core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	645960	646421	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	1	462	GCA_003425605_1_1_620	GCA_003425605_1_1_620	+	1858630	.	PRK10802	peptidoglycan-associated lipoprotein Pal. 	MNKFVKSLLVAGSVAALAACSSSNNDAAGNGAAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVSYGEEKPAVLGHDEAAYSKNRRAVLAY*	mmseqs_cdd	nonviral_gene	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0001	persistent	direct	high	461	0.998	GCA_003425605.1_00654
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	646855	647880	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	896	1921	GCA_003425605_1_1_621	GCA_003425605_1_1_621	-	1858630	.	PDB:1Z19_B	Integrase	MPIRKNKNGVWQIDFTTPSGERVRCSSKTTDKKLAQHLHDKLKHEAWQVEQLNKKPEKTVEQALILLLKDAEHKKDKLTKIQHAKYWRDEIGNKLLSSLTSEDIQNAIPTHVVRTGKILSPATQNRYRSSIMRAINLAKQAGWIDVVPYIAKNSEPKKRIRWITEKEAERLLDSLNLNWMKDVCQFALLTGARMTEILSMTWDKINFANKMAIVTGDIAKSGRGRSLPLSDDAINLIKERMKYQVSPYVFHSGTGKLRDDISRRDFKRALQRANIKNFRFHDLRHTWASWHIQRGTPLMVLKELGGWETIEMVQKYAHLNADHLLSYVNQVKFSSNTRLAR*	common_virus_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0002	shell	direct	high	1025	0.999	GCA_003425605.1_00657
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	648219	648506	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	2260	2547	GCA_003425605_1_1_622	GCA_003425605_1_1_622	-	1858630	.	.	hypothetical protein	MAKYLYRYALESNNPTNNDDGNTWEDESRCFDNVALHIAKENAYSWDMFEEPEREVMYVWRDGDFENRLRFLAKFEVIQRLDVIELEEDDDPNDF*	.	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0003	shell	direct	high	287	0.997	GCA_003425605.1_00658
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	648510	648779	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	2551	2820	GCA_003425605_1_1_623	GCA_003425605_1_1_623	-	1858630	.	.	hypothetical protein	MSENNGWINCANELPEPFSTDLEYRNATNKHLIYFTEDGDHWAVGLGWYLYDDKSDCEGCLIPYWESDENPGEEVEVIYWQPLPQPPEE*	.	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0004	shell	direct	high	269	0.996	GCA_003425605.1_00659
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	648884	649054	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	2925	3095	GCA_003425605_1_1_624	GCA_003425605_1_1_624	-	1858630	.	.	hypothetical protein	MSNEITQKVRITIEVEMDDYQRDQLKISKNTQVLGGNIVLLDWEGGVFDEVDGYCI*	.	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0005	shell	direct	high	170	0.994	GCA_003425605.1_00660
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	649044	649577	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	3085	3618	GCA_003425605_1_1_625	GCA_003425605_1_1_625	-	1858630	.	.	hypothetical protein	MFGAVVRDENEIGEDMKVLDEHILEYIWDETLDRIAQHTLVTYIGGSVGTYSDDHAEKRAEDFAILSVRHLIEGSGLSESQFRRRVKKLMAQGVLLQRIGPNSFVINSDVVKDAAVHAARCWRAIGVPYGMDDTGRACKTLPINALPRSIFELKTNCYRILRSEYPSYKGKGVGNEQ*	.	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0006	shell	direct	high	533	0.998	GCA_003425605.1_00661
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	649649	650065	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	3690	4106	GCA_003425605_1_1_626	GCA_003425605_1_1_626	-	1858630	.	.	hypothetical protein	MDIINLIKQQTPEERQTLFNEFIKLLNQKREYVDIPERIVCSACQVFVDERDGTNEDGGEIIHEVYGLRHYDPFMRKQIKELEKQYKYALLDWEQGFLTNKGRFVGRKEAMEIAKAQNQVIRLSGSPNSDILFSEDLY*	.	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0007	shell	direct	high	416	0.998	GCA_003425605.1_00662
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	650069	650722	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	4110	4763	GCA_003425605_1_1_627	GCA_003425605_1_1_627	-	1858630	.	.	hypothetical protein	MKEFNLDAALNGEPVKLRNGLKAIVYYRIPDEFSYPGGSTEIYPLLGIIFNKDGTIKGASENWKDCGAYCSCQGGLDIVGMWEEHKLTSEQVLEKAYKENFLVLCDGNPDLPLKVIAKTKNGEFVMQPEDGIIQPWLANLTMEWFFVKKLDPKFDTSTLPKPFKPHIGDEFFYLSDGVIRYFSFYADCAANLMINGQCFRTKEDAQKWLDFMKSMME*	.	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0008	shell	direct	high	653	0.998	GCA_003425605.1_00663
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	650773	651936	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	4814	5977	GCA_003425605_1_1_628	GCA_003425605_1_1_628	-	1858630	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MFTYGSICSGIEAVSVAWKGLSKPLWFSEIEPFPCAVLAYHYPNIPNLGDMTTLPEKILNREIPAPDVLVGGTPCQAFSVAGLRNSLDDDRGNLTLTLIHILEAIDYVRYQDGKQPCVLLWENVPGVLSTKDNAFGHFLAGLVQERQPLQPTGRKWTNAGLLHSARTVAWRTLNAQYFGLAQRRKRVFLVASARERSVAQILFERKSLQGYSQSCGKTQQGFTCYAEGSFGTYRQSVLGGLVKASGGALGGGSETIVVHGTQDPIISTSTAHCLGRNNGQENVLFDISDRRDVVRIQKDGTTPTLTARMGTGGNNIPCMSINQNIRKLTPSECEKLQGFPPGYTQISYRNKPAEDCPDSPRYKAIGNSMAVPVIKWIGERMINYLNK*	common_virus_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0009	shell	direct	high	1163	0.999	GCA_003425605.1_00664
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	651944	652303	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	5985	6344	GCA_003425605_1_1_629	GCA_003425605_1_1_629	-	1858630	.	.	hypothetical protein	MNEINIKLPLHKFQNLMISHVRYSLPRHTYIVSETIHDVKTYWSVLSSNTREVITRDINEHLKRWASDRNNAFHKLDYDSWEELFDWINESRSSTSTTVTTAKPLVPVLPVINPKQRKK*	.	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0010	shell	direct	high	359	0.997	GCA_003425605.1_00665
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	652300	652545	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	6341	6586	GCA_003425605_1_1_630	GCA_003425605_1_1_630	-	1858630	.	.	hypothetical protein	MRLLKRLAEKVLIDDLRRLDKHIDKSIELHELKLRKLGELIKSLEAENNQLKRENATLETELRAIKQERIFSKRKKKSKRK*	.	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0011	shell	direct	high	245	0.996	GCA_003425605.1_00666
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	652542	653438	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	6583	7479	GCA_003425605_1_1_631	GCA_003425605_1_1_631	-	1858630	.	PRK00321	recombination associated protein; Reviewed	MYWFRNAIIYQLTKQIDFENIEKQLKECEFTPCGSADVSHFGWSAPLVTSENLAHQANGKILLVAKREEKILPVEVVNRELNKRITALEEKEQRKLKKVERSSLKDDVIATLLPQAFSRIKTTALYIDTLKQLIFVDTASSKTAEDVLALLRKSLGSLPVVPLAFNCAPCEVMTRWVTDTAPDWLILRKEVEIREKEDLGVIHCKQKDIEDEEIIDLVQNGLISKLALEWENNLKFILVEDGTLKRLKFDDNITEQNDDIVKEDVTARFDVDFVLMASVLGKTVDSLIKEFGGIRDRL*	mmseqs_cdd	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0012	shell	direct	high	896	0.999	GCA_003425605.1_00667
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	653563	654882	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	7604	8923	GCA_003425605_1_1_632	GCA_003425605_1_1_632	-	1858630	.	PFAM:PF13884.5	tail-fiber-protein	MAEENKEIIAYKGFKQDWTCRGYQYEVGKTYEHKGNVKACESGFHACEYPLDVLSYYSPAVSKFAVVKMSGETSKDSDDTKIASAKITIETEINLPEMIKKAVEWIKGKVDWDAAKVSNTGDQSAATNTGYRSVATNTGYRSVATNTGDQSAATNTGYWSAATNTGDRSAATNTGYWSAATNTGYRSAATNTGYWSAATNTGDQSAATNTGYWSAATNTGYRSAATNTGYWSAATNTGDRSAATNTGYWSAATNTGYRSAATNTGYWSAATNTGDQSAATNTGYWSAATNTGYRSAATNTGYWSAATNTGYQSAATNTGYRSVATNTGDQSAATNTGDQSVATNTGDQSAATNTGDQSAATNAGDQSVAEVSGKQSIAVALGWQSKAKASINGAIVCVYRNHDGELIHIKASKVGENNIKADTWYTLDEIGEFVEVKDD*	phrogs_hmm	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0013	shell	direct	high	1319	0.999	GCA_003425605.1_00668
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	654944	655378	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	8985	9419	GCA_003425605_1_1_633	GCA_003425605_1_1_633	-	1858630	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MARNTNTVILVGHLGSDPEIRQFQNGGQIATFNLAIGDDYRDKQGNTVKRTHWIPIVVHGNSADVARQYLQKGSKICVTGKLVQESWQDQNGNNRTALKVATQSFEMLDSKANNETQQPTKDKEKPDPLNAAAEQDGFNDDVPF*	common_virus_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0014	shell	direct	high	434	0.998	GCA_003425605.1_00669
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	655378	656028	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	9419	10069	GCA_003425605_1_1_634	GCA_003425605_1_1_634	-	1858630	.	PDB:3SZ4_A	Exonuclease	MEMYQLKAKCSGLADLMVKPKSGNGISATAKSAVRKIVKYDLFGYQDFEGNKYTEKGIALEEQAIKLSGRKRGLPLKKNTERRENDWITGECDIYVPSRKLIIDTKCSWDIGSHPFFADEAEEKAKKAGYDAQMQGYMWLWDCSEAQIDFVLLPTPYEQLSSYDDPNRYIDLVEQIPQEKRITTVTIKRDEKIIEKIKERVEIAQEYYQQLIQEMR*	common_virus_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0015	shell	direct	high	650	0.998	GCA_003425605.1_00670
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	656003	656950	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	10044	10991	GCA_003425605_1_1_635	GCA_003425605_1_1_635	-	1858630	.	.	hypothetical protein	MVEIANIFSTEIKENEQHNGMIDTQSARESQEVQAMMVIAKRFPRDPIDAMDRILKSCTRKTLAQSAVYSYPRGGQSVEGPSIRLAETLAQEWGNIQFGIRELSQSNGESTVEAFAWDIQTNTRQVKVFQVPHVRYTKKGKQILTDPRDIYEVVANNGSRRLRACILGVIPGDVIEAAVKQCSVTLKANEDVSPEGLKKMAGIFFDNFGVTQDMIGKRYQCKFESLRPAQVVQLRTIYQSLRDGMSHPKDWFDFEPEKPIINSSVDSNTFERCKQSIANGETTLQELCDSGAYEFSQEQIAELEAIENGNVPTQS*	.	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0016	shell	direct	high	947	0.999	GCA_003425605.1_00671
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	656963	657256	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	11004	11297	GCA_003425605_1_1_636	GCA_003425605_1_1_636	-	1858630	.	.	hypothetical protein	MKPYADHYAQLDAAHQRKVDWQAGYEIALDEVATEIDNDLKQGDQTHYHELTEMLCDNDNFWLAIGSGASYEPYRQEAIKKIAERELHARMNDYDPD*	.	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0017	shell	direct	high	293	0.997	GCA_003425605.1_00672
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	657253	657597	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	11294	11638	GCA_003425605_1_1_637	GCA_003425605_1_1_637	-	1858630	.	.	hypothetical protein	MKHSKTPLRQEKQSFTHFMKGSEKWLNRICYFLAALIIAMIVGGISLHANAHPTDWHDNELSQQIQQETRCELKGGIYENGVCLPPNLTLAAEKELQDYTAQKQAEINRTWSKQ*	.	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0018	shell	direct	high	344	0.997	GCA_003425605.1_00673
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	657611	658348	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	11652	12389	GCA_003425605_1_1_638	GCA_003425605_1_1_638	-	1858630	.	PDB:5HFJ_C	Adenine-specific-DNA-methyltransferase	MKTELFNDHFQNYKRYHIPKAQLVIADIPYNLGNNAYASNPEWYVNGDNKNGESDKANSSFFDTDKDFRIAEFMHFCSKMLIKEPKERGKAPCMIVFCAFQQISMVIDYAKQHGFKNHIPLVFIKSSSPQVLKANMKVVGATEYALILYRDKLPKFNNNGKMIKNWFEWEKDNRKEIPKLHPTQKPIAVLKRLIEIFTDEGDVVIDPVAGSASTLRAARELNRPSYGFEIKKDSCKIAKEKMLNI*	common_virus_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0019	shell	direct	high	737	0.999	GCA_003425605.1_00674
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	658439	659470	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	12480	13511	GCA_003425605_1_1_639	GCA_003425605_1_1_639	-	1858630	.	pfam10548	P22AR C-terminal domain. This domain was identified by Iyer and colleagues. It is found associated with pfam10547.	MTSNAERFKFTDEHIAFIRLHWDKKPSDLIKLFQQQFDLLINRNVFYKLKKKHNIPSLKHANRYSKEELAFIKANCTLNERILAQKMEVYFNKPFNPHALKVLRVKRQWLTGRSGRFEKGENLKPIGFERYCKNAKCWLIKASIKRYERKSHYLWRKAGRKIPRGHIIDYKDGNSRNCTLENLELISRVEMAWRKKLQYHQLNDEIKPTFSAFVKLKEGINQRKKEKDMEENQSPNIATQEPTTFTFEFTEHELQTMAWAWFALLRGTELCQVLHPALKQIGSHYAASVYDIAYEYRSTLRHAHNVLTRITEQFECEQGNNWRVLKYLRAYDPKKTGFQLEIL*	mmseqs_cdd	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0020	shell	direct	high	1031	0.999	GCA_003425605.1_00675
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	659460	659711	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	13501	13752	GCA_003425605_1_1_640	GCA_003425605_1_1_640	-	1858630	.	.	hypothetical protein	MKNKITDLNNHLFSQLEKLLDEDLTDEELNREIKRANAVSGIAANIIASNAISLKAMTLFENRQIERESPDFLRISKAQGDDL*	.	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0021	shell	direct	high	251	0.996	GCA_003425605.1_00676
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	659843	660118	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	13884	14159	GCA_003425605_1_1_641	GCA_003425605_1_1_641	-	1858630	.	.	hypothetical protein	MWIFQNTFASTETQRHVKPLRMIDEVCFEMVTIKQTRLKMEEKQENSLSDNDKELIKQAVLESAAKNTNFPPDKLAKSICDAIYLIDSYKH*	.	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0022	shell	direct	moderate	159	0.576	GCA_003425605.1_00677
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	660328	660549	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	14369	14590	GCA_003425605_1_1_642	GCA_003425605_1_1_642	-	1858630	.	.	hypothetical protein	MQDEMKRYAISYYFDGKRWATDVYAHSFEEAEEKLKAMSQGTVDGEIHLSVYIPENPLSKVSRLITRIAKKFM*	.	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0023	shell	direct	high	221	0.995	GCA_003425605.1_00678
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	660564	660734	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	14605	14775	GCA_003425605_1_1_643	GCA_003425605_1_1_643	+	1858630	.	COG3422	Uncharacterized conserved protein YegP, UPF0339 family [Function unknown]. 	MYFQIFKGVNNQWYWRLKAANHEIIAVSEGYTTKQNCLHCIHLVMDTNRNTPIYES*	mmseqs_cdd	nonviral_gene	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0024	shell	direct	high	170	0.994	GCA_003425605.1_00679
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	661095	661262	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	15136	15303	GCA_003425605_1_1_644	GCA_003425605_1_1_644	+	1858630	.	.	hypothetical protein	MKEKFKLWLISLNCELINDLGIDEIVSRVDDRLEVVIANKEERVVLEDLIKCFNS*	.	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0025	shell	direct	high	167	0.994	GCA_003425605.1_00680
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	661290	662210	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	15331	16251	GCA_003425605_1_1_645	GCA_003425605_1_1_645	-	1858630	.	pfam12686	Protein of unknown function (DUF3800). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 215 and 302 amino acids in length. There is a DE motif at the N-terminus and a QXXD motif at the C-terminus that may be functionally important.	MLCLLLIPGPDHFRLGFRVFGIKIMSKTYIVYLDEFGHIGPYLSSTHPKHNTHPAFGLGGFVLPINAVRPFSSFFFELKLKLFENFDIKQAKEKARSKGERFQLSTWEKKGSKQYSVINLKKYKQLIVESTSRIINRITSKGGFLFYVGEAKFRNPEQHNPQEVYKSSLTEIIKRLDDEFHSEEAHFLIFMDDSEGSADLVKRSIYEMHQNGRYQLIEAPMQVDSELYQTIQCADWLCAIYGKIAYYQIEPEAKPDYELFVRYFGDKIARAQKRSNVRNNLPKPASKEKLLKLKDKFDNRCCKYSK*	mmseqs_cdd	nonviral_gene	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0026	shell	direct	moderate	849	0.922	GCA_003425605.1_00681
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	662399	663100	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	16440	17141	GCA_003425605_1_1_646	GCA_003425605_1_1_646	-	1858630	.	PDB:2FJR_A	Repressor-protein-CI	MKTLGERVKARRMELGITQKELGDLVGISQNSITKIENGGNTIHIAKLASALGVSVAWLSIGVGDRDDDIVDNSGLDKQLVSSEPDLLHKHRIDYYDVRAAAGLNGFENSDYPEIISSLFLTDEGIAQLVGKKSADGICLVNVPTDSMDPTIRKGDIVFLDTKVNAYCGDGIYAFAIDGALFIKRIQKMIGGGYRMISDNEIYPPEQISDDVCENAKFIGRFIRTIHIEAVNL*	common_virus_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0027	shell	direct	high	701	0.999	GCA_003425605.1_00682
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	663252	663464	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	17293	17505	GCA_003425605_1_1_647	GCA_003425605_1_1_647	+	1858630	.	COG4197	DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily [Transcription]. 	MNKTILKAIKIFKSQQALAAACGVSQNAVSKWLNGGSISLENALKIEKATNGKVKAEMFSKEFSSLLARN*	mmseqs_cdd	nonviral_gene	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0028	shell	direct	high	212	0.995	GCA_003425605.1_00683
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	663538	664245	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	17579	18286	GCA_003425605_1_1_648	GCA_003425605_1_1_648	+	1858630	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MTNLIPISNNHISGNEVKTVNARELHLFLDVSTRFSDWIQRRISEYGFVENQDFVVLLKNEKNPIGGRPSREWFISIDMAKELSMVERNEKGKQARQYFIEMEKVAKNQQKPTALIPQSFSEALMLAAQLQAEKERNAPKVAFVDHYVEVGTSKSFRETAKILKMPERALVNRLVEDKYLYRQSGVLLPYQSAHTKDLFTVKTGTAEHGHNYTQTRVTSKGIEFIASRYASELML*	common_virus_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0029	shell	direct	high	707	0.999	GCA_003425605.1_00684
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	664242	665000	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	18283	19041	GCA_003425605_1_1_649	GCA_003425605_1_1_649	+	1858630	.	pfam13730	Helix-turn-helix domain. 	MSMRLMVQAMNCKVGNPARKLVLLKLADNANDDGICFPSYQYIADKCEMSKRSAISHIDDLIKMGLVTKKARKNKDGSSANLYLLHLEQGSEKSALGGENISLGSEKFALGGSEKFAPITSHSLEPVNEPKKTTQKSESEILLERFGITGQLAKDFITHRKTKRGAISETQLSRLQKQADKAGISICEVVEICIERNWQGFNASWDWRDEKLRPNSPHLGQSHRNKPKFDDTQTGWSAGMNFIVDGTQWQIP*	mmseqs_cdd	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0030	shell	direct	high	758	0.999	GCA_003425605.1_00685
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	664985	665620	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	19026	19661	GCA_003425605_1_1_650	GCA_003425605_1_1_650	+	1858630	.	PFAM:PF06992.10	Replication-protein-P	MANSITQNQINTLPPERTQRAEETINWLFQELKSIFPGWRAAFETEADYLSAKKTWLRVLVREKITRPQLENGICEAEKSLDKFLPSVGLFVYWCKAYDYHALGLPNEAELYQRYNTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKAIPKLLIEAAEKVRSNFPFEDIPKMIPVKPSFYDKAKADKARDSLMAMMKGVLQ*	rep_hall_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0031	shell	direct	high	635	0.998	GCA_003425605.1_00686
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	665617	665841	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	19658	19882	GCA_003425605_1_1_651	GCA_003425605_1_1_651	+	1858630	.	.	hypothetical protein	MTSYKCPKCGAELEDFYTPDYFISSSEWDDDRFRCNGHLIEPIPFPQVSKYSAVNRTKSCGYFGLEDLGVEYKE*	.	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0032	shell	direct	high	224	0.996	GCA_003425605.1_00687
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	665878	666297	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	19919	20338	GCA_003425605_1_1_652	GCA_003425605_1_1_652	+	1858630	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPTDDKKPLVVKIQPITRSLEQNSKLHALLSDISKQCEFNGKKRDIDTWKMIMVSAHKIATGGQAEMVIGLEGEVINLRESTAQMSVKRLASLIEYVQSWGVQNGVRFNDRWGFK*	mmseqs_cdd	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0033	shell	direct	high	419	0.998	GCA_003425605.1_00688
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	666386	666922	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	20427	20963	GCA_003425605_1_1_653	GCA_003425605_1_1_653	+	1858630	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKVCGKAFVKTFSSTQKVCSPECAIKLARDNAQKAQERAEKKKQRERKAKLKSRSEWLKEAQSAFNKFIRLRDKNEPCISCGRYHQGQYHAGHYRSVGACPELRFCELNVHKQCAPCNDHKSGNIIEYRINLVNKIGADKVAWLERQDHEPKKYTIEDCKAMIKYYKAKLRS*	common_virus_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0034	shell	direct	high	536	0.998	GCA_003425605.1_00690
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	666931	667449	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	20972	21490	GCA_003425605_1_1_654	GCA_003425605_1_1_654	+	1858630	.	pfam06530	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	MRKFSELSELTIEQEEFVDRYMYQWGAWVRSGRLDKPQLNIIAKLMQSVIPAEPNEPICDDETGFMISQTIEMFFKKNDQILHFIVFAYYVNKRTINFIAEHLHGKSKAKEMRPCAGKSNVRVPSFRTIYREVEKEIHFAKAIIHELLITCFIIQRTSRERATNIKKIKITY*	mmseqs_cdd	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0035	shell	direct	high	518	0.998	GCA_003425605.1_00691
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	667710	667961	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	21751	22002	GCA_003425605_1_1_655	GCA_003425605_1_1_655	+	1858630	.	PFAM:PF16082.4	holin	MLKDAGSQSIFWSGFGAFWAMYSFQEWLAIMGLVIGLISGLVNMYAKCQEGKVRKNEERRAEEIHRVKMKRLSLGFDDDFDKN*	phrogs_hmm	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0036	shell	direct	high	251	0.996	GCA_003425605.1_00693
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	667942	668484	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	21983	22525	GCA_003425605_1_1_656	GCA_003425605_1_1_656	+	1858630	.	CDD:cd16901	P1-lysozyme	MILTKTRKALGVCSVITVMGLMYAQFGGELRLSPVGAEIIGNAEGCRRDPYQCPADVLTVGIGSTEYGGKKINPKHRYTDLEIAERWKNDIVIAERCVNKYGNGEMLPQSVFDSAVSITFNVGCGAVSKSTMFKYLRAKQYEKACGEFPRWVYASGKKLAGLVVRREKEKALCLADLKLP*	common_virus_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0037	shell	direct	high	542	0.998	GCA_003425605.1_00694
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	668457	668792	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	22498	22833	GCA_003425605_1_1_657	GCA_003425605_1_1_657	+	1858630	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MFSRFETAIKLTALCLILGLCGWTWFQSQKISSLKAENQAQAQTIQQQEDANKALAITLQQERDAVIEQQERNNEIERIATENAESVKTIIKTQPCAHTRLPQSVLDRLYK*	mmseqs_cdd	nonviral_gene	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0038	shell	direct	high	335	0.997	GCA_003425605.1_00695
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	669256	669729	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	23297	23770	GCA_003425605_1_1_658	GCA_003425605_1_1_658	+	1858630	.	pfam07278	Protein of unknown function (DUF1441). This family consists of several hypothetical Enterobacterial proteins of around 160 residues in length. The function of this family is unknown. However, it appears to be distantly related to other HTH families so may act as a transcriptional regulator.	MDNLYDLKLNINQIAELVGMHRQTVSQRLAGLTPAIGSNSKLKLYALSDLIKIGLAEKMTADVDSLSPVERRAFWQAENERLKYERDTGELVPSFEVAQEMGFLAKAVVQSLDTLPDILERDCALTPAQLTRVIQVIDDVKSQMSLHIQAGDNKSEE*	mmseqs_cdd	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0039	shell	direct	high	473	0.998	GCA_003425605.1_00696
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	669732	671855	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	23773	25896	GCA_003425605_1_1_659	GCA_003425605_1_1_659	+	1858630	.	CDD:COG5525	Large-Terminase	MFASAKDIRRDIANLLKPPRRMKVSEAVAEYMRVPVGGGNSVKWDKDTAAYMLDPMDCLNSREYDAVIFVGPARTGKTIGLIDGWITYAIICDPSDFLLVQLTQEKASEHSRKRLDRTFRCSPEIAKRLSPRKNDNNVHDKYFRAGNLLKIGWPSINVLSSSDYKYVALTDYDRWPDDVDGEGDGFSLASKRTTTFMSAGMTLVESSPGKDIVDIKHHPKTTHEAPPTTGILSLYNRGDRRRFYWQCPHCKEWFEPSMANMVGYRDDTDYVKASENARLQCPHCQSLVDPDKKRALNIGGKWLKEGQTIDKDGVIHGEGRNSRIASFWLEGPAAAYQTWAQLTYKLLTAEHEFEMTGSEETLKAVTNTDWGLPYLPRSALEQRRSDELMERREDTEKRTVPYGCRFLLAAVDVQGGRNRRFVVQIVGYGENSERWLIDRYNIKSSMRSNSDGESLPIDPSAYPEDWDLLISDVLNKQYRIEGLDGGVMPILAMAVDSGGEDGVTDNAYKFWRRCKRDGISKQVYLVKGDSTKRQKLISRTYPDNTSRSDRHAKARGDVPLYLLQTDQLKDRISNALSRETIGANYIHFPSWLGEWFFDELTYEERGQDGKWRKPGKGNNEAFDLFCYAHAIAILRGYERIKWGDEDNVPYWAKLPSVNPNVIRKESSAPEEAESAVEIEQVKPKPQPKPKQKNSWLSGGDKKSGGWL*	hallmark_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0040	shell	direct	high	2123	1.0	GCA_003425605.1_00697
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	671852	672088	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	25893	26129	GCA_003425605_1_1_660	GCA_003425605_1_1_660	+	1858630	.	PDB:2L6Q_A	head-to-tail-adaptor	MSRSEQIEQVQLMLEACDKAILDVLAGKTVTFNGRSVTRESLSEIRKTRQTLREELVELKRLGSGRSRFKYANLNPRF*	hallmark_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0041	shell	direct	high	236	0.996	GCA_003425605.1_00698
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	672091	673614	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	26132	27655	GCA_003425605_1_1_661	GCA_003425605_1_1_661	+	1858630	.	CDD:COG5511	Major-Capsid-protein	MNIFEKTIAFFAPAQAAKRAKSRYVLNAYEAAMPNRTHKAKRESQGANVSTKQSAVSLREQARALDQNHDIVIGILDKMEERVIGSRGIHIEPQPMNLNGDVNETLAEQIRKKWAEWSICPEVTGQFTRPELERMLLRTWLRDGEVFIQLVRGSVAGLNHSTKIAFSLEALEPDFVPMNTLDTANLIQGVELDAWRRPKSYRVYMDNPQENNRTYGRVKSVPAENMLHLAFKKRLHQLRGVSMLHGVIIRLADLKDYEESERVAARIAAAFTMYIKKGDAALYGDNEDYSADSPERDFEIAPGAIIDDLKPGEDIGLINSNRPNVNLETFRNGQLRATAAGTRSSYSSIARDYNGTYSSQRQELVESFEGYSVLQDTFVAHISRPIYREWLKMAIVSGEIDVPVDIDPASLYNAVYSGPVMPWIDPTKEAQAWKERIKGGLATESQAVRASGSNPAEVKRRRRVEVEENRKFGLKFDTDLTNTGTTNDKTKNDSVAGGDGNERNKDE*	hallmark_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0042	shell	direct	high	1523	0.999	GCA_003425605.1_00699
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	673586	675592	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	27627	29633	GCA_003425605_1_1_662	GCA_003425605_1_1_662	+	1858630	.	PDB:6WKK_D	Major-Capsid-Protein	MATSATKTNNQSWYSIKAKANDTAEISIYDEIGFWGVSAASFAQDLKDCGNNIKQINLHIHSPGGDVFDGIAIYNLLKNHPAKVTVYIDGLAASMASVIAMAGNEVIMPENAMMMIHKPWGIQGGDAEDMRKYADLLDKVENTLIPAYASKTGKTPEELAEMLSAETWLNGKECVEQGFADKLAEPLVAMASIKSRKLEDFENMPKAMKDMLFKPQGNAGASAPQATPTPAQPAPTEPVNQAPTAPVDNTAQVQAELNKRNADIKAVFAPFGTTHNDLLVECLGDLSITADQAKDKLLAKLGAGTTPSAAVTPYADNGNIVGDSVKQSLLARAGIDKDKVNAKDNAYNAMTLRELARASLVDRGISVSSQNAMSMVGLAFTHSSSDFGQILIDVAHKSLLKGWETAAENFDQFTSRGTLTDFRAAKRVGLGDFGYLPQVGEGEEYTYGTIGDEGASVALATYGQLFSITRQAIINDDMHLLTKIPEKMGQAARATIAKLVFALLTGNAIAQDGKALFDASHKNTLTGAALDVTNIDKAIQMMNGFVNTRGEPLAIEPDFMLLPTSLYTRAKQVLGSASVEGADINSGIINPIRDIVPTVKSARLQVADPKSWYLINKEAIEVSYLDGIDTPYMEQQQGFTVDGVSTKVRIDAGVNVIDYRGIVKVTNK*	hallmark_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0043	shell	direct	high	2006	1.0	GCA_003425605.1_00700
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	675671	675994	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	29712	30035	GCA_003425605_1_1_663	GCA_003425605_1_1_663	+	1858630	.	COG5471	Predicted phage recombinase, RecA/RadA family [Mobilome: prophages, transposons]. 	MAKNYMQDGNTVRFTAAAAVKSGDVVMLENLVAIAVADVEKSAVGVGLTTGVFTVKAKAADDIKQGAIVYWSATDGATTTAGSNKRLGIAWHASGVSMGTVDVKINA*	mmseqs_cdd	nonviral_gene	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0044	shell	direct	high	323	0.997	GCA_003425605.1_00701
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	675975	676286	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	30016	30327	GCA_003425605_1_1_664	GCA_003425605_1_1_664	+	1858630	.	pfam13856	ATP-binding sugar transporter from pro-phage. Members of this short family are putative ATP-binding sugar transporter-like protein.	MSRSTLSPFDDALAQADKVISDVMMSVYVINGKKYKAVLDESPKLMSGNYTDDYLINGTTRTLTLFKASGYKPKLGDIIISSTEEYVVRGFSFEDGKIVLQLE*	mmseqs_cdd	nonviral_gene	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0045	shell	direct	high	311	0.997	GCA_003425605.1_00702
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	676289	676819	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	30330	30860	GCA_003425605_1_1_665	GCA_003425605_1_1_665	+	1858630	.	PFAM:PF06763.10	minor-tail-protein	MAVKIEGMAALQANIQKLANQVAPKAAAKAINKVARSAIKNGTKNVSKEIHVPAKLIRKRTRLSQKATANRPVAKIRVDRRNLPLIRLLENPRRTMRASKGQIRIGKYQIQRGFIQTLANGRKHVMQRQGKERYSIDVVKIPLSRPLTTAFHNELKDYSSQIKVELTRELSDILKK*	hallmark_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0046	shell	direct	high	530	0.998	GCA_003425605.1_00703
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	676828	677238	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	30869	31279	GCA_003425605_1_1_666	GCA_003425605_1_1_666	+	1858630	.	PFAM:PF06141.10	Minor-tail-protein	MLIHKKIRHQVSDMLKSSIKGVENIYSGRPLFIDIDQEKTAIAVFLDEISCEEVDLCHHEYTAALNIAIYLKTALGDDTLDDIADKIKERLSVAISNDELSENISEMTLISYEYEQDTTNRTWFVSNLKYQIKYED*	hallmark_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0047	shell	direct	high	410	0.998	GCA_003425605.1_00704
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	677241	677891	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	31282	31932	GCA_003425605_1_1_667	GCA_003425605_1_1_667	+	1858630	.	PFAM:PF06199.10	major-tail-protein	MPTQTTPFQGTKFYLGTGLTEGKAVTAVTVKPNATITSAGHGAKVGDFIKLTGLGALDGFYPVKSIATDKITLADEVDWSGQDAPTDFSSAKVAVVKWSSNFCAIKQIEGDGDTLGEEDITTMCSEGTETEAGEIEYGSIKLTFFYAPGTAMQADLRKKFYAKETFPWMMILKNGQGSLYGTGFIQTSPNFSGEVKGKFESGVTIKKAKRDYHLPA*	phrogs_hmm	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0048	shell	direct	high	650	0.998	GCA_003425605.1_00705
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	678050	678166	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	32091	32207	GCA_003425605_1_1_668	GCA_003425605_1_1_668	+	1858630	.	.	hypothetical protein	MQYGLWETTLAYLVLGVCFIIAWRLPNIINSIKNKGDK*	.	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0049	shell	direct	high	117	1.0	GCA_003425605.1_00706
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	678166	678573	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	32207	32614	GCA_003425605_1_1_669	GCA_003425605_1_1_669	+	1858630	.	PFAM:PF16462.4	tail-assembly-chaperone	MNLREKLLANKPKITPIIINGENYYIREITVGEMNRVLYGQQQELVHIAESQGIELNFNDEKHLTEQLAKIYDPNRLTRTLAMRLCDQDGKNLFDMDNPDDLTALSKLDKVVFEQLTQAIVEDEPKNSQAEESSK*	phrogs_hmm	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0050	shell	direct	high	407	0.998	GCA_003425605.1_00707
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	678618	678845	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	32659	32886	GCA_003425605_1_1_670	GCA_003425605_1_1_670	+	1858630	.	pfam13227	Protein of unknown function (DUF4035). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 67 and 93 amino acids in length.	MPERHLQEYEIFYQEQPFGLWREDYRTAQVSHLLAMINRDPKSKPPELSDFMPFYQEKMDDEDDDDGVADYLANR*	mmseqs_cdd	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0051	shell	direct	high	227	0.996	GCA_003425605.1_00708
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	678914	679297	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	32955	33338	GCA_003425605_1_1_671	GCA_003425605_1_1_671	+	1858630	.	PFAM:PF15781.4	toxin	MKQEWEVILQDPLLNWLETLAEDDVLKIYAALELLSTEGPQLSRPYADTLQGSKYTNLKELRVQSKLSVFRLFYIFDPVRQAIVLCGGDKKGKKEKLFYKEMIALAEQTYDDYLSELTKEQENEREI*	phrogs_hmm	nonviral_gene	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0052	shell	direct	high	383	0.997	GCA_003425605.1_00709
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	679281	679583	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	33322	33624	GCA_003425605_1_1_672	GCA_003425605_1_1_672	+	1858630	.	pfam13744	Helix-turn-helix domain. Members of this family contains a DNA-binding helix-turn-helix domain.	MSVKFKDLMNNLPAEKQAKVKAMADDMRMELQLYRIREELELSQKQMAEALSISQPSVVALEKRGNDIKLSSVKRYIEAMGGVLNLSVELPTGKTVTFNL*	mmseqs_cdd	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0053	shell	direct	high	302	0.997	GCA_003425605.1_00710
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	679596	679835	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	33637	33876	GCA_003425605_1_1_673	GCA_003425605_1_1_673	+	1858630	.	.	hypothetical protein	MLRDFIQFTAKCFFILLIALGTLFLLFAVDFIYILAFIGVYVAIFATCLVVAIIKENNRIKKLRIVEQDKNRVKYVIIN*	.	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0054	shell	direct	high	239	0.996	GCA_003425605.1_00711
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	679887	683279	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	33928	37320	GCA_003425605_1_1_674	GCA_003425605_1_1_674	+	1858630	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MSSLGSLNILLSLDSIQFNQALDKSSYQTQKFAKQFELNFTKAQAKAKQFSERTTQYLNNIEKAANTINKTTSRTFWAGIVSSGGSYLSSGISDVIKYADSYTELQNRIRLVTNSQTAMVAATESVFDISLKTNQAVGATAQIYQRFAQNADRLNLSQLQVSELTETVAKSVAISGASAGAAEAALMQFGQALGSAELRGDELNSVIEQTPGLADAIAKGLGVTTGELKNLAKAGKLDIHTVIQALVKARDTVDNDFNKRVKTLSMSFTNLETSITKFSGEANSALGVTQKLATGVDFVSDHLQELIIGLGSLTAALAIGHLSKYGLELLKTGYASAKNALAHIAEAKAIATKATAMRTAAQVEMASLNAQFQLAQSEQTRFALRERMKVQSAQIIALAQAEATAKRNLATATNLATMAAKGLQSVMALLGGPAGVIGIAATSLIFFSSQAAQARQWALDTTTANQGLAESYNELSEAALSLKVEKQLEDIEKYYKEIEKAKASAKSKNINGDFDGFTVVNSISDKELEHLQNEIKSIEENASLAEKALVKILAPLAENMLRSGKSLDDVRQKFKLLGIDAVTANNIIATLPKSFSDAANGAKNATDKTLDLKDAIDKLNGKSTTLAQKLEVAKLKQQGQAKSAYVLAGLYELLGKEGAEYNEVLIGIATGTITAANAADKAVGLSVETLNKIIAGKATLEKMFSDETKVTTIETQIKESHKKSGENARDSWLNFYDEIRKKNSSSLGEIELEQARMFQRLEEHNKKGVVSYQEYETAKTAIAERFARQRLELAGKYAPEKLLKANRDNELKSIQELYEKGQLNQSEAVKASTRVQFDYAQQVSQSAVDPLAQLRALYDPQQELINQQTQELAQLQSFNDQKLITEEEFQQRKQQIIEKYRNNQFQEQMGLYATGLNDLGNAFGTLTSIVEQSAGKQSAAYKAMFAISKAFAIAEATVKLSQAIAQALADPTALTPAQKFANMAAVASAGVNLVSQITSVGFATGGYTGDGGKYTPAGIVHKGEYVITKEATARLGRGFLDHLNYGSVRRGFANGGGVGVPRLPTMAYQPKSSGNIAVKVINNGEPMDATVSQQSKNGQLEITVELVRQIAQAEAGTMLQKNMRPGGLLS*	hallmark_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0055	shell	direct	high	3392	1.0	GCA_003425605.1_00712
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	683288	683620	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	37329	37661	GCA_003425605_1_1_675	GCA_003425605_1_1_675	+	1858630	.	PFAM:PF05939.12	minor-tail-protein	MALKTLSWCPQPKYTVEEEPRRKVLNFGDGYQQRMVDGLNPLLRKFNLTYKLNHKSAVEFDRFLTSHGGVTAFFFREYENGDLIKVVCPKWSKTVTKRHTEISCTFEEVV*	hallmark_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0056	shell	direct	high	332	0.997	GCA_003425605.1_00713
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	683757	683870	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	37798	37911	GCA_003425605_1_1_676	GCA_003425605_1_1_676	+	1858630	.	.	hypothetical protein	MSEKDAGIAGKMLASAAIIAAVGFAIGAACFGISFIL*	.	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0057	shell	direct	high	114	1.0	GCA_003425605.1_00714
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	684097	685281	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	38138	39322	GCA_003425605_1_1_677	GCA_003425605_1_1_677	+	1858630	.	PFAM:PF13588.5	endonuclease	MDIKFILEEIKMSDQIFKERILAHSQHVMRVGQHCSTEETTKQALILPFLDILGFSAYDPTKVKAEYAADFVGAKNGERVDYALFCHDVPVMFIEAKSYNEDLSNHSPQLARYFNATPEVAVAAISNGREWRFFTDLKDKNIMDDVPFLRINFESLDETKIFQLSQFCHDKFQPEALRTLAEESIYLSTFTKTISSSLKEVDCEFVRYIASRSNIGRQLNQRFIESITPIVRQAVEKAVSDMVVSGLSKKPIDIEPVEVTEVEYNDEKADVVDPDNCKIVTTYTERQVLEYVTMIIGSDTDLVAKDTESYFGILYQGKSNRWILRYYDNKQRPSIVIPIDLTSEHQKEIIRAGLEISGNQIIIDYPENILRLSGIIRDCFEYCINDENFRKKSQ*	phrogs_hmm	nonviral_gene	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0058	shell	direct	moderate	1151	0.971	GCA_003425605.1_00715
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	685595	686485	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	39636	40526	GCA_003425605_1_1_678	GCA_003425605_1_1_678	+	1858630	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MSNQISTQTISFNHQSLVTFKQNGTHYTAMKPICENIGLDWKSQYSRMKRDNVLNSTMVIITIVAEDGKKREMICLPIEYLNGWLFGIDINRCKPEIRDTLIKYKKECYQALHDYWFNGKAERKTTVDDRTGLRNAVNMLVSKKGLIYSEAYHLIHQRFNVESIEDLTLEQLPQAVEYVHRIVLEGELITTPKKDECFNFEFTEHELQQLVWAWFALLRGTELCQVLHPALKQIGSHYAASVYGVAYEYRSTLRQAHNVLTRITEQFECEQGNNWRVLKYLRAYNPKATGFQLDIL*	common_virus_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0059	shell	direct	high	890	0.999	GCA_003425605.1_00717
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	686901	687419	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	40942	41460	GCA_003425605_1_1_679	GCA_003425605_1_1_679	+	1858630	.	pfam10547	P22_AR N-terminal domain. This domain was identified by Iyer and colleagues.	MQTLTAEFLGKEVTLVDNNGIAYVAMREIVEGIGLAWKPQYKKLTDYSQKFSCYHMTTTGKDGKKYEMLCMPIKKLNGWLFSINPNKVRADLKERLENYQEECFLALWDYWTEGIARRDEVKNKLALWQQKKAEYTQRAGERGKLLQQCKSEKQDLERELLQIKQLDLFVNL*	mmseqs_cdd	nonviral_gene	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0060	shell	direct	high	518	0.998	GCA_003425605.1_00719
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	687463	688113	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	41504	42154	GCA_003425605_1_1_680	GCA_003425605_1_1_680	+	1858630	.	PFAM:PF05100.11	minor-tail-protein-	MSIYGQLQQYASHGWIELFELDLTKFGDIVYRFHDGLNPLGQAIVWQGLEYTPYPVKAEGFAVDGLNPVRPRITFSNLGGAITLVLAKLKGIEGARLTRKRTKIIYLDAVNFENGNLTADPNAHLPDDIFYISQKTSEDHLTVSFELLPATDLEGVKLPRRQIVAQYCTHKYKGQFCGYTGDKATCAKTLADCKAHFGEHSELPFGGFPSAAYMRI*	hallmark_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0061	shell	direct	high	650	0.998	GCA_003425605.1_00720
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	688115	688822	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	42156	42863	GCA_003425605_1_1_681	GCA_003425605_1_1_681	+	1858630	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MKHIDDAIAHAKQSYPHESCGFFVLKNGKLQYVACTNLAAETEDEFLIGIEDYARAEGVGEIRTVVHSHPDESCLPSIADQDAHKMSGLEWCIIGLEGDEVSTHFMPALTEVPDLYGRKFIHGMTDCYGFVRDWYRQELGINLPNYNRIDGWWDNGGNLYVDNFEDAGFYPVKDLKIGDMIVMQINANVPNHAGVYLGDGLISHHLYGRLSSKDVYGQFYRERTTHIMRHKENTP*	mmseqs_cdd	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0062	shell	direct	high	707	0.999	GCA_003425605.1_00721
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	688761	689480	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	42802	43521	GCA_003425605_1_1_682	GCA_003425605_1_1_682	+	1858630	.	PFAM:PF06805.11	tail-assembly-protein-I	MDNSTAKEQRTSCDIRKIRLKGELGKRFGKVHKLAVKTPAEAIRALCVLKRGFKEFLLESEKHGIVYRFLVQREELTTSSDEFQMRYGAQAEFHLIPIIRGSKRGGFFQLIAGAAMIGLAFWNPLGWATIGGTGFLSSAATLPLTIGASLVLGGISQLLVPVPKLSGPQERPENKPSYLFNGAVNTTEQGQPIPLLYGELIVGSAVVSAGLTDKEIPIRTNSTSNNETRGKLKFKRVSG*	hallmark_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0063	shell	direct	high	719	0.999	GCA_003425605.1_00722
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	689484	693134	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	43525	47175	GCA_003425605_1_1_683	GCA_003425605_1_1_683	+	1858630	.	PFAM:PF13550.5	tail-protein	MQIVGRKGGGKGGGGGGRAPVEAPDSLKSCSYAKFIDVISCGEIEGPVNGLNSVYFGDVQLQDEKGKFNFNNVAIEWRPGSVRQAPSEICQTNEVTTDVNTEVKKDKPITRSIIAPEADIVRVTITVPGLSHQNKSNGDINGTKVELKVEYQANGSQWIDAGNIVIEGKTTSSYNREHSFRLTGEAPWNIKVTRLTDDSDSQVLQNKTIFSKITTVFEEKLTYPGVAYVGVQIDAEQFSSIPSRGYHCRGIKLKVPSNYNPETREYSGDWDGTFIVKYSNNPVWIYFDLLTNEEYGAGEYIKEDMLDKWSMYQIAKYCDELVPDGFGGREPRFTCNVYIQTKQEAFKLLRDLTSVFRAMSYWSSGTQMLVQDSPKEPIYQFNNTNVIGGKFSRSGSNIKTRHNVVLVTWNDPKKYFKQSVEYIEDSEAIVKMGYISQTEVVAFGCTSRGQARRLGKWLLYTEQYESEVITFSCGQDGAIPIPGEVIQVSDVHRSGERRGGRVKDGSTTNRIILDAEVEITKESTISIVNEKGELEQRAITQRGKLTEIDVRPVFTSVTENSTWIIASSDIKPEFYRVISIVESDDGSYTITASDYNPSKFEHIENGNELIEYDTTNNTLDTGVKNVVITDEIYRGLGGSIQTKIVVSYEPAKSLTSRYQIEYREGNGNWKQMEPTTLTSVDIPNVKDGVLYQIRIKTSNVLGVWSDNPIQNYEPIGRLRPPHNVSNLRHKAIAQEGAFLIWDLSPDIDLEYYEIKKGDTYESSKSVGKIKANEFNLGFIRAGEHKYWLSAVDSSDVRSESPTAVTFNISGGQVENLVAEIVGDEVLMTWGETKNNSFSTELYEVKKDDDVLALVKSTSFKFKADFNGNKKFTVTAIDLGGNRSESAQAQLIVHRPTPVSISQQVIDNYVMLRWQSAKATLPIVYYELRKGETIENSEFITNIDGLAFPQFETVGGLYKYWIIGVDSAGNRSEPQYTLSNVAQPPDYILKYDYNSSYDGIKNGSDKIDGKLYLPVRRDTWAEHFRSNNLATPKSQINRGFPLYLQPIDESGYYEEEMDYGTVLASSKITLTPKVISSGSYDINYHIAVKENAKDNWREHDQQSVYETNFRYVKFRITVSNAQKPVVIESLNLKLDQKQKTDGGTVQANASDIKGTWVNFATEFIDASVPVLTPQSKQPLFATSDFKDEPKPKGFYVFLFDKNGNRVSGKVGWVVKGV*	hallmark_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0064	shell	direct	high	3650	1.0	GCA_003425605.1_00723
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	693145	694953	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	47186	48994	GCA_003425605_1_1_684	GCA_003425605_1_1_684	+	1858630	.	CDD:pfam07484	Tail-Collar-Domain	MADFNKPTVDSEYTQFPTEIRAAISAALSFLDGEHTNVPLKAKRWNPSTKIFEEYNGAQWVPMATEYKLPVDYNSLKNKPLPNSAVDDESDTKFASSAAVKTAYDKATEAKEAASAKQSPATTLAGYGIGNFKVEQGQGDANGYKTDGNYYLASGQNLPENGEWHIEVVSGGATNAVRQIARKANDNKIKTRFFNGSNWSEWKDAGGDGVPIGAVVSFPRSVTNPVGFLRADGLTFSQQSFPDLYRTLGDSNQLPDLTRSDVGMTAYFAVDNIPTGWIAFDSIRSTVTQQNYPELYRHLVGKYGSLSNVPLAEDRFIRNTGNGLNIGQTQSDEIKKHVHKVRTHWVNSSDSNVFYDKTKTVIDSRLRSATVTDDNLGDNGFMHPLLDTPMATGGDETRPKSLILKLCIKAKNTFDDVQFWVKAFGVVENAGILDAGTLVQNMQALSARVDQEIKENKQSTLQEINNAKVDINQQFLQAQKNLSQIGTLKTVWQGNVSSGRIDISEKCFGKTLILYLQSSESHSLDDNNNIEPVSFEVGAEIEGKRGGGVYFSSIRQVIPHNSGGTRVYHVEVKKFAVTVDRNGTTIHIEELAGRFVKRIDIR*	common_virus_hmm	common_virus	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0065	shell	direct	high	1808	0.999	GCA_003425605.1_00724
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	694965	695567	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	49006	49608	GCA_003425605_1_1_685	GCA_003425605_1_1_685	+	1858630	.	PFAM:PF14301.5	tail-fiber-assembly-protein	MKVYFLKENLNSYQIFPIPQNLNDFVEMEVENESELETKQLIDFKSQYILVDRQPTELHIWNGNSWVIDEEKQTEIKRELIKRLVDSIDDTAASISAKWTRFAEEYKERESAALAFKEANFTGEVSIYISSFATVAGLDNKSATLLILKQAEGLRTLQEQLAVQRMRKYELKHEELSEEELQQIHNDIIRKMKALTEVQQ*	phrogs_hmm	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0066	shell	direct	high	602	0.998	GCA_003425605.1_00725
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	695564	696022	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	49605	50063	GCA_003425605_1_1_686	GCA_003425605_1_1_686	+	1858630	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MTEGKVYLALYKGKKTGWTPKAILARLSDWLTRKLTKGLYSHCEIVVNKGFKVCYSSSIRDGGVRSKIMYLEHEKWDLIELQNITEERIKAYFEQTKNMRYDWWGALGIVLGIKQKRSKYFCSEWCFNAICGGENGWRFSPNQLGAMFKHDD*	phrogs_hmm	hypothetical_protein	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0067	shell	direct	high	458	0.998	GCA_003425605.1_00726
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	CDS	696671	697396	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	50712	51437	GCA_003425605_1_1_687	GCA_003425605_1_1_687	+	1858630	.	TIGR00050	RNA methyltransferase, TrmH family, group 1. This is part of the trmH (spoU) family of S-adenosyl-L-methionine (AdoMet)-dependent methyltransferases, and is now characterized, in E. coli, as a tRNA:Cm32/Um32 methyltransferase. It may be named TrMet(Xm32), or TrmJ, according to the nomenclature style chosen [Protein synthesis, tRNA and rRNA base modification]	MLENIRIVLIETSHSGNIGSAARAMKTMGLTQLCLVSPKSVDEQSYALSAGAENIVKNARVVDSFDEAVDDCSLVIGTSARLRHLQNTLIEPRECAEKVVAYKGKIAIVFGRERIGLTNEELLKCHYHLNIPANPDYSSLNLAMAVQLVSYELRMAFLVQNNKKNSLSLIEKNYPTTDQLAYFFDYTERIYQSLGFIQNQGVMRKLKRLYYRAKLEKNELNILNGMLSAVEKRIDLTKENN*	mmseqs_cdd	nonviral_gene	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_CDS_0068	persistent	direct	high	725	0.999	GCA_003425605.1_00727
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1276748	1277824	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	1	1077	GCA_003425605_1_1_1199	GCA_003425605_1_1_1199	+	1858630	.	TIGR01392	homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. [Amino acid biosynthesis, Aspartate family]	MSVQNVVLFDTQPLTLMLGGKLSHINVAYQTYGTLNAEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAGN*	mmseqs_cdd	nonviral_gene	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0001	persistent	direct	high	1076	0.999	GCA_003425605.1_01278
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1277879	1280521	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	1132	3774	GCA_003425605_1_1_1200	GCA_003425605_1_1_1200	-	1858630	.	PDB:4FM9_A	DNA-topoisomerase-2-alpha	MTDSIQSSITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLNGCLAYIDNNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATVETNEKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEIDIKRDAVGEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIESFVLHRREVVTRRSIFELRKARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATAISSRSWTLHSDIINLLDVSARPDELEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVIKEYEELLVKIADLLHILSSAERLMEVIREELEEVKAQFGDDRLTEITAASGDIDLEDLIAQEDVVVTLSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWLKVYQLPQASRGARGRPIVNILPLQENERITAILPVSAYEEDKFVVMATAGGIVKKIALTEFSRPRSNGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAENAVRAMGRLATGVRGIKLALTNDISDDESAVEIEDISDDNAEASLDLNIDKVVSLVVPKGEGEILTATQNGYGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRVSEVSIVGRNTQGVRLIRTADDEHVVSLERVCDADEEDSLEESSSEE*	common_virus_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0002	persistent	direct	high	2642	1.0	GCA_003425605.1_01279
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1281121	1282884	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	4374	6137	GCA_003425605_1_1_1201	GCA_003425605_1_1_1201	-	1858630	.	4Q84_A	Ribosomal protein S12 methylthiotransferase accessory	MTEQTFILGKDAALEDSIAKFQQKLTALGFNIEEASWLNPVPNVWSVHIRDKDCPQCFSNGKGASKKAALASALGEYFERLSTNYFFADFYLGQEIANGDFVHYPNEKWFPIEDDALLPNGILDDYLLDYFDPNAELTPELLIDLQSGNYDRGIVAMPYVRQSDEQTVYIPQSIIANLYVSNGMSAGNTKFEARVQGLSEVFERYVKNKIIAEAISLPEIPKSVMDRYPSIQASIAKLEEEGFLIYAFDASLGGKYPVICVVLLNPNNGTCFASFGAHPNFQVALERTVTELLQGRSLKDLDVFSPPSFNNDDVAEHANLETHFIDSSGLISWDLLKKTPDYEFADWDFSGTTQEEYNNLMAIFRADEKEVYVMDYNHLDVYACRIIVPGMSDIYPADDLIYANNNMGMDWREILLDLPNWHHDAETYQELLDELDGQDIDDATRVREFIGIVAPKNSGWTTLRVGELKSMLHLALGELEQALDWANWTLNMNSSVFTTEPVNYYRALISIIELHLDQNREPAQYRAVFEKMYGKDAVKQAWAAVSEGGNPFYNLPASDENLENFKEHQALLGAYGKLQKAKRAHQK*	hhsuite_tools	nonviral_gene	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0003	persistent	direct	high	1763	0.999	GCA_003425605.1_01280
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1283021	1283497	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	6274	6750	GCA_003425605_1_1_1202	GCA_003425605_1_1_1202	-	1858630	.	.	hypothetical protein	MKFEVIYKFFLVWGLALSLLFVVASGISMWLGFPFSQALDIHLFFAGFTVFGLLLHFYSRKKKWVKINTQFADLITNNRMPSYCNLDRLMMTFEHFSIQQIAEQLNLSLPILLNELSQAQINITDSHRTLCENFPLNDEKIFAAITIALKVRFNPTLL*	.	hypothetical_protein	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0004	shell	direct	high	476	0.998	GCA_003425605.1_01281
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1283733	1284539	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	6986	7792	GCA_003425605_1_1_1203	GCA_003425605_1_1_1203	+	1858630	.	COG4976	Predicted methyltransferase, contains TPR repeat [General function prediction only]. 	MTIYDINFAELYQQHLIACHHYNLPPTKWDKKAVKMAENLVGKPSAYNQQLLQAMNVQTDETVLDIGCGPGTFAVPLAQQGSTVYALDYSNGMLDCLAQFKQKLGLHNLTTFHKSWTDNWDDVPQADVVLASHSTLVDDLDDMIEKLCAKAKKRVFLTSVTQRHFLDEGVFEAIGREDIGFPTYIYLLNRLYQKGIQANLNFIETESGCFQGEIYEDLLASVEFSLGELSEKEKQGLKAFYDRKQANNELIFHGQKKWALIWWNVDRI*	mmseqs_cdd	nonviral_gene	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0005	shell	direct	high	806	0.999	GCA_003425605.1_01282
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1284591	1285292	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	7844	8545	GCA_003425605_1_1_1204	GCA_003425605_1_1_1204	+	1858630	.	TIGR03413	hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753). [Cellular processes, Detoxification]	MLFALPALNDNYIWLYQRENLPLIIVDLPETDKLFAWLDKQNATIEAVLLTHEHEDHTQGVSAFKKRYPTVPIYGPQECEKKGATQVVNEGKILTAHYQIDVIPTGGHTKQHVSFLVDNHLFCGDALFSAGCGRVFTGNYAQMFDGLQRLNTLPDETIVCPAHEYTLGNLAFAETVLVEKSAVEKQRIFVETQRAENKPSLPTTLKLEREINPFLQAKTLEEFTALRKAKDIF*	mmseqs_cdd	nonviral_gene	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0006	persistent	direct	high	701	0.999	GCA_003425605.1_01283
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1285336	1286196	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	8589	9449	GCA_003425605_1_1_1205	GCA_003425605_1_1_1205	-	1858630	.	PDB:2VDW_C	Capping-Enzyme-D1	MKNELICYKQMPVWTKDKLPQMFQEKHNTKVGTWGKLTVLKGKLKFYELTENGDVIAEHIFTPESHIPFVEPQAWHRVEALSDDLECTLGFYCKKEDYFSKKYNMTAIHGDVVDAAKIISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDFIVSTVVFMFLNRERVPSIIKNMQEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKDWEFLEYNENMGELHKTDENGNRIKMKFATMLARKK*	common_virus_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0007	persistent	direct	high	860	0.999	GCA_003425605.1_01284
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1286307	1288355	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	9560	11608	GCA_003425605_1_1_1206	GCA_003425605_1_1_1206	-	1858630	.	PRK00133	methionyl-tRNA synthetase; Reviewed	MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKLGITPEELIAKAKADHIRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPIVKESEHFFFDLPAFEGMLKEWTRSGSLQSEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIVYFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAKLNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLSDKLEDEALFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCSMGIELFRVLMSYLKPVLPKLAERAEAFLQAELRWDNIHQPLLGHTLAPFKALFSRLEKKQIDAVVEETKALFAAANKAAEKTEAKPTALSAVKPIAETITIDDLAKLDMRVAKVLKCEAVPESNKLLRFELDLGDHTRQVFSGIKAAYNKPEELEGRFVIMVANLAPRKMKFGVSEGMILSAGTGGSDLFLLSADNGVTAGMQVK*	mmseqs_cdd	nonviral_gene	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0008	persistent	direct	high	2048	1.0	GCA_003425605.1_01285
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1288506	1289618	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	11759	12871	GCA_003425605_1_1_1207	GCA_003425605_1_1_1207	+	1858630	.	PDB:3EZ9_B	ParA;-dna-binding,-winged-hth-protein	MATYFSDNLTADQQNQVQQIIQQFQHPTLQKDLIVLNTLKKVEKGGDTLRIELKLPFAWNSGAEQLKQAVSDALLKATDCKSIKWAVAYQIATLKRANNQPAVKGVKNIIAVSSGKGGVGKSSVSVNLALALQAQGARVGILDADIYGPSIPHMLGAANQRPTSPDNQHITPIKAHGLSANSIGFLMNEDSATIWRGPMASSALSQLLNETLWDSLDYLVIDMPPGTGDIQLTLSQQIPVTGAVVVTTPQDIALLDAVKGISMFERVSVPVLGIVENMSMHICSKCGHHEAIFGTGGAEKMAEKYNVKVLAQLPLHIRIREDLDAGNPTVVRVPENEISQAFLQLAEKVSTELYWQGSVIPSEILFKEVK*	common_virus_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0009	persistent	direct	high	1112	0.999	GCA_003425605.1_01286
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1289665	1290327	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	12918	13580	GCA_003425605_1_1_1208	GCA_003425605_1_1_1208	-	1858630	.	cd02149	nitroreductase similar to Escherichia coli NfsB. NAD(P)H:FMN oxidoreductase family. This domain catalyzes the reduction of flavin, nitrocompound, quinones and azo compounds using NADH or NADPH as an electron donor. The enzyme is a homodimer, and each monomer binds a FMN as co-factor. This family includes FRase I in Vibrio fischeri, wihich reduces FMN into FMNH2 as part of the bioluminescent reaction. The family also includes oxygen-insensitive nitroreductases that use NADH or NADPH as an electron donor in the ping pong bi bi mechanism. This type of nitroreductase can be used in cancer chemotherapy to activate a range of prodrugs.	MTQLTREQVLELFHQRSSTRYYDPAKKISDEDFECILECGRLSPSSVGSEPWKFLVIQNKTLREKMKPFSWGMINQLDNCSHLVVILAKKNARYDSPFFVDVMARKGLNAEQQQAALAKYKALQEEDMKLLENDRTLFDWCSKQTYIALANMLTGASALGIDSCPIEGFHYDKMNECLAEEGLFDPQEYAVSVAATFGYRSRDIAKKSRKGLDEVVRWVG*	mmseqs_cdd	nonviral_gene	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0010	persistent	direct	high	662	0.998	GCA_003425605.1_01287
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1290441	1291115	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	13694	14368	GCA_003425605_1_1_1209	GCA_003425605_1_1_1209	+	1858630	.	COG1083	CMP-N-acetylneuraminic acid synthetase  [Cell wall/membrane/envelope biogenesis]. 	MTRIAIIPARAGSKGIKDKNLQLVGGVSLVGRAILAAQESGMFDQIVVTSDGENILKEATKYGAKPVARPESLAQSDTRTIDAILHCLETLNISQGTAALLQPTSPLRNALDIRNAMEIFLGGKYKSVVSACECEHHPYKSFTLEGTEVQPIHELTDFEAPRQKLPKSYRANGAIYINDIESLFEEKRFFIAPMRFYLMPTYRSIDIDSTLDLQLAESLISKEF*	mmseqs_cdd	nonviral_gene	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0011	persistent	direct	high	674	0.999	GCA_003425605.1_01288
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1291009	1291302	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	14262	14555	GCA_003425605_1_1_1210	GCA_003425605_1_1_1210	-	1858630	.	.	hypothetical protein	MSQCSAGKLKMPAGESTIFTILKIKLNDLLLEKKLYLVIKNLHLSWLFNPTFGVQIKSAANFFRILLKLNFRLIANQVWSQYQWNDKLALNKNALAQ*	.	hypothetical_protein	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0012	persistent	ambiguous	low	108	0.367	GCA_003425605.1_01288
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1291823	1292833	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	15076	16086	GCA_003425605_1_1_1211	GCA_003425605_1_1_1211	-	1858630	.	CDD:PHA02536	portal-vertex-protein	MSKKTKKSTALSTGNQAQAFSFGEPIPVIDRAEVLNYFESVVMYEKYYNPPINLSYLAKALNASAHHNSAITVKKNILLSTCKTTALLPRTQLEKLVQDYLVFGNAYVEKTVNSFGKVVSLKSSLAKYMRVGVETGVFYQIVNGFDEYEFKKGSVFNLINPDVNQEIYGVPEYLAALQSAFLNESATLFRCKYYLNGAHAGSIIYMTDPTQNKDDIEAIKTQIRQTKGTGNFKNLFVYIPNGKKDGMQVIPLSDAIAKDDFLNIKNASRDDVLAAHRVPPQLMGIVPNNTGGFGDVEKATRVFFINEIIPLQERLKEINSWIGEEVITFSDYKLLN*	hallmark_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0013	shell	direct	high	1010	0.999	GCA_003425605.1_01289
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1292843	1294618	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	16096	17871	GCA_003425605_1_1_1212	GCA_003425605_1_1_1212	-	1858630	.	CDD:PHA02535	terminase-ATPase-subunit	MDEQVINQPSPEVTAEIKRKAQQMYFSGYKIAEISRQLDIPASTIASWKDREKWDDIAPVGRVELALETRLNLLIAKEEKSGSDYKEIDLLGRQMERMARVKKYSFGDGNEVDLNPKLANRNKGERKKAEPNAISQEQEELLINGFLDGMFNYQRIWHKAKEHRIRNILKSRQIGATYYFAHEAFVDALTTGHNQIFLSASKKQALQFRSYIVNYAKQTADVDLKGETIKLPNGAELIFLGTNSATAQSYHGNLYFDEVFWVPKFDVMRKVASGMAAQKMYRQTYFSTPTTIAHPAYAFFSGKAFNRNRAKSEKIEIDISHENLRIGKLCADRQWKQIVTINDAMEGGCNLFNIDDLIAENSKEEFEQLFLCQFADDNTSAFKFADLQLCQVDSLEEWHDYKPFYQRPFGNREVWLGYDPAFTGDRAALAIIAPPKVEGGDYRVLHWQTFHGMDYEAQASRIKSFCDDYNVTRIVIDKTGMGSGVFQEVKKFYPMAIGLDYNADLKNEMVLKTQNLIQKRRLKFDGNEIITSFMTVKKRITGTGKITYVSDRSEDASHGDLSWAIMNCILNVPYGLGGDVSSNKSTIFTFE*	hallmark_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0014	shell	direct	high	1775	0.999	GCA_003425605.1_01290
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1294783	1295607	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	18036	18860	GCA_003425605_1_1_1213	GCA_003425605_1_1_1213	+	1858630	.	CDD:pfam05929	capsid-scaffolding-protein-serine-peptidase	MAKTSKWFVVATEGATTDGRTINRTWIEQMAANYDPKKYGARVNLEHIKWRYMWNDDPHSKCYGDVVGLKTKENAEGKLQLLAQIDPTDDLIKLNKDRQKIYTSIECDPNFADTGEAYLVGLAVTDNPASLGTEMLVFSAGASANPLNNRKEKAENLFTAAIETELEFEEVKEKGLSVFAKIRALFADKEKTDNERFADQTQAIELLAEQTKETLEKLTALSDDLAKQKAEIEEMKASNAEIQATFAELQKPVEPENPRPLVYGEQPETDGRFF*	hallmark_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0015	shell	direct	high	824	0.999	GCA_003425605.1_01291
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1295628	1296677	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	18881	19930	GCA_003425605_1_1_1214	GCA_003425605_1_1_1214	+	1858630	.	PFAM:PF05125.11	Major-Capsid-protein	MNKFTKQKFNTYLAGVAQDNGEDVAFIANGGQFTVEPTIQQKLENAVLESSDFLKRINVVMVQEMKGSALRLGVLSPVASRTDTNTKARETTDIHSLQENTYSCEQTNFDTHLNYPTLDSWAKFPDFAARVGKLKAERIALDRIMIGWNGTSAATTTNRTSNPLLQDVNKGWLVQIEDKAKACVLKEIEKSSGKIEIGAGKTYKNLDALVFALKEDFIPAQYRDDTKLVAIMGSDLLADKYFPLINQEKPSEILAGDTVISQKRVGGLQAVSVPFFPKGTVLVTSLDNLSIYVQEGKVRRHLKDVPERNRVEDYLSSNEAYVVENYEAVAMAKNITILEAPAPIPPVAA*	hallmark_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0016	shell	direct	high	1049	0.999	GCA_003425605.1_01292
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1296689	1297339	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	19942	20592	GCA_003425605_1_1_1215	GCA_003425605_1_1_1215	+	1858630	.	PFAM:PF05944.11	small-terminase	MRPTKRHFLEVSAAIANAAETEDLSDFTEYEKMCRILARHRKDLKNIQSTERKGAFKKQILPDYLPWIEGALSVGSGKQDNVLMTWCVWAIDCGEYHLALQIADYAVFHDLRLPEPFTRTLGTLLAEEFADQAKAAQAANKPFEVAYLEQVQRITADCDMPDESRARLLRELGLLLVEKHPEQALAYLERALGLDQKIGVKGDIKKLKKQLSATEC*	hallmark_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0017	shell	direct	high	650	0.998	GCA_003425605.1_01293
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1297633	1298139	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	20886	21392	GCA_003425605_1_1_1216	GCA_003425605_1_1_1216	+	1858630	.	PFAM:PF05926.10	head-completion-protein	MSDGAISVKLAPDYEMGEVQQQLNDDDTSDDIISNDGFFPDMSLAQFRNQYRADGTITTQRLQDALIEGMASVNAELSMFKTQSKHDSLEQITAPSINGESVLIYRYKRAVSCLALANLYERYASYDSTNDGEKKMALLKDSIDELRRDARFAISDILGRKRVDVELI*	hallmark_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0018	shell	direct	high	506	0.998	GCA_003425605.1_01294
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1298139	1298348	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	21392	21601	GCA_003425605_1_1_1217	GCA_003425605_1_1_1217	+	1858630	.	COG5004	P2-like prophage tail protein X  [Mobilome: prophages, transposons]. 	MQVYAQQNDNLDAILYRHFGRSEGLLEITCELNPHLMDKPIIPIGTPVILPDADTEKISVANDTIQLWS*	mmseqs_cdd	nonviral_gene	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0019	shell	direct	high	209	0.995	GCA_003425605.1_01295
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1298350	1298571	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	21603	21824	GCA_003425605_1_1_1218	GCA_003425605_1_1_1218	+	1858630	.	pfam16080	Bacteriophage holin family HP1. Phage_holin_2_3 is a family of small hydrophobic phage proteins called holins with one transmembrane domain. Holins are produced by double-stranded DNA bacteriophages that use an endolysin-holin strategy to achieve lysis of their hosts. The endolysins are peptidoglycan-degrading enzymes that are usually accumulated in the cytosol until access to the cell wall substrate is provided by the holin membrane lesion.	MHDTPSRASYTSGIFAFLIGRIADMFSNVNWADVASITGIVIGVATFLVNWYYKKKDFELKEKELKQRSHHYD*	mmseqs_cdd	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0020	shell	direct	high	221	0.995	GCA_003425605.1_01296
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1298564	1299082	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	21817	22335	GCA_003425605_1_1_1219	GCA_003425605_1_1_1219	+	1858630	.	CDD:cd16901	P1-lysozyme	MIKRSAKYICAISAVVGLVIATYGNDIRTSEKGLLLIGNAEGCMKKPYQCPADVLTVGIGITDAVEKIDRNKIYSLQEIAELYVKGIKQSEKCVNQYANGQTMPQGAFDALVSITFNVGCGKLKNSSLFKMARQGYSKAMCSQFERWIYAAGKPLKGLIERRQKEKNLCLIS*	common_virus_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0021	shell	direct	high	518	0.998	GCA_003425605.1_01297
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1299067	1299417	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	22320	22670	GCA_003425605_1_1_1220	GCA_003425605_1_1_1220	+	1858630	.	CDD:TIGR03495	phage-lysis-regulatory-protein	MFNFLTAKERSILLIGPILLVLLIMFLGFEANYWRKEMLKEEQLKLKWQNAYIELNHSVQNFAEQQAQLIQAVNNLKAKQNQQTQDLKNVLKSNQDWADSPLPDDVKRLLNSAGNH*	common_virus_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0022	shell	direct	high	350	0.997	GCA_003425605.1_01298
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1299592	1299807	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	22845	23060	GCA_003425605_1_1_1221	GCA_003425605_1_1_1221	+	1858630	.	PHA00080	DksA-like zinc finger domain containing protein	MTDQFDRAQQLEEMQREIALKKHRTFKAVSRLYCEDCDAPIPEKRRQMIQGATRCVTCQQRFEMQQRNFRK*	mmseqs_cdd	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0023	shell	direct	high	215	0.995	GCA_003425605.1_01299
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1299804	1300274	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	23057	23527	GCA_003425605_1_1_1222	GCA_003425605_1_1_1222	+	1858630	.	PFAM:PF06891.10	tail-completion-protein	MKKPNQLRKILEQSHPDFVKNPDHLQLYVDGGQIVATGAASFSFEYRYTLNVVVTDYAGDIATLIVPMLAYLRTNQPEIFENPQIRENAFKFQVDYNNNHTADISFEIQLTERVVSKKDGNNVQIHYAKEPVWDEPTRVKVYLENWDSPIFEGDIV*	hallmark_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0024	shell	direct	high	470	0.998	GCA_003425605.1_01300
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1300274	1300735	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	23527	23988	GCA_003425605_1_1_1223	GCA_003425605_1_1_1223	+	1858630	.	PFAM:PF05069.12	Virion-morphogenesis-family	MATVEEIQAKLTALIANLSPQVRRQLGRKIGQALRKSQSNRIARQQNPDGTAFEPRKPRKEFGKKKGRIKRKAMFAKLRTARHLKARSNGNEVSVGFNGSSAAIAAVHQYGLTARPSKEKDFKVRYAQRELLGISEQDLSMLNELVIEQISKS*	hallmark_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0025	shell	direct	high	461	0.998	GCA_003425605.1_01301
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1300736	1301083	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	23989	24336	GCA_003425605_1_1_1224	GCA_003425605_1_1_1224	-	1858630	.	.	hypothetical protein	MKNKRTSRTLIMLNIAMWSLVIISTCLHYQFNPFSFIWFDVIAPVGHFFAVVFSALSSFTVSMYELFKPETFWGWVWFVMFVVPIICLPLYVVLLVLFAGKLSHHDTVVPPSYLK*	.	hypothetical_protein	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0026	shell	direct	high	347	0.997	GCA_003425605.1_01302
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1301187	1301369	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	24440	24622	GCA_003425605_1_1_1225	GCA_003425605_1_1_1225	+	1858630	.	CDD:pfam05069	virion-morphogenesis-protein	MPLIKCLLQFAVHQYGLTARPSNNKDFKVQYAQRELLGFAEEDIEMIERFVLRAIAGKEF*	hallmark_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0027	shell	ambiguous	low	69	0.377	GCA_003425605.1_01303
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1301380	1301691	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	24633	24944	GCA_003425605_1_1_1226	GCA_003425605_1_1_1226	-	1858630	.	.	hypothetical protein	MEIFVLLIGLPIIVGLLIAFGTAVLAAFSYIFVGALSLAINFWYITLAVMLVLLAPLIYLNSWLFWILAALVIFFTVAWFFGGDTEQIKAEIERKRIAKEHKL*	.	hypothetical_protein	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0028	shell	direct	high	311	0.997	GCA_003425605.1_01304
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1301794	1301967	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	25047	25220	GCA_003425605_1_1_1227	GCA_003425605_1_1_1227	+	1858630	.	CDD:pfam05069	virion-morphogenesis-protein	MPLIKYLLQFAVHQYGLTARPSNNKDFKVQYAQRELLGFSNSDLEMIEDLIIEKLSL*	hallmark_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0029	shell	direct	high	173	0.994	GCA_003425605.1_01305
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1301945	1302205	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	25198	25458	GCA_003425605_1_1_1228	GCA_003425605_1_1_1228	-	1858630	.	.	hypothetical protein	MIAILSLFILSVGLLGLAIGFGVIAVPWFVSLVIAAPAIFIYMLMIGSVLWLVEVNFFLGMAALVVYAYWIHIIRKHLKSKGLISQ*	.	hypothetical_protein	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0030	shell	direct	high	260	0.996	GCA_003425605.1_01306
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1302274	1302984	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	25527	26237	GCA_003425605_1_1_1229	GCA_003425605_1_1_1229	+	1858630	.	Uniprot:A0A0A8U8Z7_ECOLX	tail-tape-measure-protein-	MNNLQLTVLLNAIDKISAPVRSASKSVHELSAKLKESKSIHRQLNQQNKQHQAAMKQYASAINPLKSKLDSLNQELEQAKQKAASYAQYMKNAQHPTAGFQKEVEKAKSAVKKLKQEQIDAANKLQQARQELAKSGISAEKLAQKQRELQKNTKSATDQIKNQEAALKKLNAKQAAYNQYRGQVEKLKDISGKAQIIGAQATAAGTTMTAPIVNSIRDFMSFEDVMAGGLLAKFQG*	hallmark_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0031	shell	direct	high	710	0.999	GCA_003425605.1_01307
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1303086	1305050	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	26339	28303	GCA_003425605_1_1_1230	GCA_003425605_1_1_1230	+	1858630	.	PFAM:PF10145.8	minor-tail-protein	MVTAAARMDIQENELEDFIRLNTQMATAFDAENPDELVELFGKVQKNFKLTTKDAKELADTINYLDDNAISKGTDIINFLNNTSGIGNLVKISEKNLAALGSTLLTAGNEASTSAKAIESTFNRLSKATRMKPVNNGLKALGLDPKAIQKAMVKDAQGTLMMIVEKIKKLPKHLQAGVISDIAGGNYNTQLAGLVANTEEWRRQIELANSEEAKNSMAREFQTRMTTLSAKWQLFKNRLFNVNSSVGASLKDSMTSLMDGVGNLLDKIETWIDEHPKLTSTIAKTAVAIGGSLSLLGALSLALSFILYPAARLFLGLSKLNVIIPKFSGHLSSAGRLILRGLLSPLKLIALAISPLGIALLSVAALIYKFWQPIKAFFGGFWEGLKSGLAPVLEKFQPLGTAFGVVVGWIEKAVKWFTDLLSPVQSTKEDLDAAVSAGERFGNGMAKAIEFILTPLTRLMDGIKWISENMPSWEGIKNSVSSAWERTKNTSSNAWQSTKETAGSAWESFKDFTGFGSNGKKLPSQNWSGGYTGNGGKYEPMGIVHGGEYVMTKEATSRLGVNTLNALNYGKRALIAGGLGISVATAAPVQVDTRAPIFARPMMTQTSQPMSVNITINAAQGMDERAIAQQVAKQIQRIENQRQARARSSMWDRA*	hallmark_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0032	shell	direct	high	1964	0.999	GCA_003425605.1_01308
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1305127	1305294	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	28380	28547	GCA_003425605_1_1_1231	GCA_003425605_1_1_1231	+	1858630	.	.	hypothetical protein	MNENAPFIREIIDRTSQIKGERVKGDNAKEIKANVQTILKAQLRATQLNARTQTY*	.	hypothetical_protein	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0033	shell	direct	high	167	0.994	GCA_003425605.1_01309
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1305272	1305724	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	28525	28977	GCA_003425605_1_1_1232	GCA_003425605_1_1_1232	+	1858630	.	.	hypothetical protein	MLERKHIKFVEIHHLFTQISLALGFTEQDIDKHSTNLAELIALWQQQEFVEVYVENKDRLFGRAKDSSLAYGASPYYIGLYHARLSYEENDPLVVLTFNYEDNPEQTTVSVRFMVDHDTLFGTKEEKFIQQRMKDIRKRIDDFIQLGNKK*	.	hypothetical_protein	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0034	shell	direct	high	452	0.998	GCA_003425605.1_01310
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1305822	1306379	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	29075	29632	GCA_003425605_1_1_1233	GCA_003425605_1_1_1233	+	1858630	.	.	hypothetical protein	MTNLSLNPIFESFAPIFKQLKTVAMSALFIAPLAINHPVRHTTHTVNIFSVQTDENKSINQQDIEKIIDMVKAVSAITDFVIASITAESLSYIDLSDVLRLESKINKYDDLANNIMVNNKTPELSTTLQSFSNKMHTLCNMMKSEKYKQQSDEVVLSRLYRKSEDAGYTYKSSHSFDDFKKAVMM*	.	hypothetical_protein	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0035	shell	direct	high	557	0.998	GCA_003425605.1_01311
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1306388	1306816	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	29641	30069	GCA_003425605_1_1_1234	GCA_003425605_1_1_1234	+	1858630	.	.	hypothetical protein	MKIELSKQFQEGRLNTPFFKDIQAMSDEELQLIFDFMQSIKQGKLLRGKNKPSWLDDNLNDIPNTEVYQQNEIWHYHCGPYNKGSRYCPMSGLKINLNGETSGPVIHYQKISDEHIVIIAFSPQHEPFPREWDTPNPIIDRA*	.	hypothetical_protein	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0036	shell	direct	high	428	0.998	GCA_003425605.1_01312
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1306926	1307519	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	30179	30772	GCA_003425605_1_1_1235	GCA_003425605_1_1_1235	+	1858630	.	PDB:3VTO_Q	central-spike-protein	MSAELQRKLDNIIRFGVIAEVNHATARARVKSGDILTDFLPFVTFRAGTTKTWSPPTVGEQCVMLSVSGEFTTACILVGLYTQNSPSHSADEHVIEFADSAKITYNQSNGALIVTGIKTASITAANQIDIDCPTINIKGNVNIDGSLSTTGTSTTKGNISTQGSVTASGDIKGGSISLQNHVHVEQGDGQRTSNAKA*	hallmark_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0037	shell	direct	high	593	0.998	GCA_003425605.1_01313
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1307488	1307859	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	30741	31112	GCA_003425605_1_1_1236	GCA_003425605_1_1_1236	+	1858630	.	CDD:PHA02516	baseplate-wedge-subunit	MANEPLTQRHSMNRYTGETLKNESDHIKQSIADILLTPVGSRIQRREYGSLIPMLIDRPISHTLLLQLAACAVTAINRWEPRVQITQFKPELVEGGIVASYVARSRKDNQEMHNEKLFLGHKQ*	common_virus_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0038	shell	direct	moderate	338	0.909	GCA_003425605.1_01314
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1307856	1308770	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	31109	32023	GCA_003425605_1_1_1237	GCA_003425605_1_1_1237	+	1858630	.	CDD:PHA02568	baseplate-assembly-protein	MSELVDLSKLDAPKVLEDLDFESLLTDRKTEFIALFPQDERAFWQARLSLESEPITKLLQEVVYLQLMERNRINNAAKATMLAYASGSNLDVIAANYNVKRQVIQEANNNVTPKIPEILEDDTSLRLRTQLAFEGLSVAGPRSAYIFHALSAHPDVADVSVVSPQPANVTVTILSRNGQGEAEESLLNVVRAKLNDDDIRPIGDRVIVQSAVIQSYEIRAKLHLYRGPEYEPIKAAALKKLTAYTEEKHRLGRDISLSGIYAALHLEGVQRVELISPTADIVLPSSKSAYCTAINLEIVTSDDY*	hallmark_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0039	shell	direct	high	914	0.999	GCA_003425605.1_01315
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1308757	1309296	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	32010	32549	GCA_003425605_1_1_1238	GCA_003425605_1_1_1238	+	1858630	.	PFAM:PF09684.9	Tail-protein	MMITNHLLPIGSTPLEKRAAEILKSAVENPIVIADLINPERCPAELLPYLAWAFSVDKWDENWTEEVKRIAIKQSYFVHKHKGTIGAVKRVVEPIGYLIELKEWFQTNPQGTPGTFSLTVEVSESGLNEQTYNELVRLINDVKPVSRHLNQLAIAISPTGSLSAFVGQQWGEIITVYPQ*	hallmark_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0040	shell	direct	high	539	0.998	GCA_003425605.1_01316
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1309305	1311827	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	32558	35080	GCA_003425605_1_1_1239	GCA_003425605_1_1_1239	+	1858630	.	PFAM:PF12571.7	tail-collar-fibre-protein	MASQYFAILTDYGTRAFAQALSQGQPLQLTQFAVGDGNGQAVTPTASATALVHQTHIAPVSAVSLDPRNNKQVIVELTIPENIGGFYIREMGVFDAQNKLIAYANCPESFKPTESSGSGKVQVLRMILKVESSSAVTLSIDNSVIFVTRQQMTPKTITATTQNGFNESGHSHQIAKASTTQQGIVQLTNDTGLESESLALTAKAGKKLAQQTTQLQLNVSQNYIQNSKKSSAVNSESEDNVATSKAAKTAYDKAVEAKTTADGKVGLNGNESINGEKSFENRIVAKRNIRISDSQHYASRGDYLNIGANNGDCWFEYKSSNREIGTLRMHANGDLTYKRQKIYHAGAKPQFNTDIEGKPNTLAGYGIGNFKVEQGQGDANGYKTDGNYYLASGQNLPENGEWHIEVVSGGATNAVRQIARKANDNKIKTRFFNGSSWSEWKDAGGDGVPIGAVVSFPRAVTNPVGFLRADGSTFSQQTFPDLYRTLGNSNKLPDLTRSDVGMTAYFAVDNIPAGWIAFDEIATQVTEQRYPELYRHLVGKYGSISNVPLAEDRFIRNTGNGLNIGQTQSDEIKKHVHRVRTHWADSSDSSIFYDKTKTVIDSRLRTATTTDDNLSDNGFMHPLLDTPMATGGDETRPKSLILKLCIKAKNTFDDVQFWVKAFGVVENAGILDAGTLVQNMQALSARVDQEIKENKQSTLQEINNAKVDINQQFLQAQKNLSQIGTLKTVWQGNVSSGSINISEKCFGKTLILYLQSSSGHRLDDNNNIEIVSFEVGAEIEGKRGGGVYFSSIRQVIPHSSGGTSVYHVEVEEFAVTVDRNGTTIHIEELAGRFVKRIDIR*	hallmark_hmm	common_virus	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0041	shell	direct	high	2522	1.0	GCA_003425605.1_01317
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1311839	1312441	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	35092	35694	GCA_003425605_1_1_1240	GCA_003425605_1_1_1240	+	1858630	.	PFAM:PF14301.5	tail-fiber-assembly-protein	MKVYFLKENLNSYQIFPIPQNLNDFVEMEVENESELETKQLIDFKSQYILVDRQPTELHKWNGNSWIVDEKKKTEIKRELIKNLVDSIDDTAANISSRWIRFAEEYKEREAAAIAFKEANFAGEVSVYISSFATVAGLDNQSASLLILQQAERLRALQQQLAVQRMRKYELKHEALSDEELKNIHDDIVSKMRQLAEAQQ*	phrogs_hmm	hypothetical_protein	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0042	shell	direct	high	602	0.998	GCA_003425605.1_01318
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1312438	1312941	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	35691	36194	GCA_003425605_1_1_1241	GCA_003425605_1_1_1241	+	1858630	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MIGTKIYLALYKGKKTGKNPNALLARLSDWLTRKLTKGVYSHCEIAVMKEVFVSGHHYETEVMYECYSSSIRDGGVRCKQIDVYDREKWDLIPLDGVTEAQIKAYFDRTLGCKYDWWGAVGIVLGIKQKRSKYFCSEWCFNCIKNSNEGWRFSPNQLAVAFTTVSNN*	phrogs_hmm	hypothetical_protein	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0043	shell	direct	high	503	0.998	GCA_003425605.1_01319
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1312997	1313818	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	36250	37071	GCA_003425605_1_1_1242	GCA_003425605_1_1_1242	+	1858630	.	.	hypothetical protein	MSILGSMTDAVNKTKTPQAPTISTQSPTKDTSQTMAGNVSNLLNSNSLLMNSAAAKGERMAANRGLQNSTIGVESAQRAMLDAAIPIASQDTQNAFAEKQTRLQADLNFQNQSKLNQQQNQFTASQAELERGHQRGMAQLQSDLAYSNQSRLNQAQNQFTASQAALERQQQKDMANLNHQNEMKNLNAQVAANTIGKSIDFTMQITNNFDAQIATILNNSNMKAEDKTKAIEQLKASRDSEIQFMSKFMQGIPTTQQNWSSFPSLGVPSIQIS*	.	hypothetical_protein	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0044	shell	direct	high	821	0.999	GCA_003425605.1_01320
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1313832	1314200	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	37085	37453	GCA_003425605_1_1_1243	GCA_003425605_1_1_1243	+	1858630	.	.	hypothetical protein	MAFWDGAWDAISGAGKWLGETAGSAMDWMDNHKAASNIIGNVIAGAGGYFAQKQAGKDLINQQRELLNLQDQMKSKYSAVPDADWSYKSLTVDDSPGLANGGILTEMKKRSETKGANNGRVA*	.	hypothetical_protein	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0045	shell	direct	high	368	0.997	GCA_003425605.1_01321
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1314184	1315356	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	37437	38609	GCA_003425605_1_1_1244	GCA_003425605_1_1_1244	+	1858630	.	.	hypothetical protein	MAELHDSFGESMEKAGYERASDSDSSFSGGGGWREDNSSDSYRSTSDRWNDHKSRYGKDKVYTDAFNERRNNSSWSGGHSAISRTISEKYHSLSNGQMSAAVPEKDQKTLTGGLFGKSYSNAPYSERTPSIFDRNIRGSMTLNNGDVWSSDPQYSSVRERADINSYDRIKRGEELNLIGRAVGGVFSGVGGAATTPVGKIAESAANFGLSHVGDLSRQFKSNQEQAYYDSLTPEGKAYYDTRVDFINKSYKNAREKYETNDKWIDRGITAAQVGLSALGPPGAMLGSGIGLLGKAINKKDTMTKSLRDLTETLNSNALNNHIAQQNELAEKERQAYKEFMAGRDLRSDNTQPKGILNTMHNRMQNIDPDKQVKTSDVPNLRNYWANIIVS*	.	hypothetical_protein	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0046	shell	direct	high	1172	0.999	GCA_003425605.1_01322
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1315366	1315893	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	38619	39146	GCA_003425605_1_1_1245	GCA_003425605_1_1_1245	+	1858630	.	.	hypothetical protein	MGILDSMTQQSQPQTTEQSAVENPQGSQQQGSMAQMYQMLMQNSINAIANVAQQRIQEKGPEEGIADLVAKAMISNLQAAQQNGKTIPPQVMMQVAKDLAMQLLQQVGVPEEQIDDVLIDILMNALEQFGEATHGALPQEEEQQYVDMINKVSEMESQRRAQVQNGQSKPMQQGA*	.	hypothetical_protein	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0047	shell	direct	high	527	0.998	GCA_003425605.1_01323
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1315897	1316661	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	39150	39914	GCA_003425605_1_1_1246	GCA_003425605_1_1_1246	+	1858630	.	.	hypothetical protein	MGWGGILGAMTQGLGTGIVKNVEQGWKDEETQKLLDWKTAEADKQRAFDSELLDKKYKHEFELEDHRTRNEISAAAAKARISARYSHGGESEAQKNLLGATQTLGIYDSQLHSLQEKLSATEDKEQQNAIAARINAVSAERENYLKRPDTIAAFKGAGQMGQALYMTGGGNMDLYNPKPVERETVAEDVKSSVAPPVRNMIDVNNLTPQQAADIARQKSEDAARLQFSKASADAKDWAQKRTQYQSSTFIPRTF*	.	hypothetical_protein	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0048	shell	direct	high	764	0.999	GCA_003425605.1_01324
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1316777	1316908	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	40030	40161	GCA_003425605_1_1_1247	GCA_003425605_1_1_1247	-	1858630	.	cd22803	Anti-CRISPR type II subtype C5. AcrIIC5 was discovered via a guilt-by association (GBA) approach, which was based on the strong co-occurrence and clustering of acr and anti-CRISPR associated (aca) genes through proximity and homology searches. AcrIIC5 inhibits Cas9 activity in vitro, as well as CRISPR interference activity in bacteria. It also prevents Cas9-mediated genome editing in mammalian cells. AcrIIC4 and AcrIIC5 are the most potent among the type II-C Acr proteins, preventing substrate DNA binding by Cas9, and exhibiting higher specificities for inhibition of type II-C Cas9s. Type IIC CRISPR-Cas systems are the simplest of the type II systems, employing only three Cas proteins, Cas9, Cas1, and Cas2. Almost all type II Acr proteins characterized to date directly interact with the Cas9 endonuclease, although by distinct mechanisms. The type II CRISPR/Cas subtype has a distinct crRNA-guided surveillance complex encoded by cas9 (formerly csn1), cas1, cas2, and csn2 (for type IIA) or cas4 (for type IIB) genes, all located in a single transcriptional unit directly upstream of the CRISPR locus. Cleavage of the DNA target in type II systems is carried out by Cas9 which is an RNA-guided double-stranded DNase with two independent nuclease domains, HNH and RuvC. Due to the reliance of the type II system on a single protein for function, Cas9 homologs derived from different subtypes and species have been utilized for numerous gene editing applications. CRISPR-Cas immune systems are used by certain prokaryotes and archaea to resist the invasion of foreign nucleic acids such as phages or plasmids. Anti-CRISPRs are small proteins which are the natural inhibitors for CRISPR-Cas systems; encoded on bacterial and archaeal viruses, they allow the virus to evade host CRISPR-Cas systems. The CRISPR-Cas-mediated adaptive immune response can be divided into three steps, including the acquisition of spacer derived from invading nucleic acids, crRNA processing, and target degradation. Theoretically, Acr proteins could suppress any step to disrupt the CRISPR-Cas system. Acr proteins are diverse with no common sequence or structural motif, and they inhibit a wide range of CRISPR-Cas systems with various inhibition mechanisms. CRISPR-Cas systems are divided into two classes (1 and 2) and six types (class 1: types I, III and IV; class 2: types II, V and VI). Class 2 systems employ a single multi-domain effector Cas9 protein complex that performs target recognition and cleavage. Acr families are named for their type and subtype which are numbered sequentially as they are discovered.	MKIDNQDFIDFVENCSDEQGIEEFERAKAIVEKDFAFVTVTDD*	mmseqs_cdd	nonviral_gene	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0049	.	unmatched_CDS	none	0	0	.
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1316954	1317046	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	40207	40299	GCA_003425605_1_1_1248	GCA_003425605_1_1_1248	-	1858630	.	.	hypothetical protein	MKTLYFCSLDGNPRKVFQSEELAKQWKEQG*	.	hypothetical_protein	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0050	shell	direct	moderate	92	0.989	GCA_003425605.1_01325
GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote	cenote	CDS	1317462	1317632	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C64	40715	40885	GCA_003425605_1_1_1249	GCA_003425605_1_1_1249	+	1858630	.	.	hypothetical protein	MQVIKLLKRIVRRLRLFFCGLFTRPTAPRRAPWASLIPSNPESAPKLRVSLAKKES*	.	hypothetical_protein	C64	40885	1276748	1317633	GCA_003425605.1|CP031679.1@region_1276749_1317633@tool_cenote_CDS_0051	.	unmatched_CDS	none	0	0	.
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1421483	1422307	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	1	825	GCA_003425605_1_1_1332	GCA_003425605_1_1_1332	-	1858630	.	2YB1_A	AMIDOHYDROLASE	MAKKYDLHCHSTASDGVLSPTELVHRAYAQGVNVLALCDHDTIAGIDEAEIAAKEVGIELITGVEISTNWEGRGIHIVGLNFDKTHPKMTALLQSQKALREKRAVEIGDKLEKAGIPNAYDGAKALADGEVTRAHYARYLVQIGKVSNDGQAFKRYLGQGKSAFVKAEWADIPTAIETIHAAGGVAVIAHPLRYNMTGKWVRKLIVDFKAWGGDGMEMADCGQTKDQRQMLARWAKEFNLLGSVGSDFHFPCGWIELGKNLDLVDSVIPVWEKF*	hhsuite_tools	nonviral_gene	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0001	persistent	direct	high	824	0.999	GCA_003425605.1_01410
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1422307	1423326	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	825	1844	GCA_003425605_1_1_1333	GCA_003425605_1_1_1333	-	1858630	.	TIGR01036	dihydroorotate dehydrogenase, subfamily 2. This model describes enzyme protein dihydroorotate dehydrogenase exclusively for subfamily 2. It includes members from bacteria, yeast, plants etc. The subfamilies 1 and 2 share extensive homology, particularly toward the C-terminus. This subfamily has a longer N-terminal region. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]	MYQLFRHGIFQMDAEKAHDFTIQCLKLSGNPLFQPILKSLIHAPKGFPKTVMGVNFPNPIGLAAGADKNGDAIEGFGALGFGFLELGTVTPVAQDGNAKPRQFRLIEAEGIINRNGFNNNGIDYLIENVKNARYKGVIGINIGKNKFTPLEQGKDDYIFCLNKAYNYAGYITVNISSPNTPDLRQLQYGDYFDDLLRSIKDRQTILANQYNKYVPIAVKIAPDLTESELVQIADTLVRHKMDGVIATNTTISRDTVMGMKNAEQQGGLSGKPLQHKSTEIIKRLHQELKGQIPIIGSGGIDGLQNAQEKIEAGAELLQVYSGLIYHGPKLVKELVKNIK*	mmseqs_cdd	nonviral_gene	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0002	persistent	direct	high	1019	0.999	GCA_003425605.1_01411
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1423490	1423666	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	2008	2184	GCA_003425605_1_1_1334	GCA_003425605_1_1_1334	-	1858630	.	PFAM:PF09979.8	head-maturation-protease	MKFTDKTTQAATQRTITKDGFLVVPATISKVGVFDYLATELGLKEDGIKKVARTEKSL*	phrogs_hmm	nonviral_gene	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0003	shell	direct	high	176	0.994	GCA_003425605.1_01412
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1423807	1424988	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	2325	3506	GCA_003425605_1_1_1335	GCA_003425605_1_1_1335	-	1858630	.	PFAM:PF04233.13	Minor-capsid-component	MTDDVERAMQQPQGSFFMDDAKGFQAISAKVLMKVLEKYEKSDRTSQAENIANGFVGRGDAQNHAEVSTNLKNQTGIDLSAYLRNSPNIAERVNALTAGNIQLIKSIRSQYLDKVQNTVMQAMVRGSLNKDLAAQVKDLGKTTEKRAMFIARDQSSKLNAALTQARHEEVGIKKYMWSTSGDERVRESHAEKDGQIFEYANPPADTGHPGHDVNCRCVQIPVLDDVVNLKSEETELSYQAAEPNKTGKMDLDELFESSIGGGGNKSFSNFGGVNSELITLAKESIGLDITDWQHSIDESSIRHILKQHGNEKAENKRGQRAVTKKDILLLPLVVSAFDSIEYTGTSDSGNETFLIKKEIDDEIFSVQEVRKRHKKIAVKTMWIKRKKKATSSA*	hallmark_hmm	common_virus	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0004	shell	direct	high	1181	0.999	GCA_003425605.1_01413
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1425017	1426351	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	3535	4869	GCA_003425605_1_1_1336	GCA_003425605_1_1_1336	-	1858630	.	PDB:8HDS_J	Portal-Protein	MNILDGIKSLALKLGSKQDQTYYARGLSLTDDLMQIEALWRDNWIANKVCIKRSEDMVRNWRDIFSNDLKSEQLDEFTKLERRLKLRETLTKALQWSSLYGAVGLLLVTDTINITSPLQPTERLKRLIILPKWKISPTGQRDDDVFSPNFGRYSEYTIIGGTQSVLVHHSRLLIINANDAPLSDNDVWGVSDFEKIIDVLKRFDSASANVGDLIFESKIDIFKIAGLSDKISAGLENDVAHVISAVQSIKSATNSLLLDAENEYDRKELSFGGLKDLLTEFRNAVAGAADMPVTILFGQSVSGLASGDEDIQNYHESIHRLQETRLRPVLEVLDTLLCNELFGGQPDDWWFEFLPLTVVKQEQQVNMLNTFATAANTLIQNGVVNEYQVANELRESGLFANISAEDIEEMKNVNEFAGNFEEPENTEDSQVQASEDEQENGALV*	hallmark_hmm	common_virus	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0005	shell	direct	high	1334	0.999	GCA_003425605.1_01414
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1426353	1427696	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	4871	6214	GCA_003425605_1_1_1337	GCA_003425605_1_1_1337	-	1858630	.	PDB:4IDH_A	Large-Terminase	MSQLNIQFPTKFRPLFESIWPFIIFYGGRGSGKSFSIARALVLRAYQSPVRVLCCREIQKSISDSVIQMLADQIEMLGLQNFFDVQKTQIIGQNGSRFTFAGLKTNITSIKSMTGIDVVWVEEGENVSKESWDILIPTIREDGSQIIVSFNPKNILDDTYQRFVIHPPERCKSVLVNWQDNPYFPKELMEDMEQMRERDYELYRHVYEGEPVADSDLAIIKPVWIECAVDAHLKLGFTAKGMKKVGFDVADEGADSNDNAFVHGSVVLDIEVWKNGDVIDSANRTNQSAVKFKADLIIFDSIGVGAGVKAHFKRLPKSLQVEGFNAGGAVAYPEREYIKGKKNQDMFSNIKAQSWWALRDRFYKTYRAVKHGDVYPDDELISLSSNIKELEYLKAELSRPRVDYDNNGRVKVESKKDMKKRGIPSPNMADALVMCYATTKPKSLLDL*	hallmark_hmm	common_virus	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0006	shell	direct	high	1343	0.999	GCA_003425605.1_01415
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1427683	1428195	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	6201	6713	GCA_003425605_1_1_1338	GCA_003425605_1_1_1338	-	1858630	.	PFAM:PF03592.15	Terminase-small-subunit	MSDVKGKSTSGRGLTPKQEKFCQLYIELGNASEAYRQSYDCQDMKSESINRLAKKELDKIKIRSRVDVLQQEHRQRHNLTLDNIIADLQEYRDICMGRKPLTITTVVKNAQEGTAQSVNTECFVFEPTGANKALELLGKHLGMFTNKVDVTTDGKPLPTVINVTFSDEPA*	hallmark_hmm	common_virus	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0007	shell	direct	high	512	0.998	GCA_003425605.1_01416
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1428240	1428518	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	6758	7036	GCA_003425605_1_1_1339	GCA_003425605_1_1_1339	+	1858630	.	COG1396	Transcriptional regulator, contains XRE-family HTH domain [Transcription]. 	MNHLLTFYEKIIFTNPLETGIPEAVAKLALLNDYSALRAWREHLGLTQAEVASRLGISQAAYSQHENSQTLRKSTRIKIATALGINSAQLDF*	mmseqs_cdd	nonviral_gene	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0008	shell	direct	high	278	0.996	GCA_003425605.1_01417
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1428520	1428762	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	7038	7280	GCA_003425605_1_1_1340	GCA_003425605_1_1_1340	-	1858630	.	PDB:5CYB_A	Lipoprotein	MLTLVCLSLFLTACTNKITTKPEYIYPPQAYTAPCVKTAFTGETYGDVVIQLVKVTAERDKCASQVDHLNKWINQAKGGK*	common_virus_hmm	common_virus	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0009	shell	ambiguous	low	49	0.202	GCA_003425605.1_01418
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1428713	1429018	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	7231	7536	GCA_003425605_1_1_1341	GCA_003425605_1_1_1341	-	1858630	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MALAGVVVVLIGALRYQSSVIDELEITTKQQENTIQQQEDANKSLSLALQQERYAIIEQQERNNEIERIATENAESVKTIIKTQPCAHTRLPQSVLDRLHE*	mmseqs_cdd	nonviral_gene	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0010	shell	direct	high	305	0.997	GCA_003425605.1_01418
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1429029	1429631	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	7547	8149	GCA_003425605_1_1_1342	GCA_003425605_1_1_1342	-	1858630	.	PDB:3WH1_A	Chitinase-	MTMMISEVTFNKIFPHAVKGVYQAISAQIEKAGCVNKMQQAMFLAQCGHESGGFTRFKENLNYSWLGLSKTFRKYFPDPLIAKKYERKPELIANRVYANRLGNGDEKSGDGWKYRGRGLIQITGKDNYAAFRKWLGRDIEPDDVAGNLDLSVKTAVWYWKCYELAELNSVEKVTRRINGGLNGIDERCKLYRALMVTDND*	common_virus_hmm	common_virus	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0011	shell	direct	high	602	0.998	GCA_003425605.1_01419
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1429600	1429956	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	8118	8474	GCA_003425605_1_1_1343	GCA_003425605_1_1_1343	-	1858630	.	TIGR01594	phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]	MPIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPAIRYVLIDAAMCASIAGVAVPICTHLFGHTEYSSFLGTMIGFVGTEKIREFLFKFINRRIEKDDNDDFRSDI*	mmseqs_cdd	nonviral_gene	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0012	shell	direct	high	356	0.997	GCA_003425605.1_01420
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1430293	1431078	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	8811	9596	GCA_003425605_1_1_1344	GCA_003425605_1_1_1344	-	1858630	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MFDSATNTIPKGNKSAGFLTSFELSNARFIGGFHQKEIKMTTQIQFSIFNFKNSPVRTITDPNSEIWFCGTDVCDILGYVNAPDAMKKHCKEAGIAKRYISYPSGRKEAIFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQLALPEPEKKFSFEFTEYELQQLVWLWFAFMRGIVTFQHIEKAFRVLGSNMSSQIYGQAYEYLSVLRSTNQILNRITSDFDIDQMTNWRVLKHLRGFNPKAVKIDF*	common_virus_hmm	common_virus	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0013	shell	direct	moderate	669	0.851	GCA_003425605.1_01422
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1431319	1432284	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	9837	10802	GCA_003425605_1_1_1345	GCA_003425605_1_1_1345	+	1858630	.	pfam10546	P63C domain. This domain was identified by Iyer and colleagues.	MVSTSLTAEKRKERAEKAALARWEHKKALEELPLAIHEGVLSIGDKSLDVAVLQNDLRIISSASVFEALDRPNRGSRGGAITENEELIKLPAFMDANNLKPFINQDVIDVIKGVKYRTKDGKIKEGYDATILPVVCDIYLRAREEGALVGKQQNTAQKAEILIRSLAKVGIVALVDEVTGYQDARAKDALAKIFEAFVAKELQPWVKTFPLDYYKELCRLYGVQFPPKNNNQFPQFFGHITNNAVYARLAPELLPELKKSASKQAKKVKLHQFLTEDVGHPKLREHLSSIVTLLKLSKDKDNFYEMLDKIHPKLTLQEGQE*	mmseqs_cdd	nonviral_gene	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0014	shell	direct	high	965	0.999	GCA_003425605.1_01424
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1432334	1432705	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	10852	11223	GCA_003425605_1_1_1346	GCA_003425605_1_1_1346	-	1858630	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MNIDVISVEFGYWATPRYETEFPRVAAGFAEMKCDARYAEKYRMRPISDELGMEIDGYLGVIRKVTPELYDVFVLTYIKRWEKQEIWRYLHISRREYFNRLKTVKTSLLLLLSTEGKQCLFIA*	phrogs_hmm	hypothetical_protein	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0015	shell	direct	high	371	0.997	GCA_003425605.1_01425
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1432736	1433401	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	11254	11919	GCA_003425605_1_1_1347	GCA_003425605_1_1_1347	-	1858630	.	PFAM:PF05551.10	homing-endonuclease	MKCKIDGCNREAMYKADCVCQMHYFRFMRNGTYDLLPKPIRKYRRHNGKGYQLIFEPRHQLAMSDGYVYEHRFVIYSIYQNNLPNCKLCGCKLTWSSCHIDHIDNDITNNTLENLRPICRACNVMRSHTLIPKYTHKGHSKITFNGLTMTAAEWARQDGVTVAGNTILRRIRDGWSIERALFETSSTHPNAAVKHTTTKYKNRFEVKSTGISLDLRLQGDD*	common_virus_hmm	common_virus	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0016	shell	direct	high	665	0.998	GCA_003425605.1_01426
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1433385	1433774	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	11903	12292	GCA_003425605_1_1_1348	GCA_003425605_1_1_1348	-	1858630	.	PFAM:PF05766.11	NinG-recombination-protein	MVRGHWLKALQKEVNKFIRLRDKGQPCIACGTVWKPSFQASHFIPQGRSSFLRFDERNIHSGCIRCNLFVGGGNIHGYRPRLVEKIGEQEVEWLEENQHRIKKWEISELKEMLKLYRLKNKELENEMQD*	common_virus_hmm	common_virus	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0017	shell	direct	high	389	0.997	GCA_003425605.1_01427
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1433728	1433949	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	12246	12467	GCA_003425605_1_1_1349	GCA_003425605_1_1_1349	-	1858630	.	pfam05766	Bacteriophage Lambda NinG protein. NinG or Rap is involved in recombination. Rap (recombination adept with plasmid) increases lambda-by-plasmid recombination catalyzed by Escherichia coli's RecBCD pathway.	MAKEYKCKVCGKAFVKTFSSTQKVCSPECAIKLVREQSRKRQKKAEKQEQIERKKRLLDGERALAKSSSKRGK*	mmseqs_cdd	common_virus	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0018	shell	direct	high	221	0.995	GCA_003425605.1_01428
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1434042	1434458	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	12560	12976	GCA_003425605_1_1_1350	GCA_003425605_1_1_1350	-	1858630	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPIDDKKPLVVKIQPITRSLEQNSKLHALLSDISKQCEFNGKKRDIDTWKMIMVSAHKIATGGQAEMVIGLEGEVINLRESTAQMSVKRLASLIEYITCWCVQNGVRFNDRWGL*	mmseqs_cdd	common_virus	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0019	shell	direct	high	416	0.998	GCA_003425605.1_01429
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1434495	1434719	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	13013	13237	GCA_003425605_1_1_1351	GCA_003425605_1_1_1351	-	1858630	.	.	hypothetical protein	MTSYKCPKCGAELEDFYTPDYFISSSEWDDDRFRCNGHLIEPIPFPQVSKYSAVNRTKSCGYFGLEDLGVEYKE*	.	hypothetical_protein	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0020	shell	direct	high	224	0.996	GCA_003425605.1_01430
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1434716	1435357	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	13234	13875	GCA_003425605_1_1_1352	GCA_003425605_1_1_1352	-	1858630	.	PFAM:PF06992.10	Replication-protein-P	MANSITQNQINTLPPERTQRAEETINWLFQELKSIFPGWRAAFETEADYLSAKKTWLRVLVREKITRPQLENGICEAEKSLDKFLPSVGLFVYWCKAYDYHALGLPNEAELYQRYNTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKAIPKLLTKAAEKVRSNFPFEDIPKMIPEKPSFYDKAKADKARDSLMAMMKGKGALQ*	rep_hall_hmm	common_virus	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0021	shell	direct	high	641	0.998	GCA_003425605.1_01431
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1435342	1436100	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	13860	14618	GCA_003425605_1_1_1353	GCA_003425605_1_1_1353	-	1858630	.	pfam13730	Helix-turn-helix domain. 	MSMRLMVQAMNCKVGNPARKLVLLKLADNANDDGICFPSYQYIADKCEMTRRSAINHIEYLIKMGLVSKKERKNKDGSISNLYFLHLEQGSENFALGSENISLGSENFALGGSENISPRTSHSLEPVNEPKKTTQKSEAEMLLEQFGITGQLAKDFIAHRKAKKGVINQTQLNRLQKQADKAGISICEAVEICIERNWQGFNASWDWRDEKLRPNSPHLGQSHRNKPKFDDTQTGWSAGMNFIVDGTQWQIP*	mmseqs_cdd	common_virus	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0022	shell	direct	high	758	0.999	GCA_003425605.1_01432
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1436097	1436798	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	14615	15316	GCA_003425605_1_1_1354	GCA_003425605_1_1_1354	-	1858630	.	PFAM:PF03374.13	KilA-protein	MANSLRNIQMNQLLTISKENTSTLTMSSREIAELINKNHSDLCRSIERLIAKEVIWGYQPMAYTHPQNGQTYYEYHLTKRDSLIVVAQNCPEFTAAIVDRWQALENQQKPTALIPQSFSEALMLAAQLQAEKERNAPKVAFVDHYVEVGTSKSFRETAKILKMPERALVNRLVEDKYLYRQSGVLLPYQSARTKDLFTVKTGTAEHGHNYTQTRVTSKGIEFIASRYASELML*	common_virus_hmm	common_virus	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0023	shell	direct	moderate	675	0.962	GCA_003425605.1_01433
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1436820	1437260	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	15338	15778	GCA_003425605_1_1_1355	GCA_003425605_1_1_1355	-	1858630	.	PFAM:PF06892.10	CII-like-transcriptional-activator	MEMKKVIIEMVDRIPGGRSAVAGFLGFTESELKNRLYQTKGQRFKNEELIAIQQEYGCTQFIDELCRLAGGRFVPDVAENELDKVELANLQLHELSARGLLFAALETALEDGEITSKEEDKIRQALSKHLAATQHSIECAIVLHKK*	phrogs_hmm	nonviral_gene	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0024	shell	direct	high	440	0.998	GCA_003425605.1_01434
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1437309	1437497	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	15827	16015	GCA_003425605_1_1_1356	GCA_003425605_1_1_1356	-	1858630	.	COG4197	DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily [Transcription]. 	MLPIEKAYEIVGGISAMARHFNLTPWAVSKWREKVPAERCAKIEELTDGKVKKSELRPDLWD*	mmseqs_cdd	nonviral_gene	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0025	shell	direct	high	188	0.995	GCA_003425605.1_01435
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1437608	1438306	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	16126	16824	GCA_003425605_1_1_1357	GCA_003425605_1_1_1357	+	1858630	.	PDB:2FJR_A	Repressor-protein-CI	MTDLASRLNELMAKQGKNIVDLQKAVGVTYEMARRYTLGTATPRDNKIEAIAKYFGVTPAHLKYGTVDSLENQVTSNVKDVGSFDLWDCNTPLNSDEYAVPFYQDIRLAAGNGFADDIADYNNFKLRFSKSTLRKQGVQYENAVCVIADGNSMEPVIPDGTTVGIDLGNKTIRDGKIYAINHGGLLRIKLLYNMPNEQVKIRSYNTEEHPDEIAELQDISVLGKVFWYSVLL*	common_virus_hmm	common_virus	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0026	shell	direct	high	698	0.999	GCA_003425605.1_01436
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1438358	1439437	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	16876	17955	GCA_003425605_1_1_1358	GCA_003425605_1_1_1358	+	1858630	.	.	hypothetical protein	MDIRLWRSIVRQRTLRALTSKEKKIRQRGGKPKYKHLAHKSFNLFEVIAPYKIILAKEIGYEFVAFKEELEEKAKLAARSRSRLKLNFRDTDIIDAAACSVLIAVLDTIKSQYRTLKFQIVRPKSKPADHRKHIPYDVDAIFCHIGLYKSLGFNYTSSSSQENVKCWHYVYSDSADGEITKPLLDELKSMGVKGIYPSYIEAIANAVEHAYAQNIYSEREFPIKRWWMLLAILEGKLSLFVCDLGHGIPNTLEKTQKANVLSAIWNRLKQLGKPTKDCLYIKASTLIKETRTGLGHRGKGGSDIRAFIDKTPGSRLIIRSNRGMYVYNGKDKPDLTKESRYSINGTVVQWNIPLQEIKE*	.	hypothetical_protein	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0027	shell	direct	high	1079	0.999	GCA_003425605.1_01437
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1439440	1439775	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	17958	18293	GCA_003425605_1_1_1359	GCA_003425605_1_1_1359	+	1858630	.	PF14213.6	STAS-like domain of unknown function (DUF4325)	MQTIYVKDFSQYPGPRYIKDGKASGEEFRDSILIPAIKRDPDIILNLDDTEGYGSSFLEETFGGAIRKGISPEVVLNLVKNLISNDDHDIIDEIKSYVEKEIEILSLKDNK*	hhsuite_tools	hypothetical_protein	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0028	shell	direct	high	335	0.997	GCA_003425605.1_01438
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1439772	1440203	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	18290	18721	GCA_003425605_1_1_1360	GCA_003425605_1_1_1360	+	1858630	.	.	hypothetical protein	MTLSDLIAFSALIVSIFALPISYILGARGLKNTAYNGELSKLSDLCDLVFTEALNIHKKTQSNLSDEMDYHLMIAFHKRLQSKCLEIKSLSNSERYPRMELREVKQAITDHLVSDNLEVRNTAMRGLIYKLDALKTFFTPKFI*	.	hypothetical_protein	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0029	shell	direct	high	431	0.998	GCA_003425605.1_01439
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1440517	1440687	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	19035	19205	GCA_003425605_1_1_1361	GCA_003425605_1_1_1361	-	1858630	.	COG3422	Uncharacterized conserved protein YegP, UPF0339 family [Function unknown]. 	MYFQIFQGVNNQWYWRLKAANHETIAVSEGYTTKQNCLHCIGLVMDTDRKTPIYES*	mmseqs_cdd	nonviral_gene	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0030	shell	direct	high	170	0.994	GCA_003425605.1_01440
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1440702	1440923	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	19220	19441	GCA_003425605_1_1_1362	GCA_003425605_1_1_1362	+	1858630	.	.	hypothetical protein	MQEEMKRYAISYHFDGKRWATDVYAHSFEEAEEKLKAMSQGTVDGEIHLSVYIPENPLSKVSRLITRIAKKFM*	.	hypothetical_protein	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0031	shell	direct	high	221	0.995	GCA_003425605.1_01441
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1441251	1441409	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	19769	19927	GCA_003425605_1_1_1363	GCA_003425605_1_1_1363	+	1858630	.	.	hypothetical protein	MEEKQEKSLSDKDKNLIKQAVLESADKNTNLTPSELAESVCSAVMFIDSYGR*	.	hypothetical_protein	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0032	shell	direct	high	158	0.994	GCA_003425605.1_01442
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1441387	1441554	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	19905	20072	GCA_003425605_1_1_1364	GCA_003425605_1_1_1364	-	1858630	.	.	hypothetical protein	MARDILKTNSQYLREVNEYVAEDIARFVSTLSSRLQESIDDSISSSDIFNAHKNQ*	.	hypothetical_protein	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0033	shell	ambiguous	low	24	0.143	GCA_003425605.1_01442
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1442190	1443461	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	20708	21979	GCA_003425605_1_1_1365	GCA_003425605_1_1_1365	+	1858630	.	.	hypothetical protein	MKTVKARLTELKNLINTKINEDYEWMGEIKSPEIIKEIEQLYPLIEKIEKSGKSLEISYAKYISLQLIKKIIRILNKKRASNKWDEYDVNSFILSLIKLRMTIKELYLIEVKGELRTEEELNAIAADISKAKLNLEEHISLEEQLVENKKEFENLKNSLITLKKSYNDAQEQITEISQWHEQSEKLSGDISNYEFTAQNNLTKITTLATTAETNKPQIEKYHEDIEGMIKLFNKQKEEIEMIIEDANRASMAGSFKTQSENIDSKMKAVDKILLGSLVATSVISLFNYSTSLSAADSLNILQFLAKSIVTIPLLVIAWLKAKERAYLFRLREDYNYKYSSAMAFEGYKKQVQEQDPKLHQQLLQIAVDNLGINPTKVFDKDLKSTPLETIIDGVGKRLDKAVDGIKGEVNDIPKKTKELIDDE*	.	hypothetical_protein	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0034	shell	direct	high	1271	0.999	GCA_003425605.1_01443
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1443799	1444050	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	22317	22568	GCA_003425605_1_1_1366	GCA_003425605_1_1_1366	+	1858630	.	COG3561	Phage anti-repressor protein  [Mobilome: prophages, transposons]. 	MTHLNLIPVFNGLIQNQPVQLCNARELHAFVESKQQYTDWIKNRINEYGFIQNEDYLVITERTNGRPRKEYHITLDMGKELRN*	mmseqs_cdd	common_virus	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0035	shell	direct	high	251	0.996	GCA_003425605.1_01445
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1444194	1444313	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	22712	22831	GCA_003425605_1_1_1367	GCA_003425605_1_1_1367	+	1858630	.	.	hypothetical protein	MNKLIITLVCAFVVYMAHALNLNQDCDGKICHAEQTQQY*	.	hypothetical_protein	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0036	shell	direct	high	119	0.992	GCA_003425605.1_01446
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1444355	1444744	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	22873	23262	GCA_003425605_1_1_1368	GCA_003425605_1_1_1368	+	1858630	.	PFAM:PF13591.5	DNA-binding-protein	MEPIKLSQKAEEEIVNAAKMAALSNLTEKSQNLITLEDIAIYFGRHYQTVAKIISKLPNFPKPVTVDQQNSRPRYIAGEVVRWGGSMLNILANRVIPPPPPYQGHNRHFVKSKYLYAQIFWLMSSHLLF*	phrogs_hmm	hypothetical_protein	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0037	shell	direct	high	389	0.997	GCA_003425605.1_01447
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1444629	1444985	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	23147	23503	GCA_003425605_1_1_1369	GCA_003425605_1_1_1369	-	1858630	.	PDB:1Z19_B	Integrase	MNEITPTKRGEKHEFNRLNRFLRHPVTDKYISDVSRIGDEELCFDIKSSVLDATFRKLKKLAEREYLHFHDTRREALTRLSKKVDVMTLAKISGHKDISILQNVYYAPDMAEVAELLD*	common_virus_hmm	common_virus	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0038	shell	direct	moderate	234	0.655	GCA_003425605.1_01448
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	CDS	1445420	1445512	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	23938	24030	GCA_003425605_1_1_1370	GCA_003425605_1_1_1370	-	1858630	.	.	hypothetical protein	MAAEKLTKKRLAQILIMLCILIIAFVWRYF*	.	hypothetical_protein	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_CDS_0039	shell	direct	moderate	92	0.989	GCA_003425605.1_01450
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	tRNA	646576	646651	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	617	692	tRNA-Lys	tRNA-Lys	+	1858630	.	tRNAscan-SE score: 87.4	Lys	NA	tRNAscan-SE	.	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	tRNA	646675	646750	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	716	791	tRNA-Lys	tRNA-Lys	+	1858630	.	tRNAscan-SE score: 71.8	Lys	NA	tRNAscan-SE	.	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	tRNA	667574	667644	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	21615	21685	tRNA-Trp	tRNA-Trp	+	1858630	.	tRNAscan-SE score: 47.0	Trp	NA	tRNAscan-SE	.	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_tRNA_0003	.	.	.	.	.	.
GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote	cenote	tRNA	696498	696560	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C34	50539	50601	tRNA-Undet	tRNA-Undet	+	1858630	.	tRNAscan-SE score: 23.9	Undet	NA	tRNAscan-SE	.	C34	51437	645960	697397	GCA_003425605.1|CP031679.1@region_645961_697397@tool_cenote_tRNA_0004	.	.	.	.	.	.
GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote	cenote	tRNA	1445238	1445320	GCA_003425605.1	CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605.1_CP031679.1	GCA_003425605.1|CP031679.1	GCA_003425605_1_1	GCA_003425605_1_1@C72	23756	23838	tRNA-Leu	tRNA-Leu	-	1858630	.	tRNAscan-SE score: 61.6	Leu	NA	tRNAscan-SE	.	C72	24030	1421483	1445513	GCA_003425605.1|CP031679.1@region_1421484_1445513@tool_cenote_tRNA_0001	.	.	.	.	.	.