be restricted to Pasteurellaceae.	MRKFFELFTNDNGRASTTGFIQFFGFLVLAGVLVYSVYLGRDNATDLYLYFAFFCGGSAATKGAVMAYQSKNKRNNNQNYQPRQRQDDDDGYQRPGL*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0028	cloud	direct	high	293	0.997	GCA_003352345.1_01214
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1225060	1225311	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	13275	13526	GCA_003352345_1_1_1169	GCA_003352345_1_1_1169	+	1914782	.	.	hypothetical protein	MNLLHIAMTALSSAILLLWVMWRRAKAKTANLEQAKKQLETQNQVLQTRVNNQKERRKNEENAHSSTRDELIDSMRKSNDLRD*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0029	cloud	direct	high	251	0.996	GCA_003352345.1_01215
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1225323	1225679	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	13538	13894	GCA_003352345_1_1_1170	GCA_003352345_1_1_1170	+	1914782	.	PFAM:PF07889.11	lipoprotein	MALAKSMPAVKTRPKHYAKLKRTTTHGGQSVGARMELHINGIMVFNALVSIAVFFIGLWFKRLDGEFKQLHDEVDQVKRDYLSKEVAGIVNKNVMEKLDAITKQLNSITEKLDRKADK*	phrogs_hmm	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0030	cloud	direct	moderate	254	0.711	GCA_003352345.1_01216
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1225679	1225945	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	13894	14160	GCA_003352345_1_1_1171	GCA_003352345_1_1_1171	+	1914782	.	.	hypothetical protein	MSARERKRLEHEAEQALTNQKLDEILNLTREVNRKIDRLDDRVDDIDTRLEMLEARMDKLGIKSVMAGGLGGLVVSVGFELIKAKFGG*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0031	cloud	direct	high	266	0.996	GCA_003352345.1_01217
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1225948	1226448	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	14163	14663	GCA_003352345_1_1_1172	GCA_003352345_1_1_1172	+	1914782	.	pfam08822	Protein of unknown function (DUF1804). This family of bacterial protein is uncharacterized.	MAHDEKTKAYVRRYYVFDCLTLEQASEKAGVSYNTARRWKKEAEARGDNWDTVRDANTMASGKVEDVARGMLTTFVIYFEKTMEELRHAEELPVSDKAKLIQGLGDSYSKMVASSKRLLPEVSELATAWKVIEMVTNLIKTKHPDLLPAFLSVLDDLEGIVKQEFK*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0032	cloud	direct	high	500	0.998	GCA_003352345.1_01218
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1226448	1226594	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	14663	14809	GCA_003352345_1_1_1173	GCA_003352345_1_1_1173	+	1914782	.	.	hypothetical protein	MEKQSQTIVHKHYYFRWIVQFVCIVCAFKLMAAGIKGWGWLLFIAVML*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0033	cloud	direct	high	146	0.993	GCA_003352345.1_01219
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1226595	1228250	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	14810	16465	GCA_003352345_1_1_1174	GCA_003352345_1_1_1174	+	1914782	.	PDB:4BIL_D	Large-Terminase	MKYKDFEKQLEQLRAELQRNIEANFEGWDDKPHAIAERRQKVLDKEKGFEYFVQAYFPHYVRSPHKSQLHEYLFKNLPLSVEETDKSVRQAIAAPRGEAKSTICTQLFPLWCLVCNLKNYIIIAMDSRDQAYGMLEAIKVEVESNPRLAIDFPEVSPGKVWRAGAIMMGKGQKVEAVGAGQKLRGRRHGAYRPDLVVLDDIENDETVETPEQRNKLHKWILNAVLKLGGPGEKSDVIYVGTILHYDSVLNRILNTKGWRRVRFKAILRMPDNMALWDEWENIYLSEDGDDDTLSDLFYQQHKADMDAGAVVSWLARPILYLMKIRASDGHASFDSEYQNDPVSGDDAIFANSLRYWTELPNNLIYFGAVDPSLGKAGASRDPSAILVGGYHRETGKLYVVEAQIKKRLPDLIIEDVIRLHTQYNCHRWFVETVQFQEFLKTELVKRSAARGKPVPATATKPNSDKMLRIESLQPHIANGLILLHRSQSTLESQLRHFPKADHDDGPDALEMLWRNAVGSSAAIEWIGLNQLNEIESDEYEDEDDLYSIWKH*	hallmark_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0034	cloud	direct	high	1655	0.999	GCA_003352345.1_01220
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1228262	1229902	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	16477	18117	GCA_003352345_1_1_1175	GCA_003352345_1_1_1175	+	1914782	.	PDB:5NGD_C	Portal-protein	MGFIDKVKNLLKGNETEPTQTDDAEVTATGRVLDDHPSAKITPSKLKQILEDAENGDIQAQHQLFMDIEEQDSSIAANMMTRKRSVLTLDWRIVEPRNATPAEEKLQAEIDELFYQYPNLEDLFIDLMDAVGHGFSALEIQWAQVDGKWVPKGFKPCPQSWFKLDKDDSLLLRTPANQMGEPLRPFGWVVHRHKSRSTQLARDGLYRTLAWLYMYKHYSVRDFAEFLELYGMPIRIGKYGAGATNAEKRTLLRALAEIGHNAAGIMPESMQIELHNVANAGAASGNNPFLQMVDWCEKSIARLILGQTLTSGADGKSSTNALGNVHNEVRRDLMISDAKQIAQTITQQIILPYLQINVDPNIAPHRVPYFEFDTKEYEDLSVFADAIPKLVSIGVQIPEKWTRDKLGIPEAQDGEVVLKAVQSDFNPDLKTPGKSTALSAHVVGCQCAGCLGKGARVALSAGNKSETEQDLLDNSLNEALNVIDFNRQLDPVVRQLAAALTACNSYEDASDKLAKIYPDLNNAEHQRYLTQAVFLSELLGVSNAKR*	hallmark_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0035	shell	direct	high	1640	0.999	GCA_003352345.1_01221
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1229889	1231166	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	18104	19381	GCA_003352345_1_1_1176	GCA_003352345_1_1_1176	+	1914782	.	PFAM:PF04233.13	minor-capsid-component	MPSVNFVLGLEPKKAIEFLRDKKAILGHFDEDALMDSARAKATRIANLSSLEMSKDIYQSLVDAQTQGLPFSEWKKGIFEHFKKKGWIAGYDKEYLLADPKTGEYFGSPRRLETIYRTNMQSAYSSQRYAEMRDNADNRPYWQYSAVNDDRTRPSHSAMHGLVYRYDDPFWATFYPPNGFNCRCSVIALAERDIKRRNLVVGDSADRLIDYDRKINSTTTEKTTAFKLSDDKWITTDRGFDYNVGRTVYKPNLALYPESLAHQFAKREMGGEGFKFDFKQFEKEFSPYVDDYKKLKGKNEREAFLNPIRERFKMDYKFIAGVLNEDTKQQIKTDLSTVWLSDDSLIKQIANRYGQDFDFDDYARLPDVLYSPDKIEQDGKNTFKFYKEVDSRRLIAVIKVLNGSNEIYLTSQHLASDRQWRKAFK*	hallmark_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0036	shell	direct	high	1277	0.999	GCA_003352345.1_01222
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1231277	1231762	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	19492	19977	GCA_003352345_1_1_1177	GCA_003352345_1_1_1177	+	1914782	.	PFAM:PF05069.12	Virion-morphogenesis-family	MIDVKINNEKELIHALSQLAQHVKYNVPLMRTIAGTMQSAVDQNFEAGGRPAWLGVKSRPDGKPLIDSSALRNSIHSSWDNNEAQVGTNLKYAAIHQFGGKTSPHKIKPVTKKALAFGGIVRKSVDHPGSEIPARPFLVLTPQDEDDILEDVQAYFRSVVK*	hallmark_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0037	shell	direct	high	485	0.998	GCA_003352345.1_01223
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1232014	1233051	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	20229	21266	GCA_003352345_1_1_1178	GCA_003352345_1_1_1178	+	1914782	.	pfam10123	Mu-like prophage I protein. Members of this family of proteins comprise various viral Mu-like prophage I proteins.	MKLTLAACSFEIDKAKYGRIHLLPYGKFRATDGRPTDVEAWYVTDTNGADVVALANNQRNPLPIDYEHQIIHSLKNGKEAPSAGWMEYFYFTPQGIFADVRWTDKAADYIKNGEYRYISAVFAYDTGGYVRKIFHAALTNTPALDGMEEAMVAASVNLLQEDNPMDKKLLAALCALFALKADASEADITEKVTALSAAKGDSPVGVLDVYAKLAEKEQSVAALSTQVGNPDPAKFVPVDQVVALQANFNALKTSVEADKKEALITAALSQGKLAPALKDWAESLSVEALSAYLEKAPAMAALSGEPQAKGDPEQKMAALSAAESAAAKALGLSEKDYMATYKEQK*	mmseqs_cdd	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0038	shell	direct	high	1037	0.999	GCA_003352345.1_01224
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1233051	1233974	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	21266	22189	GCA_003352345_1_1_1179	GCA_003352345_1_1_1179	+	1914782	.	PFAM:PF10124.8	Major-Capsid-protein	MDKFKKSELLKALDEAFKKDFASGLNVINPQWSEIAMKIASSTETNTYGWLGHFPKLQEWVGKRRLRKMQAQGMQVSNKLFESTVAIPRTNIEDDQVGLFSPMVKQMGQSAAELPDDLVFGLIKQGKSTLCYDGQNFFDDDHPVFAEVDGTGNQTTQSNITKGSAAGKPAFYLLDTTNAVKPFIWQERLTPEIETKFDPSKSDTVFMEDTYIWGVRARGNAGFAFWQLAHRVEDSELTEEVLMSVLAKMKSLKGDGGKLLNIRPNILLVPPALEYTAKRLVEADIINGTSNVLKGALKVMVSSQIVE*	hallmark_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0039	shell	direct	high	923	0.999	GCA_003352345.1_01225
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1234038	1234343	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	22253	22558	GCA_003352345_1_1_1180	GCA_003352345_1_1_1180	+	1914782	.	PF17891.1	Mu-like prophage FluMu N-terminal domain	MAKKQQNKTDDEVKTDTSENTAETDRTLDKPDDAPKGSDVIHPIAYAVTLRAIHPQASYGRCGYRFNKESAVEIPVENLTGEQVIMLAEDSWLELIPICDK*	hhsuite_tools	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0040	shell	direct	high	305	0.997	GCA_003352345.1_01226
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1234353	1234784	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	22568	22999	GCA_003352345_1_1_1181	GCA_003352345_1_1_1181	+	1914782	.	CDD:cd08053	head-to-tail-adaptor	MHYASAEDFVLRVGEVQAIELTDRDLTGQVNDNLLDVALSDSSSQIDGYLAARYTLPLVSVPQNLVRLCCDLARYRLASMSRVTIPEEIITRYKLSLKELEDISVGKISLGLPPTENNDANEQDNGVIFTNPKNRIFARDNRN*	hallmark_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0041	shell	direct	high	431	0.998	GCA_003352345.1_01227
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1234768	1235412	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	22983	23627	GCA_003352345_1_1_1182	GCA_003352345_1_1_1182	+	1914782	.	PDB:3FZ2_G	tail-completion-protein	MITEIENALVDRLTRGLGQLANTVKSYGGELDDESLGTGRLPMVLVTFGGARIEPMGVRGTAFRTSAKFVVIVAVRSLRSNQAARQGGVDKREVGANQLIYAVRRLLDTQRLGGLVKPLKPLAIRTLFNNAQFRTEKVTAYAIEYEAAFDDITPLEDGLYPEETQDPTNPDFVFTHYAAELSPSSPILEHVDGKLYEPNNDAEVGFSVKTKDKT*	hallmark_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0042	cloud	direct	high	644	0.998	GCA_003352345.1_01228
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1235409	1235585	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	23624	23800	GCA_003352345_1_1_1183	GCA_003352345_1_1_1183	+	1914782	.	pfam10948	Protein of unknown function (DUF2635). This is a family of phage proteins with unknown function.	MIVKATPGVKVPLENQPHAYIEQEPVEVENTVYYQRRIADGDLIEVQPTRKQRGTGND*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0043	cloud	direct	high	176	0.994	GCA_003352345.1_01229
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1235578	1236987	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	23793	25202	GCA_003352345_1_1_1184	GCA_003352345_1_1_1184	+	1914782	.	PDB:5LI4_E	tail-component	MTNIEFEKIPNSLRKPGVYTEYNAKGSVTTLPTNEQEVLIVAPMIGGTTAFTQPVRVYSDLDAAQAFGAGSWAHLMTRIAITNNSLIRLSVMGLADSSSGVAASGSLVLTGTATTQGVMTANIAGVDYKVAVAKGEKAKDVAARLNAVINGATDCPAKASVTESTITLTAKCKGAIGNEINLTATNTAKDMTLSATAFANGAENADLAPALASVAGTHYHIIISPFADDKNAKALREHLEAVSAPLEKKPAVGVLAWRGSMATGTTYTEKINSERVTCGWYKGAIESHALIAAGFGAVIAGEEDSARPLNTLEIKGLTEVDPTQTPLLTEANQALYHGLTPITVVNHRVRIMRAITTYTKSATNTDDPSYLDLTTIRTLDYTRKAIEQRIELRFPRAKLSARTPDKVRSEILDVLLRLEKEEILENVAQHKAKLLVQRNGVDPNRLDCVIPTDVVNGLHVVANRIDLIL*	hallmark_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0044	cloud	direct	high	1409	0.999	GCA_003352345.1_01230
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1236997	1237365	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	25212	25580	GCA_003352345_1_1_1185	GCA_003352345_1_1_1185	+	1914782	.	PFAM:PF10618.8	tail-tube-protein	MAQEFASFGIVEVDGQEIELTKLDVKTVTGRKPVKTINRKGRVKGFAKGITEYALSITVVVPLNAAEPDWDNMTDAKITVEEENGKRISYTGCFTTETGTSYTVDSEEVRDLQVVATDKVEE*	phrogs_hmm	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0045	cloud	direct	high	368	0.997	GCA_003352345.1_01231
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1237365	1237712	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	25580	25927	GCA_003352345_1_1_1186	GCA_003352345_1_1_1186	+	1914782	.	PFAM:PF06528.11	tail-assembly-chaperone	MKTRLKLGVLYNGTLHHDVLVKILTVGGECQALEVISDLGLSDKETLSTSEQMLIDLAYLAQQVEFDGIPREVVTPAFLLDNLATDDYVLINNEINQLRKKRMDVSEDQETANEA*	phrogs_hmm	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0046	cloud	direct	high	347	0.997	GCA_003352345.1_01232
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1237990	1240260	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	26205	28475	GCA_003352345_1_1_1187	GCA_003352345_1_1_1187	+	1914782	.	PFAM:PF10145.8	minor-tail-protein	MANMDLSLTLKAKDYASGVIKSVENSVSKSTKNIESQAQRSATTQQRAVRQTAQVTEQSYRQIQQAARNREMLGVRSERSIQSEINRTRSAYDQLKRSGIASGRELDRAAVATKRRIAELNAEMGKVSMGQRLGNVGRGIAGLAAGATAAGMVLAQPMKKQMDYDRSLAMTANTAFAERDVAGRIAGKAELNNAVKSAVEIGGGTKEDALGALDTMLASGAVKAETAMKLLPTLQKGATATGASTDDLAKIAISAMQQFDISEDKIGEVLDKAVAAGQAGNFELADMARWLPQQMAAGKSAGLKGMSGFEALLVANQQARVTAGTSDEAGNNLVNLLAKLTSKETSDRFRKLDIKGKDGKDHGVDFIASMEAQKKKGKNSIEAFMSIMDQVIGQDGKYQALQKKLKNAKKEDQAQVLNEMTNLVEGTAIGQIISDRQALMALLGIRNNVSLGKEVKESLDKSEGAVETSHAVIKDTNSYKVEDAKNNVDFAQMEGMKGFNDALGDVSVKIAEYAKAYPDLTGKLVTAGTVVASLSAAAITAAGSLRLLGGKGGLWLGAGDALSKGAGVTGVAGGAAAAANTAKKGSLAKFGLGGLPLLVFGAMLEGSENYAPYMAQQEEQREAFDAQHKDAKQQFYASAYPAKSAFQYAPPMPKPEKSVWSLASGGYALGDAAKRKEIADERLKRGTLTKDEYNRRVQVPDYKTEFQQLGNTITEGMKQAVESQNFTIQNQIRVDLDGRTIAESTSENQYRELKRG*	hallmark_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0047	cloud	direct	high	2270	1.0	GCA_003352345.1_01233
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1240275	1241651	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	28490	29866	GCA_003352345_1_1_1188	GCA_003352345_1_1_1188	+	1914782	.	COG4228	Mu-like prophage DNA circulation protein  [Mobilome: prophages, transposons]. 	MPIQQASYRGVRFDVLSVDDNLERATITHAYPFVNGGDIEDLGLNPLTIQLQAVFYGEGYYTDFKRFLSALEKQGAAVLVHPIRGRLQNMLCTSAYFHHEADFVDYVTVSLSFQEATPAKPIFLFNFSVLGLIDELLTKLEDLVDDVLELYGTFMEGISFAANIKSRLLGSFGALYGCFEQVRDLFDMDKKKYVISANTPSSKDAFRQQGGNAVREMAGMIHDGLTAIANRNDLTVRAKFDEVTRTVKSLLEIAPNLSNGKNSKSNTLKSLTSSLTAQDTKEIFCAVQLLATANVLKIATRFIEDDSLIPSEIDYIVTESRLQALATLNTVRALVQAEQNAMTLHYVKDDFGLMSLSAKKQTGARQLQTPNTGLYTQAYNTAEKLRQQSHKLTQLALAAINRKPPLIIRRVEFDSTIQQVAHSFYGDYTRAGELLRLNPHIRYPNFIARGEVLNGYAK*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0048	cloud	direct	high	1376	0.999	GCA_003352345.1_01234
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1241635	1242768	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	29850	30983	GCA_003352345_1_1_1189	GCA_003352345_1_1_1189	+	1914782	.	PDB:1WRU_A	Tail-protein	MATQNNGYPFNNEIVVEIDGKQHKNWKSYDIDSDFLIPADAFSFNVGVPSDKTVLEDYSGKTAKVLINGELVLTGIVDTTQHSISKTDRTFSLNGRDKASILVDCSAPITNVKGLTVLDAIKKMVEPLGIKKVELRAESNPTLDKVDIDIGETAWNALIHCANSAGLHAWFDPTGTLIIGGADYSTPPVATLCCTKNGKRNNFTQASLTTDVSQSFSEITFLAQRHGRSGDNNKNDLKWVFKDNAVETYKPKTVIVPDVENLEALKKWAKKYIADSILNSFTLTITVPDHKTQDGVLWTPGQRVHVICEEYDIDAIFFLMGRRFALSRTGGTITELRLKQDGVWTPDAYVNKSKAARKRKGKKGKKKKGALIVLDGD*	hallmark_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0049	cloud	direct	high	1133	0.999	GCA_003352345.1_01235
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1242770	1243405	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	30985	31620	GCA_003352345_1_1_1190	GCA_003352345_1_1_1190	+	1914782	.	CDD:TIGR01644	phage-baseplate-assembly-protein-V	MRRLGQAIRQHTESALGAVRQAFRGQLNLVKSADNIQKVQVSGLADETLQDVELMQQFGLTSVPPAGTQVVVLPMGGETTHSIVIATENGSFRVKNLKSGETAVYDESGSTIILKQGRLIEIDCDILKITATTKVEISSPVVETDRVFTAQGQINGNGGMAVQGGSGASFTGNVTQTKGSFTTDGDVTANGKSLVSHTHRGDSGGVTGQPQ*	common_virus_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0050	cloud	direct	high	635	0.998	GCA_003352345.1_01236
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1243412	1243825	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	31627	32040	GCA_003352345_1_1_1191	GCA_003352345_1_1_1191	+	1914782	.	COG4381	Mu-like prophage protein gp46  [Mobilome: prophages, transposons]. 	MKGGVELSPRLFLSPFFYSVSMDREISPLTGDYTNLHISTLQNAVYIRLTTPLGSWWANGRVGSLLHTIQREKDLSRVGMLAQQYAEEALQPLIDDGRASDIIVTHEQPHNGKVILSISVTDSRGEQYTFKHPVNVI*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0051	cloud	direct	high	413	0.998	GCA_003352345.1_01237
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1243840	1244904	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	32055	33119	GCA_003352345_1_1_1192	GCA_003352345_1_1_1192	+	1914782	.	PFAM:PF04865.13	Baseplate-J-like-protein	MFIVPTLEEIRASILRDYQTYYPNADTSEDSDAYARASSLAACAEGIYAHQKWLIKQFFPDTADTEFLEKHAGLCGLRRRNATYAAGKGATVSGNPDAVIAVGLQIKTEDGRFYETTESAVIPASGSVIVAVRSLATGAVQNIKTATKGSFMAAPVSVSTDVVLNDVVGATNAESDSSLLERLLNKIRRPAAGGNKYDYKDWALEVDGVEQAYVYPLRRGLGTVDIAITADNGVPSDDTVRRAQEYIDQERPVTAKESKVVKPDVTKINFNIQVKISGVALNDIKTAIRNALTDYFNGLIPGDDLIVSQCEAVVSDLIGVVDRRFVAPNANRKADVINKIEWFRLGEITVTEMG*	hallmark_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0052	cloud	direct	high	1064	0.999	GCA_003352345.1_01238
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1244904	1245482	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	33119	33697	GCA_003352345_1_1_1193	GCA_003352345_1_1_1193	+	1914782	.	PFAM:PF10076.8	tail-protein	MQHASVLKQLYPPVSYNINGEHFIAQCEVDGSAFDRLQQSAEEVLAAIEPATSNQMLADWERVCGIKTDLSKSYQERVKRVIVQLNAVGGLSIPYFTRIAESIGYQIQIKEFSPLQNDLPNPGDLVQFRNEQRDSLIYMWRVTVLNGDDNIVYFRAGSSFAGDHLVEFGDPIIEEFFRDLKPAHTYCYFAYQ*	hallmark_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0053	cloud	direct	high	578	0.998	GCA_003352345.1_01239
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1245495	1247093	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	33710	35308	GCA_003352345_1_1_1194	GCA_003352345_1_1_1194	+	1914782	.	PFAM:PF00295.16	short-tail-fiber-protein	MKTLLPEINSADKRFHAGNPATGEQGTRVTDTWLNDVQDRVRDIQAEAHYVLTKAGFTPKNEQQTQLYQAIVKIIDDNRKSASVTQKGEVKLTSDTGLDSEELGLTAKAGKVLAQGIAALRLAMNNYIPLKSRSSSVTSNDENGVATPKAVKIAYDKAVSAEENNLYQKIYVGKHDLELDLTDRQQIINLWGGKYRNNGHLSFAAHNNSNSNITGLPLTNKSPIVMTLYLMGGYSVFYCDYPLLNRRFYSNVNFNNRTLTYNWIEYITSAGDQLINGTISANTPPVNATDDKVVTVGWAKQAGKSYVKKTGDTMTGNLEIDRGDDYAGIILHNKSKIAMIESTPDSENQFLNLIYRTRDYQNVNVIKVPKKTGTLALLEDIKNVHRRDYNRTINGTSNWDNGKSKTITLTGSVTIYPDGRIVQILHLKNFRIMWFDAESPTVGYADPGYRHPLIKIPLWSAMPNKILSAMPQIVRTTHPTTSITYVSEAGEWISAWAIREQGNDKGNVYINTRRFAGGQDEIVDLYVVIEGY*	phrogs_hmm	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0054	cloud	direct	high	1598	0.999	GCA_003352345.1_01240
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1247096	1247686	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	35311	35901	GCA_003352345_1_1_1195	GCA_003352345_1_1_1195	+	1914782	.	PFAM:PF14301.5	tail-fiber-assembly-protein	MAFYINVLDKLGNFEIIDGDLAAVYPHLDFTKLTALTDEQYTQFCQKSTGKVKFINGQFVSEDIKVDLTLLLSTRDILIKQIDNHAAKIYSTWTRFESEYRERQAAAEAFKAANYEGECSRYITDFAQRARLDNKTATNLILTQAAGLEKLQMELANQRMRKYEVKAPNLTLEQLQSIHDDIIKQMDSLMEAYNNG*	phrogs_hmm	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0055	cloud	direct	high	590	0.998	GCA_003352345.1_01241
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1247679	1248167	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	35894	36382	GCA_003352345_1_1_1196	GCA_003352345_1_1_1196	+	1914782	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MANVYLALYKGKKTGLKPAALLARFSDWITRKLTKGPYSHCEIAVERIEYTSGHHYEHELYYDCYSSSIRDGGVRCKEIDLTERDKWDLVLLDGVSEAEVKFYFDSTKGSKYDWWGAIGIVLGIKQKRSKYFCSEWCFNAISGKTQGWRFSPNQLAAIFKKG*	phrogs_hmm	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0056	cloud	direct	high	488	0.998	GCA_003352345.1_01242
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1248172	1248591	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	36387	36806	GCA_003352345_1_1_1197	GCA_003352345_1_1_1197	+	1914782	.	PF13876.6	Phage protein (N4 Gp49/phage Sf6 gene 66) family	MNKLTTEYLNSLVDNAEYVHQGLLTICTITLKNGFQLVGTSACVSAENYDERIGRHIAFENAFAKLWELEGYALKQRIYESQSKEVTLRNGNKGEVVYTSPFGKSLVIEDNGDELPAVHWHNAGGSFYADCKSDLDIIN*	hhsuite_tools	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0057	cloud	direct	high	419	0.998	GCA_003352345.1_01243
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1248926	1249249	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	37141	37464	GCA_003352345_1_1_1198	GCA_003352345_1_1_1198	-	1914782	.	TIGR01068	thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport]	MSEVLHINDADFESVVVNSNIPVLLDFWAPWCGPCKMIAPVLDELAPEFAGKVKIVKMNVDDNQATPAQFGVRSIPTLLLIKNGQVIATQVGALPKTQLANFINQHI*	mmseqs_cdd	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0058	persistent	direct	high	323	0.997	GCA_003352345.1_01244
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1249369	1250364	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	37584	38579	GCA_003352345_1_1_1199	GCA_003352345_1_1_1199	-	1914782	.	cd12183	D-Lactate and related Dehydrogenases, NAD-binding and catalytic domains. D-Lactate dehydrogenase (LDH) catalyzes the interconversion of pyruvate and lactate, and is a member of the 2-hydroxyacid dehydrogenase family. LDH is homologous to D-2-hydroxyisocaproic acid dehydrogenase (D-HicDH) and shares the 2-domain structure of formate dehydrogenase. D-2-hydroxyisocaproate dehydrogenase-like (HicDH) proteins are NAD-dependent members of the hydroxycarboxylate dehydrogenase family, and share the Rossmann fold typical of many NAD binding proteins. HicDH from Lactobacillus casei forms a monomer and catalyzes the reaction R-CO-COO(-) + NADH + H+ to R-COH-COO(-) + NAD+. D-HicDH, like the structurally distinct L-HicDH, exhibits low side-chain R specificity, accepting a wide range of 2-oxocarboxylic acid side chains. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain.	MKIAIYSTKSYDRKYIELINAKYNFDLEFFDFMLNESTARLAEHCEVVCIFVNDNGSRKVLEKLAALGVKVVALRCAGFNNVDLKAAQELGIQVVRVPAYSPEAVAEHTIGLMMTLNRRIHRAYQRTREANFSLEGLIGFNMHGRTVGVIGTGKIGIAVMRILKGFGMNILAYDPFKNPVVEDFGGQYVELDELYAKSHVITLHCPATPENYHLLNREAFAKMKDGVMIVNTSRGSLIDTQAAIDALKQRKIGALGMDVYENERDLFFEDKSNEVIQDDIFRRLSSCHNVLLTGHQAFLTEEALTNIADVTLSNVYKLKSGKVCENIVLPS*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0059	persistent	direct	high	995	0.999	GCA_003352345.1_01245
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1250377	1251486	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	38592	39701	GCA_003352345_1_1_1200	GCA_003352345_1_1_1200	-	1914782	.	PRK08247	methionine biosynthesis PLP-dependent protein. 	MTQQYAIDTLLAQAGNRSDERTGAVSTPIFLSTAYGHYGIGESTGFDYTRTKNPTRTVLEETIAKLENGDRGFAFSSGMAAIQVLMTLFTAPDEWIVSSDVYGGTYRLLDFSYKNNNSVKPVYVNTASASEIEAAINPNTKAIFIETPSNPLMEECDVVEIAKLAKKHNLMLIVDNTFLTPVLSRPLDLGTDVVIHSGTKYIAGHNDVLVGLIVAKGQELCDRIAYIQNGAGAVLSPFDSWLTIRGLKTLSLRMKRHQENAQAIAEFLKAQPQVESVLYPNKGGMLSFRLQDEAWVNTFLKSIKLITFAESLGGTESFITYPATQTHMDIPESERVARGITNTLLRFSVGIEDVEDIKADLLQAFANLK*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0060	persistent	direct	high	1109	0.999	GCA_003352345.1_01246
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1252078	1252914	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	40293	41129	GCA_003352345_1_1_1201	GCA_003352345_1_1_1201	+	1914782	.	PDB:3EZ9_B	ParA;-dna-binding,-winged-hth-protein	MDFSSISKKPYIITVACTKGGSAKSTNAANIGAFCADHGLRTLLIDTDTQPTLSSYYALTEEAPGGIYEFLTRRDIEPSHIISKTSIPNLDLIQSNDPSNNVSQTLRNAPDGAIRFSHLIKNIDNYDVIVVDTRGTRDITVDMSVLAADILFCPILPHILSAKEFIRGTIGMYQDLETFESFGFKLPPLKAIANCVDNTNDVKFVLNQLHVLFETNFDESKTFLDFSIPAHVAYREAATYSLPVYRHSQAEYPVIKELCCLLLPQFKTLFDKPMKKEG*	common_virus_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0061	shell	direct	high	836	0.999	GCA_003352345.1_01250
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1252916	1254271	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	41131	42486	GCA_003352345_1_1_1202	GCA_003352345_1_1_1202	+	1914782	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MTDKLIASIEAESAVIGALIIDNDKFDEIATLLRSDDFYVSAHKVLFEGVSHLLTQGKPADILTLEQYFKDKKLIEQIGGLAYLAEVIHNTPSASNITAYAEIISRYSKQRRFLTLGQFIVTEMQSSKDEIELTSFEESVDKQYTNIVIEQETDGVADLNASFERILSRMETSSINADPVSGTPTGIIELDRATTGGQPGELIIIAARPAMGKTTFAQTIAASTLDKFPDSPIQFYSQEMPADQLLERFMAMRSRVSLQSIRQATELEEEEWTRLANAMGTIKKDWKGRLLIDDEASLTPHRLRAKVRKNTRLYGKPKAIFIDYIQLMRTGNKTENRNLELAEISNDLKKLAKETGCPIYALSQLNRGLENRANKRPINADLRDSGSLEQDADVIIHLYRDEIYNPDTEDKGIAEIIIGKQRNGPLATVKTLFQGQYSIFENLTTQDRYYE*	rep_hall_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0062	shell	direct	high	1355	0.999	GCA_003352345.1_01251
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1254264	1255952	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	42479	44167	GCA_003352345_1_1_1203	GCA_003352345_1_1_1203	+	1914782	.	PDB:1VZ0_B	ParB	MNNPFIAKNKKQQSQLDAIAKGLNVQPINNQSAAYQTTTATHYPAQSKYITVTLDKLRPYEHNPRKTRNPNFEMIKESIRRRGLDHKPNITQRPGEPFYIIADGGNTRIQALKELFTETQDQRFWSIECLYKPWKGESADSVEAELDLLIGHLIENDTRADLTFIEKALGIQQAKEYYEKKLGKALSSRELSTELEKDGYIISHTLIAKMEKCINFLYPYIPDVLFNGLGHAPIDKLLAIRNNALAIWQNYQFELDVTFDEIWGHSLARCNDDQPFHIKVFQDHLIDEMSSMLGDRVSYEVLYLEIDLDEQKFKKMAQKQHEIQQSVQESIQDVQAFNTPQPQETVLDTLSQPSVVTTPKMTTTEKKSIPAPVLKQASVEISPSFENETEDEEFDETNANSEGLSFDFAKNLTQQFGITPGMSIQEQRQQRAEENGLGFACVGRQPVDDIWKIYPGRQHKVEAYSLALDIAESVGLTDYIEHVVKEPVDYTYRVKPLDKDVSGVAQMCYDFLNLLQTDVHPQTSFTLLPEYLLNTQEIDDTTLVKLFRLIRLVRYIRSEGDA*	common_virus_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0063	shell	direct	high	1688	0.999	GCA_003352345.1_01252
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1255952	1256503	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	44167	44718	GCA_003352345_1_1_1204	GCA_003352345_1_1_1204	+	1914782	.	pfam11198	Protein of unknown function (DUF2857). This is a bacterial family of uncharacterized proteins.	MSMFSNLNQVVLNEILVNLQEGNINVCRNYGFSKQELQEIEKLSTEEVYELANTKAPFAKVEINHDAFWRLVARVRMSSQERRLIDRALMLGASIQMLNSYFGLTTSKVSARRSLLGKQEPMGRKPAATEEEEKLIWDLWQEHKGDVQTIESTEGLELLILIAEETGINLTEIWKLVSRWNAA*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0064	shell	direct	high	551	0.998	GCA_003352345.1_01253
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1256653	1257876	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	44868	46091	GCA_003352345_1_1_1205	GCA_003352345_1_1_1205	+	1914782	.	NF040582	hypothetical protein	METKLQEHGLLFFGNQHETVPTRLLFDPYLTSRAKLAWQLIKYKAREFQSGMFPSYEVLAKLLSDKPYDEAELSRKLVSQTLLLLRLTRWLTLCETVRNEQGQVLGNFYILHDEPMPIIDTIQLNHDYIALLEKSIQHRDNFVRGVANHIVENLLSDNTQWHYISHIDWMRARLQDYQKRPKMDISEQEESTFIQENLLSSNKELSEKTGELSKNHLSSKMELSKIKQSSKKELSTQNDDKSLISGLVPKGNSGFSQYSTGTSIYINTYCTGNADEIDWPTNIQFSSLEKTAIMQAMRGLDLGICKAILFELEQRVAKGEVKKPQGYVVTLIQRAHRGEFKPYLYEQFLATQAQSLSSKNRLSQHDETSLVNNVKADSTIKPMRVQSEEERKARADRIRQFKASICN*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0065	shell	direct	high	1223	0.999	GCA_003352345.1_01254
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1257893	1258156	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	46108	46371	GCA_003352345_1_1_1206	GCA_003352345_1_1_1206	+	1914782	.	.	hypothetical protein	MNSVEGFYKVQNLTTVKGLYKVQILTSVRGLHSEQKLTTVLGLHSEQKLTTVLGLHSEQKLTTVLGLHSEQKLTTVQGLDKVQILTK*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0066	shell	direct	high	263	0.996	GCA_003352345.1_01255
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1258173	1258928	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	46388	47143	GCA_003352345_1_1_1207	GCA_003352345_1_1_1207	+	1914782	.	TIGR03761	integrating conjugative element protein, PFL_4669 family. Members of this protein family, such as PFL4669, are found in integrating conjugative elements (ICE) of the PFGI-1 class as in Pseudomonas fluorescens.	MTTTYNQQLGPLRSEITFTLHTQYATRLWNGRDLVKNEAGEVVTSSILSIPNALSLLSQIQQAAEQDDPYADDYLLRFEQKVLGFRKEMQDMTWRMVNLYSEKIPENFQIERCANIAPIQYPIFVNTQLGYQLLYLLADFDSLARTVMTASHIALLTKDDAYDWLESGAKLIRRAFGVLENYRNSGITRQDALENNARYQAAVKRMKYTLTPDVLSGTTRATFAPTIKKSSLAESDDNGSVEVQITANKTE*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0067	shell	direct	high	755	0.999	GCA_003352345.1_01256
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1258943	1259416	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	47158	47631	GCA_003352345_1_1_1208	GCA_003352345_1_1_1208	+	1914782	.	pfam11358	Protein of unknown function (DUF3158). Some members in this family of proteins are annotated as integrase regulator R however this cannot be confirmed. This family of proteins with unknown function appear to be restricted to Proteobacteria.	MDNVLIPSDMYKQLGRTTPLNDSLKQLFSELDSVQQYELLAESLATVREALMLQQNEMLQNVRKSELSVLPIHMIRDKASSSGGTFLRWRSFQASKTGDAVLNPVFNNPQLSSDLRQKLVSAEKERILINLQVSVLNFMMRQVSSAVDKIKEIEDHL*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0068	shell	direct	high	473	0.998	GCA_003352345.1_01257
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1259662	1260084	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	47877	48299	GCA_003352345_1_1_1209	GCA_003352345_1_1_1209	+	1914782	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MAGINKVIIVGHLGNDPEMRSMPNGEAVANISVATSEAWTDKNTGERREVTEWHRIVFYRKLAEICGQYLKKGAQVYIEGRLRTRKWQDQNGQDRYTTEIQGDVMQMLGTRPQSADGANNSQPMPQQDASANAFDDSIPF*	common_virus_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0069	persistent	direct	high	422	0.998	GCA_003352345.1_01258
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1260111	1260629	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	48326	48844	GCA_003352345_1_1_1210	GCA_003352345_1_1_1210	+	1914782	.	PFAM:PF17061.4	Rz-like-spanin	MKKIIFVLSAVAALSGCAELNSLNDAVGNVAGQLSSVLGGGNSSSSSSGVAYTQSSRSHRYNVEDSITSSKNIDSLYVKIKRNLKFKTREEALSGLSGYERQRYESLLDEEGHAHEATPGVYYHMANSYVGGRKIDITLAKEDGKVRISWIASSNESDFAQFVKSEVIKAIK*	phrogs_hmm	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0070	shell	direct	high	518	0.998	GCA_003352345.1_01259
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1260845	1261402	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	49060	49617	GCA_003352345_1_1_1211	GCA_003352345_1_1_1211	-	1914782	.	cd16389	fertility inhibition factors, including OSA and FiwA, related to the ParB/Srx superfamily. Osa and FiwA are fertility inhibition factors (FIN), which are employed by plasmids to block import of rival plasmids. Osa (oncogenic suppressive activity) of IncW group plasmid pSa gene inhibits the oncogenic properties of Agrobacterium tumefaciens. Osa is structurally similar to the ParB N-terminal domain/Srx superfamily of proteins: ParB acts in the bacterial and plasmid parABS partitioning systems. Osa has been shown to have ATPase and DNAse activities, an can block T-DNA transfer into plants. FiwA is encoded by plasmid RP1 and blocks the transfer of plasmid R388. The gene product of Haemophilus influenzae p1056.10c also blocks T-DNA transfer.	MIKLTPSSIGVMVDTLRYSGRDRYIIFRMKTREQKVVYMRYPQHIENMANQENMIVIVDAQKFLSLWQRSPYEVDKNTCAGDESTWRKDYKFHHAENGFAKSMDSPVPLADVNVHIKDGEISCSLNDGMTRTLWLLANGVKEFPILVRNHKEKAKILSKYASPLSSLHFEPLNLFFAITGEKYPL*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0071	shell	direct	high	557	0.998	GCA_003352345.1_01260
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1261493	1263538	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	49708	51753	GCA_003352345_1_1_1212	GCA_003352345_1_1_1212	+	1914782	.	PDB:5D5H_A	DNA-topoisomerase-1	MKLFLCEKPSQGNDIAKVLGATKRGEGCLSTPDGQLTVTWGIGHLVEQFNPEEYDPAFKKWAFETLPIIPGKWGLSPKKETKKQFNVVMKLIKQAKLVVIATDIDREGETIARELLDLAGFRGQIKRLWLSALDDTSIRKALGALKNNEETLPLYYAGLARSRADWLIGMNFSRLYTLLAQQQGYQGKPLSVGRVQTPTLSLVVNRDREIKNFIPKQHFALQVMLSDGNQHFATQYVIPEQYCDPDGLCLSAQVIQAANQQIRQFGQAKVESVETKRERQNAPLCFALSDLQSEANRLYGLGAQRVLDIAQSLYETHKATTYPRTDCGYLPESQFAEAPQIIQCLLQSDNRLHPLAGMLNLNQKSRVWNDKKITAHHGIIPTMIKADISKMSDEELKLYDLIRRRYLAQFLPVSETDKTQIILKCGQHILSARGNVLIAPGWKILFGKSLDEDDDAPQALPTLKQGQICQISDSEIKTLQTSPPNHFTEGTLLTAMKNAARFVTDERLKQRLRETEGLGTEATRAGTIQGLIDKGFLKKKGKSLLATDEAMTLIDNLPQMLKDPGLTALWEQALNQIAERTLSLEVFMQKQEVFVRHLMADCLKKGMSLGNIEIRKCPKCGAPMIKRNGKNGAFFGCSAYPNCQHIENIDSKKNTKSTKNLKKKSSKSVSEQISSLRSLLN*	common_virus_hmm	common_virus	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0072	shell	direct	high	2045	1.0	GCA_003352345.1_01261
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1264423	1264851	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	52638	53066	GCA_003352345_1_1_1213	GCA_003352345_1_1_1213	+	1914782	.	PF12101.8	Protein of unknown function (DUF3577)	MSTQNAQPKYFNLHTSGIGYLSDIREIKPKKGDAFWACRIAALTGSSDSPEYRFFDMNVSGEETVNLIKRCQEAVEAKKKVLVSFVMSDLWYDTFTYSKDSEYHKKGDTGVSIKGRLYRINFIKVDGELKYQAKRQDEQGND*	hhsuite_tools	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0073	shell	direct	high	428	0.998	GCA_003352345.1_01262
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1264966	1265607	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	53181	53822	GCA_003352345_1_1_1214	GCA_003352345_1_1_1214	+	1914782	.	PF12083.8	Domain of unknown function (DUF3560)	MNTYAKFCPNVFVAKCPDAHQKGDVIILTSKYGKETEVEIHNLVKTSEDAYFYSFTRCDGVNSQVRAEQKAERYQNAANNALKRSEQYCEAANEGREFLSLGEPIKIGHHSEKRHRALIERNARRMDKSIEEMRKAESYDGKIAYWEQMAGKIDLSMPESLEFFKFELEKAKEKHQELKDKPELRTHAFSLTYAKKAVNELEKKVKLAELLWA*	hhsuite_tools	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0074	shell	direct	high	641	0.998	GCA_003352345.1_01263
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1265642	1266049	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	53857	54264	GCA_003352345_1_1_1215	GCA_003352345_1_1_1215	+	1914782	.	.	hypothetical protein	MFYYVNSGLELITLTTQEFISEFLGKATTPKGIEPNHFYDPQTKLVYAWYSGKCVATSEYQYTPQEAEALLVELALENASNNGDGSIMFQPSPTKEALIADMSNYLEYCIDDESEHDLEFAAKIKQIIDSLKTSD*	.	hypothetical_protein	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0075	shell	direct	high	407	0.998	GCA_003352345.1_01264
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	CDS	1266150	1266620	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	54365	54835	GCA_003352345_1_1_1216	GCA_003352345_1_1_1216	+	1914782	.	PRK00024	DNA repair protein RadC. 	MFKLNEQQQAILEQAQVILTKVMEEKPFYQGAQEFTEPSIAKLYFQTIIGNEERENFVVLFLDRIHRLIKSEVMFQGSVSETSVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADKYITKRLKEACELMDIKLLDHFIVSGSASFCFTDNHLI*	mmseqs_cdd	nonviral_gene	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_CDS_0076	shell	direct	high	470	0.998	GCA_003352345.1_01265
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1427769	1428746	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	1	978	GCA_003352345_1_1_1383	GCA_003352345_1_1_1383	+	1914782	.	COG2189	Adenine specific DNA methylase Mod  [Replication, recombination and repair]. 	MKANIQTELTQALLSHEKVWANEEKTILAKNILLDLVEKTDPTIIGLLLSNDELKRHFFVEVNGVLVFKLQDFRFFLDKHSVNNSYTKYANRIGLTDGNRFLKDSSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRNNDQSDSQLYTKLTRKRQEIFFNQTLAFDEIDRLFDAKAFSKFSRHTADGKQAVGKIKHRSDGTPAENLIIKGNNLIALHSLAKQFKGKIKLIYIDPPYNTENDSFKYNDKFSHSTWLTFMKNRLEIAKTLLADDGVIFIQCDNNEYSYLNVLLNDIYSRNNHMNTIIWKKVKSAKKQSSFLSNVVEYIY*	mmseqs_cdd	nonviral_gene	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0001	shell	direct	high	977	0.999	GCA_003352345.1_01433
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1428759	1428920	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	991	1152	GCA_003352345_1_1_1384	GCA_003352345_1_1_1384	+	1914782	.	.	hypothetical protein	MVNQKLTNFSLKRLKRQILKITHILKKIQIEGMVRLTLLKKVKVRQDILMVNY*	.	hypothetical_protein	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0002	.	unmatched_CDS	none	0	0	.
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1428889	1429191	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	1121	1423	GCA_003352345_1_1_1385	GCA_003352345_1_1_1385	-	1914782	.	.	hypothetical protein	MSDSLVVSSIIRLISASGFCPSKSSTLWASLAEIIWTSSSFHKSDNGLPSLSSRYRLTLGVPFFVKIILPALIPLSISSCPQIQCFPFGGSSNLPLKYLA*	.	hypothetical_protein	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0003	.	unmatched_CDS	none	0	0	.
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1429244	1429720	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	1476	1952	GCA_003352345_1_1_1386	GCA_003352345_1_1_1386	+	1914782	.	PFAM:PF01555.17	DNA-methyltransferase	MNRQYIGIEQMDYIETLAVERMKKVIDGEQGGISKAVNWQGGGEFVYAELAPFNETAKQQILACEDSDGIKTLFEGLCERYFLKYNVSINEFSQIIEEPEFQSLALDEQKQMVLEMLDLNQIYVSLSEMDDEQFAGCLNDDDKALSRAFYQAEKKDGE*	phrogs_hmm	hypothetical_protein	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0004	shell	direct	high	476	0.998	GCA_003352345.1_01434
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1429710	1432484	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	1942	4716	GCA_003352345_1_1_1387	GCA_003352345_1_1_1387	+	1914782	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MANDKTLFDWVEDRKSMLEEMEQTDFFALPEFVSNNLKYPFFEWQKSALENFVIFDRTSKLKDFPGIKNRPTHLLFNMATGAGKTMMMAALILYYFEKGYRHFLFFVNQNNIVDKTENNFIDPAHAKFLFTEKILQGDTVIPIRKVETFSPHSDGIEIKFTSIQKLYNDIHTERENQTTLADLHKLNLVMLGDEAHHLNAQTKGKKQDELDLEKEMNDRTSNAEIERKGWEHMVLELLLNKNGNPSQNVLLEFTATLPENADVQQKYADKIITKFGLKEFLQKGYTKEINLVSSTLGKKERVLHALLFAWYRHQIALKYGIANFKPVMLFRSKTIDESKADYLAFLNWVEKVQAVDFSFLTTFSTSLNDGDNANEQGKTRTEQALKFMQENGFEFAHLANWVKQNYQKHNVIITNSETNKKKTEKTDSETEKLLNNLEAADNPIRAIFTVDRLTEGWDVLNLFDIVRLYEGQNGGGSNKKSGKTAAATVSEKQLIGRGVRYFPFAFEGKQPNKRKFDNDMQHELRILEELFYYTHDEQSRYISELKNELRKDGYLPEKDDDKVLATFKLKSEFADNKDFRELLIWANKKIPNPNAKSNNADSLQANPQTLSFQVHDNQLLQETQFTADENDETARQIGTQNNFTQTIKMSEMERHIFNKALHIKGKNSQSLFHFDRLQSKLNIQNRNELQNKLLKDWQIEFLGLGQDKQVLPDDKLAGCLKILEMVEKHLNESDKPFIGTKEFTPKKLWEIFGTPKQKWVKKDDVKTTIATQNDWYVMDNFAGTSLEEGLIQFISERLGDLKSKYDVHLIRNEEVFKLNNFADGEGFMPDFVLLLKDKQKSSSDSVDGFLHYQIFIEPKGGHLVETDRWKEEFLEAITAEYGKDKILQKDTPHYRLIGLPFFTDHQKNGQFTESFPLGETLLEK*	common_virus_hmm	common_virus	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0005	persistent	direct	high	2774	1.0	GCA_003352345.1_01435
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1432583	1432924	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	4815	5156	GCA_003352345_1_1_1388	GCA_003352345_1_1_1388	-	1914782	.	pfam02627	Carboxymuconolactone decarboxylase family. Carboxymuconolactone decarboxylase (CMD) EC:4.1.1.44 is involved in protocatechuate catabolism. In some bacteria a gene fusion event leads to expression of CMD with a hydrolase involved in the same pathway. In these bifunctional proteins CMD represents the C-terminal domain, pfam00561 represents the N-terminal domain.	MFADWKEHTSHVKKSFGALGKQHPKMLQAYQALGAAAAEGNVLDAKTRELIALAVAVTTRCESCISVHAEEAVKAGASEAEVAAALATAIALNAGAAYTYSLRALEAYSVQKA*	mmseqs_cdd	nonviral_gene	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0006	persistent	direct	high	341	0.997	GCA_003352345.1_01436
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1433036	1433932	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	5268	6164	GCA_003352345_1_1_1389	GCA_003352345_1_1_1389	+	1914782	.	cd06995	"AraC/XylS family transcriptional regulators similar to Escherichia coli YkgD, N-terminal cupin domain. This family contains mostly bacterial proteins containing an AraC/XylS family helix-turn-helix (HTH) DNA-binding domain C-terminal to a cupin domain, and may be possible transcriptional regulators. Included in this family is YkgD, an uncharacterized Escherichia coli protein thought to be a transcriptional regulator. Proteins in this family belong to the cupin superfamily with a conserved ""jelly roll-like"" beta-barrel fold capable of homodimerization."	MDYLDKLTHLAQVRGEINIRCEFQGEWQISHQEKDAGKGIFHLIEQGECWLTLNEKQFHLKEGDIFFLPQNQPHFMHYSVNKRADIPTKKSHQGLFELHQIGRGTPDLKMFCGNFYYQQDALLTASIPEYLHINLCDTPIHPLVQLFLQEAQKNDAGTKSVVDALSNVLLIYILRHAIQQNLIEQGILFALQDKRLNTALIAILQQPQNDWHIEQLAELATMSRANFIRIFQQQLGMSPGRFLTKVRLQSAAFLLKQSQQSVLAIALEVGYQSEAHFCKVFKNYYQLSPSQYRKSVSL*	mmseqs_cdd	nonviral_gene	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0007	persistent	direct	high	896	0.999	GCA_003352345.1_01437
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1434011	1435855	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	6243	8087	GCA_003352345_1_1_1390	GCA_003352345_1_1_1390	+	1914782	.	COG1132	ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]. 	MFNKIFSWFENRLNPYPESNPTTPKKGLFRFIWSSIAGMKGWILLLAILTVGTGVMEAVLFQFMGTLVDWLGTFTPEKLWQEKGHLLIGMAALLLISIVWGFLASTVRLQTLQGVFPMRLRWNFHRLMLGQSLSFYQDEFAGRVSAKVMQTALAVRDTVLTLADMFVYVLVYFITSGVVLVALDSWFLLPFITWIILFGLILRTLIPKLSKTAQRQADARSLMTGRITDAYSNIATVKLFSHGSREATYAKRSMQDFMVTVHAQMRLATSLDTLTYATNILLTLSTAILGIILWKNGQVGVGAIATATAMALRVNGLSRWIMWESARLFENIGTVNDGMNTLTKPHTIVDKPQASPLQVKQGEIKFNDITFAYDPTKPLLNHFNLTIKPGEKVGLIGRSGAGKSTIVNLLLRFYEAQQGEITIDGQNVLNVQQESLRRQIGLVTQDTSLLHRSVRDNIIYGRPNATDEEMVLAAERAEAADFIPFLSDAQGRKGYDAHVGERGVKLSGGQRQRIAIARVMLKDAPILLLDEATSALDSEVEVAIQESLDKMMENKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHAELLELNGLYAKLWNHQSGGFLSGSAE*	mmseqs_cdd	nonviral_gene	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0008	persistent	direct	high	1844	0.999	GCA_003352345.1_01438
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1436402	1436689	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	8634	8921	GCA_003352345_1_1_1391	GCA_003352345_1_1_1391	+	1914782	.	PDB:4BIL_D	Large-Terminase	MKNKELLAELKAYSDSLRQKVEAKFEEWDDSLAAISERRKKVLDPVSGYDFFVSNYFPHYVRSRSRSQLHNYLFEQLTSITTAIISAFSHCCTTW*	hallmark_hmm	common_virus	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0009	shell	direct	high	287	0.997	GCA_003352345.1_01439
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1436658	1438043	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	8890	10275	GCA_003352345_1_1_1392	GCA_003352345_1_1_1392	+	1914782	.	PDB:4BIL_D	Large-Terminase	MHLAIAAPRGEAKSTLVSQLFTLYCLVTQKKRYALIVMDSIDQAYPMLEAIKVELEFNQRLRIDFPEMAGQGRVWQAATIITKANQKVQVAGSGKKLRGLRHGAYRPDLVVLDDIENDEQVRSPEQRDKLHDWLKKTVLPLGAAGDKLDVVYIGTILHYDSVLNRTLSSKAWKTAKFKALIRQPDDMSLWDKWEDFYLNEGEAVADAFYTQNQAAMDKGAVVSWAARPILTLMKIRARDGHATFDSEYQNDPLSSDDAIFANAIKYWTELPSDLIYFGAVDPSLGKAGASRDPSAILVGGYQRATGKLYVVEAQVKKRLPDLIIEDVIRFQQQYKCHRWFVETVQFQEFLKDELVKRSAQRGAPVPATAIKPNTDKMLRIESLQPHMVNGLILLHSTQATLIAQLRHFPKADHDDGPDALEMLWKNSITNAAPIEWIGLNDENLGHDDFEAEDDLYSIWRG*	hallmark_hmm	common_virus	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0010	shell	direct	high	1385	0.999	GCA_003352345.1_01440
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1438047	1439492	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	10279	11724	GCA_003352345_1_1_1393	GCA_003352345_1_1_1393	+	1914782	.	PDB:5NGD_C	Portal-protein	MKIWEKIKTLVGSKTEPIQTDEAMVTANGRILSDHPSNRITPSKLKSILEDAENGDITAQHELFMDIEEQDSAIGANIQTRKRAILTLDWRIAEPRNATPAEEKLQTEIDELFYQYPNLENLLMDMMDAVGHGFSALEIEWKLENGKYIPHNFIPRPQSWFKLDKNDNLLLKTPTNPMGEPLRQFGWVVHSHKSRSVQLARMGLFRTLAWLYMFKHYSVRDFAEFLELYGMPIRIGKYGAGATNEEKRTLLRALAQIGHNAAGIMPDSMKIELHNAANTGAGSANNPFLQMVDWCEKSIARLILGQTLTSGADGKSSTNALGNVHNEVRRDLLVSDAKQVAQTITQQIILPYLQINVDPNIALHRVPYFEFDTKKYDDLSTFADAIPKLVGIGVQIPEKWTRDKLGIPEAQDGEVVLKAVQSDFNPDLKTPGKSTALSAHVVGCQCAGCLGKGARVALSAGNNGETEQDLLDNSLRGVKCD*	hallmark_hmm	common_virus	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0011	shell	direct	high	1445	0.999	GCA_003352345.1_01441
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1439485	1439682	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	11717	11914	GCA_003352345_1_1_1394	GCA_003352345_1_1_1394	+	1914782	.	PF06074.12	Protein of unknown function (DUF935)	MINFNRQLDPVVRQLAVVLTACNTYEEASDKLAEIYPDLDNAEHQRYLTQAVFLSELLGVSNAKR*	hhsuite_tools	hypothetical_protein	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0012	cloud	direct	high	197	0.995	GCA_003352345.1_01442
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1439669	1440946	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	11901	13178	GCA_003352345_1_1_1395	GCA_003352345_1_1_1395	+	1914782	.	PFAM:PF04233.13	minor-capsid-component	MPSVNFVLGLEPKKAIEFLRDKKAILGHFDEDALMDSARAKATRIANLSSLEMSKDIYQSLVDAQTQGLPFSEWKKGIFEHFKKKGWIAGYDKEYLLADPKTGEYFGSPRRLETIYRTNMQSAYSSQRYAEMRDNADNRPYWQYSAVNDDRTRPSHSAMHGLVYRYDDPFWATFYPPNGFNCRCSVIALAERDIKRRNLVVGDSADRLIDYDRKINSTTTEKTTAFKLSDDKWITTDRGFDYNVGRTVYKPNLALYPESLAHQFAKREMGGEGFKFDFKQFEKEFSPYVDDYKKLKGKNEREAFLNPIRERFKMDYKFIAGVLNEDTKQQIKTDLSTVWLSDDSLIKQIANRYGQDFDFDDYARLPDVLYSPDKIEQDGKNTFKFYKEVDSRRLIAVIKVLNGSNEIYLTSQHLASDRQWRKAFK*	hallmark_hmm	common_virus	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0013	shell	direct	high	1277	0.999	GCA_003352345.1_01443
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1441057	1441542	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	13289	13774	GCA_003352345_1_1_1396	GCA_003352345_1_1_1396	+	1914782	.	PFAM:PF05069.12	Virion-morphogenesis-family	MIDVKINNEKELIHALSQLAQHVKYNVPLMRTIAGTMQSAVDQNFEAGGRPAWLGVKSRPDGKPLIDSSALRNSIHSSWDNNEAQVGTNLKYAAIHQFGGKTSPHKIKPVTKKALVFGGIVRKSVDHPGSDIPARPFLVLTPQDEDDILEDVQAYFRSVVK*	hallmark_hmm	common_virus	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0014	shell	direct	high	485	0.998	GCA_003352345.1_01444
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1441786	1442835	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	14018	15067	GCA_003352345_1_1_1397	GCA_003352345_1_1_1397	+	1914782	.	pfam10123	Mu-like prophage I protein. Members of this family of proteins comprise various viral Mu-like prophage I proteins.	MHIKPIALSFALNKKTNGRIQLFPFGRFYSQDGRTEGAGGWYVDDTNGYTLAEDINQLKIKLMIDYEHQTLFIEKNGKPNPAAGWMETVEYISGEGIFVDVDWTKKAHQQIRDGEYRYISPLFLAEPDGKVTKVLNAALTNRPACHDLAEAVAFSSQFNQHQHKKDNPMLELLRQLFGTPDATEYEMKQKLTALSAAKGDSPVALSDVYGKLKEKDGEVVALTAKVGAEPDPSKYVPLSSMKDVQDKLNALSAQVHGDKVNDLIQTALSDGRLLPSQKEWAEKLGKSDITALSDYLTVATPNQALAGGHQAKEDPNKDKQVALSAAEQAAARALGMTEAEFIKEHKEQK*	mmseqs_cdd	common_virus	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0015	shell	direct	high	1049	0.999	GCA_003352345.1_01445
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1442835	1443776	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	15067	16008	GCA_003352345_1_1_1398	GCA_003352345_1_1_1398	+	1914782	.	PFAM:PF10124.8	Major-Capsid-protein	MFKKSEVLKAIETQFKKDFAAGLGLIKPQWDLIAMKVSSNTKVNTYGFLGQFPKMVEWVNKRQRKVMQAQGTSIENKLYESTVGIARTDIEDDQVGLFRPMVQQAAQSAAELPDDLVFGLLKAGKTTLCYDGQNYFDTDHPVFDNVDGTGSSKEQRAKSKEQSNITTGTKTEAPMFYIFDTTNAIKPLIWQERTAPEIETKFAPSKSDTVFNEDIYEWGVRARGAAGFGFWQLAHCVEKTELTAENIMDVIAKMQSLKGDGGKLLNIRPNVILVPPALEFKARQICEGELINGTTNILKGRLKVIVSPQIIAE*	hallmark_hmm	common_virus	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0016	shell	direct	high	941	0.999	GCA_003352345.1_01446
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1443816	1444121	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	16048	16353	GCA_003352345_1_1_1399	GCA_003352345_1_1_1399	+	1914782	.	PF17891.1	Mu-like prophage FluMu N-terminal domain	MAKKQQNKTDDEVKTDSAENTTETDRTLDELDDTPKGSDVIHPIAYAVTLRAIHPQASYGRCGYRFNKESAVEIPVENLTGEQVIMLAEDPWLELIPICDK*	hhsuite_tools	hypothetical_protein	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0017	shell	direct	high	305	0.997	GCA_003352345.1_01447
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1444201	1444494	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	16433	16726	GCA_003352345_1_1_1400	GCA_003352345_1_1_1400	+	1914782	.	PFAM:PF08873.10	portal-protein	MRTLFNNATFKGGAITAYAIEYDAIYDDLSPLEDGRYPEMTQDSKNPDYLFTHYHGELSPPEPMLERIGNNIYDPISGAKVPFEVETQNESESSNRH*	phrogs_hmm	nonviral_gene	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0018	shell	direct	high	293	0.997	GCA_003352345.1_01448
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1444466	1444648	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	16698	16880	GCA_003352345_1_1_1401	GCA_003352345_1_1_1401	+	1914782	.	pfam10948	Protein of unknown function (DUF2635). This is a family of phage proteins with unknown function.	MKVKAAIGIKVPMEHQPYTYIEQVPVEVEPSIYYQRRINDGDLIVITETRSRKEKEKDNG*	mmseqs_cdd	nonviral_gene	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0019	shell	direct	high	182	0.995	GCA_003352345.1_01449
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1444641	1446056	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	16873	18288	GCA_003352345_1_1_1402	GCA_003352345_1_1_1402	+	1914782	.	PDB:5LI4_E	tail-component	MAEMNIDFDNIPTSLRKPGVYTEYNSRNAVSTLPTNEQNVLIVAPMLNATKAFSAPTPIYSDVDAKNTFGAGSWTHLMARIAIQNNTMIRLTVIGLKESDSGVAATGTITLTGTASNAGVLKVIIGGLDYAVAIAKSETAANIAARLNAVINAGEYCPVSATVNEGTVTLTAKCKGEIGNEISVNATLSVNDMAVNVSALANGAENADLVAALASVAGQHYHVIISPFADDKNAKALREHLESVASPVEKKPGVGVLGFNGTLASGTTYTEKINANRITVGWYKGAVESNALIAAGYGAVIAGEEDPAKPLNTLEIKGLTPVDATQTPLKTEVNQALFHGLTPITVVNNRVQIMRAITTYTKSPANVDDPAWLDLTTIRTLDYTRKAIEQRIELRFPRAKLSNRTPPKVRSEILDVLYRLEQQEILENVDANKGKLLVVRNGKDPNRLDTAIPADVVNGLHVVANRIDLIL*	hallmark_hmm	common_virus	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0020	shell	direct	high	1415	0.999	GCA_003352345.1_01450
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1446066	1446437	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	18298	18669	GCA_003352345_1_1_1403	GCA_003352345_1_1_1403	+	1914782	.	PFAM:PF10618.8	tail-tube-protein	MEKYAGTAVLEVNGVEFEITDLNVTKQTGRKLVKTMNSEGRARGFAKGITTWELSVTAALPIDGSEIDWAGISDAKITVYPLNQEDKRTSYLGCFTTQVGEKYTVDNEAVIDIQMNALKEVKE*	phrogs_hmm	hypothetical_protein	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0021	shell	direct	high	371	0.997	GCA_003352345.1_01451
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1446437	1446778	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	18669	19010	GCA_003352345_1_1_1404	GCA_003352345_1_1_1404	+	1914782	.	PFAM:PF06528.11	tail-assembly-chaperone	MRLLLGISYEDKRYFDFDVRLLTLGGECAALEKVAELGLDEKENLTKAEQMLVDLAYLSEQLDIIGIAQDKLTPQFLLDNLATDDYVLITQAIAELRKKHIDAGENPSKAETE*	phrogs_hmm	hypothetical_protein	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0022	shell	direct	high	341	0.997	GCA_003352345.1_01452
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1446793	1446999	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	19025	19231	GCA_003352345_1_1_1405	GCA_003352345_1_1_1405	+	1914782	.	.	hypothetical protein	MFDAEKNYRSAVILLAKFGFTAEEVRAMCHAEVAAWVASWQYSQGIKTQSEKGNTVHYNLMRRKTKGA*	.	hypothetical_protein	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0023	.	unmatched_CDS	none	0	0	.
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1447046	1447201	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	19278	19433	GCA_003352345_1_1_1406	GCA_003352345_1_1_1406	+	1914782	.	.	hypothetical protein	MAELNLALTLKARDQASRVFQRAQSQIKQSTKAMASARETLGVRSEHKIQQ*	.	hypothetical_protein	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0024	shell	direct	high	155	0.994	GCA_003352345.1_01453
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1447319	1449184	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	19551	21416	GCA_003352345_1_1_1407	GCA_003352345_1_1_1407	+	1914782	.	PFAM:PF10145.8	minor-tail-protein	MGKTTWGQRLGNVGRNIAGATVGVAAGAAVAVPKIRKAADYDLEVAKIANTAYSGASIEEKTKGKEKIHGAIKASLNYGGTKEDALGAVGRLIGEGNVSVEDALKLLPTIQMNATATGASTDDIAALVNSLLNFGIKADDIQQALDYASASGKAGGFELKDMARYAPEFLSAAGNAGLGGLEDLKQVFKGAQQVYKVSGGTGQSSTNLVNFFSKLRSSDTAKKFEKLEVYDPKTKKTHGIDFEKSMTNEMKTGKNAIEAFMSIIDQVLASDRTYQKLLKKLNNAKDDKEAQAIAEHIAKYVETTKLAEVMPDIQAGTAMFAMRRDKNTAQNVDEQYAIAEKGDFNKEDFDFMRQQNSVRFQIAKNKQEMNSIENWNGANDRLGNAADWLSENIEEFPNLTKAVVGATDALQIFSAGLAGFSLVDLLTGGKMGGGALGKVTQGAATTSAIANGAGKLLNIGGKAATATGAAMGVGGLMIAGEERTTEEAKAEEKAEAKTAQEKQLENQFYPNAYGGNKPTTTHYAPQGFGYNKNSVWGTASRSGEVAEIARKDEVAALRLERGTLTQAQYDERTRQSAVKIAEIRNQGKGYSGLSVAANDTDSALSRTLGDLSSLANYQADF*	hallmark_hmm	common_virus	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0025	shell	direct	high	1865	0.999	GCA_003352345.1_01454
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1449337	1450671	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	21569	22903	GCA_003352345_1_1_1408	GCA_003352345_1_1_1408	+	1914782	.	COG4228	Mu-like prophage DNA circulation protein  [Mobilome: prophages, transposons]. 	MGWTMPVQRASFRGVRFDVLSVDDDVYRSTIEHAYPFVNGADVEDLGLNPLTVRMQAVFYGTGYYTDFKKFLSVLQKSGAATLVHPIRGRLQNMICTGASFHHEAEMIDYVALDLTFIESTPAKPIFVFNYSLLAKIDALLTELENFVDDVMALYGEFMEIVAFAANTKSRLLGVYGALFGCFEQVRGLFDFDKTKYGVSPVVTQDNFKAKSSRAVRDLVTMIDSGLRQIASCKDLTLRAKFDEVLRTIRQIKHIPADLVSGKNIKSAKEQAALKSLTTSFSKDDTESVHLMMQLASSVALLRIATELVEDDDLLPQDIDYITTQVRSQIMDNLQLLRKQVDDEHRGENITVLSTPNTSFYTAAHNTAEQLRNKAHKFTQLALAAINRKPPLMVREVPFSGTVQQIAHAFYQDYKRADELLRLNPQIRYPNFIERGEWLNSYVK*	mmseqs_cdd	nonviral_gene	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0026	shell	direct	high	1334	0.999	GCA_003352345.1_01455
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1450661	1450912	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	22893	23144	GCA_003352345_1_1_1409	GCA_003352345_1_1_1409	+	1914782	.	PDB:1WRU_A	Tail-protein	MSNNYPYENDVTVEVDDKAHNSWKSYDIDSDFLIPADAFKFDLGVPSNSTVLPDFSGAEVKVRINGELVMTGIVDTTQHTYYE*	hallmark_hmm	common_virus	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0027	shell	direct	high	251	0.996	GCA_003352345.1_01456
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1450905	1451789	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	23137	24021	GCA_003352345_1_1_1410	GCA_003352345_1_1_1410	+	1914782	.	PDB:1WRU_A	Tail-protein	MSKTNRTYSLNGRDRASILVDCSAPITNVKGLTVLDSVKKIVEPLGIKKVALRAENNPTLDKVDIDVGETAWNAAMRCANSAGLHLWFEPNGELIVGGADYSTPPVATLCCMKDGKRNNFEQADLTFDVSNRFSEVTFLAQSHGKQGQDNKNDLKWVYHDPEMTTYKPKTVVVSDVDNLEALQKWAKKYIADSVLEGFTLTIVVPDHKMQDGTLWQPGQRVHVICEEYDIDAIFFLMGRRFTLSRNGGTQTELRFKQDGIWTPDSYSAKAEKARKRKGKKLIATNGHGSWVDAN*	hallmark_hmm	common_virus	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0028	shell	direct	high	884	0.999	GCA_003352345.1_01457
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1451799	1452434	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	24031	24666	GCA_003352345_1_1_1411	GCA_003352345_1_1_1411	+	1914782	.	CDD:TIGR01644	phage-baseplate-assembly-protein-V	MRRLSQAIQQKAQGAVDEIRQAFRGVLHLVKSADNIQKVQASGLADETLQDVELMQQFGFTSVPPTNTQAVILPIGGQTTHGIVIATESGSFRVKNLQGGEVAVYDESGSSIVLKKGRLIEIDCDVLKINAATKVDISSPLVETDQVFTAQGQINGNGGMAVQGGSDAIFTGDVQQRGGSFTTDGDVTAGAISLRNHKHTGDSGGKTTKPE*	common_virus_hmm	common_virus	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0029	shell	direct	high	635	0.998	GCA_003352345.1_01458
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1452504	1452854	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	24736	25086	GCA_003352345_1_1_1412	GCA_003352345_1_1_1412	+	1914782	.	COG4381	Mu-like prophage protein gp46  [Mobilome: prophages, transposons]. 	MDREISPFTGDYTSKQISTLANAAYIRLTTPLGSWWADGRVGSLLHLIPREKDLSRIGLIAQQYAEEALQPLIDDGRADEIIVNHTQPHNGVLMLDISIRDNRGETYHFKHPVKVI*	mmseqs_cdd	nonviral_gene	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0030	shell	direct	high	350	0.997	GCA_003352345.1_01459
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1452869	1453159	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	25101	25391	GCA_003352345_1_1_1413	GCA_003352345_1_1_1413	+	1914782	.	PFAM:PF04865.13	Baseplate-J-like-protein	MFIVPSLEDIRQAILRDVQSLEPSADVSIDSDYYARASSLAAVAEGIYAHQKWIIKPFFPDTADTDFLEKHAGLRGIRRRNATYASGRGATVTGTP*	hallmark_hmm	common_virus	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0031	shell	direct	high	290	0.997	GCA_003352345.1_01460
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1453164	1453934	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	25396	26166	GCA_003352345_1_1_1414	GCA_003352345_1_1_1414	+	1914782	.	PFAM:PF04865.13	Baseplate-J-like-protein	MIKAGLQIKTDDNRFYETTESVVISASGSAVVAVRSLATGASQNIKTATKANFMAAPLGVQSDVVLNDVIGATDAESDASLLERLLEIIRRPPAGGNRYDYRTWALSVDGVDAAYVYPLRRGLGTVDIAITSNNDVPSDETIRRCQEYIDDVRPVTARESKVVKPDVTKVNFNIQVKISGVTLPEIKAAISTALADYFNTLIPGDDLIVSQCEAVVNNLVGVVDRKFTAPITNLKADVRTKIEWFRLGQITVTEMA*	hallmark_hmm	common_virus	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0032	shell	direct	high	770	0.999	GCA_003352345.1_01461
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1453931	1454527	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	26163	26759	GCA_003352345_1_1_1415	GCA_003352345_1_1_1415	+	1914782	.	PFAM:PF10076.8	tail-protein	MMQTDHKKVLAKLYPPVSYDVNGERFLAQCEVDGNAFDRLQKSAVDLLQIIEPTTSNTMLSDWERLCGIKTDYSNNYQARVKRVIAKLNAIGGLSIPYFKRIAESIGYRIEIKEFSPLANDLPTTGDLVQFRNEERDNLIFMWRVSVLNGDDNIVYFRAGSSFAGNHLVEFGDPIIEEFFRDLKPAHTYCYFAYQTGS*	hallmark_hmm	common_virus	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0033	shell	direct	high	596	0.998	GCA_003352345.1_01462
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1454531	1456510	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	26763	28742	GCA_003352345_1_1_1416	GCA_003352345_1_1_1416	+	1914782	.	cd19958	knob domain of R1 and R2 pyocins and similar domains. The knob domain is present as a tandemly repeated structural domain in R-type pyocins, which are high-molecular weight bacteriocins produced by some strains of Pseudomonas aeruginosa to specifically kill other strains of the same species. R-type pyocins are structurally similar to simple contractile tails, such as those of phage P2 and Mu, and they punch a hole in the bacterial envelope to efficiently kill target cells. The second knob domain may contain regions responsible for determining the killing spectrum. Knob-like domains occur in host-recognition and binding proteins of, not only pyocins, but also phages, such as in phage K1F endosialidase (not represented by this model), where it may interact with sialic acid, the cell surface molecule that is recognized during infection.	MKSLMPQIDSNDGLFHNGNPATGEQGTRVTDTWLNNLQDRVRDVQAEVHYVLQKAGFKPVENKQTQLYEAIVKIIDDNRKTASLTQKGETKLYTGYDSQSEDLALTPKTGYQLKQLIDSNTRSLGNVIPNSKKSSVVNSNSNDTVATSAAVKTAYDKAVSAEENNLYQKIYVGKDNLQLDLTDRQQLINLFGYSYRINGHLSFTAHNNAQSNITGLPLTTKSPIAVTFYIIGGYSSVYCHYPLLGRSFFSRINFNNTALTYKWIELLTNTGEQTINNQLVLATRGWSKIKFSIDSGGVWRVEMNPNSETDPRFNFVYKMKDNTSRYCSFPVLRKNEVVAYQDWVNAQIADNFTRGKLTTQNLNDIKAYGIYAQEANRDATPERNYPTNFAGTLIVYPSAYNVMQKYINFRSGETYQRNVNIDLRTWSEWRRIDGLNSVSRSGDKMTGSLMIEGSAPGGFANGLMLKNKAGGQNTGVFVDFYQTDNIPRASMLMRDAGNNSTQIEFLNTPEGADWYRDSRQGVLTISSTGGLWSKSYGWLHDHFAKQDDIRNVWNELNNTYRKNRYRHQYYPHHYNSAEVFDIPMADNGVMRVIIMNVTINGYAKVNLPEAFNGSCVVQATDVGGGQKRVGANIQNGNVVEIHNSGQTDFQILAIGWYGW*	mmseqs_cdd	nonviral_gene	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0034	shell	direct	high	1979	0.999	GCA_003352345.1_01463
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1456504	1457022	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	28736	29254	GCA_003352345_1_1_1417	GCA_003352345_1_1_1417	+	1914782	.	PFAM:PF14301.5	tail-fiber-assembly-protein	MVKNMMLFNIETSMFAPDCLVTDNQNWIEVSDEEIDGISASITGGGAVWAENGKIKCSGKAPSRFHVFNMATKSFELSEEKQTALLAETQTRLIANIDEHAAKIYSTWTRFESEYRERQAAAEAFKAANYEGDCSRYISDFAQRARLDNKTAANLILTQAAGLEKLQVELAN*	phrogs_hmm	hypothetical_protein	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0035	shell	direct	high	518	0.998	GCA_003352345.1_01464
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1457132	1457440	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	29364	29672	GCA_003352345_1_1_1418	GCA_003352345_1_1_1418	+	1914782	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MAKVYLAMYKHKRDWRKEPFKAIADRITRFFTKGNYSHCEIAIERIEFGNGHHYEHATVYDCYSSSVQDGGVRCKQIDVSDNTKWDLIPHQRCHRGANQSLF*	phrogs_hmm	hypothetical_protein	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0036	cloud	direct	high	308	0.997	GCA_003352345.1_01465
GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote	cenote	CDS	1457799	1457918	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C95	30031	30150	GCA_003352345_1_1_1419	GCA_003352345_1_1_1419	+	1914782	.	COG4416	Mu-like prophage FluMu protein Com [Mobilome: prophages, transposons]. 	MQSIKAIRYTFCNKLLAKVGIVGYLEIKCPRCKTVNTTR*	mmseqs_cdd	nonviral_gene	C95	30150	1427769	1457919	GCA_003352345.1|CP031236.1@region_1427770_1457919@tool_cenote_CDS_0037	shell	direct	high	119	0.992	GCA_003352345.1_01466
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	tRNA	1251733	1251808	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	39948	40023	tRNA-Gly	tRNA-Gly	+	1914782	.	tRNAscan-SE score: 77.4	Gly	NA	tRNAscan-SE	.	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	tRNA	1251815	1251888	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	40030	40103	tRNA-Cys	tRNA-Cys	+	1914782	.	tRNAscan-SE score: 48.8	Cys	NA	tRNAscan-SE	.	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote	cenote	tRNA	1251916	1252002	GCA_003352345.1	CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345.1_CP031236.1	GCA_003352345.1|CP031236.1	GCA_003352345_1_1	GCA_003352345_1_1@C83	40131	40217	tRNA-Leu	tRNA-Leu	+	1914782	.	tRNAscan-SE score: 58.4	Leu	NA	tRNAscan-SE	.	C83	54835	1211786	1266621	GCA_003352345.1|CP031236.1@region_1211787_1266621@tool_cenote_tRNA_0003	.	.	.	.	.	.