core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	715228	716073	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	1	846	GCA_003352365_1_1_694	GCA_003352365_1_1_694	-	1887933	.	PFAM:PF00145.16	DNA-methyltransferase	MANQNTFKQAPLPFIGQKRMFLKHFETVLNKNIKGDGEGWTIIDTFDGSGLLSHAAKVIKTKAHVIYNDFDGYAERLAHIDDINKLRAELYSVVGNATQKNKRMTKDCKAECIRIIQNFKGYKDLNCLASWLLFSGQQVATLDDLFQHDFWHCIRQSDYPKADGYLDGVEIVRESFHTLLPKFADNPKALFVLDPPYLCTRQESYKQVTYFDLIDFLRLINITRPPYVFFSSTKSEFVRFIEYMVEDKVDNWQTFDNAQRIVVNASASYTGKYEDNIVYKF*	phrogs_hmm	hypothetical_protein	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0001	shell	direct	high	845	0.999	GCA_003352365.1_00717
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	716135	716254	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	908	1027	GCA_003352365_1_1_695	GCA_003352365_1_1_695	-	1887933	.	COG4416	Mu-like prophage FluMu protein Com [Mobilome: prophages, transposons]. 	MQSIKAIRYTFCNKLLAKVGIVGYLEIKCPRCKTVNTTR*	mmseqs_cdd	nonviral_gene	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0002	shell	direct	high	119	0.992	GCA_003352365.1_00718
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	716613	716921	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	1386	1694	GCA_003352365_1_1_696	GCA_003352365_1_1_696	-	1887933	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MAKVYLAMYKHKRDWRKEPFKAIADRITRFFTKGNYSHCEIAIERIEFGNGHHYEHATVYDCYSSSVQDGGVRCKQIDVSDNTKWDLIPHQRCHRGANQSLF*	phrogs_hmm	hypothetical_protein	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0003	cloud	direct	high	308	0.997	GCA_003352365.1_00719
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	716914	717549	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	1687	2322	GCA_003352365_1_1_697	GCA_003352365_1_1_697	-	1887933	.	PFAM:PF14301.5	tail-fiber-assembly-protein	MVKNMMLFNIETSMFAPDCLVTDNQNWIEVSDEEIDGISASITGGGAVWAENGKIKCSGKAPSRFHVFNMATKSFELSEEKQTALLAETQTRLIANIDEHAAKIYSTWTRFESEYRERQAAAEAFKAANYEGDCSRYISDFAQRARLDNKTAANLILTQAAGLEKLQVELANQRMRKYEVKAPNLTLEQLQSIHDDIIKQMDNLMEAYQNG*	phrogs_hmm	hypothetical_protein	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0004	shell	direct	high	635	0.998	GCA_003352365.1_00720
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	717543	719522	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	2316	4295	GCA_003352365_1_1_698	GCA_003352365_1_1_698	-	1887933	.	cd19958	knob domain of R1 and R2 pyocins and similar domains. The knob domain is present as a tandemly repeated structural domain in R-type pyocins, which are high-molecular weight bacteriocins produced by some strains of Pseudomonas aeruginosa to specifically kill other strains of the same species. R-type pyocins are structurally similar to simple contractile tails, such as those of phage P2 and Mu, and they punch a hole in the bacterial envelope to efficiently kill target cells. The second knob domain may contain regions responsible for determining the killing spectrum. Knob-like domains occur in host-recognition and binding proteins of, not only pyocins, but also phages, such as in phage K1F endosialidase (not represented by this model), where it may interact with sialic acid, the cell surface molecule that is recognized during infection.	MKSLMPQIDSNDGLFHNGNPATGEQGTRVTDTWLNNLQDRVRDVQAEVHYVLQKAGFKPVENKQTQLYEAIVKIIDDNRKTASLTQKGETKLYTGYDSQSEDLALTPKTGYQLKQLIDSNTRSLGNVIPNSKKSSVVNSNSNDTVATSAAVKTAYDKAVSAEENNLYQKIYVGKDNLQLDLTDRQQLINLFGYSYRINGHLSFTAHNNAQSNITGLPLTTKSPIAVTFYIIGGYSSVYCHYPLLGRSFFSRINFNNTALTYKWIELLTNTGEQTINNQLVLATRGWSKIKFSIDSGGVWRVEMNPNSETDPRFNFVYKMKDNTSRYCSFPVLRKNEVVAYQDWVNAQIADNFTRGKLTTQNLNDIKAYGIYAQEANRDATPERNYPTNFAGTLIVYPSAYNVMQKYINFRSGETYQRNVNIDLRTWSEWRRIDGLNSVSRSGDKMTGSLMIEGSAPGGFANGLMLKNKAGGQNTGVFVDFYQTDNIPRASMLMRDAGNNSTQIEFLNTPEGADWYRDSRQGVLTISSTGGLWSKSYGWLHDHFAKQDDIRNVWNELNNTYRKNRYRHQYYPHHYNSAEVFDIPMADNGVMRVIIMNVTINGYAKVNLPEAFNGSCVVQATDVGGGQKRVGANIQNGNVVEIHNSGQTDFQILAIGWYGW*	mmseqs_cdd	nonviral_gene	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0005	shell	direct	high	1979	0.999	GCA_003352365.1_00721
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	719526	720122	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	4299	4895	GCA_003352365_1_1_699	GCA_003352365_1_1_699	-	1887933	.	PFAM:PF10076.8	tail-protein	MMQTDHKKVLAKLYPPVSYDVNGERFLAQCEVDGNAFDRLQKSAVDLLQIIEPTTSNTMLSDWERLCGIKTDYSNNYQARVKRVIAKLNAIGGLSIPYFKRIAESIGYRIEIKEFSPLANDLPTTGDLVQFRNEERDNLIFMWRVSVLNGDDNIVYFRAGSSFAGNHLVEFGDPIIEEFFRDLKPAHTYCYFAYQTGS*	hallmark_hmm	common_virus	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0006	shell	direct	high	596	0.998	GCA_003352365.1_00722
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	720119	720889	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	4892	5662	GCA_003352365_1_1_700	GCA_003352365_1_1_700	-	1887933	.	PFAM:PF04865.13	Baseplate-J-like-protein	MIKAGLQIKTDDNRFYETTESVVISASGSAVVAVRSLATGASQNIKTATKANFMAAPLGVQSDVVLNDVIGATDAESDASLLERLLEIIRRPPAGGNRYDYRTWALSVDGVDAAYVYPLRRGLGTVDIAITSNNDVPSDETIRRCQEYIDDVRPVTARESKVVKPDVTKVNFNIQVKISGVTLPEIKAAISTALADYFNTLIPGDDLIVSQCEAVVNNLVGVVDRKFTAPITNLKADVRTKIEWFRLGQITVTEMA*	hallmark_hmm	common_virus	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0007	shell	direct	high	770	0.999	GCA_003352365.1_00723
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	720894	721184	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	5667	5957	GCA_003352365_1_1_701	GCA_003352365_1_1_701	-	1887933	.	PFAM:PF04865.13	Baseplate-J-like-protein	MFIVPSLEDIRQAILRDVQSLEPSADVSIDSDYYARASSLAAVAEGIYAHQKWIIKPFFPDTADTDFLEKHAGLRGIRRRNATYASGRGATVTGTP*	hallmark_hmm	common_virus	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0008	shell	direct	high	290	0.997	GCA_003352365.1_00724
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	721199	721549	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	5972	6322	GCA_003352365_1_1_702	GCA_003352365_1_1_702	-	1887933	.	COG4381	Mu-like prophage protein gp46  [Mobilome: prophages, transposons]. 	MDREISPFTGDYTSKQISTLANAAYIRLTTPLGSWWADGRVGSLLHLIPREKDLSRIGLIAQQYAEEALQPLIDDGRADEIIVNHTQPHNGVLMLDISIRDNRGETYHFKHPVKVI*	mmseqs_cdd	nonviral_gene	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0009	shell	direct	high	350	0.997	GCA_003352365.1_00725
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	721619	722254	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	6392	7027	GCA_003352365_1_1_703	GCA_003352365_1_1_703	-	1887933	.	CDD:TIGR01644	phage-baseplate-assembly-protein-V	MRRLSQAIQQKAQGAVDEIRQAFRGVLHLVKSADNIQKVQASGLADETLQDVELMQQFGFTSVPPTNTQAVILPIGGQTTHGIVIATENGSFRVKNLQGGEVAVYDESGSSIVLKKGRLIEIDCDVLKINAATKVDISSPLVETDQVFTAQGQINGNGGMAVQGGSDAIFTGDVQQRGGSFTTDGDVTAGAISLRNHKHTGDSGGKTTKPE*	common_virus_hmm	common_virus	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0010	shell	direct	high	635	0.998	GCA_003352365.1_00726
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	722264	723148	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	7037	7921	GCA_003352365_1_1_704	GCA_003352365_1_1_704	-	1887933	.	PDB:1WRU_A	Tail-protein	MSKTNRTYSLNGRDRASILVDCSAPITNVKGLTVLDSVKKIVEPLGIKKVALRAENNPTLDKVDIDVGETAWNAAMRCANSAGLHLWFEPNGELIVGGADYSTPPVATLCCMKDGKRNNFEQADLTFDVSNRFSEVTFLAQSHGKQGQDNKNDLKWVYHDPEMTTYKPKTVVVSDVDNLEALQKWAKKYIADSVLEGFTLTIVVPDHKMQDGTLWQPGQRVHVICEEYDIDAIFFLMGRRFTLSRNGGTQTELRFKQDGIWTPDSYSAKAEKARKRKGKKLIATNGHGSWVDAN*	hallmark_hmm	common_virus	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0011	shell	direct	high	884	0.999	GCA_003352365.1_00727
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	723141	723392	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	7914	8165	GCA_003352365_1_1_705	GCA_003352365_1_1_705	-	1887933	.	PDB:1WRU_A	Tail-protein	MSNNYPYENDVTVEVDDKAHNSWKSYDIDSDFLIPADAFKFDLGVPSNSTVLPDFSGAEVKVRINGELVMTGIVDTTQHTYYE*	hallmark_hmm	common_virus	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0012	shell	direct	high	251	0.996	GCA_003352365.1_00728
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	723382	724716	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	8155	9489	GCA_003352365_1_1_706	GCA_003352365_1_1_706	-	1887933	.	COG4228	Mu-like prophage DNA circulation protein  [Mobilome: prophages, transposons]. 	MGWTMPVQRASFRGVRFDVLSVDDDVYRSTIEHAYPFVNGADVEDLGLNPLTVRMQAVFYGTGYYTDFKKFLSVLQKSGAATLVHPIRGRLQNMICTGASFHHEAEMIDYVALDLTFIESTPAKPIFVFNYSLLAKIDALLTELENFVDDVMALYGEFMEIVAFAANTKSRLLGVYGALFGCFEQVRGLFDFDKTKYGVSPVVTQDNFKAKSSRAVRDLVTMIDSGLRQIASCKDLTLRAKFDEVLRTIRQIKHIPADLVSGKNIKSAKEQAALKSLTTSFSKDDTESVHLMMQLASSVALLRIATELVEDDDLLPQDIDYITTQVRSQIMDNLQLLRKQVDDEHRGENITVLSTPNTSFYTAAHNTAEQLRNKAHKFTQLALAAINRKPPLMVREVPFSGTVQQIAHAFYQDYKRADELLRLNPQIRYPNFIERGEWLNSYVK*	mmseqs_cdd	nonviral_gene	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0013	shell	direct	high	1334	0.999	GCA_003352365.1_00729
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	724869	726734	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	9642	11507	GCA_003352365_1_1_707	GCA_003352365_1_1_707	-	1887933	.	PFAM:PF10145.8	minor-tail-protein	MGKTTWGQRLGNVGRNIAGATVGVAAGAAVAVPKIRKAADYDLEVAKIANTAYSGASIEEKTKGKEKIHGAIKASLNYGGTKEDALGAVGRLIGEGNVSVEDALKLLPTIQMNATATGASTDDIAALVNSLLNFGIKADDIQQALDYASASGKAGGFELKDMARYAPEFLSAAGNAGLGGLEDLKQVFKGAQQVYKVSGGTGQSSTNLVNFFSKLRSSDTAKKFEKLEVYDPKTKKTHGIDFEKSMTNEMKTGKNAIEAFMSIIDQVLASDRTYQKLLKKLNNAKDDKEAQAIAEHIAKYVETTKLAEVMPDIQAGTAMFAMRRDKNTAQNVDEQYAIAEKGDFNKEDFDFMRQQNSVRFQIAKNKQEMNSIENWNGANDRLGNAADWLSENIEEFPNLTKAVVGATDALQIFSAGLAGFSLVDLLTGGKVGGGALGKVTQGAATTSAIANGAGKLLNIGGKAATATGAAMGVGGLMIAGEERTTEEAKAEEKAEAKTAQEKQLENQFYPNAYGGNKPTTTHYAPQGFGYNKNSVWGTASRSGEVAEIARKDEVAALRLERGTLTQAQYDERTRQSAVKIAEIRNQGKGYSGLSVAANDTDSALSRTLGDLSSLANYQADF*	hallmark_hmm	common_virus	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0014	shell	direct	high	1865	0.999	GCA_003352365.1_00730
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	726852	727007	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	11625	11780	GCA_003352365_1_1_708	GCA_003352365_1_1_708	-	1887933	.	.	hypothetical protein	MAELNLALTLKARDQASRVFQRAQSQIKQSTKAMASARETLGVRSEHKIQQ*	.	hypothetical_protein	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0015	shell	direct	high	155	0.994	GCA_003352365.1_00731
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	727054	727260	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	11827	12033	GCA_003352365_1_1_709	GCA_003352365_1_1_709	-	1887933	.	.	hypothetical protein	MFDAEKNYRSAVILLAKFGFTAEEVRAMCHAEVAAWVASWQYSQGIKTQSEKGNTVHYNLMRRKTKGA*	.	hypothetical_protein	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0016	.	unmatched_CDS	none	0	0	.
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	727275	727616	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	12048	12389	GCA_003352365_1_1_710	GCA_003352365_1_1_710	-	1887933	.	PFAM:PF06528.11	tail-assembly-chaperone	MRLLLGISYEDKRYFDFDVRLLTLGGECAALEKVAELGLDEKENLTKAEQMLVDLAYLSEQLDIIGIAQDKLTPQFLLDNLATDDYVLITQAIAELRKKHIDAGKNPSKAETE*	phrogs_hmm	hypothetical_protein	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0017	shell	direct	high	341	0.997	GCA_003352365.1_00732
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	727616	727987	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	12389	12760	GCA_003352365_1_1_711	GCA_003352365_1_1_711	-	1887933	.	PFAM:PF10618.8	tail-tube-protein	MEKYAGTAVLEVNGVEFEITDLNVTKQTGRKLVKTMNSEGRARGFAKGITTWELSVTAALPIDGSEIDWAGISDAKITVYPLNQEDKRTSYLGCFTTQVGEKYTVDNEAVIDIQMNALKEVKE*	phrogs_hmm	hypothetical_protein	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0018	shell	direct	high	371	0.997	GCA_003352365.1_00733
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	727997	729412	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	12770	14185	GCA_003352365_1_1_712	GCA_003352365_1_1_712	-	1887933	.	PDB:5LI4_E	tail-component	MAEMNIDFDNIPTSLRKPGVYTEYNSRNAVSTLPTNEQNVLIVAPMLNATKAFSAPTPIYSDVDAKNTFGAGSWTHLMARIAIQNNTMIRLTVIGLKESDSGVAATGTITLTGTASNAGVLKVIIGGLDYAVAIAKSETAANIAARLNAVINAGEYCPVSATVNEGTVTLTAKCKGEIGNEISVNATLSVNDMAVNVSALANGAENADLVAALASVAGQHYHVIISPFADDKNAKALREHLESVASPVEKKPGVGVLGFNGTLASGTTYTEKINANRITVGWYKGAVESNALIAAGYGAVIAGEEDPAKPLNTLEIKGLTPVDATQTPLKTEVNQALFHGLTPITVVNNRVQIMRAITTYTKSPANVDDPAWLDLTTIRTLDYTRKAIEQRIELRFPRAKLSNRTPPKVRSEILDVLYRLEQQEILENVDANKGKLLVVRNGKDPNRLDTAIPADVVNGLHVVANRIDLIL*	hallmark_hmm	common_virus	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0019	shell	direct	high	1415	0.999	GCA_003352365.1_00734
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	729405	729587	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	14178	14360	GCA_003352365_1_1_713	GCA_003352365_1_1_713	-	1887933	.	pfam10948	Protein of unknown function (DUF2635). This is a family of phage proteins with unknown function.	MKVKAAIGIKVPMEHQPYTYIEQVPVEVEPSIYYQRRINDGDLIVITETRSRKEKEKDNG*	mmseqs_cdd	nonviral_gene	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0020	shell	direct	high	182	0.995	GCA_003352365.1_00735
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	729559	729852	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	14332	14625	GCA_003352365_1_1_714	GCA_003352365_1_1_714	-	1887933	.	PFAM:PF08873.10	portal-protein	MRTLFNNATFKGGAITAYAIEYDAIYDDLSPLEDGRYPEMTQDSKNPDYLFTHYHGELSPPEPMLERIGNNIYDPISGAKVPFEVETQNESESSNRH*	phrogs_hmm	nonviral_gene	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0021	shell	direct	high	293	0.997	GCA_003352365.1_00736
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	729932	730237	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	14705	15010	GCA_003352365_1_1_715	GCA_003352365_1_1_715	-	1887933	.	PF17891.1	Mu-like prophage FluMu N-terminal domain	MAKKQQNKTDDEVKTDSAENTTETDRTLDELDDTPKGSDVIHPIAYAVTLRAIHPQASYGRCGYRFNKESAVEIPVENLTGEQVIMLAEDPWLELIPICDK*	hhsuite_tools	hypothetical_protein	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0022	shell	direct	high	305	0.997	GCA_003352365.1_00737
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	730277	731197	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	15050	15970	GCA_003352365_1_1_716	GCA_003352365_1_1_716	-	1887933	.	PFAM:PF10124.8	Major-Capsid-protein	MFKKSEVLKAIETQFKKDFAAGLGLIKPQWDLIAMKVSSNTKVNTYGFLGQFPKMVEWVNKRQRKVMQAQGTSIENKLYESTVGIARTDIEDDQVGLFRPMVQQAAQSAAELPDDLVFGLLKAGKTTLCYDGQNYFDTDHPVFDNVDGTGSSKEQSNITTGTKTEAPMFYIFDTTNAIKPLIWQERTAPEIETKFAPSKSDTVFNEDIYEWGVRARGAAGFGFWQLAHCVEKTELTAENIMDVIAKMQSLKGDGGKLLNIRPNVILVPPALEFKARQICEGELINGTTNILKGRLKVIVSPQIIAE*	hallmark_hmm	common_virus	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0023	shell	direct	high	920	0.999	GCA_003352365.1_00738
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	731197	732246	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	15970	17019	GCA_003352365_1_1_717	GCA_003352365_1_1_717	-	1887933	.	pfam10123	Mu-like prophage I protein. Members of this family of proteins comprise various viral Mu-like prophage I proteins.	MHIKPIALSFALNKKTNGRIQLFPFGRFYSQDGRTEGAGGWYVDDTNGYTLAEDINQLKIKLMIDYEHQTLFIEKNGKPNPAAGWMETVEYISGEGIFVDVDWTKKAHQQIRDGEYRYISPLFLAEPDGKVTKVLNAALTNRPACHDLAEAVAFSSQFNQHQHKKDNPMLELLRQLFGTPDATEYEMKQKLTALSAAKGDSPVALSDVYGKLKEKDGEVVALTAKVGAEPDPSKYVPLSSMKDVQDKLNALSAQVHGDKVNDLIQTALSDGRLLPSQKEWAEKLGKSDITALSDYLTVATPNQALAGGHQAKEDPNKDKQVALSAAEQAAARALGMTEAEFIKEHKEQK*	mmseqs_cdd	common_virus	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0024	shell	direct	high	1049	0.999	GCA_003352365.1_00739
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	732500	732985	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	17273	17758	GCA_003352365_1_1_718	GCA_003352365_1_1_718	-	1887933	.	PFAM:PF05069.12	Virion-morphogenesis-family	MIDVKINNEKELIHALSQLAQHVKYNVPLMRTIAGTMQSAVDQNFEAGGRPAWLGVKSRPDGKPLIDSSALRNSIHSSWDNNEAQVGTNLKYAAIHQFGGKTSPHKIKPVTKKALVFGGIVRKSVDHPGSDIPARPFLVLTPQDEDDILEDVQAYFRSVVK*	hallmark_hmm	common_virus	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0025	shell	direct	high	485	0.998	GCA_003352365.1_00740
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	733096	734373	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	17869	19146	GCA_003352365_1_1_719	GCA_003352365_1_1_719	-	1887933	.	PFAM:PF04233.13	minor-capsid-component	MPSVNFVLGLEPKKAIEFLRDKKAILGHFDEDALMDSARAKATRIANLSSLEMSKDIYQSLVDAQTQGLPFSEWKKGIFEHFKKKGWIAGYDKEYLLADPKTGEYFGSPRRLETIYRTNMQSAYSSQRYAEMRDNADNRPYWQYSAVNDDRTRPSHSAMHGLVYRYDDPFWATFYPPNGFNCRCSVIALAERDIKRRNLVVGDSADRLIDYDRKINSTTTEKTTAFKLSDDKWITTDRGFDYNVGRTVYKPNLALYPESLAHQFAKREMGGEGFKFDFKQFEKEFSPYVDDYKKLKGKNEREAFLNPIRERFKMDYKFIAGVLNEDTKQQIKTDLSTVWLSDDSLIKQIANRYGQDFDFDDYARLPDVLYSPDKIEQDGKNTFKFYKEVDSRRLIAVIKVLNGSNEIYLTSQHLASDRQWRKAFK*	hallmark_hmm	common_virus	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0026	shell	direct	high	1277	0.999	GCA_003352365.1_00741
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	734360	734557	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	19133	19330	GCA_003352365_1_1_720	GCA_003352365_1_1_720	-	1887933	.	PF06074.12	Protein of unknown function (DUF935)	MINFNRQLDPVVRQLAVVLTACNTYEEASDKLAEIYPDLDNAEHQRYLTQAVFLSELLGVSNAKR*	hhsuite_tools	hypothetical_protein	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0027	cloud	direct	high	197	0.995	GCA_003352365.1_00742
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	734550	735995	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	19323	20768	GCA_003352365_1_1_721	GCA_003352365_1_1_721	-	1887933	.	PDB:5NGD_C	Portal-protein	MKIWEKIKTLVGSKTEPIQTDEAMVTANGRILSDHPSNRITPSKLKSILEDAENGDITAQHELFMDIEEQDSAIGANIQTRKRAILTLDWRIAEPRNATPAEEKLQTEIDELFYQYPNLENLLMDMMDAVGHGFSALEIEWKLENGKYIPHNFIPRPQSWFKLDKNDNLLLKTPTNPMGEPLRQFGWVVHSHKSRSVQLARMGLFRTLAWLYMFKHYSVRDFAEFLELYGMPIRIGKYGAGATNEEKRTLLRALAQIGHNAAGIMPDSMKIELHNAANTGAGSANNPFLQMVDWCEKSIARLILGQTLTSGADGKSSTNALGNVHNEVRRDLLVSDAKQVAQTITQQIILPYLQINVDPNIALHRVPYFEFDTKKYDDLSTFADAIPKLVGIGVQIPEKWTRDKLGIPEAQDGEVVLKAVQSDFNPDLKTPGKSTALSAHVVGCQCAGCLGKGARVALSAGNNGETEQDLLDNSLRGVKCD*	hallmark_hmm	common_virus	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0028	shell	direct	high	1445	0.999	GCA_003352365.1_00743
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	735999	737384	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	20772	22157	GCA_003352365_1_1_722	GCA_003352365_1_1_722	-	1887933	.	PDB:4BIL_D	Large-Terminase	MHLAIAAPRGEAKSTLVSQLFTLYCLVTQKKRYALIVMDSIDQAYPMLEAIKVELEFNQRLRIDFPEMAGQGRVWQAATIITKANQKVQVAGSGKKLRGLRHGAYRPDLVVLDDIENDEQVRSPEQRDKLHDWLKKTVLPLGAAGDKLDVVYIGTILHYDSVLNRTLSSKAWKTAKFKALIRQPDDMSLWDKWEDFYLNEGEAVADAFYTQNQAAMDKGAVVSWAARPILTLMKIRARDGHATFDSEYQNDPLSSDDAIFANAIKYWTELPSDLIYFGAVDPSLGKAGASRDPSAILVGGYQRATGKLYVVEAQVKKRLPDLIIEDVIRFQQQYKCHRWFVETVQFQEFLKDELVKRSAQRGAPVPATAIKPNTDKMLRIESLQPHMVNGLILLHSTQATLIAQLRHFPKADHDDGPDALEMLWKNSITNAAPIEWIGLNDENLGHDDFEAEDDLYSIWRG*	hallmark_hmm	common_virus	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0029	shell	direct	high	1385	0.999	GCA_003352365.1_00744
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	737353	737640	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	22126	22413	GCA_003352365_1_1_723	GCA_003352365_1_1_723	-	1887933	.	PDB:4BIL_D	Large-Terminase	MKNKELLAELKAYSDSLRQKVEAKFEEWDDSLAAISERRKKVLDPVSGYDFFVSNYFPHYVRSRSRSQLHNYLFEQLTSITTAIISAFSHCCTTW*	hallmark_hmm	common_virus	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0030	shell	direct	high	287	0.997	GCA_003352365.1_00745
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	738187	740031	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	22960	24804	GCA_003352365_1_1_724	GCA_003352365_1_1_724	-	1887933	.	COG1132	ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]. 	MFNKIFSWFENRLNPYPESNPTTPKKGLFRFIWSSIAGMKGWILLLAILTVGTGVMEAVLFQFMGTLVDWLGTFTPEKLWQEKGHLLIGMAALLLISIVWGFLASTVRLQTLQGVFPMRLRWNFHRLMLGQSLSFYQDEFAGRVSAKVMQTALAVRDTVLTLADMFVYVLVYFITSGVVLVALDSWFLLPFITWIILFGLILRTLIPKLSKTAQRQADARSLMTGRITDAYSNIATVKLFSHGSREATYAKRSMQDFMVTVHAQMRLATSLDTLTYATNILLTLSTAILGIILWKNGQVGVGAIATATAMALRVNGLSRWIMWESARLFENIGTVNDGMNTLTKPHTIVDKPQASPLQVKQGEIKFNDITFAYDPTKPLLNHFNLTIKPGEKVGLIGRSGAGKSTIVNLLLRFYEAQQGEITIDGQNVLNVQQESLRRQIGLVTQDTSLLHRSVRDNIIYGRPNATDEEMVLAAERAEAADFIPFLSDAQGRKGYDAHVGERGVKLSGGQRQRIAIARVMLKDAPILLLDEATSALDSEVEVAIQESLDKMMENKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHAELLELNGLYAKLWNHQSGGFLSGSAE*	mmseqs_cdd	nonviral_gene	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0031	persistent	direct	high	1844	0.999	GCA_003352365.1_00746
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	740110	741006	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	24883	25779	GCA_003352365_1_1_725	GCA_003352365_1_1_725	-	1887933	.	cd06995	"AraC/XylS family transcriptional regulators similar to Escherichia coli YkgD, N-terminal cupin domain. This family contains mostly bacterial proteins containing an AraC/XylS family helix-turn-helix (HTH) DNA-binding domain C-terminal to a cupin domain, and may be possible transcriptional regulators. Included in this family is YkgD, an uncharacterized Escherichia coli protein thought to be a transcriptional regulator. Proteins in this family belong to the cupin superfamily with a conserved ""jelly roll-like"" beta-barrel fold capable of homodimerization."	MDYLDKLTHLAQVRGEINIRCEFQGEWQISHQEKDAGKGIFHLIEQGECWLTLNEKQFHLKEGDIFFLPQNQPHFMHYSVNKRADIPTKKSHQGLFELHQIGRGTPDLKMFCGNFYYQQDALLTASIPEYLHINLCDTPIHPLVQLFLQEAQKNDAGTKSVVDALSNVLLIYILRHAIQQNLIEQGILFALQDKRLNTALIAILQQPQNDWHIEQLAELATMSRANFIRIFQQQLGMSPGRFLTKVRLQSAAFLLKQSQQSVLAIALEVGYQSEAHFCKVFKNYYQLSPSQYRKSVSL*	mmseqs_cdd	nonviral_gene	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0032	persistent	direct	high	896	0.999	GCA_003352365.1_00747
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	741118	741459	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	25891	26232	GCA_003352365_1_1_726	GCA_003352365_1_1_726	+	1887933	.	pfam02627	Carboxymuconolactone decarboxylase family. Carboxymuconolactone decarboxylase (CMD) EC:4.1.1.44 is involved in protocatechuate catabolism. In some bacteria a gene fusion event leads to expression of CMD with a hydrolase involved in the same pathway. In these bifunctional proteins CMD represents the C-terminal domain, pfam00561 represents the N-terminal domain.	MFADWKEHTSHVKKSFGALGKQHPKMLQAYQALGAAAAEGNVLDAKTRELIALAVAVTTRCESCISVHAEEAVKAGASEAEVAAALATAIALNAGAAYTYSLRALEAYSVQKA*	mmseqs_cdd	nonviral_gene	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0033	persistent	direct	high	341	0.997	GCA_003352365.1_00748
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	741558	744332	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	26331	29105	GCA_003352365_1_1_727	GCA_003352365_1_1_727	-	1887933	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MANDKTLFDWVEDRKSMLEEMEQTDFFALPEFVSNNLKYPFFEWQKSALENFVIFDRTSKLKDFPGIKNRPTHLLFNMATGAGKTMMMAALILYYFEKGYRHFLFFVNQNNIVDKTENNFIDPAHAKFLFTEKILQGDTVIPIRKVETFSPHSDGIEIKFTSIQKLYNDIHTERENQTTLADLHKLNLVMLGDEAHHLNAQTKGKKQDELDLEKEMNDRTSNAEIERKGWEHMVLELLLNKNGNPSQNVLLEFTATLPENADVQQKYADKIITKFGLKEFLQKGYTKEINLVSSTLGKKERVLHALLFAWYRHQIALKYGIANFKPVMLFRSKTIDESKADYLAFLNWVEKVQAVDFSFLTTFSTSLNDGDNANEQGKTRTEQALKFMQENGFEFAHLANWVKQNYQKHNVIITNSETNKKKTEKTDSETEKLLNNLEAADNPIRAIFTVDRLTEGWDVLNLFDIVRLYEGQNGGGSNKKSGKTAAATVSEKQLIGRGVRYFPFAFEGKQPNKRKFDNDMQHELRILEELFYYTHDEQSRYISELKNELRKDGYLPEKDDDKVLATFKLKSEFADNKDFRELLIWANKKIPNPNAKSNNADSLQANPQTLSFQVHDNQLLQETQFTADENDETARQIGTQNNFTQTIKMSEMERHIFNKALHIKGKNSQSLFHFDRLQSKLNIQNRNELQNKLLKDWQIEFLGLGQDKQVLPDDKLAGCLKILEMVEKHLNESDKPFIGTKEFTPKKLWEIFGTPKQKWVKKDDVKTTIATQNDWYVMDNFAGTSLEEGLIQFISERLGDLKSKYDVHLIRNEEVFKLNNFADGEGFMPDFVLLLKDKQKSSSDSVDGFLHYQIFIEPKGGHLVETDRWKEEFLEAITAEYGKDKILQKDTPHYRLIGLPFFTDHQKNGQFTESFPLGETLLEK*	common_virus_hmm	common_virus	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0034	persistent	direct	high	2774	1.0	GCA_003352365.1_00749
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	744322	744798	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	29095	29571	GCA_003352365_1_1_728	GCA_003352365_1_1_728	-	1887933	.	PFAM:PF01555.17	DNA-methyltransferase	MNRQYIGIEQMDYIETLAVERMKKVIDGEQGGISKAVNWQGGGEFVYAELAPFNETAKQQILACEDSDGIKTLFEGLCERYFLKYNVSINEFSQIIEEPEFQSLALDEQKQMVLEMLDLNQIYVSLSEMDDEQFAGCLNDDDKALSRAFYQAEKKDGE*	phrogs_hmm	hypothetical_protein	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0035	shell	direct	high	476	0.998	GCA_003352365.1_00750
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	744851	745153	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	29624	29926	GCA_003352365_1_1_729	GCA_003352365_1_1_729	+	1887933	.	.	hypothetical protein	MSDSLVVSSIIRLISASGFCPSKSSTLWASLAEIIWTSSSFHKSDNGLPSLSSRYRLTLGVPFFVKIILPALIPLSISSCPQIQCFPFGGSSNLPLKYLA*	.	hypothetical_protein	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0036	.	unmatched_CDS	none	0	0	.
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	745122	745283	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	29895	30056	GCA_003352365_1_1_730	GCA_003352365_1_1_730	-	1887933	.	.	hypothetical protein	MVNQKLTNFSLKRLKRQILKITHILKKIQIEGMVRLTLLKKVKVRQDILMVNY*	.	hypothetical_protein	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0037	.	unmatched_CDS	none	0	0	.
GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote	cenote	CDS	745296	746273	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C42	30069	31046	GCA_003352365_1_1_731	GCA_003352365_1_1_731	-	1887933	.	COG2189	Adenine specific DNA methylase Mod  [Replication, recombination and repair]. 	MKANIQTELTQALLSHEKVWANEEKTILAKNILLDLVEKTDPTIIGLLLSNDELKRHFFVEVNGVLVFKLQDFRFFLDKHSVNNSYTKYANRIGLTDGNRFLKDSSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRNNDQSDSQLYTKLTRKRQEIFFNQTLAFDEIDRLFDAKAFSKFSRHTADGKQAVGKIKHRSDGTPAENLIIKGNNLIALHSLAKQFKGKIKLIYIDPPYNTENDSFKYNDKFSHSTWLTFMKNRLEIAKTLLADDGVIFIQCDNNEYSYLNVLLNDIYSRNNHMNTIIWKKVKSAKKQSSFLSNVVEYIY*	mmseqs_cdd	nonviral_gene	C42	31046	715228	746274	GCA_003352365.1|CP031239.1@region_715229_746274@tool_cenote_CDS_0038	shell	direct	high	977	0.999	GCA_003352365.1_00751
GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote	cenote	CDS	1435260	1436651	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C92	1	1392	GCA_003352365_1_1_1402	GCA_003352365_1_1_1402	-	1887933	.	PFAM:PF10145.8	minor-tail-protein	MENHKLLELKPLLWVQRSLHQLSIPFEILCRLKMLWWGVARQVPGLKDKFGQFTPKYDEWKNKIKQLSTELPLTTNQIGDMVTAAARMDIQENELEDFIRLNTQMATAFDAENPDELVELFGKVQKNFKLTTKDAKELADTINYLDDNAISKGTDIINFLNNTSGIGNLVKISEKNLAALGSTLLTAGNEASTSAKAIESTFNRLSKATRMKPVNNGLKALGLDPKAIQKAMVKDAQGTLMMIVEKIKKLPKHLRAGVISDIAGGNYNTQLAGLVANTEEWRRQIELANSEEAKNSMAREFQTRMTTLSAKWQLFKNRLFNVNSSVGASLKDTMTSLMDGVGYLLDKIQTWIDKHPKLTSTIAKTAAAIGGSLSLLGALSLALSFILYPAARLFLGLSKLNVILHKFSGHLSSAGWLILRGLLSPLKLIALAISPLGIVKCVGLRPTYIGLYVVISITKLKQA*	hallmark_hmm	common_virus	C92	9717	1435260	1444977	GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote_CDS_0001	shell	direct	moderate	1293	0.929	GCA_003352365.1_01435
GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote	cenote	CDS	1436826	1437221	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C92	1567	1962	GCA_003352365_1_1_1403	GCA_003352365_1_1_1403	-	1887933	.	PFAM:PF15254.5	tail-length-tape-measure-protein	MNNLQLTVLLNAIDKISAPVRSASKSVNELSAKLKESKSIQRQLNQQNKQHQAAMKQYASAINPLKSKLDSLNQELEQAKQKAASYAQYMKNAQHPTAGLQKEVEKAKSAVKNSSKNKLMQQINYSKYAKN*	phrogs_hmm	hypothetical_protein	C92	9717	1435260	1444977	GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote_CDS_0002	shell	direct	high	395	0.997	GCA_003352365.1_01436
GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote	cenote	CDS	1437313	1437735	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C92	2054	2476	GCA_003352365_1_1_1404	GCA_003352365_1_1_1404	-	1887933	.	PFAM:PF05069.12	Virion-morphogenesis-family	MVTVEEVQAKLTALIANLSPQARRQLGRKIGQALRKSQSNRIARQQNPDGSAFEPRKPCKEFRKKKGRIKRKAMFAKLCTARHLKVRSNGNEVSVGFNGSSAAIAAVHQYGLSASPSKYKDFKVQLHQNQLQAQVSQQTE*	hallmark_hmm	common_virus	C92	9717	1435260	1444977	GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote_CDS_0003	shell	direct	high	422	0.998	GCA_003352365.1_01437
GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote	cenote	CDS	1437886	1438137	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C92	2627	2878	GCA_003352365_1_1_1405	GCA_003352365_1_1_1405	-	1887933	.	.	hypothetical protein	MTDQFDRAQQLEEMQREIALKKHRTFKAVSRLYCEDCEDCEDCEDCEDCEDCEDCEDCEDCEDCEDCEDCEDCDAPSQKNADK*	.	hypothetical_protein	C92	9717	1435260	1444977	GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote_CDS_0004	cloud	direct	high	251	0.996	GCA_003352365.1_01438
GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote	cenote	CDS	1438134	1438352	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C92	2875	3093	GCA_003352365_1_1_1406	GCA_003352365_1_1_1406	-	1887933	.	NF038368	Rz1-like lysis system protein LysC. LysC is an Rz1-like component of a phage lytic system, substantially overlapping although not fully embedded in the gene for the Rz-like LysB component. The phage lysis defect in the absence of a functional LysB/LysC system is appears in the presence of high concentrations of divalent cations.	MMLNACSTQQEIIKSPILCPQTTECSAYSPQIRTNGELAEAYLQTQHHLDLCIIENSSLKKCIDEFNKKEQP*	mmseqs_cdd	nonviral_gene	C92	9717	1435260	1444977	GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote_CDS_0005	shell	ambiguous	low	40	0.183	GCA_003352365.1_01439
GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote	cenote	CDS	1438312	1438662	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C92	3053	3403	GCA_003352365_1_1_1407	GCA_003352365_1_1_1407	-	1887933	.	CDD:TIGR03495	phage-lysis-regulatory-protein	MFNFLTAKERSILLIGPILLVLLIMFLGFEANYWRKEMLKEEQLKLKWQNAYIELNHSVQNFAEQQAQLIQAVNNLKAKQNQQTQNLKNVLKSNQDWADRPLPDDVKRLFNSAGNH*	common_virus_hmm	common_virus	C92	9717	1435260	1444977	GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote_CDS_0006	shell	direct	high	350	0.997	GCA_003352365.1_01439
GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote	cenote	CDS	1438647	1439165	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C92	3388	3906	GCA_003352365_1_1_1408	GCA_003352365_1_1_1408	-	1887933	.	CDD:cd16901	P1-lysozyme	MIKRSAKYICAISAIVGLVIATHGNEIRTSEKGLLLIGNAEGCMKKPYQCPADVLTVGIGITDAVEKIDRNKIYTLQEIAELYVKGIKQSEKCVNQYANGQTMPQGAFDALVSITFNVGCGKLKNSSLFKMARQGYSKAMCGQFERWIYAAGKPLKGLIERRQKEKALCLIS*	common_virus_hmm	common_virus	C92	9717	1435260	1444977	GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote_CDS_0007	shell	direct	high	518	0.998	GCA_003352365.1_01440
GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote	cenote	CDS	1439158	1439379	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C92	3899	4120	GCA_003352365_1_1_1409	GCA_003352365_1_1_1409	-	1887933	.	pfam16080	Bacteriophage holin family HP1. Phage_holin_2_3 is a family of small hydrophobic phage proteins called holins with one transmembrane domain. Holins are produced by double-stranded DNA bacteriophages that use an endolysin-holin strategy to achieve lysis of their hosts. The endolysins are peptidoglycan-degrading enzymes that are usually accumulated in the cytosol until access to the cell wall substrate is provided by the holin membrane lesion.	MHDTPSRASYTSGIFAFLIGRIADMFSNVNWADVASITGIVIGVATFLVNWYYKKKDFELKEKELKQRSHHYD*	mmseqs_cdd	common_virus	C92	9717	1435260	1444977	GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote_CDS_0008	shell	direct	high	221	0.995	GCA_003352365.1_01441
GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote	cenote	CDS	1439381	1439590	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C92	4122	4331	GCA_003352365_1_1_1410	GCA_003352365_1_1_1410	-	1887933	.	COG5004	P2-like prophage tail protein X  [Mobilome: prophages, transposons]. 	MQVYAQQNDNLDAILYRHFGRSEGLLEITCELNPHLMDKPIIPIGTVVNLPDADTEKISVANDTIQLWS*	mmseqs_cdd	nonviral_gene	C92	9717	1435260	1444977	GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote_CDS_0009	shell	direct	high	209	0.995	GCA_003352365.1_01442
GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote	cenote	CDS	1439590	1440096	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C92	4331	4837	GCA_003352365_1_1_1411	GCA_003352365_1_1_1411	-	1887933	.	PFAM:PF05926.10	head-completion-protein	MSDGAISVKLAPDYEMGEVQQQLNDYDTSDDIISNDGFFPDMSLSQFRNQYRADGTITTQRLQDALIEGMASVNAELSTFKTQSKRDSLEQITAPSVNGESVLVYRYKRAVSCLALANLYERYASYDSTNDGEKKMALLKDSIDELRRDARFAISDILGRKRVDAELI*	hallmark_hmm	common_virus	C92	9717	1435260	1444977	GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote_CDS_0010	shell	direct	high	506	0.998	GCA_003352365.1_01443
GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote	cenote	CDS	1440389	1441039	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C92	5130	5780	GCA_003352365_1_1_1412	GCA_003352365_1_1_1412	-	1887933	.	PFAM:PF05944.11	small-terminase	MRPTKRHFLEFSAAIANAAETEDLSDFTEYDKMCRILARHRKDLKNIQSTERKGAFKKQILPDYLPWIKGALSVGSGKQDNVLMTWCVWAIDCGEYHLALQIADYAVFHDLRLPEPFTRTLGTLLAEEFADQAKTARAANKPFDESYLAQIQRITADCDMPDESRARLLRELGLLLVEKHPEQALAYLERALGLDQKIGIKGDIKKLKKQLSTTEY*	hallmark_hmm	common_virus	C92	9717	1435260	1444977	GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote_CDS_0011	shell	direct	high	650	0.998	GCA_003352365.1_01444
GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote	cenote	CDS	1441051	1442100	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C92	5792	6841	GCA_003352365_1_1_1413	GCA_003352365_1_1_1413	-	1887933	.	PFAM:PF05125.11	Major-Capsid-protein	MNKFTKQKFNAYVVGVAQDNGEDVAFIANGGQFTVEPTIQQKLENAVFESSDFLKHINVVMVQEMKGSALRLGVLSPVASRTDTNTKARETTDIHSLQENTYSCEQTNFDTHLNYATLDSWAKFPDFAARVGKLKAERIALDRIMIGWNGTSVAATTNRTEHPLLQDVNKGWLVQIEDKAKARVLKEIEKSSGKIEIGAGKTYKNLDALVFALKEDFIPAQYRDDTKLVAIMGSDLLADKYFPLINQEKPSEILVGDTVISQKRVGGLQAVSVPFFPKGTVLVTSLDNLSIYVQEGKVRRHLKDVPERNRVEDYLSSNEAYVVENYEAVAMAKNITILEAPAPISPVAA*	hallmark_hmm	common_virus	C92	9717	1435260	1444977	GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote_CDS_0012	shell	direct	high	1049	0.999	GCA_003352365.1_01445
GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote	cenote	CDS	1442286	1443956	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C92	7027	8697	GCA_003352365_1_1_1414	GCA_003352365_1_1_1414	+	1887933	.	CDD:PHA02535	terminase-ATPase-subunit	MRLIFPASTIASWKDREKWDDIAPVGRVELALETRLNLLIAKEEKSGSDYKEIDLLGRQMERMARVKKYSFGDGNEVDLNPKLANRNKGNRKKAEPNAIDQEQEELLINGFLDGMFNYQRIWHKAKEHRIRNILKSRQIGATYYFAHEAFIDALTTGHNQIFLSASKKQALQFRSYIVNYAKQTADVDLKGETIKLPNGAELIFLGTNSATAQSYHGNLYFDEVFWVPKFDVIRKVASGMAAQKMYRQTYFSTPTTIAHPAYAFFSGKAFNRNRTKSEKIEIDISHANLKNGKLCADRQWKQIVSIYDAMEGWCNLFNIDDLIAENSKEEFEQLFLCQFADDNTSAFKFADLQLCQVDSLEEWHDYKPFYQRPFGNREVWLGYDPAFTGDRAALAIIAPPKVEGGDYRVLHWQTFHGMDYEAQASRIKSFCDDYNVTRIVIDKTGMGSGVFQEVKKFYPMAIGLDYNADLKNEMVLKTQNLIQKRRLKFDGNEIITSFMTVKKRITGTGKITYVSDRSEDASHGDLSWAIMNCILNVPYGLNGDVSSNQSTIFTFE*	hallmark_hmm	common_virus	C92	9717	1435260	1444977	GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote_CDS_0013	shell	direct	moderate	1565	0.937	GCA_003352365.1_01447
GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote	cenote	CDS	1443966	1444976	GCA_003352365.1	CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365.1_CP031239.1	GCA_003352365.1|CP031239.1	GCA_003352365_1_1	GCA_003352365_1_1@C92	8707	9717	GCA_003352365_1_1_1415	GCA_003352365_1_1_1415	+	1887933	.	CDD:PHA02536	portal-vertex-protein	MSKKSKKSIALSTGNQAQAFSFGEPIPVLDRAEVLNYFESVLMYEKYYNPPINLSYLAKALNASAHHNSAITVKKNILLSTCKTTALLPRTQLEKLVQDYLVFGNAYLEKVENTFGKVIALKSPLAKYIRVGVKKGIFYQIVNGFDEYEFPKDAVFNLINPDVNQEIYGVPEYLAALQSAFLNESATLFRRKYYLNGAHAGSIIYMTDPTQNKDDIEAIKTQIRQTKGTGNFKNLFVYIPDGKKDGMQVIPLSDAIAKDDFLNIKNTSRDDVLAAHRVPPQLMGIVPNNTGGFGDVEKATRVFFINEIIPLQERLKEINSWVGEEVITFSDYKLLN*	hallmark_hmm	common_virus	C92	9717	1435260	1444977	GCA_003352365.1|CP031239.1@region_1435261_1444977@tool_cenote_CDS_0014	shell	direct	high	1010	0.999	GCA_003352365.1_01448