core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	181793	182482	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	1	690	GCA_003384255_1_3_170	GCA_003384255_1_3_170	-	278690	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MGFNAFDKNRLAALNAEQAEQAAPGGLAPAGPRNDYYIPQWEERTSYGVRRVDPYTKLFEDRIIFLGTPVTDDIANAVMAQLLCLQSMDADRQISMYINSPGGSFTAMTAIYDTMNYVRPDIQTICLGMAASAAAVLLAAGAKGQRLSLPNSTVLIHQPAMGQATYGQATDIEILDDEIQRIRKLMENMLATATGQSVEQISKDIDRDKYLTAQGAKEYGLIDDILTSL*	common_virus_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0001	persistent	direct	high	689	0.999	GCA_003384255.1_01980
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	182490	183086	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	698	1294	GCA_003384255_1_3_171	GCA_003384255_1_3_171	-	278690	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MAGPETGGAGMTDNVYQSLLRNRIVFLGSEVKDENANALCAQMLLLNAEDPEADIYLYINSPGGSVTGGMAIYDTMQWISNDVATVTMGMAASMGQFLLTAGTPGKRYALPHAKILMHQPLGGVGGTATEIAINAKMLKDTKRELSQLNADHSGHTLEQILEDSDRDHWFTAQEALEYGLIDHVYSNASQLRGDAPNQ*	common_virus_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0002	persistent	direct	high	596	0.998	GCA_003384255.1_01981
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	183204	184505	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	1412	2713	GCA_003384255_1_3_172	GCA_003384255_1_3_172	-	278690	.	PRK12287	pheromone autoinducer 2 transporter; Reviewed	MNKRPARPTRSRRRISVAPATRQLRNARQMMADDIAVARAVERGELETEEHPTHGATNAEKAAESGLQPQPSDHEKAEVATSKHGLPKLTIVLLTVAAAWLGLSFLHELSSVVAPLFFGLNLLITAYPIHTWLVKHKCPRWISATTAGTAVIVVLAAGVVGMVWSVAAMINQLQSYIPQMEKIYTQLLHWSTQLGYSQDVIADKLKKIDPQQVMSVVTSVASDTTSVVTMIIVILTGMIFMVMDTPQMHDRLRMAGSRKPDVVLALESFASGIRKYWLVTTVFGLIVALFDWAALLIIGVPLAGVWALFSFLTNYIPNIGFIIGVIPPALLALFKDGWVAAVAVVVSYSVLNFVIQSIIQPKFAGDAVGLTPTMSFVSLLLWGWVFGALGTLIALPCSLLVKATLIDHDPGARWVNALISSRPTEGLEDNPDE*	mmseqs_cdd	nonviral_gene	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0003	persistent	direct	high	1301	0.999	GCA_003384255.1_01982
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	184610	186202	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	2818	4410	GCA_003384255_1_3_173	GCA_003384255_1_3_173	-	278690	.	COG0544	FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]. 	MPSSLEKLSTNRVKLTIEMPFDELKPSLDKAYKDIANQVNVPGFRKGKVPAPVIDQRFGRGVVLQEAINDALPAAYGKAIEENTVVPLGQPEIEVTKLEDGEVVEFTAEVDVRPDFDLPDVSAISVEVPAVEVPDEDVDERVETLRQRFATNTEVERAAAKDDLVTIDLAGTRDGEALEDATASGVTYKVGSEGMLEGLDEAVTGLKAGESAEFHSTLVGGPLRGQDADIKVTVTKVCEQELPAVDDDFAQLVSQFDTVDEMRADLRTALENMARLDQAADARDKVLEEVISKIDIELPTSLIDSELEARRQQVNQQLAQAGMTVEEYLEDSEEEVDNADDFWAEIEKRSLDALKAQIVLDKMADDDEIGVEQNELTELLFRKAQQNGTSPEEEAQHMMQHNHLPDWMQEIRRGKALASMVGAATVTDSKGNALELDRIQPDGTIADKQAEEDAPAEDSAEKVDGKATEEPKAEEKAPAKKATTKKISAKKSAGAKATTKKVVDAKSDDKPAAKKPAPKKKTAAKDDKSK*	mmseqs_cdd	nonviral_gene	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0004	persistent	direct	high	1592	0.999	GCA_003384255.1_01983
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	186681	186860	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	4889	5068	GCA_003384255_1_3_174	GCA_003384255_1_3_174	-	278690	.	.	hypothetical protein	MRVSMKPSARLWVCTTLSWVQAVTSWAFVNSRENTPPSRPMTSQVVAQIASFFNDLMVS*	.	hypothetical_protein	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0005	shell	direct	high	179	0.994	GCA_003384255.1_01985
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	186857	186994	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	5065	5202	GCA_003384255_1_3_175	GCA_003384255_1_3_175	-	278690	.	.	hypothetical protein	MSVDLHHAVHDEHCDRQQEAKVESPEKRRRHGGEKERKLAPLGAR*	.	hypothetical_protein	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0006	shell	direct	moderate	92	0.667	GCA_003384255.1_01986
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	187301	187687	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	5509	5895	GCA_003384255_1_3_176	GCA_003384255_1_3_176	+	278690	.	.	hypothetical protein	MPITVAPGSVVQVRDEEWLVSTVEQTDDGQLLTVQGLSDLVRGTTAKFYEHLDNIIPLDPHDATPVADASPHYRDARLWLEATLRKTPIPLGEPTLAASKYALASACSTSTRLYSRPSIRKTCDRASS*	.	hypothetical_protein	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0007	shell	direct	high	386	0.997	GCA_003384255.1_01987
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	187702	188175	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	5910	6383	GCA_003384255_1_3_177	GCA_003384255_1_3_177	-	278690	.	.	hypothetical protein	MGVDTGGLQQPDELGEGFPVAIVRGRGGQDEGIGIGRQGPGQTVVLSGVTSDVVGLVNDDGVPFVTVKVVGEAVLLEGVHRNDDALVPAEGVAVGGDFLFDALQTYGVETDEWDSETAPHLVLHLFQHMTRTDDEDAFATAPADEFGEDHPDLDRLS*	.	hypothetical_protein	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0008	shell	direct	high	474	1.0	GCA_003384255.1_01988
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	188208	190175	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	6416	8383	GCA_003384255_1_3_178	GCA_003384255_1_3_178	+	278690	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MKRRHRNDPEVSSVAGADWAKRKPPQNLLVKATAAEDAVADELEQVWLHPTGSSPYSGAASALFPWTIAKAFLSSPAALRQTISERRRRITAHPTTPDQQVEIEALDRLNELNDAVFDSSAKYDELVRYLRSIGIDRRSSERVVVFAERVATLCWLRDRLRGDLCLAEDQIAVLHGGLSDTEQQQIVESFKQSNSPIRVLVTGDVASEGVNLHQQCHELIHFDIPWSLIRIEQRNGRIDRYGQRHSPQITTLLLEPSNPVFRGDLRVLSRLLKREQEAHEALGDAGSLMGRYSASAEEEDIKLVLAGRRDFNDVVRSVDELSPEDSLACLLASLNAPTDDKPPSAKFTEPSPLYPRPVDFLREALEAYYTTPSAAPTDTGRGGGVSWRDHGDGVVEFIPPADLRQRLEVLPQSYLQDRHVLERFSLATDETVAQAQLVRALTDDSDSSWPEAHYLSPLHPVLDWAADRALSKLSRNAVYVVRGKVDLPAVLAVGTLTDRRGLVVAASWMCIRFLDPENLTSPWITMHTSSADMLADVGVGADMSNPGPVARPDDLKPLVELAMNAADEELKSTFDAAKEGTQDRIAAWNHKTVAWQEDSQTLIPNHALRIRRTSVEEEKQLIADMEPQQRLARPLLVVVPENYPTAHEECDHAKQ*	common_virus_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0009	shell	direct	high	1967	0.999	GCA_003384255.1_01989
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	190162	190590	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	8370	8798	GCA_003384255_1_3_179	GCA_003384255_1_3_179	+	278690	.	.	hypothetical protein	MPSSDALIVVEDWISEHFFTTDARKESFQKLVLDRRKQWDGEDVPTTRTRFTERASKLATMLAALYSEDLDEAARAEAAEQAHEELLRVLGYSTGEFRIRRDGPVRWFSTAGIEQSALAVVTARPVEVVPKKKEWPHQSAGR*	.	hypothetical_protein	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0010	shell	direct	high	428	0.998	GCA_003384255.1_01990
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	190656	191279	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	8864	9487	GCA_003384255_1_3_180	GCA_003384255_1_3_180	+	278690	.	pfam03575	Peptidase family S51. 	MKSLTPHLLLCSFFTSIAPALGEGFRNKRVAFIPTAAAHEEYTAYVDSARSSWKELGSNITDVDIARMPLRTATEALEQAEIIYLSGGNSFYLLDCLRSTEIDQIIRGRLAEGAILVGESAGAIVCSPNIAYIQPMDRVPDNYSQADYTGLNLVDFFPVPHYLAPPFVKSSKEVVAQHASLPLELMNNAEAVIVEGPQRTKISSEHQ*	mmseqs_cdd	nonviral_gene	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0011	shell	direct	high	624	1.0	GCA_003384255.1_01991
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	191265	191762	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	9473	9970	GCA_003384255_1_3_181	GCA_003384255_1_3_181	-	278690	.	PDB:6Z6D_A	Large-Terminase	MRVARYHVPYDLWHQQGLLETTEGNVVQYAHVERHIEQLGTRFDIREIAFDRWGAVQMSQNLDDAGFTVVPFGQGFKDMSPPSKELMRLALEGRLAHGRHPVLSWMVDNIHVRTDPAGNIKPDKQKSTEKIDEVVATIMALDRAIRGGGSHTGTSVYDSRGLLVL*	hallmark_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0012	shell	direct	moderate	477	0.958	GCA_003384255.1_01992
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	192268	192870	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	10476	11078	GCA_003384255_1_3_182	GCA_003384255_1_3_182	-	278690	.	PDB:6Z6D_A	Large-Terminase	MMRTLDTYTPTRFMAAGSTYDKRKADFAVAFIQALKHTKGRWSGQPFQLIDWQEQIIRDLFGTVKADGYRQFTTAYVEIPKKQGKSELAAAVALLLTCGDGEERAEVYGCAADRRQASIVFEVAADMVRQSPALSKRVKILSSQKRIIYKPTNSFYQVLSAEAYFKHGFDISGVVFDELHTQPNRALFDVMTKGSGDART*	hallmark_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0013	shell	direct	high	602	0.998	GCA_003384255.1_01993
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	192897	193184	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	11105	11392	GCA_003384255_1_3_183	GCA_003384255_1_3_183	-	278690	.	pfam18756	Nucleotide modification associated domain 4. An alpha+beta fold domain typically associated with DNA methylases and likely to be involved in modified nucleotide biosynthesis.	MNNEKTTMEQLQMATDSYGTVIAYGDFVLASAYRHLGKGRIGNDARVYKLAEQPISGWGPDARGFSECELDLVAEADELFADAGHAIAWAFAHTN*	mmseqs_cdd	nonviral_gene	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0014	shell	direct	high	287	0.997	GCA_003384255.1_01994
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	193350	193619	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	11558	11827	GCA_003384255_1_3_184	GCA_003384255_1_3_184	-	278690	.	.	hypothetical protein	MNSQRAGNELLDFAEGLYDSDVPSILDELKEHSIGEFTISANQTGLTTIIWNLTQAGATLRGMTQVNDRYPDPITGERRMIPAWHLAID*	.	hypothetical_protein	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0015	shell	direct	high	269	0.996	GCA_003384255.1_01995
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	193685	194365	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	11893	12573	GCA_003384255_1_3_185	GCA_003384255_1_3_185	-	278690	.	PFAM:PF12224.7	amidoligase-enzyme	MTTLKFTKQRKGRKQLAAFLATQLRATVEYLGTPTFAYQIGEAMLDRDWLLHLPDDTDVAGLVEAAAQAGFPTDTTDEPGELGLTLAFPTTGWEDTTKGKVEATLAAKGELIAKALQIPATPMSIDAEAGTVEFPWFDVAPDPQVVEATTVLIARIIDHAKTATRASAKPAETGGNDKYAMRCWLLRLGLIGDDTKPVRRTLLKHLDGNAAWRTPPTHKDTRDEHN*	phrogs_hmm	hypothetical_protein	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0016	shell	direct	high	680	0.999	GCA_003384255.1_01996
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	194461	195711	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	12669	13919	GCA_003384255_1_3_186	GCA_003384255_1_3_186	-	278690	.	PDB:5HFJ_C	Adenine-specific-DNA-methyltransferase	MRIEQLPIADLTPADYNPRKDLRPGDPDYEKLKRSLTEFGYVEPVIWNKTTGHVVGGHQRLKVLEDLGETTVDCVVVELDETREKALNVALNKISGDWDQDKLALLIADLDASDFDAELTGFDDDEIAQLIGSLDEDEVEDDDFDLTAALEAAAFVERGDIWTVGRHRLVCGDATNAGDIELLMDGKKANLVLTDPPYNVAFESSDGLSIKNDKMSADAFYEFLLAAFTQMAGVCEKGASAYVFHADTEGLNFRRAFQDAGFKLSGCCIWVKDSLVLGRSPYQWQHEPVLYGWVKTGKHTWYADRKQTTVWRFDKPRRNADHPTSKPLDLLAYPIGNSTQANAIVLDTFAGSGSTLMACEATNRIAYCMELDEKYASVILRRYADATGDAAGITCLRDGQQLAYLDVVKAVDRGKK*	common_virus_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0017	shell	direct	high	1250	0.999	GCA_003384255.1_01997
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	195683	196873	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	13891	15081	GCA_003384255_1_3_187	GCA_003384255_1_3_187	-	278690	.	PDB:5H9U_C	S-adenosylmethionine-synthase	MCSIRTAESVCAGHPDKLADQIADQILDDILYDDKAARVAVEVMAAGRRIIVTGEITTNHRPRIRESVRTALARAGYSPLGILIYVWTRRQSSDINAGVTTSLEARGGDSSAFALQGAGDQGTVYGYATAETPERLPLPLVLAHRICERLDTAQVEGTICGIKSDGKAQVSVRYDDTGTPAAVETVVVSVQHEAGKDLAVLEREVRSLIVAPACQTYLPIDEHTEILVNPSGRFVEGGPRADTGLTGRKLMVDTYGGLGSHGGGAFSGKDPSKVDRSAAYMARLIARTIVDAGLAAECEVGISYAIGKADPVAFEVDTLGTGEYADHILTAAARDVFVLRPAGIIDVLNLRTPRYRDLAVYGHMGRDWPRWEQTWRFERDLRKAVEPRAHRAATHR*	common_virus_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0018	shell	direct	high	1190	0.999	GCA_003384255.1_01998
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	196958	197530	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	15166	15738	GCA_003384255_1_3_188	GCA_003384255_1_3_188	-	278690	.	CDD:pfam05119	Small-Terminase	MAKDGTNRGRRRVRAGAKPGPLGEKLAAGRPATRLEDPLNEPFDFAGNDIGDGAVLAGETMPEPSDYLSEIQRDGKPLGADLVYRETWQWLDQRGGSQFVAPRLIEAYAQAFARYVQCEQAISKFGLLGKHPTTGAAIASPFVAMSQSFGKQANVYWYEIYEIVRATCTTDYAGTTPGDEVMEQLLNARS*	hallmark_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0019	shell	direct	high	572	0.998	GCA_003384255.1_01999
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	197592	198404	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	15800	16612	GCA_003384255_1_3_189	GCA_003384255_1_3_189	+	278690	.	.	hypothetical protein	MVESLKLFVRTYVYWVGLILGFAIVPGSLLFTAEVAPVNTPLWLAPFAGLLLFVIDRPSTWEPPLWRALLIRVLGAGFAATMLIAFDAVASTHYGSQHWSETLLSFGLGWIVFTVVAGHMLMSSSARFGTPAHTIRDAIRTYTTWIGICFGIFYIPAAGLSAAGTLLMVLPLYGTFLAGLVLLIVDPPRRWPQPRVKALWIRLLSSVAAALLLVVTNSFYRSTRTHEIFVGDWQENLVFFVGAWALYAAVAGARYLTPGPSHEADDKLSR*	.	hypothetical_protein	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0020	shell	direct	high	812	0.999	GCA_003384255.1_02000
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	198394	200835	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	16602	19043	GCA_003384255_1_3_190	GCA_003384255_1_3_190	-	278690	.	cd06418	BacA is a bacterial lysin from Enterococcus faecalis that degrades bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues.  BacA is homologous to the YbfG and YkuG lysins of Bacillus subtilis. BacA has a C-terminal catalytic glycosyl hydrolase family 25 (GH25) domain and an N-terminal peptidoglycan-binding domain comprised of three alpha helices which is similar to a domain found in matrixins.	MADQMVLKTQQWLNSTYGNKTGFGSVQETGNTGWDTINALIRALQIELGITATANNFGSGTQSRFKSRWPNGITQTSGYDNVHGIIQGALWCKGYRAEYGGITLEFTDHVADSIRQMKVDIGLGDTSATVDVELMMALLSMKQFRLLSAYGGKTAIRQAQQAINRGYKNYTGIIPTDGLYGREMNTALIQVLQAIEGYTTAEATGNFGAGTRSKLRTISSGTNQWVWLATVSLVCNGYSILPTSTWNSEISNTLWQFQQAHALPVTGVVDPTTWMSLLTSKGDPNRPCVACDTRFEITDELAGHLKADGYQIVGRYLSEPNQSSKSEADYFKALRTGELERIVGHGLKYFPIFQEYSTELKYFSVENGHRHAKEAQTAAQRLGVPPTVIYFAVDYDATDPQVTSHILPYFKAVTQSLGGGYRVGIYASRNICTRIAQAGYAVASFVSDMSTGFSGNLGFPIPDNWVFDQFHEISGYRGKWDLDRVAYSGRMSADSSVRHAQPVNYDALDFLDLIEALESRFEELRVVYKDYAFGEDPITSGSYVTWVKVPTWRCVLNYLSTVYLKGSAKWSAAAEAYREADAKRLEDDTQASQIISALNKWIRSDRQEWTDPAGGAVDIPHMSVTTLGYINLNPLVPDKWTGWAGDLASALGPIQKVVDLNPGSNIIAIARALVGQGDNYKNHSGLQGLTIPNDLPNNCNYSDLCSDGDAIKLAAMLKGSGADDPNLLSRTLRSYYNNPVSLLQRFKAISESVGASDGGTAKDKFFAEIDGPLDDRYVGLLTDGSNGAYGYSGVEPSEETKRAACQALAEFIY*	mmseqs_cdd	nonviral_gene	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0021	shell	direct	high	2441	1.0	GCA_003384255.1_02001
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	201179	201655	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	19387	19863	GCA_003384255_1_3_191	GCA_003384255_1_3_191	+	278690	.	.	hypothetical protein	MRFRNLGATWRDVAQISVGVDPRGLPPPVAVERRLAGVARLTQTAEVGLVMGAAVLQRDDVVDFLRRGVPASREAVLAQGVGGDVGGTNLAPAGPITSVDLRVTLPLAVALVLRLGVGFAEAGVGEVRAAGLGTRTGRLDRHHAPLSRTRQSPKAPSR*	.	hypothetical_protein	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0022	shell	direct	moderate	378	0.792	GCA_003384255.1_02002
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	201760	202221	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	19968	20429	GCA_003384255_1_3_192	GCA_003384255_1_3_192	-	278690	.	PFAM:PF05263.10	transcriptional-activator	MHVMTKYLDTRKAAISALQDFAVMEQIIDTTDEQIKTAYDDVTTPASSKLDGMPRHTDLHAGEMRVAATLDRIDIYRARYAQAREYMAWFLPAWQLLTDDDRFVLEAFFLGDGTQDEAVQTVCDHFYVERTSAYQKKSRALARLASALYGQAA*	phrogs_hmm	hypothetical_protein	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0023	shell	direct	high	461	0.998	GCA_003384255.1_02003
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	202212	203588	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	20420	21796	GCA_003384255_1_3_193	GCA_003384255_1_3_193	-	278690	.	PDB:1Z6A_A	Helicase-of-the-snf2-family	MRYRPHNYQQTATRFILDHHEAAILLGMGLGKSVITLTAIWQLLLDYFTVSRVLVVAPLRVARDTWPAQVAKWDHLQGLSVAVAVGTKADRLDALAKSAMVTVINRENIPWLVRQYGDSWPFDMVVIDELSSFKNHRAKRFTALVKMRPHVKRWVGLTGTPASNGLMDIWAQFRLLDGGQRLGRFITRYRDKWFLPDKRNGMQVFTYKPRAGAEEEIYDAIADMTLSMRTTDHLTLPDLTVTTTPVVLGAGERAVYEQLKADLVVDLDGQVVDAANAAALSGKLLQLASGAIYDEHGDTVEVHGAKLDALEDIIEAANGQTVLVAYWYRHDRERIQRRFPQARELKTSADIEAWNRGDIPLGLIHPASAGHGLNLQSGGHLLVWFSLTWSLELYQQTNARLYRQGQAEPVTITHLTATGTLDQAVLKALEAKDMTQAALIDAVATELTTISRKESSCM*	rep_hall_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0024	shell	direct	high	1376	0.999	GCA_003384255.1_02004
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	203569	203847	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	21777	22055	GCA_003384255_1_3_194	GCA_003384255_1_3_194	-	278690	.	PDB:4QBL_E	Nuclease	MNEHHIEAQLKKAVEASGGLCWKLVCPGTTGVPDRLCLMGGQVVFVEVKAPGKKPRPIQRRRMSQLAAHGFTALVVDSVDGIKEVLDALPAA*	common_virus_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0025	shell	direct	high	278	0.996	GCA_003384255.1_02005
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	203982	206240	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	22190	24448	GCA_003384255_1_3_195	GCA_003384255_1_3_195	-	278690	.	PFAM:PF04735.11	dsDNA-helicase	MTPFTLCAATSSGNPHNNHYPNHHHITDQTSLEQVAWLDHVAATYTGDRRSSASFISSDCVVMDIDNDHTDNPDEWITPDDLAELMAGVEFMTATSRNHQKPKRTLSARPRFHVYFPISPVTDADTYAGLKRRLAGRFGFFDPQALDAGRFIYGTTNPETTIHNGTKLLDAWLDEADEIDVFAAFDASTQVIGEGSRNATLSRFAGRVLIRYGQTAQARDLFDRKASLCEPPLSDHELESIWQSACRFAAKVEAQPGYLSPEAYAELTSLRPEDFTDVGQASMLTAEYSSRLAFTEATDWLVYEGGVWSESAPAAQGIAQELTDRQLAEAGHLLEKARDELMVTGANAVLAAASSKAKALGGFTSPQRAAYRAFEDAKAYEAFVLKRRESRAITSCLREAHPMLLTTPARLDADPYLLNTPGGTWDVRDGTRRDHNPLDLITKQTALDPTDTGAEIWNRALNVFFQSDRELIGYVQRIVGLAAIGTVMVEALVIAYGDGRNGKSTFWNTIARVLGTYAGNMSADVLTIGGNRNVKPELAEAKGKQLIIAAESEEGVRLSTSTVKQLAFTDQIYAEKKYKAPFAFTPSHTLILYTNHLPRVGAMDAGIWRRLIVIPFNAVIESSSDVKNYADHLYETAGGAVLAWIMEGSRLIHAEDYQLAPPAQVVAASSAYREENNWFAQFLDARCEVDPSLSERAGDLYQEYRAWAQSTSGWARPMADFNATLEQSGFERRKSKHGMYVYGLALTSEFNS*	rep_hall_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0026	shell	direct	high	2258	1.0	GCA_003384255.1_02006
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	206237	206674	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	24445	24882	GCA_003384255_1_3_196	GCA_003384255_1_3_196	-	278690	.	PFAM:PF09152.9	nucleoside-2-deoxyribosyltransferase	MTATIDVGIPLRNADGYPDPTCYQALKEIQLAEYGYRPLVYICSPYSGDIAANVELARRFCAFAVKARQIPLAPHLHYPQFMDDTDPDARELAMFFNRILLSKCEQLWAYIGRVSPGMRAEIDWAHQMDIPIRFFDADFQEVHPA*	phrogs_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0027	shell	direct	high	437	0.998	GCA_003384255.1_02007
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	206674	207435	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	24882	25643	GCA_003384255_1_3_197	GCA_003384255_1_3_197	-	278690	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MATGLQVFTNHEFGTIRTITSSGQILFCGKDVATALGYANTKDALARHCKGVVNHYPLETAGGVQQVRFISEGDLYRLIVTSKLPAAQKFETWVFDEVLPTIRRHGIYAIDELLADDEFLERAITTLRAERAKRLAAEQALLEAAPKVSYYDIVLASPSLITATEIAKDYGLSAKKLNQILREEQVQFHQSGRWFLYAKFAEQGYTQSKTHEYDEGKTRTHMYWTQKGRLFIYDLLKNTRGLLPVIEREGQGA*	common_virus_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0028	shell	direct	high	761	0.999	GCA_003384255.1_02008
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	207752	208669	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	25960	26877	GCA_003384255_1_3_198	GCA_003384255_1_3_198	+	278690	.	COG4823	Abortive infection bacteriophage resistance protein  [Defense mechanisms]. 	MEQVKQFKTYGEQVELLRQRGMRVNDPQHAETLLARLNYYRLSGYWYPMRRFSQGDGTARDEFVEGASFDLVVALYGFDEQLRHSVFIELDRVELAIRTKLGHELGRLDPLIYLDPKRLSARARQRNKDGRSVHEVWLRKYQSALKASKEDFVAHHKSKYGGTLPIWAAVEIMDWGMLSYLYGMSPNIVRKRIAEPCGLTGPQLESWLKSLNILRNYAAHHARMFNRVYDIKPKLNNGVRLAPVAEGMNRVFGQLSLIQYLHRQLDLSPADRLPKLFHTYPHNPIVPFSRTGAPDNWRELPLWCV*	mmseqs_cdd	nonviral_gene	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0029	shell	direct	high	917	0.999	GCA_003384255.1_02009
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	208666	210282	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	26874	28490	GCA_003384255_1_3_199	GCA_003384255_1_3_199	-	278690	.	CDD:cd08642	DNA-Polymerase-I	MSLDAVGAALDLDVQKDTAGKRLIKQFCTPATPSVLNGGGTRNLPSSDPTSWAQFIDYNQRDVEVELAIHDRLSSFPIPEAEWDAYALDQRINDTGILLDHTLADAAVALDDQHRAATLARARELTGLENPNSPIQLKEWLTTHGCEMSSLAKADVEAALESATGKVKEVLELRGDLAKSSVKKYQAMHNVTGTDGRARGLIQFYGAGRTGRFAGRLVQVQNLPRNYLPDLDQARTLTRQRNLDALELLYDSVPDTLSQLIRTAFIPSAGCRFIVADYSAIEARVIAWLAGETSTLAAFRDGKDLYCETASRMFGVPVEKHGINAELRQKGKIATLACGYNGSVGALKAMGALRMGLAEHELKPIVDAWRAANPNIVRLWADVEQAALDAITTRQAVRLRNLRFTAESGILFITLPSGRRLAYVKPQLGENRWGGTSITYSGVTTGRKWGRLETYGGKLVENIVQAVARDLLVHAMTLVAQAGHKIVMHVHDEIVIDEPEDSGFTIADACQLMTTPPDWAAGLPLDADGYECDYYRKD*	rep_hall_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0030	shell	direct	high	1616	0.999	GCA_003384255.1_02010
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	210295	210633	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	28503	28841	GCA_003384255_1_3_200	GCA_003384255_1_3_200	-	278690	.	CDD:cd08642	DNA-Polymerase-I	MRQIAIDIETFSPAPLAKTGVYPYAEHPDFRLLIFGYSIDGGPVEVVDLASGGGLPDEVLAALVDPGVVKWAHNAAFERVALSAWLQRHYPELLAAGFLDPSQWRCTMVWSA*	rep_hall_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0031	shell	direct	high	338	0.997	GCA_003384255.1_02011
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	210710	210907	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	28918	29115	GCA_003384255_1_3_201	GCA_003384255_1_3_201	-	278690	.	.	hypothetical protein	MSDCFNAITLAVWVYVLIPFWMVWGYYWIKDKRAKRRERQRIDELIAKEKAELDRMNATYNLDPK*	.	hypothetical_protein	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0032	shell	direct	high	197	0.995	GCA_003384255.1_02012
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	210920	211465	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	29128	29673	GCA_003384255_1_3_202	GCA_003384255_1_3_202	-	278690	.	PDB:1JE5_B	DNA-Helix-Destabilizing-Protein	MSTNNPTRVVTGEVRLSYAHVWEPNSIQGGKPKYSVSLIIPKADTTTITAIEKAIDAAIDAGTAKFGGKRPNKAALKLPLRDGDTERDDEAYANSFFVNANSLTPPQVVDENVSPILDRSEVYSGCYARVSLSFYAFNTNGNKGVACGLGNIQKIRDGEPLGAGRVSAESDFGAPADDFLN*	common_virus_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0033	shell	direct	high	545	0.998	GCA_003384255.1_02013
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	211471	212613	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	29679	30821	GCA_003384255_1_3_203	GCA_003384255_1_3_203	-	278690	.	PFAM:PF12705.6	PD-(D-E)XK-nuclease-superfamily	MPDQHALLSASGAHRWLNCPPSAVLESREPDSTSAAAEQGTVAHALAEWKLRRALNDAPTFKPESGWIDTEMEDLTDDYVAFVQEHISLAREACGDPQVLIEQRLDFSHVVPGGFGTGDCVIIAEPKLQIIDLKYGQGILVEAAHNPQLMLYALGAVHAFGDLYDITDVAVTIYQPRRGNVDTWETSVADLLAWAETEVKPKAELAAAGGGEFCPGSWCQFCRIAPTCRARAEANLALAQHEFAPPAELSGSEIADVLTRIPQLKTWAADVEAYALSQAVNQGKHWDGFKLVAGRSVRKYTEENAVAEAAEAAGYADIYDRRLITLTAMERLMDKKTFNEVLGDLVVKPVGKPTLVSDTDKRPALEIHSAQTEFTKTESR*	common_virus_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0034	shell	direct	high	1142	0.999	GCA_003384255.1_02014
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	212606	213181	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	30814	31389	GCA_003384255_1_3_204	GCA_003384255_1_3_204	-	278690	.	.	hypothetical protein	MPTKLKIKIAKHPSPAAALAAKEIRPSRRMLRAIFGTSRPQHRMAVLLPGSEASTVEVRVADTDDDLMALADAAGVTMLAAAIEETAWEGFEDHAGMPGARPIAAAGLAQPDLEQAAAEYEAAHRQAPEPAPEPEPVSLAQVRGVLAGLSSQGMTEQVRELIVATGADKLSAVDPTKYGWLLAKAKELSDA*	.	hypothetical_protein	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0035	shell	direct	high	575	0.998	GCA_003384255.1_02015
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	213283	213789	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	31491	31997	GCA_003384255_1_3_205	GCA_003384255_1_3_205	-	278690	.	PFAM:PF07638.10	RNA-polymerase-sigma-factor	MAFNRQFTVPYLTPRGNTIDLPVPDLPDSEELRAQLRDPASRPKWARAYLDDVYAEYRELDNRRRSDISVDQPGHGDDDERGGLGADYFASDDPDFTEQVEANLAVVELLSPLTATQREYIELHVLHGDRFTEIAADKTGAGQPTSADAVRKAVSRGLAQLRKTLTES*	phrogs_hmm	hypothetical_protein	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0036	shell	direct	high	506	0.998	GCA_003384255.1_02016
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	214071	214214	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	32279	32422	GCA_003384255_1_3_206	GCA_003384255_1_3_206	-	278690	.	.	hypothetical protein	MDTRNTKQTSRPVAKKASALLRDGRTSAKTKSVAASALAQAKPRKGK*	.	hypothetical_protein	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0037	shell	direct	high	143	0.993	GCA_003384255.1_02017
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	214418	215383	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	32626	33591	GCA_003384255_1_3_207	GCA_003384255_1_3_207	+	278690	.	pfam20282	hypothetical protein	MDYKSSFHAVLATVRPLMKGTRNLGEFTAGLIDMGLVPRGTVYGEKTALEMRKSATWKGYANGSDQLPTVLASELAGRWDQFRFASNVSQAYEESALNDLADRLHDLDESINKGNVTEGLGQLFYKVFTEAAGETAAVTEPLTLADKADRSGIPYIDEKTNRLRLGDRSVALPPKHPTPDTVQPAELGYVSALLAAHCEDKARTGVEVQLDDIPSRLVQHFQEQRKAFYRAEWVRETSWNCIHDGRPLFDEFLETMHAGVSDTNLRQYPNGLERLLATLAQAAAVQLDGVRLDQIIDLIDVWSRKGSCHELVARNRLGWVD*	mmseqs_cdd	nonviral_gene	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0038	shell	direct	high	965	0.999	GCA_003384255.1_02018
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	215383	215829	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	33591	34037	GCA_003384255_1_3_208	GCA_003384255_1_3_208	+	278690	.	.	hypothetical protein	MRATSLDTSFEAELRGLILLFLLGDAADADYLGALDTITVNAHTFGVGAENLNGTHRLASGELHTRTVLMTQALQHLAIQGFVTLQPDRSPAAFTITAEGESVVNHFRSRYAGQLFDTALETIERVGDLSTSELAQIIRSATPEGETR*	.	hypothetical_protein	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0039	shell	direct	high	446	0.998	GCA_003384255.1_02019
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	215826	217700	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	34034	35908	GCA_003384255_1_3_209	GCA_003384255_1_3_209	+	278690	.	PDB:4UX3_A	Chromosome-Mainenance-protein	MTPGFWISSITVAGHPTRRDSSVGFESGLNVIYGPSNSGKSWVLQCIDYVFGLKADEFVLDENSGYTEVRMGVRTAQGSLTLSRPIGEGANNIEVSSTDPRIESGTYKRQSSGRSPLLSSVWLKLIGYDAPENLKIIKNQNLETQALTWRTFWHALYADEDRISTKKPILLPLQTTAQPAFKCALASLITGKDYAAYARDESVETRKLRNNAIIDYLEPLPKQLEERIELIDKALGSSDPAEIQQRIDELIAELERVQQRITHATVQGQDVIARLQQVRDSLAESRSLRNRYEELAASYRARIERFDFVEEGHALTAHREPATTCPVCTQALPPEARSAVPEPDLRERHDLAARLNDLRQTIHQMDLEQAPLQEQEQDLAAEAERIARRISGELEPQLQALSTSLASHNAIIAMQAEREQHLERKQAIEDELEERKNRTFPKGNFNPLDEYPKTFWPQMGTNLLDILGACAFPRLKDARFSRELFDAVINGKTKAEEGQGYRSFVNTAVMLALREYLASEDATHNPGLLIIDTPLLGLDDPQLDPELQEARETIPAALYDYLALEQDGGQMIIADNTKFMPDIEPLKDRCKLIVFTKREGEGRYGFLLDAQDEDLIDLEETDDN*	common_virus_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0040	shell	direct	high	1874	0.999	GCA_003384255.1_02020
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	217690	217926	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	35898	36134	GCA_003384255_1_3_210	GCA_003384255_1_3_210	+	278690	.	COG3655	DNA-binding transcriptional regulator, XRE family  [Transcription]. 	MTTNRAFSYKPLWKLLIDRDMNKIQLQERAGISPATLSKLGRGGNVTTDVLARICEALDCDIADICEVVPTDLKGETD*	mmseqs_cdd	nonviral_gene	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0041	shell	direct	high	236	0.996	GCA_003384255.1_02021
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	217927	219780	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	36135	37988	GCA_003384255_1_3_211	GCA_003384255_1_3_211	+	278690	.	PDB:1G60_B	Adenine-specific-DNA-methyltransferase	MTAQRLQLTWYNKDKALIPTETGKYGYTWVDPSDPRYCETHTLVLDDYVQGSQTPKSDEFAYSERADLEPQDDNLLILGESGDVLEALTRVPELAEKYVGKVKLIYIDPPFNTAQTFASYEDNLEHSIWLTMMRDRLHHMKKLLADDGSIWVHLDDVEVHRMRVLMDEVFGADRFVAEMQWQKTYSPENRSVISHSNDTILVYCLNQERFKAVRNLLPRSDAQNLVYQNPDDDPRGRWRPSDFTAQFNPAENERESQRYTLTTLAGLSFDPPSGRCWLYTKDRYLELLEDNRVWFGASGQGAPQLKRFLSEVMQGRVPTTWWPHEEVGHSQEGKKEILSLFPGQQPFSTPKPERLLERVITIGSNPGDIVLDVFAGSGTTAAVAQKMGRRWVTCELLESTFTTFTRPRLEKVLNDQDPGGITRTKGERVDATEDGLPDGVSPEDAAKFTSVLNKLIKDDPELKKSVEVKTLKAASKTRRTKEVLNWRGGGGFQVAHLSPACFDYAPELDRVMLTAAATGQTLIESVAANLGFTLLHPDDDYVFDARRGNALLKVVEGVATTEIVDWLASQIQPGETIVLAATTVMDGVRQHLRKLVKGSRVVALPDDMFRYSEGGDQ*	common_virus_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0042	shell	direct	high	1853	0.999	GCA_003384255.1_02022
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	219780	222368	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	37988	40576	GCA_003384255_1_3_212	GCA_003384255_1_3_212	+	278690	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MANRLNISFDSDMLESISAEFDLRAPNKEALRQLVFTLDGDYDPTVMQVLNLATGVGKTYLMAAFVEYLRRQGVGNVVIVTPGKTVQAKTVQNFTPGTPRYITGAAVPPEVVTPQDYSAWIARQNGPARLAFGREVPMLAFIFNIQQLIAPKEAEGDTHGGTQDAMRRKPRRFDENAGVLFDYLKNLDDLVVIADESHLYGSSAVAFNAALKELDPAAAIGLTASVDKATDHVIFEYPLYRAIQDKYVKAPVLAFRKTGYGTDEASEEQQLRDALQLRALKQAYYDSYAASQNRDHVNAVAFVVCSDVEHATQVAELLRTPESLGRDEAVLQVDSKHEDELTQRRLDELDRPESPVLAVVSVNKLKEGWDVKNIAVVVTLRAMASEVLTQQTMGRGLRLPFGRYTGVWQIDQLDIIAHQSFTELLNAENVLQQFGLDEAIAEPDKAKVEEAIRKAAEESGTGTGTPTTGGDQPTTTTGSEPGTGVSGEVAGGVAPQPGTVPVGGSDSPGAGLPGVGVRTITEQEDQPTWELVSIGRNPSFADVSYRFPVTTMTVQQPPIDLSEISDAEIEQAARRVTSAGNVLLRKEIIAALGKKLRAEDRESAEVDSVHVDDADAEEALVKLVINMSLVPKTEQTARYVATFLVPKFMRTVTFTGWTVKSLDSARAELLALIKNYTTETLRATREVPTIHPKSMPGTGYTLPLGEKVHDQIESRDQFVRGRVYGGWFKSLFAEESFDSFTGEYQLARLLNTSPGIVWWHRLHPQDQAFVYYNAKDRYFPDFVALDTNGVHWIIEGKDERGRDDARVQAKRKAAEALVRRLVAEDAYAGQHWGYLIAYEQDTARADSWEDLKAFASPVSNAL*	common_virus_hmm	common_virus	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0043	shell	direct	high	2588	1.0	GCA_003384255.1_02023
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	222352	223050	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	40560	41258	GCA_003384255_1_3_213	GCA_003384255_1_3_213	-	278690	.	PFAM:PF00239.20	integrase	MQYPELATVQARLTYRLTSFLLENLAAGYTVEWMDAFHAQRHAAEALGIADRELPWLGTRVDPRGYKSFGKRLSRKIVCGDCGRPFGHKTWHSGTPNRVDVWECPTNYVKRGTCTTSHLYQEVLLVKMAEALQVLAGRNSTAVDQAVDSLQSTGARRRPSTLHTAIDKLLTESPTQLALHIPDFLAMLEGGCMLTDGRLGFVFITGEAVTLDLPQRWSPVMRPGELAATGRC*	phrogs_hmm	hypothetical_protein	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0044	shell	direct	high	698	0.999	GCA_003384255.1_02024
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	223178	223714	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	41386	41922	GCA_003384255_1_3_214	GCA_003384255_1_3_214	+	278690	.	COG1002	Type II restriction/modification system, DNA methylase subunit YeeA  [Defense mechanisms]. 	MVHAAPQRLSDKPATGADPSEYAARRSTLRRVLPSGERVSPHLRHPRTTNPCIHFDTVCEPALGSGAFTIEATRQLAEQYPTRRQAELGRRIDPEDYPAQLQRTKAYIALHNVYGVDLNATAVEFAEIILWLDTMASGLDAPWFGLHLRRGNSLIGTRHAVYTRDQLTSKAWPDHPAN*	mmseqs_cdd	nonviral_gene	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0045	shell	direct	high	536	0.998	GCA_003384255.1_02025
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	CDS	223854	226307	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	42062	44515	GCA_003384255_1_3_215	GCA_003384255_1_3_215	+	278690	.	.	hypothetical protein	MPQRVKDVKDWRKRFRRRPGRHDVTTLVELGHQVEDLWTMALRRLTVAEQQTSRDIALWGRDEAPSHRQVVTREQVEQSLADPDGAYQRLRLVMDAWCALWFWPLTTRVAPPSWAEWIDACTMLLGGRLSRADRRRDAPMLGSAQIWEALAAQEDLALASAGAATVAQTLDKHPWLQVCRQVAREQGFFHWQLDFAPVFARGGFDLQVGNPPWVRPILDMDALLAEGDPWWQLAGKSPEDVREQRRTVTLALPGLADSVCRGITDVSGTGSFVGHATNYPMLQGLQPDLYRCFMCQTWAHTSSRGTIGLVHPETHFTDEKAGHLREETYPRLRRHWQFVNELKLFDEVHDLVTYGVHVYGSPAQPHFLQASALYHPDTVVGSLRHDGSGGAPGFKVDGHWDQRPHAQRIETVTDETLATWRDILDPNLEAPRRTRMLYTVNRDVAETLQQLSKAPRLGSLSLRFSPGWHEKNDRTKGYFIQQWGTPDSWNDVILQGPHLHVATPFYKSPNPTMKHNQDWSVVDLETLPPDAIPVTSYKPAGDRAWYDADYTHWDGDPARDHYRLAWRAMAANTGERTLIPAIIPPGTAHPNGVFCVGGADNRILTACAGFASSLLLDFSVRAAPKSGIYQAVFDRLPAPCQRHPLLPALLLRTLRLNCLTDAYADLWAECFDPSFTSDSWTIPDRATTPLGDVGPTWTSQTPLRRAVDRRQALVEIDALVALMLGITADQLCTVYRTQFAVLYGYDHDQYFYDAHGRLVPNQVLKVRRKKGEAITEAERTATTYRYDLPFHTYDRELDMHIAYVEFERRLETRGTDS*	.	hypothetical_protein	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_CDS_0046	shell	direct	high	2454	1.0	GCA_003384255.1_02026
GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote	cenote	tRNA	186458	186531	GCA_003384255.1	NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255.1_NXAW01000003.1	GCA_003384255.1|NXAW01000003.1	GCA_003384255_1_3	GCA_003384255_1_3@C11	4666	4739	tRNA-Gly	tRNA-Gly	-	278690	.	tRNAscan-SE score: 73.3	Gly	NA	tRNAscan-SE	.	C11	44515	181793	226308	GCA_003384255.1|NXAW01000003.1@region_181794_226308@tool_cenote_tRNA_0001	.	.	.	.	.	.