core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	767982	768434	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	1	453	GCA_003425815_1_1_742	GCA_003425815_1_1_742	+	1840062	.	TIGR02805	tonB-system energizer ExbB, group 2. Members of this protein family appear to be the ExbB protein of an ExbBD proton-transporting membrane complex that, by means of TonB, energizes transport by TonB-dependent receptors. Note that this family represents one of at least two distinct groups TolQ homologs designated ExbB - see also TIGR02797. Each group associates with a distinct group of ExbD proteins, and a single species may have two ExbB/ExbD/TonB systems. [Transport and binding proteins, Cations and iron carrying compounds]	MVQLFDFLQQYSDYFIIGLLLLMSIIMLAMVIERYLFLRKVSVAHYSTIHALDIDLNRNMTVISTIGANAPYVGLLGTVIGILLTFYQIGHGGGDIDPSVIMLHLSLALKATALGILVAIPSMVFYNGLGRKVEVNRLKWKVLSEQKDKE*	mmseqs_cdd	nonviral_gene	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0001	persistent	direct	high	452	0.998	GCA_003425815.1_00778
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	768438	768881	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	457	900	GCA_003425815_1_1_743	GCA_003425815_1_1_743	+	1840062	.	TIGR02804	TonB system transport protein ExbD, group 2. Members of this family are Gram-negative bacterial inner membrane proteins, generally designated ExbD, related to the TolR family modeled by TIGRFAMs TIGR02801. Members always are encoded next to a protein designated ExbB (TIGR02797), related to the TolQ family modeled by TIGRFAMs TIGR02796. ExbD and ExbB together form a proton channel through which they can harness the proton-motive force to energize TonB, which in turn energizes TonB-dependent receptors in the outer membrane. TonB-dependent receptors with known specificity tend to import siderophores or vitamin B12. A TonB system and Tol-Pal system often will co-exist in a single bacterial genome.	MKKFDEINIIPFIDIMLVLLTVVLITASFISQGKIQVNVPKASTAVAFKSDELAKLLTVTADKQLYFNDKPISQEALEAEIAQWNKDQKVTLKIDAEASFQDFVTITDMLSKNEIKNVAIVSMKDKGKSAGENSQESTPSQSVPTTP*	mmseqs_cdd	nonviral_gene	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0002	persistent	direct	high	443	0.998	GCA_003425815.1_00779
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	768891	769685	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	910	1704	GCA_003425815_1_1_744	GCA_003425815_1_1_744	+	1840062	.	4G7X_B	Putative uncharacterized protein, TolA protein	MQQTKRSLLGLLISLIAHGIVIGFILWNWNEPSDSANSAQGDISTSISMELLQGMVLEEPAPEPEDVQKEPEPEPENVQKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKKKPKKEVKPQKKPINKELPKGDENIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAAYRSAIRREIESHKRYPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGDESLDKAALDAINVSRSVGTRPAGFPSSLSVQISFTLQ*	hhsuite_tools	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0003	persistent	direct	high	794	0.999	GCA_003425815.1_00780
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	769863	770369	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	1882	2388	GCA_003425815_1_1_745	GCA_003425815_1_1_745	-	1840062	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MAGINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERREVTEWHRIVFYRRQAEICGEYLRKGSQVYVEGRLKTRKWQDQNGQDRYTTEIQGDVMQMLGGRNQNAGGFSNEMGSSPQPSYQARQTNNGNSYQSSRPAPQQAAPQAEPPMDGFDDDIPF*	common_virus_hmm	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0004	persistent	direct	high	506	0.998	GCA_003425815.1_00781
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	770523	773354	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	2542	5373	GCA_003425815_1_1_746	GCA_003425815_1_1_746	+	1840062	.	PFAM:PF02463.18	RecF-protein	MENIDIRGARTHNLKNINLTIPRNKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDSIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPCCPDHDVPLTAQTISQMVDKVLSLPEDSKMMLLAPVVKNRKGEHVKILENIAAQGYIRARIDGEICDLSDPPKLALQKKHTIEVVVDRFKVRSDLATRLAESFETALELSGGTAIVAEMDNPKAEELVFSANFACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQYFDEDRVVQNPTISLAGGAVKGWDRRNFYYYQMLTSLAKHYHFDVEAPYESLPKKIQHIIMHGSGKEEIEFQYMNDRGDVVIRKHPFEGILNNMARRYKETESMSVREELAKNISNRPCIDCGGSRLRPEARNVYIGKTNLPIIAEKSIGETLEFFTALSLTGQKAQIAEKILKEIRERLQFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDAIRAADHIIDIGPGAGVHGGQVIAQGNADEIMLNPNSITGKFLSGADKIEIPKKRTALDKKKWLKLKGASGNNLRNVNLDIPVGLFTCVTGVSGSGKSTLINDTLFPLAQNALNRAEKTDYAPYQSIEGLEHFDKVIDINQSPIGRTPRSNPATYTGLFTPIRELFAGVPEARARGYNPGRFSFNVRGGRCEACQGDGVLKVEMHFLPDVYVPCDQCKGKRYNRETLEIRYKGKTIHQVLDMTVEEAREFFDAIPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKLATELSKRDTGKTLYILDEPTTGLHFADIKQLLEVLHRLRNQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGQIIATGTPEQVAKVESSHTARFLKPILEKP*	common_virus_hmm	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0005	persistent	direct	high	2831	1.0	GCA_003425815.1_00782
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	773875	777846	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	5894	9865	GCA_003425815_1_1_747	GCA_003425815_1_1_747	+	1840062	.	pfam02395	Immunoglobulin A1 protease. This family consists of immunoglobulin A1 protease proteins. The immunoglobulin A1 protease cleaves immunoglobulin IgA and is found in pathogenic bacteria such as Neisseria gonorrhoeae. Not all of the members of this family are IgA proteases, EspP from E. coli O157:H7 cleaves human coagulation factor V and hbp is a hemoglobin protease from E. coli EB1.	MTKAPMIDFSVVSRNGVAALVGDQYIVSVAHNGGYNSVDFGAEGPNPDQHRFTYQIVKRNNYKPDKDNPYHGDYHMPRLHKFVTDAEPAKMTDSMNGKNYADLSKYPDRVRIGTGEQWWRTDEEQKQGSKSSWLADAYLWRIAGNTHSQSGAGKGTVNLSGDITKPNNYGPLPTGVSFGDSGSPMFIYDAIKQKWLINGVLQTGNPFSGAGNGFQLIRKNWFYDNVFAEDLPITFLEPRSNGHYSFTSNNNGTGTVTQTNEKVSMPQFKVRTVQLFNGALKEKDKEPVYAAGGVNAYKPRLNNGKSIYFGDRGTGTLTIENNINQGAGGLYFEGNFTVSSENNATWQGAGVHVGEDSTVTWKVNGVENDRLSKIGKGTLHVKAKGENKGSISVGDGKVILDQQADDQGKKQAFSEIGLVSGRGTVQLNDDKQFDTDKFYFGFRGGRLDLNGHSLTFKRIQNTDEGAMIVNHNTTQVANITITGNESITAPSNKNNINKLDYSKEIAYNGWFGETDENKHNGRLNLIYKPTTEDRTLLLSGGTNLKGNITQEGGTLVFSGRPTPHAYNHLNRPNELGRPQGEVVIDDDWINRTFKAENFQIKGGSAVVSRNVSSIEGNWTVSNNANATFGVVPNQQNTICTRSDWTGLTTCKTVNLTDKKVIDSIPTTQINGSINLTDNATVNINGLAKLNGNVTLINHSRFTLSNNATQIGNIKLSNHANATVDNATLNGNVHLTDSAQFSLKNSHFSHQIQGDKDTTVTLENATWTMPSDTTLQNLTLNNSTVTLNSAYSASSNNAPRRRSLETETTPTSAEHRFNTLTVNGKLSGQGTFQFTSSLFGYKSDKLKLSNDAEGTYKLAVSNTGKEPKTLGQLTLVESKDNKPLSDKLKFTLENDHVDAGALRYELVKNNGEFRLHNPIKEQELRNDLVRAEQAEQTSKAKVRLRRAVLSDPLPDQSLLNALEAKQVEQTAETQTSKPKTKKVRSKRALREAFSDTPLDLSLLNALVEVKLEAINVQQQVGKERQTQEEQEKIQRKQKELISRYSNSALSELSATVNSMLSVQDELDRLFVDQAQSALWTNIAQDKRRYDSDAFRAYQQKTNLRQIGVQKALDNGRIGAVFSHSRSDNTFDEQVKNHATLTMMSGFAQYQWGDLQFGVNVGAGISASKMAEEQSRKIHRKAINYGVNASYQFRLGQLGIQPYFGVNRYFIERENYQSEEVKVQTPSLVFNRYNAGIRVDYTFTLTDNISVKPYFFVNYVDVSNANVQTTVNSTMLQQSFGRYWQKEVGLKAEILHFQLSAFISKSQGSQLGKQQNVGVKLGYRW*	mmseqs_cdd	nonviral_gene	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0006	shell	direct	high	3971	1.0	GCA_003425815.1_00783
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	778099	778242	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	10118	10261	GCA_003425815_1_1_748	GCA_003425815_1_1_748	+	1840062	.	.	hypothetical protein	MQFKLILSIVHKINLPILTLLYNSFYYQGIVQIHRKDLLGLFIFKNL*	.	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0007	cloud	ambiguous	low	3	0.021	GCA_003425815.1_00784
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	778239	778745	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	10258	10764	GCA_003425815_1_1_749	GCA_003425815_1_1_749	-	1840062	.	pfam02316	Mu DNA-binding domain. This family consists of MuA-transposase and repressor protein CI. These proteins contain homologous DNA-binding domains at their N-termini which compete for the same DNA site within the Mu bacteriophage genome.	MVFKMIREWYEIKNLLEVAGLATTVQGVTKKAKKENWQRRRVVGVKGNIFEYYVGDMPLAVQKALGFKPNEAKKEPLPAARVGERLKEIGRIMATISSLEAKVKELEEPTLDSLPDTLDQAEKRLVRWFRQCNKDRQAMLLSSAEVLADMSLKEQKESSEPLENCEVA*	mmseqs_cdd	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0008	cloud	direct	high	506	0.998	GCA_003425815.1_00784
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	779136	781016	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	11155	13035	GCA_003425815_1_1_750	GCA_003425815_1_1_750	+	1840062	.	PDB:1BCO_A	Mu-Transposase	MWIELKEILGLGGLPATLPGITKKAKLENWERRRKQGVKGNVYEYSFSSLPLEVQTEYLLKHSEELKVNKENNDSNQQTMIESAWNVLASATFEQEKRAERRFQAVVKVARLVENKIPLMKAFEQVVALYATDSDDETISKGSLKRGWYKVKTHPQGIWLPLLLDRTERDNSCRWADISDKAWAFFYADYLRKSKPKFSVCYYRLTLAAEENDWTIPSLSSLKRKFYNEFTEAEIALARGGEHELRELTAPQIRTVMDLEVYEIVNGDGYQHNVFVDWYEDGRPPIRPKTILMDNTRAASDKQTTQQRKRGKRQTAGIKIDGMFDRLGIKVIRTLVFKGRGNGRAKPIERAFKRDSLPAYVDGDARLEAFFTGWSVTEKTEDYQFKKGVNKALFLEVLEQGVRLWNDKAGRETELGQGIFSADQLWARDYAQTRQTFATEEQLRQLMMLGESTKVDKHGRFTLKAGYVLNNQKNVYEAQALIGGNIGNVIVRYDPDDLHGTVHIYDKNGVYLCDGECVEKVAFNSEEGARVQKRLINEQRRITKKMVDNHEKLSEHEMAQYRKQFEQSAADFVEPAEKQAFSWTQFADGNTVKTIKLDHELETETEEQNTLSFEQDLFNGLKQVQK*	common_virus_hmm	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0009	shell	direct	high	1880	0.999	GCA_003425815.1_00785
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	781043	781960	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	13062	13979	GCA_003425815_1_1_751	GCA_003425815_1_1_751	+	1840062	.	COG2842	Bacteriophage DNA transposition protein, AAA+ family ATPase  [Mobilome: prophages, transposons]. 	MTLTQQIQQILDSKTFMQRDIAQQSGISAGALSAYLKGTYAGNIDNIESALNNWLASQDKKQKVFVDAPHFIDIPTAKRVFGALDMAKLLPTMVTIYGASGVGKTKASQEYKKLNKNVWMITASPARATLSTILYELALELGINDAPRRKDRLSRMITKKLSGTQGLVIIDESDHLPYDALEEIRIIQEEADVGFALIGNDKVYTRIQGGVNQAHEYARLWSRIGNNCGIKHSTKADVKAVAQAWNLDTEDKELMNTLCDIGTKAGGLRALTQYLRLAAIAAKGKETVISLDLILQAKAHMQGVN*	mmseqs_cdd	nonviral_gene	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0010	shell	direct	high	917	0.999	GCA_003425815.1_00786
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	781960	782160	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	13979	14179	GCA_003425815_1_1_752	GCA_003425815_1_1_752	+	1840062	.	.	hypothetical protein	MKKYLLTLSLILTACTDVETCNLQCQKRANAEWKQEQGEFQPNLTPEQERYIVEWLVEHYPNGTQP*	.	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0011	shell	direct	high	200	0.995	GCA_003425815.1_00787
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	782182	782469	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	14201	14488	GCA_003425815_1_1_753	GCA_003425815_1_1_753	+	1840062	.	PFAM:PF07352.11	Mu-Gam-like-end-protection	MAKKATRIKTDTFAVRYQTRDEVEVAIKEIGDLNRELERLAIEQNDKLAAITEEYVPLMNAIKEKLSPKQDAVQAWCESRRDELTQNGKTAKRQN*	phrogs_hmm	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0012	shell	direct	high	287	0.997	GCA_003425815.1_00788
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	782426	782716	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	14445	14735	GCA_003425815_1_1_754	GCA_003425815_1_1_754	+	1840062	.	COG4396	Mu-like prophage host-nuclease inhibitor protein Gam  [Mobilome: prophages, transposons]. 	MNSRKTAKRQNGKTKTGSFNTGEVQWRQRPPSVGIRGAESVLESLRTLGLVRFIRTKEEVNKEAMLNEPELAATVAGVTIKTGVEDFVITPLEQEI*	mmseqs_cdd	nonviral_gene	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0013	shell	direct	high	290	0.997	GCA_003425815.1_00789
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	782812	783081	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	14831	15100	GCA_003425815_1_1_755	GCA_003425815_1_1_755	+	1840062	.	COG4382	Mu-like prophage protein gp16  [Mobilome: prophages, transposons]. 	MRSTKEKAIQLIHIAKHKLRMDELSYRMLLNELTGKNSTKQMTIMQLIKVLEAMENKVFKKTTKRHHSPTTENAKVNSLIAHKICSIWI*	mmseqs_cdd	nonviral_gene	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0014	shell	direct	high	269	0.996	GCA_003425815.1_00790
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	783082	783270	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	15101	15289	GCA_003425815_1_1_756	GCA_003425815_1_1_756	+	1840062	.	.	hypothetical protein	MSKQGLVRDGSENALNVWVRGVVNPILTAQNKPLALNVGALNDQMAGLVLERLKKWQARGNV*	.	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0015	cloud	direct	high	188	0.995	GCA_003425815.1_00791
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	783267	783803	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	15286	15822	GCA_003425815_1_1_757	GCA_003425815_1_1_757	+	1840062	.	.	hypothetical protein	MKLCRCPVCHSDIHLDQLEDDAGRELLGLITELKYGVARPLVSYIALFRPDKSALSNSRAIKLMREVLAMFPASQLSAHSLSETVNAVQKKRKESRNLAPLNNHRYLMQVMETNKPLFSGVGSAAINNEERKQAERLAENDEIENTILYIERFHQLGQPVEHLPGYEVWKKWKENQSK*	.	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0016	cloud	direct	high	536	0.998	GCA_003425815.1_00792
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	783930	784193	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	15949	16212	GCA_003425815_1_1_758	GCA_003425815_1_1_758	+	1840062	.	pfam08765	Mor transcription activator family. Mor (Middle operon regulator) is a sequence specific DNA binding protein. It mediates transcription activation through its interactions with the C-terminal domains of the alpha and sigma subunits of bacterial RNA polymerase. The N terminal region of Mor is the dimerization region, and the C terminal contains a helix-turn-helix motif which binds DNA.	MIVQTVEVAMLNATTEQIETFNEKAPEILADLAKHTEVKIKERIADIDPALAQQISVEVASQIAQSWGGEVIYIPPQSRVITKRTRP*	mmseqs_cdd	nonviral_gene	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0017	cloud	direct	moderate	236	0.894	GCA_003425815.1_00793
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	784475	784831	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	16494	16850	GCA_003425815_1_1_759	GCA_003425815_1_1_759	+	1840062	.	PFAM:PF10078.8	transcriptional-regulator	MKRTNFGEFIRGYRRTNKILLKQMADALGFSSAFLSSVENGNKPIPQGIEQKLVSNFNFSDEDKNSLFESIDTTRTQSTINIPQNTLDQMLIGAFCRNFNELDDTKKQELLNLLKGVK*	phrogs_hmm	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0018	cloud	direct	high	356	0.997	GCA_003425815.1_00794
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	784831	785364	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	16850	17383	GCA_003425815_1_1_760	GCA_003425815_1_1_760	+	1840062	.	PDB:3DTE_A	IrrE-protein	MSSIFYNDGFSVSPMSKKQIDSITQAIREIAAKCGWVDSNGAVDIVSLLEFGYEKFRIIPDHEMAGALGLTLPTGEILLRESVYNGACYGNGRDRFTVAHELAHGVLHKEQIGFARPVDHNTKIYCNAEWQANEFAGRLLLPDSCIKQHSGRSISEIAGLFQISYECAEIRISKYRK*	common_virus_hmm	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0019	cloud	direct	high	533	0.998	GCA_003425815.1_00795
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	785563	785703	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	17582	17722	GCA_003425815_1_1_761	GCA_003425815_1_1_761	+	1840062	.	.	hypothetical protein	MAMTTCSKCGRVCPLIFRWTREDPRTGAIIRAKHRPMPIPQCDCGR*	.	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0020	cloud	direct	high	140	0.993	GCA_003425815.1_00796
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	785790	785975	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	17809	17994	GCA_003425815_1_1_762	GCA_003425815_1_1_762	+	1840062	.	.	hypothetical protein	MIDEDILNIARKAWKKKDYNAARDFYQQVAYGYNYFTEPEKEAFTKEVSIFAVKTLRIRRF*	.	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0021	cloud	direct	high	185	0.995	GCA_003425815.1_00797
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	785996	786352	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	18015	18371	GCA_003425815_1_1_763	GCA_003425815_1_1_763	+	1840062	.	.	hypothetical protein	MLEKESLLQSKLTNIVKQDHGERGAELLRYVLYYADYRGEIIRKKAGRSYILELPKTLSFTENTSKSEPIEDSEKPLSIIQALKTGINKAKNEPTKPSDIIGLIIFLAIIWAVYKIFS*	.	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0022	cloud	direct	high	356	0.997	GCA_003425815.1_00798
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	786436	786987	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	18455	19006	GCA_003425815_1_1_764	GCA_003425815_1_1_764	+	1840062	.	PDB:1M0D_D	endodeoxyribonuclease-I	MSLSLPINKIVIHCSATKNGKSLRTTTQIAAQCIDEWHKQRGFKRSPVLAKQFNPHLQHLGYHYVIDTDGTVETGRMVGEIGAHVKGHNQYSVGICLVGGIDANGKNYGEYTEKQWIALHTLLQKLESEYPSARICGHRDLSSDINGDGSITPNEWIKDCPCFDVWTWLDSEQVINFDHLFRG*	common_virus_hmm	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0023	cloud	direct	high	551	0.998	GCA_003425815.1_00799
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	786990	787214	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	19009	19233	GCA_003425815_1_1_765	GCA_003425815_1_1_765	+	1840062	.	.	hypothetical protein	MGIALFLALILSLCFATVLIQDLDPLLGGAFLVGVICCLVVVFTMLSIEDTCQTYGKFSVGSTIYQCQQIQEGK*	.	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0024	cloud	ambiguous	low	3	0.013	GCA_003425815.1_00800
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	787211	787351	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	19230	19370	GCA_003425815_1_1_766	GCA_003425815_1_1_766	+	1840062	.	.	hypothetical protein	MSASIKLPRHKKLFTRGHKLSNNAKRNRAINGGRTAAQRFYVSWSY*	.	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0025	cloud	direct	high	140	0.993	GCA_003425815.1_00800
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	787354	787587	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	19373	19606	GCA_003425815_1_1_767	GCA_003425815_1_1_767	+	1840062	.	pfam10841	Protein of unknown function (DUF2644). This family of proteins with unknown function appear to be restricted to Pasteurellaceae.	MFFQLITNADGRLSTTAFIQFFGALLMAGILVFCVWLNRSYVPELFTTFAIFCGGGAATKGFANAMQSRNSQGGNND*	mmseqs_cdd	nonviral_gene	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0026	cloud	direct	high	233	0.996	GCA_003425815.1_00801
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	787580	787831	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	19599	19850	GCA_003425815_1_1_768	GCA_003425815_1_1_768	+	1840062	.	pfam10883	Protein of unknown function (DUF2681). This family of proteins is found in bacteria. Proteins in this family are typically between 81 and 117 amino acids in length.	MINVYIVGAAFAVLAGIFIHGRVQAAKIRKQQEEIEFVKREAAAVAQELENANTAKNITETNRTLSSKSVDEQLQSKGYFRED*	mmseqs_cdd	nonviral_gene	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0027	cloud	direct	high	251	0.996	GCA_003425815.1_00802
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	787997	788272	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	20016	20291	GCA_003425815_1_1_769	GCA_003425815_1_1_769	+	1840062	.	PFAM:PF10828.7	Rz-like-spanin	MAIGGAVWTYFWLTMDSSKTDVSDLRKAIENNEKSLSEVKGELRHLPTSKEVADLRLLMTEMKGKTDVLNTNIGSLNHQVKLLIEKEVNKE*	phrogs_hmm	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0028	cloud	direct	high	275	0.996	GCA_003425815.1_00803
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	788269	788574	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	20288	20593	GCA_003425815_1_1_770	GCA_003425815_1_1_770	+	1840062	.	5X11_E	Transcriptional regulator/DNA Complex	MMRQDIFTKDQRLVILRSLEECGYDANESILNDCLDMYGHDISRDLVRNHLLWLEEQGLITLTRLDNNGKDFFVATITQRGLDVAQGRAFVDGVKKPSPKI*	hhsuite_tools	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0029	cloud	direct	high	305	0.997	GCA_003425815.1_00804
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	788597	788716	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	20616	20735	GCA_003425815_1_1_771	GCA_003425815_1_1_771	+	1840062	.	PFAM:PF11985.7	terminase-small-subunit	MTDKNTRGRASKVDLLPPNIKTQLAMMLRDKQLSQAKIS*	phrogs_hmm	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0030	shell	direct	high	119	0.992	GCA_003425815.1_00805
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	788682	789167	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	20701	21186	GCA_003425815_1_1_772	GCA_003425815_1_1_772	+	1840062	.	pfam11985	Protein of unknown function (DUF3486). This family of proteins is functionally uncharacterized. This protein is found in bacteria and viruses. Proteins in this family are about 190 amino acids in length.	MINSFHKRKSLEEINDLIRDCGLDDSYQLSCTGLNRYASRMEQMASKIRNAREVAEIWTKQFGEAPQSDIGKLLMEIVKNLAFETSIGMSENGKAEPKDLALLSSAIQRLEQAESLSHKREQAIRKEMAQLAAETAEKVVVQAGLSADTVRAIKEQILGIA*	mmseqs_cdd	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0031	cloud	direct	moderate	365	0.751	GCA_003425815.1_00806
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	789167	790720	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	21186	22739	GCA_003425815_1_1_773	GCA_003425815_1_1_773	+	1840062	.	PDB:4IEE_A	Large-Terminase	MALLNNRPLNELAPECQSFLDCIHAFNPNELLLGYQKCWIADDSQLKIAEKTRRCGLTWAEAADNALIASMRKSDGGSDVFYIGSNKEMAREYIDAVAMWAKAFNYAAEEIQEEVFEDEDKDILTYVIYFASGFKVKALSSNPKNLRGMQGIVVIDEAAFHEYLAEVLKAALALTMWGAKVRVISMHNGVDNLFNELILDSSAGRKRYSVHTITIEDACHDGLYQRICQVTKQEWAAEKEQEWIENLLNDTASEEDALEEYFCVPKNGSGLWLSRALIERQMSEKTPVVRFEAKDGFSLVPEPTRYKEMNDWCEKTLAPILQNLSPNLLHFFGEDFARSGDMTSFVILAQQQNLTKQVQFIVELGNMPYKQQEQIVLFILKQLPRFSGGAFDARGNGGYLAESARDAFGSLIDCVQLSEKWYREHTAPFKAALEDGELEAIPKDADILADLRSFQVVKGVPRIPDKRAKSADGKSKRHGDTAIALLLAHYASRQLIQLPVKAHSRKPRASRKMTQGY*	hallmark_hmm	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0032	cloud	direct	high	1553	0.999	GCA_003425815.1_00807
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	790833	792140	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	22852	24159	GCA_003425815_1_1_774	GCA_003425815_1_1_774	+	1840062	.	PDB:5NGD_C	Portal-protein	MGRDISAYREVLSDSHVAGCVRRRKAAIKGLEWRITPTGNEKTDEILTALFERLPLPQIITEMLDAALFGYQVLEVMWENQNGLWLPAEVIGKPQEWFVFDEQNQLMLRDKENRNGKLVPEKKFLLTTQEANYTNPYGKPDLALCFWAATFKRGGFKFWLEFTEKYGSPWLVGKHPRQAQTHEIEDLLDSLEQMIGTAVAAIPDDSSISMLESASKGGSSQVFDEFLKYCKSEIAIALLGQNQTTEQESNRASATAGLEVTKEIRNEDITLVESGFNQLLNWICELNFNVETLPKFELYEQESIDKVQVERDQILSQMGVKFTAQYLHRTYGFEDGDIELTVNNTPKTAEFNEPTLPSNIADGVVEQLEMEGEPYVEDWMQTIKDRLSQAESLEDFRNQLDSLIPELNFAEYGELMAWASTTAFLAGRQSVVEEK*	hallmark_hmm	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0033	shell	direct	high	1307	0.999	GCA_003425815.1_00808
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	792141	793418	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	24160	25437	GCA_003425815_1_1_775	GCA_003425815_1_1_775	+	1840062	.	PFAM:PF04233.13	minor-capsid-component	MSKFTFQAQSRYFEKKLNLKTNSYLDVLGEEHDYFFVVAGANRNEVINAFREAVDQAIHHGETLESFRQRFDEIVEKTGWDYNGGRNWRTRIIYDTNVYGAYNRGRLQQHLDLADVMPYWEYQHNDNSHPRPEHVALDGTIRPATDPFWKYYYPIKAYGCHCTVIAHDEHDLKAMGKQVSPPVEIEYEDKLVGVRSGSPRLVTLPKGYDVGFAPYNFDDLSSSRNVEIDSILFQKLTTAEPRFASLLIQDVMKNTATVALLNHSMKEMVETVSNEKIARGKMKYVGVIHDEVIDKLTAMDKAPQTAVIAVRDEDVLHALRDTKQAKGINLPIEFWEQLPEKLRNPKAILFQPKESFNDKNAKDTLLFIYDTDHGKVAVKMDYEVKLRDQLTSKKFKANLNVVKTASVIDEDLKKLQKFDVLWGEL*	hallmark_hmm	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0034	shell	direct	high	1277	0.999	GCA_003425815.1_00809
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	793605	793793	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	25624	25812	GCA_003425815_1_1_776	GCA_003425815_1_1_776	+	1840062	.	.	hypothetical protein	MTELEERKKALELLPQFQGLTINEIISVLHWLQAYVQDYQRFEISNELVSHQEEIESSHDSV*	.	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0035	shell	direct	high	188	0.995	GCA_003425815.1_00810
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	793735	793932	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	25754	25951	GCA_003425815_1_1_777	GCA_003425815_1_1_777	-	1840062	.	.	hypothetical protein	MSNYEDNLLRNIFVAQVATLAKAIKAEKLAQGTRTTSDCYREAIIEIKRNREKILSLLDEIQAHY*	.	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0036	shell	direct	high	197	0.995	GCA_003425815.1_00811
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	793996	794496	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	26015	26515	GCA_003425815_1_1_778	GCA_003425815_1_1_778	+	1840062	.	PFAM:PF05069.12	virion-morphogenesis-protein	MIKITLNDTQALAKLHSIAQQLQHPRKLYGLLGETLKKIHADRFKAEVAPDGKKWQPLSSITRKIKGNDRILKQGGYLSQKTAYNYDDNRLEFGSDAKYARLHQFGGVIRSKKGKRLKFGKGSNTVYAKQSKIPARPWLGVNAQDEQKLLKKATALLQRQINQNLK*	hallmark_hmm	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0037	shell	direct	high	500	0.998	GCA_003425815.1_00812
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	794739	795842	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	26758	27861	GCA_003425815_1_1_779	GCA_003425815_1_1_779	+	1840062	.	PFAM:PF10123.8	head-maturation-protease	MNLIEIFKAGTRKDANGKEVTLTIEDLQQAVQSYNVEFHEAPAVIGHPQHNHPAYAWVKRLELDGDILKAEFDQIDPEFAEMVDKGRFKKVSASFYLANSQANPKQGSLYLRHVGFLGAMPPAVKGLRNPEFAEDEEGVVDFSDWTEATLWRRLRDWFIGKHGQEEADKVLPDYLVGSVQEEAVRNSLQPQKAESPIFNEPTQQQGEPEMSAEEKAELERLKAENQQLKDEKAQAEAQKAEAQLNQTKAENADFAESLVSVGKLAPVSKEKAIELLNCAAVQSAGGVVEFGEGENILTAIKAFLEAQPQIIQFGEVATKDNATTTEDNTVEYAEGTSAEAIDMDKRVRAYMKEHNVSYVTAFNAIHS*	phrogs_hmm	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0038	shell	direct	high	1103	0.999	GCA_003425815.1_00813
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	795861	796787	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	27880	28806	GCA_003425815_1_1_780	GCA_003425815_1_1_780	+	1840062	.	PFAM:PF03864.14	Major-Capsid-protein	MSDLSKHRVVDPVLTELAQGYYNGNMISEVLFPIAETQKEGGKIPTFGRLAFRLQTTKRELRAASNRLTPEDIGSLTVVLEENDIEYPIDIREVNEVEGVYPLRQYATGVTQDVIVLNREKACADLALNEDNYDASNKITLSGTSQFTDKNSDPISVIKAGIRAIKRATGRKPNICAISGDVWEVLSEHPKVLEKIKYVATAVLTPEDFAKLVKIDKVIIGEAVYEQSSELKDIWSKAIVLAYVAAASKEKKQNIYEPSYGYTVRRKNGLYVDTYTEVGGKVEIVRTTDINKPYIVGKAAGYLIKGCI*	hallmark_hmm	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0039	shell	direct	high	926	0.999	GCA_003425815.1_00814
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	796853	797116	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	28872	29135	GCA_003425815_1_1_781	GCA_003425815_1_1_781	+	1840062	.	.	hypothetical protein	MNKKMLYAVVGTMAILHNGKRYEKGDKIELTAEEAENLSLYIQLDQSELEKQKEERRLAEEKAEQERLAAEKAQKKTEEKTKEKADK*	.	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0040	shell	direct	high	263	0.996	GCA_003425815.1_00815
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	797116	797550	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	29135	29569	GCA_003425815_1_1_782	GCA_003425815_1_1_782	+	1840062	.	CDD:cd08053	head-to-tail-adaptor	MYISAQDLTEVLSERSLIELSNDHSRATEYNPLVLDKACQYATETVDGYLRSRYLLPLKSVPTIVRNICLQLARFWLYSRRPEGTGFPENVKDTYAQALKDLERIQSGKLHLGLEELNENGTNALDDVAKFKTRANKKIDLTGY*	hallmark_hmm	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0041	shell	direct	high	434	0.998	GCA_003425815.1_00816
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	797562	798059	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	29581	30078	GCA_003425815_1_1_783	GCA_003425815_1_1_783	+	1840062	.	PDB:2GJV_C	tail-completion-protein	MSATQPILNSIQTHLLSQIDRFAIELFPDNPSEYFLRDESGAILIQYAGSKFERINSTDIIQQRRTVTIALTVIARSQHNDDGALAILDQVRLAIVGFRPENCLACALINEEFAGEADGLWQYQLLVQTETWQVEQTKAVDLPKLANVYSRKPTDPLNPILQPKS*	hallmark_hmm	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0042	shell	direct	high	497	0.998	GCA_003425815.1_00817
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	798069	799454	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	30088	31473	GCA_003425815_1_1_784	GCA_003425815_1_1_784	+	1840062	.	PDB:3J9Q_Q	tail-sheath-tube	MAFHHGTETKRVTGGSVAVETVDGAIIGIVGTAPIGPLNELTLCQTKKDFAKFGTILNQGFTLPDAFDVIARYAAGQVYVVNVLDVSKHKSEIQDESITLDETTLLANTQKKGLLSLTLKSNSTPLTLNEDYWVDMQTGEIRLKVSKTSLTATYTYADPSKVTEEDIKGGIESSTGKRKGFELLRDGFNLYGADAKILICPEFDKTASCALALGTLAEQLKAVAYVQLPKGTSLSKAIQGRGPQGTINAKDSTERVRHFFPYALGSSNQLESLAVHAAGLRMKVDVEKGYRHSTSNHQLLGVIGMELPLTARIDDIQSETNRLNAVGITTIFNSFGTGFRLWGNRSSNYPTVTHIINFETALRTGDLIDESIRMVELQYIDRPIDDALIDSLTETVDTYLRALPSIVGYSLGLDYDYDLVDAFSKGQVPIKYDYTPKLPAERITNTSVMTRKYLVNLVSQK*	common_virus_hmm	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0043	shell	direct	high	1385	0.999	GCA_003425815.1_00818
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	799465	799983	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	31484	32002	GCA_003425815_1_1_785	GCA_003425815_1_1_785	+	1840062	.	PDB:5W5E_O	major-tail-protein	MSVAINQIINANVYMDGNSLLGKAKEFKLPDIEFEQIEHKGLGLVGTIKLPSGIAALEGEVTWDSFYPEVRAKAYNPMKNVQLMARSNLQVFDARGLVAEEPMVTIMNVSFSKTTGGSLKNKEATEHADTFQVHSIKQTVGGKEIFFYDAFANILRVNGQDVLQKYRTNIGQ*	hallmark_hmm	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0044	shell	direct	high	518	0.998	GCA_003425815.1_00819
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	800078	800353	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	32097	32372	GCA_003425815_1_1_786	GCA_003425815_1_1_786	+	1840062	.	PFAM:PF10109.8	tail-protein	MSLSNQIQIYRSIQLQFPIKDGEGKDITELKIRRAKVADIKQMSNFKGTDADKEIYMLSLLTGLVPEDFDAMDIADYAKVQAALADMQKGK*	phrogs_hmm	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0045	shell	direct	high	275	0.996	GCA_003425815.1_00820
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	800374	800514	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	32393	32533	GCA_003425815_1_1_787	GCA_003425815_1_1_787	+	1840062	.	pfam06528	Phage P2 GpE. This family consists of several phage and bacterial proteins which are closely related to the GpE tail protein from Phage P2.	MVADVAWWFGWNVSEIEQMTLDELSTWLEQANRQIKAGYSKSKATL*	mmseqs_cdd	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0046	.	unmatched_CDS	none	0	0	.
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	800530	800763	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	32549	32782	GCA_003425815_1_1_788	GCA_003425815_1_1_788	-	1840062	.	.	hypothetical protein	MKTTTSFDFLESLIVLSCVVGFGYTLYSFLTFAASQLDFVQIIFAVFIWVIAWQIIGAVLFFAYRLGSGRLFSKANK*	.	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0047	shell	direct	high	233	0.996	GCA_003425815.1_00821
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	800800	803013	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	32819	35032	GCA_003425815_1_1_789	GCA_003425815_1_1_789	+	1840062	.	PFAM:PF10145.8	minor-tail-protein	MSSNLAISLVIGASVGGAIAGIKNLRNSLKLFKDESQSVGSRMLGLGKNVALGTSSLISLGTAATTSMLAIAQPAIKFESAMADVKKVVNFDSPAQFKEMEQDILRLTRTIPMASEEIAAIVAAGGQAGIARENLLGYAEDAAKMGVAFEMAAGDAGTAMATMANVLGKLISEMAKFGDAINHLSDNANAKAADIVNVIARAGSDTRMLGLTENQAAALGSTFLSMGKAPEVAAQAIKGMSSAFAELKAGKHAKELQMLGLTPKSFAKAMNKDAQGAISDFIARIKKLPKDKQYPLLAKMFGKQYADDIMLLAQNTAEYNRQLGLLEERDENGNLKYMGSMQREFENRSATTENNLQLLKNSFNEIGIAIGAKLLPPINLLVNKLKPVIYNILEWMNANPELVNQFVQIGGGLVAIIGGFVALKTVLSLGLMAILPFWSGGKKLFSLFKFLTPVLMKLAYGFGYTFGLIAVGAFLIYEYWEPISAFFSTLWAEVTVIFDNVCQFVTNIWNDVQGIWSAVWDGVTNWFTGLWESINGLFNGNFTELGNIILAFNPLSLFQSIFSSVLNYFSVELPAEFTNFGKNIIDGLVNGIGNAWDSAKETVTELGTSVKNWFAEKLGIHSPSRVFMGFGENTVQGLAIGINKSLGLAEKASDEMSNAVGIFPHSDYQSLQTTFAQQQSEQAQHGGMTIHFNPTINVNGSSNNQVLNDVKEGLNISLREFETMLARVLDQQKRRAY*	hallmark_hmm	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0048	shell	direct	high	2213	1.0	GCA_003425815.1_00822
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	803013	803945	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	35032	35964	GCA_003425815_1_1_790	GCA_003425815_1_1_790	+	1840062	.	PFAM:PF06995.10	tail-protein	MYLMLGTIALEPIDITDFSEIQAARFAEHQVLKGKPRLQAMGESLAELNLSVRLHHKIGGVERRYQALLAAKAKQDALALIWGRGKFKGNFVITDIHSNTLFTDKYGNVLCRELTINLKEYVGELKNNLLGAALNIGKGSLLGSILPPEFFAGMNAAKEALTKGIDLYNQGKRIVDEVQNTIAIMKQFSQDPATALAYLPSVLGNLDGALGSFSELTGMSELFNGVRSVLPVVSEFSQEVAEIQSGLMAIQSDFQQGSSGSDWSEWFPSANRTMSEVAESFDFLAPRVAEMTAWIVLRNDDEVNNDTDRA*	phrogs_hmm	hypothetical_protein	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0049	shell	direct	high	932	0.999	GCA_003425815.1_00823
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	803926	804156	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	35945	36175	GCA_003425815_1_1_791	GCA_003425815_1_1_791	+	1840062	.	COG5004	P2-like prophage tail protein X  [Mobilome: prophages, transposons]. 	MTQTVLKHIVKQGERWDNLAYHYYGDALEYSRIIDANPHLSFYEVLPTGATVFISVLQVKPTNNEDMPPWLRGDNE*	mmseqs_cdd	nonviral_gene	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0050	shell	direct	high	230	0.996	GCA_003425815.1_00824
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	804149	805051	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	36168	37070	GCA_003425815_1_1_792	GCA_003425815_1_1_792	+	1840062	.	PDB:3CDD_F	tail-protein	MSNIAQPDFSLFYEKTNITADIEPHLIELSYTDYLEGQSDELVVQFEDISGKWIRAWFPTQGDKLKGAIGYKGEQLVDIGVFEIDEVEYQYRPSNITLRALSAGVSKNQRTLKPKAYEHTTLAQVIAVVAKRLKLKVAGEIKHIPIARITQYQERDLEFLARLGREYHHSFKVVNDQLVFTAKEKLGESESVLTIEEQDTISISLRDRISSTAKEVNISGYDANGKKVIKKSKKAKAKREDVSQAAKSSEDSLQIVTRGESQEQIDARGEAALAEQNDDQQSGTIKLWGNPKLVAGNTIL*	common_virus_hmm	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0051	shell	direct	high	902	0.999	GCA_003425815.1_00825
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	805046	805558	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	37065	37577	GCA_003425815_1_1_793	GCA_003425815_1_1_793	-	1840062	.	PFAM:PF05939.12	minor-tail-protein	MLTPTPKMNGGGGLGKETEKKSSTSFSNTVNMVAQGRPVPLTYGEILTGSLVISKGTKTFKADKVQFGDGYIQRASKGINNTLREFTVNYRSTWGVKTQNGKIAPVDTEALDELTEVEEFLKRHKGYKSFLWASYRKPNQGAPVKVVCESWTINRQQGYGSINMTFKETL*	hallmark_hmm	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0052	cloud	direct	high	512	0.998	GCA_003425815.1_00826
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	805512	805982	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	37531	38001	GCA_003425815_1_1_794	GCA_003425815_1_1_794	-	1840062	.	PFAM:PF06805.11	tail-assembly-protein-I	MRLEIYGGLKRFSNEFIVRGDKLKEGMSALLMQLGEFREQIQKGKFHVIVGNNKEKELSEETIYANFDEELTENTTLHIMPVIRGAKCLGFLQIVVGAVLIAASWWAGGAAGWSYLGASGFAGATAAFFCRCLHDFFGGSLNANPYPKNEWWWGIR*	hallmark_hmm	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0053	cloud	direct	high	470	0.998	GCA_003425815.1_00827
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	805994	806461	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	38013	38480	GCA_003425815_1_1_795	GCA_003425815_1_1_795	-	1840062	.	4TSD_B	HP1029	MIISSLTNPNFKVGLPKVITEVCDYLNTLDLNALENGRHDINDQIYMNVMEPETAEPSSKKAELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPCCVVNGKTEKIKKLVVKVPVKLI*	hhsuite_tools	nonviral_gene	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0054	persistent	direct	high	467	0.998	GCA_003425815.1_00828
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	806537	807055	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	38556	39074	GCA_003425815_1_1_796	GCA_003425815_1_1_796	-	1840062	.	cd04194	A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis  adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.	MINGNITLPFEYLDFSRHTIAAVLDPYVTRIGRPYKDKDYFNAGVLYFNMDKYQLGISSFSKELITLHIQLKESLIYGDQDILNYYFKEQWIPLDKRYNFQLDHMISFDSLDTSPNIFHFTGPHKPLDNIFSENVCVNAVISLFRLYASISWQDIYSLPLGTIRANWINQER*	mmseqs_cdd	nonviral_gene	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0055	shell	direct	high	518	0.998	GCA_003425815.1_00829
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	807411	809540	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	39430	41559	GCA_003425815_1_1_797	GCA_003425815_1_1_797	+	1840062	.	TIGR03591	polyribonucleotide nucleotidyltransferase. Members of this protein family are polyribonucleotide nucleotidyltransferase, also called polynucleotide phosphorylase. Some members have been shown also to have additional functions as guanosine pentaphosphate synthetase and as poly(A) polymerase (see model TIGR02696 for an exception clade, within this family). [Transcription, Degradation of RNA]	MNPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVVAKKDVKEGQDFFPLTVNYQERTYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFFNEIQVVATVVSVNPQISPDLVAMIGASAALTLSGVPFNGPIGAARVGFIDNQFVLNPTMAEQKQSRLDLVVAGTDKAVLMVESEADVLTEEQMLAAVVFGHQQQQVVIEAIKEFAKEAGKPRWDWVAPQPNTDLINKVKAIAEARLGDAYRITEKQLRYEQIDAIKADVIEQITAEDEEISEGKIVDIFTALESQIVRGRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSAIFTRGETQALAVATLGTERDAQIIDELTGERQDHFLFHYNFPPYSVGETGMIGSPKRREIGHGRLAKRGVAAVMPSLAEFPYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEEEKFVVLSDILGDEDHLGDMDFKVAGTREGVTALQMDIKIEGITPEIMQIALNQAKSARMHILGVMEQAIPAPRADISDYAPRIYTMKIDPKKIKDVIGKGGATIRSLTEETGTSIDIDDDGTVKIAAVDSNAAKNVMGRIEEIVAEVEAGAIYKGKVTRLADFGAFVAIVGNKEGLVHISQIAEERVEKVSDYLQVGQEVNVKVVEIDRQGRIRLTMKDLAPKQETEINQEDSVEEQE*	mmseqs_cdd	nonviral_gene	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0056	persistent	direct	high	2129	1.0	GCA_003425815.1_00830
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	809622	810566	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	41641	42585	GCA_003425815_1_1_798	GCA_003425815_1_1_798	+	1840062	.	PRK11189	lipoprotein NlpI; Provisional	MRCFRLSRHFIVYLFSLCAILLLAGCVQSRGGFVSKNHVVLSEQNPNTHFEQEVMIVRLSQVLLVGKMSNEERASLHFERGVLYDSLGLWGLARYDLTQALALQPKMASVYNYLGLYLLLEEDYDGALDAFNTVFELDSGYDYTHLNRGLNFYYVGRNHLAQQDFLQFYQADKKDPYRVLWLYLNEQKLKPQEAQTNLVERAKGLSEDFWGTHIVQYYLGHISVEELQQRASEFAENSQQYAEILTETYFYLAKQKLNVGLVDEAAALFKLAMANQVYNFVEYRFAAFELMKLKPVQTEDEKEEKSAVTKAIVF*	mmseqs_cdd	nonviral_gene	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0057	persistent	direct	high	944	0.999	GCA_003425815.1_00831
GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote	cenote	CDS	810686	812527	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C38	42705	44546	GCA_003425815_1_1_799	GCA_003425815_1_1_799	+	1840062	.	PDB:1OYW_A	ATP-dependent-DNA-helicase	MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLSGNDVLGMAQTGSGKTAAFALPLLAQIDPSEKHPQMLVMAPTRELAIQVADACEQFVKYAQGTRIVTLYGGQRYDIQLRALKQGAQVIVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENHQTALFSATMPEPIRRITKRFMNDPQEVKIKVNNENAPDIEQSCWYVHGVRKNEALLRFLEVEDFDAAIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLDIVVATDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLRNIEHLMKKGINEVELPNHLVLQECRRKKFVAKITKQLEHHDLEQYRSLLEDLFTADQDQEDIAAAMLMLLQGKQKLILPPDPPMEKRRRERNERGDRRENPRSAERRGERKGYGNPQPMDLYRIEVGRADGVEVRHIVGAIANEGDINSRYIGHIKLYDDYTTVELPQGMPKELLQQFGKTRVLNKQMQMSFLGAVKSDNSRGSDDFNGKRKGRGGDFRGERGRERGNDNRGNRKFNEKSNRTFSDKPRRDRRSSF*	common_virus_hmm	common_virus	C38	44546	767982	812528	GCA_003425815.1|CP031691.1@region_767983_812528@tool_cenote_CDS_0058	persistent	direct	high	1841	0.999	GCA_003425815.1_00832
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1474655	1475191	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	1	537	GCA_003425815_1_1_1393	GCA_003425815_1_1_1393	-	1840062	.	COG3101	Elongation factor P hydroxylase (EF-P beta-lysylation pathway) [Translation, ribosomal structure and biogenesis]. 	MEHKLEDIIAIFNQCFEEEYNTLLVKGGDEPIYLPANDEVPYNAIYFARGFYSSALHEIAHWLVAGKERRKLEDFGYWYEPDGRSEERQRDFEKVEVKPQALEWILATAAGFRYFASADNLNGNPGDTQPFKQAVYEQVKIYAEKGLPKRAEMLRHALAIFYGTEDRIDLSKFDVTRI*	mmseqs_cdd	nonviral_gene	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0001	persistent	direct	high	536	0.998	GCA_003425815.1_01459
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1475465	1476166	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	811	1512	GCA_003425815_1_1_1394	GCA_003425815_1_1_1394	-	1840062	.	PFAM:PF06152.10	minor-head-protein-and-DNA-pilot	MKRRGIDKPDDSSEFLVEVERPADKQGNREKTVGFKLPDGTIRVTDKGFDYNVGRLNYKPNLDLYPEKLAHAFAKVEMKGGEFKHDFELLAKRMAEMKQTLSPEGQKLTAEQMLQVRDSLTKNFKFAAGVLSAESKDLLKSKTGTVWLSDDTLIKQFNSRDGQDFGIDEYEALPDIINAPDKIVVDELGYQFYKDVNGKKQLAVLKVLSKEPEIFVQSFRLVSDKQWRKAFKE*	phrogs_hmm	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0002	shell	direct	high	701	0.999	GCA_003425815.1_01460
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1476338	1476814	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	1684	2160	GCA_003425815_1_1_1395	GCA_003425815_1_1_1395	+	1840062	.	PFAM:PF05840.12	nicking-at-origin-of-replication	MTKRGDQPICIEYEECEPNKYGEIRKKIVGVKNRFTEKKIITKLKNWVIKSAKSALGSTALNSETTETNKAHRAAWTCVNNCNRSKIEQQANLLMLPIGSPLKPSQIDLLMRHGRLRLNDYRWICCENDEVFIKEEKIPLAQAFGWGESLGDFRGNYY*	phrogs_hmm	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0003	shell	direct	high	476	0.998	GCA_003425815.1_01461
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1476768	1477130	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	2114	2476	GCA_003425815_1_1_1396	GCA_003425815_1_1_1396	+	1840062	.	.	hypothetical protein	MVGARAWGILGVIIINLGEIMKEKAVKPTIEPVSNFIKQKLNEDGFGRERIVAPLPANNASDKTFNDRIRYYFSVIEESFIESGLEPNVDYDFKDILSIARPLILAAIRKENLNFYWTTR*	.	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0004	cloud	direct	moderate	302	0.832	GCA_003425815.1_01462
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1477141	1477641	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	2487	2987	GCA_003425815_1_1_1397	GCA_003425815_1_1_1397	+	1840062	.	PFAM:PF03819.16	MazG-like-pyrophosphatase	MNKLIKNIEQWAEDRNLIKGSSINKQTLKMIEKFGKLCEGVAKGNINIIKDSIGDCFIVLTIINAQCRNESTETNANQSHLLEPTGHFRASSIDEALLRAAAKIGNFANQTTPPDDWDVNCLSNYLFLVSKMANLDFWDCVQHAYEQIKDRKGHMIDGVFVKEGDL*	phrogs_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0005	shell	direct	high	500	0.998	GCA_003425815.1_01463
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1477641	1477925	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	2987	3271	GCA_003425815_1_1_1398	GCA_003425815_1_1_1398	+	1840062	.	.	hypothetical protein	MITNEQVMEKLASIEDLLQKPVINEHSRELWTIDDVAKYFGFSMDHTRRNVIASPFFPAAVAISGRTGGKSKDLYVSGEVVSFCLKHKKRKARI*	.	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0006	shell	direct	high	284	0.996	GCA_003425815.1_01464
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1477956	1478957	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	3302	4303	GCA_003425815_1_1_1399	GCA_003425815_1_1_1399	-	1840062	.	PDB:1Z19_B	Integrase	MATIIKNGKRWRAQVRKFGVSKSATFLTQADAKKWAEMLEKQLESGKYNEIPDITLDELIDKYLKEVTVTKRGKREERIRLLRLSRTPLAAISLQEIGKAHFREWQNQRLKEVSPATVLRERSSLSALMAKAIEWDFITENPLKYLEKPKAPAPRTRRYDEHEIERLIFVSGYDVEHIEAPKTLQNRTGAAFLFAIETAMRAGEIASLTWNNINFEKRTAFLPITKNGHSRTVPLSVKAIEILQHLTSVKTESDPRVFQMEARQLDHNFRKLKKMAGLENANLHFHDTRREALTRLAEKVDVMVLAKISGHRDLSILQNTYYAPDMAEIAQRL*	common_virus_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0007	shell	direct	high	1001	0.999	GCA_003425815.1_01465
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1479407	1479829	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	4753	5175	GCA_003425815_1_1_1400	GCA_003425815_1_1_1400	-	1840062	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MARLSDWLTRKLTKGVYSHCEIAVMKEVFVSGHHYETEVMYECYSSSIRDGGVRCKQIDVYDREKWDLIELKGVTEAQIKAYFDRTLGCKYDWWGALGIVLGIKQKRSKYFCSEWCFNAICGGESGWRFSPNQLATIFQK*	phrogs_hmm	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0008	shell	direct	moderate	351	0.83	GCA_003425815.1_01466
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1479896	1480498	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	5242	5844	GCA_003425815_1_1_1401	GCA_003425815_1_1_1401	-	1840062	.	PFAM:PF14301.5	tail-fiber-assembly-protein	MKVYFFKDNLNNYQIFPPPQNINNVIEIEVKNESVLDNKQLVKNGNGYILVNKKPTELHIWNGNSWVIDEEKQTEIKRELIKRLVDSIDDTAANISSRWTRFAEEYKEREAAAIAFKAANYEGECSRYISDFAQRARLDNKTATNLILTQAAGLKKLQMELANQRMRKYELKHEALSDEELKNIHDDIIGKMQTLAESQQ*	phrogs_hmm	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0009	shell	direct	high	602	0.998	GCA_003425815.1_01467
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1480510	1482306	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	5856	7652	GCA_003425815_1_1_1402	GCA_003425815_1_1_1402	-	1840062	.	CDD:pfam07484	Tail-Collar-Domain	MADFNKPTVDSEYTQFPTEIRAAISAALSFLDGEHTNVPLKAKRWNPSTKIFEEYNGAQWVPMATEYKLPVDYNSLKNKPLPNSAVDDESDTKFASSAAVKTAYDKAAEAKEAASAKQSPATTLAGYGIGNFKVEQGQGDANGYKTDGNYYLASGQNLPENGEWHIEVVSGGATNAVRQIARKANDNKIKTRFFNGSNWSEWKDAGGDGVPIGAVVSFPRAVTNPVGFLKANGTTFNQQTFPDLYRTLGNHNQLPDLTRSDVGMTAYFAVDNIPAGWIAFDEIATQVTEQRYPELYRHLVGKYGSIASVPKVADRFLRNAGNGLSVGQTQEDEFKRHVHKHIENNTATNPRFYNDKTFDYGSRDSTDRASLDIATAVVDDNNDNWWITPNINSNFATGGDETRPKSLILKLCIKAKNTFDDVQFWVKAFGVVENAGALDAGTLAQNMQALSARVEQKIEENKQSTLREINNAKVDINQQFLQAKQDLSQIGTLKKVWEGNVNSGQITLSEKCFGKTLIFYLRLSEESNYDPNTTELVSFEVGAEDTGGGRLTSIREVIYNDLYRNTIPKEFTVYIAGDGKTINIGQIDNRYIKRIYIR*	common_virus_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0010	cloud	direct	high	1796	0.999	GCA_003425815.1_01468
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1482317	1485967	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	7663	11313	GCA_003425815_1_1_1403	GCA_003425815_1_1_1403	-	1840062	.	PFAM:PF13550.5	tail-protein	MQIVGRKGGGKGGGGGGRAPVEAPDSLKSCSYAKFIDVISCGEIEGPVNGLNSVYFGDVQLQDEKGKFNFNNVAIEWRPGSVRQAPSEICQTNEVTTDVNTEVKKDKPITRSIIAPEADIVRVTITVPGLSHQNKSNGDINGTKVELKVEYQANGSQWIDAGNIVIEGKTTSSYNREHSFRLTGEAPWNIKVTRLTDDSDSQVLQNKTIFSKITTVFEEKLTYPGVAYVGVQIDAEQFSSIPSRGYHCRGIKLKVPSNYNPETREYSGDWDGTFIVKYSNNPVWIYFDLLTNEEYGAGEYIKEDMLDKWSMYQIAKYCDELVPDGFGGREPRFTCNVYIQTKQEAFKLLRDLTSVFRAMSYWSSGTQMLVQDSPKEPIYQFNNTNVIGGKFSRSGSNIKTRHNVVLVTWNDPKKYFKQSVEYIEDSEAIVKMGYISQTEVVAFGCTSRGQARRLGKWLLYTEQYESEVITFSCGQDGAIPIPGEVIQVSDVHRSGERRGGRVKDGSTTNRIILDAEVEITKESTISIVNEKGELEQRAITQRGKLTEIDVRPVFTSVTENSTWIIASSDIKPEFYRVISIVESDDGSYTITASDYNPSKFEHIENGNELIEYDTTNNTLDTGVKNVVITDEIYRGLGGSIQTKIVVSYEPAKSLTSRYQIEYREGNGNWKQMEPTTLTSVDIPNVKDGVLYQIRIKTSNVLGVWSDNPIQNYEPIGRLRPPHNVSNLRHKAIAQEGAFLIWDLSPDIDLEYYEIKKGDTYESSKSVGKIKANEFNLGFIRAGEHKYWLSAVDSSDVRSESPTAVTFNISGGQVENLVAEIVGDEVLMTWGETKNNSFSTELYEVKKDDDVLALVKSTSFKFKADFNGNKKFTVTAIDLGGNRSESAQAQLIVHRPTPVSISQQVIDNYVMLRWQSAKATLPIVYYELRKGETIENSEFITNIDGLAFPQFETVGGLYKYWIIGVDSAGNRSEPQYTLSNVAQPPDYILKYDYNSSYDGIKNGSDKIDGKLYLPVRRDTWAEHFRSNNLATPKSQINRGFPLYLQPIDESGYYEEEMDYGTVLASSKITLTPKVISSGSYDINYHIAVKENAKDNWREHDQQSVYETNFRYVKFRITVSNAQKPVVIESLNLKLDQKQKTDGGTVQANASDIKGTWVNFATEFIDASVPVLTPQSKQPLFATSDFKDEPKPKGFYVFLFDKNGNRVSGKVGWVVKGV*	hallmark_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0011	shell	direct	high	3650	1.0	GCA_003425815.1_01469
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1485971	1486690	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	11317	12036	GCA_003425815_1_1_1404	GCA_003425815_1_1_1404	-	1840062	.	PFAM:PF06805.11	tail-assembly-protein-I	MDNSTANEQRTSCDIRKIRLKGELGKRFGKVHKLAVKTPAEAIRALCVLKRGFKEFLLESEKHGIVYRFLVQREELTTSSDEFQMRYGAQAEFHLIPVIRGSKRGGFFQLIAGAAMIGLAFWNPLGWATIGGTGFLSSAATLPLTIGASLVLGGISQLLVPVPKLSGPQERPENKPSYLFNGAVNTTEQGQPIPLLYGELIVGSAVVSAGLTDKEIPIRTNSTSNNETRGKLKFKRVSG*	hallmark_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0012	shell	direct	high	719	0.999	GCA_003425815.1_01470
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1486629	1487336	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	11975	12682	GCA_003425815_1_1_1405	GCA_003425815_1_1_1405	-	1840062	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MKHIDDAIAHAKQSYPHESCGFFVLKNGKLQYVACTNLAAETEDEFLIGIEDYARAEGVGEIRTVVHSHPDESCLPSIADQDAHKISGLEWCIIGLEGDEVSTHFMPALTEVPDLYGRKFIHGMTDCYGFVRDWYRQELGINLPNYNRIDGWWDNGGNLYVDNFEDAGFYPVKDLKIGDMIVMQINANVPNHAGVYLGDGLIGHHLYGRLSSKDVYGQFYRERTTHIMRHKENTP*	mmseqs_cdd	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0013	shell	direct	high	707	0.999	GCA_003425815.1_01471
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1487338	1487988	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	12684	13334	GCA_003425815_1_1_1406	GCA_003425815_1_1_1406	-	1840062	.	PFAM:PF05100.11	minor-tail-protein-	MSIYGQLQQYASHGWIELFELDLTKFGDIVYRFHDGLSPLGQAIVWQGLEYTPYPVKAEGFAVDGLNPVRPRITFSNLGGAITLVLAKLKGIEGARLTRKRTKIIYLDAVNFENGNLTADPNAHLPDDIFYISQKTSEDHLTVSFELLPATDLEGVKLPRRQIVAQYCTHKYKGQFCGYTGDKATCAKTLADCKAHFGEHSELPFGGFPSAAYMRI*	hallmark_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0014	shell	direct	high	650	0.998	GCA_003425815.1_01472
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1488150	1488248	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	13496	13594	GCA_003425815_1_1_1407	GCA_003425815_1_1_1407	-	1840062	.	.	hypothetical protein	MSNQTQLSKATIGLTDSQAGNGAQSISIISES*	.	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0015	shell	direct	moderate	98	0.99	GCA_003425815.1_01473
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1488725	1489258	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	14071	14604	GCA_003425815_1_1_1408	GCA_003425815_1_1_1408	-	1840062	.	pfam14020	Protein of unknown function (DUF4236). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 69 and 402 amino acids in length.	MAIKFRKTKKILPGVKLNISKSGVSVTTGIKGASINIGKNGVYRNLGIPGTGISKRDKLEFSSSKEEDYCYLDVLIDYVVDGQVVTLNVAITDYYPEKNAIWGYCEELEQESVFYLNDIQRVFDIKSGKDVEDVAEYFLQLNQSEDKEKSNDPPIGKILIVTFILFLIAYTFLFTKN*	mmseqs_cdd	nonviral_gene	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0016	shell	direct	high	533	0.998	GCA_003425815.1_01475
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1489320	1489664	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	14666	15010	GCA_003425815_1_1_1409	GCA_003425815_1_1_1409	-	1840062	.	PFAM:PF05939.12	minor-tail-protein	MAKERFKWKTLWGLSTETEPKVKEIKFGDGYSQRIQDGLNHIVSKATLTVRLNKRDKAAIDELESFLLRHGGYKSFEWLQPGKKTPILVVCRKWTSTDNGVYVDYDLPFEQVFN*	hallmark_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0017	shell	direct	high	344	0.997	GCA_003425815.1_01476
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1489665	1492043	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	15011	17389	GCA_003425815_1_1_1410	GCA_003425815_1_1_1410	-	1840062	.	UniProtKB:I0K2M4_9BACT	tail-tape-measure-protein-	MDQISNLKIKLEAETAKFTEEINKARNSLNGLGKTTGGINLTKLAIGGLAAAALSAAGALAAMYSSAMAGIELYAETERYLARTEAQLKATGAAVGFTSDELNDFAGSLAMNTLASVDGVRSAMSVMMTYRSVTGETFKTAIKLAQDLAEVYKTDVSSEARNLGRALESPAEAVSLLKRKGIELTETQKDLIQSFVESGEKAKAQEIILHELQKRVGGAGEAAASDTVAGALDTLGQATDELKEAFATSTGITDLYKASINKLAEAFLWLTKVMRGVDTKTHVDTLEKQIDVLEKSKKSLEEKAKSGIYGDGINDALAHTTKELEKARENLAKSRKELDAQEAESRKRQQEANEAKEKHERSERETAGASTLGKIEDKLKSRSEKLTAQYEKDKKALENLVLSEEEIRRRGFDNIDALRQSSLDKLTQSYNKELAELQKSEDKKSAVKSSSKTNDLARLDMAYADELQKITLAHQERIALIGKMAISERDAKERGFASALELRKHYLELENQAYEDAINKQKDKMRRDEYDKTEKVRSFFNDVRGSGNDPYVQNDITRENQLTKAQELYDQQLLSVQQFEEAKALIEDTYRQRKEDLDRQAVSSQLSMASSLFDGLAGLAEVAGGKQSGAYRTLFAISKSFQIAQSMLNLHAAVMKAMNDPTAVTPAQKFANMAAVAAQGAAVLQQIKSVTISGARANGGPVGGGRAYLVGERGPEIFVPGATGQITSNENLNKALGSGGGVNSVVINQTNNFDGNGADNAELARMVAAATKQQVYEVIRNESRPGGMMGGR*	hallmark_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0018	shell	direct	high	2378	1.0	GCA_003425815.1_01477
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1491985	1492290	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	17331	17636	GCA_003425815_1_1_1411	GCA_003425815_1_1_1411	-	1840062	.	PFAM:PF06223.11	Minor-tail-protein-	MLREMSVAEYFCWCKYFGKRPFTLELLDYGYGTVASAVYNVAALKQVVTAQDFSVLHTAKPNAEMTTEEMMDASIANDGVLRIGPDQQFKNQTRGRDGKIY*	hallmark_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0019	shell	direct	high	305	0.997	GCA_003425815.1_01478
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1492353	1492736	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	17699	18082	GCA_003425815_1_1_1412	GCA_003425815_1_1_1412	-	1840062	.	PFAM:PF06894.10	tail-assembly-chaperone	MLKKVKFELRDQVLVVSAISALDYLDYVDYLNSLDKPEPVSENDTEQELNSKLNKITRNNLMAHTRLIAISLSYDSDKSVDDLQKELLTTWTQADIFRVLEAVQDVCEFPQADPSESTQEDGEQKNA*	hallmark_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0020	shell	direct	high	383	0.997	GCA_003425815.1_01479
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1492742	1493242	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	18088	18588	GCA_003425815_1_1_1413	GCA_003425815_1_1_1413	-	1840062	.	PFAM:PF16463.4	tail-tube-protein	MAKNTTPTKGAGTMFYRLKDDKESTVIVNGTIKAADIKKPENWDRIAKIKELSPGEVTADSYEDNYLDDANADWKSTSQGAKSAGETTLTLAWLPGDTAQQALVSDFNTGKKKYYLVVYPNGVRDVYYAWVSSLGKTVPQNEVMTRTVKLTNVGKPLLAEYNEAGD*	hallmark_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0021	shell	direct	high	500	0.998	GCA_003425815.1_01480
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1493235	1493639	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	18581	18985	GCA_003425815_1_1_1414	GCA_003425815_1_1_1414	-	1840062	.	PFAM:PF06141.10	Minor-tail-protein	MKIHSKIRQAVIDALRPHLPKVKEFSNGKPSFTDIESQSPTVAVFISGVSPTGYLDGTMQATLHVACFMKSAAREDDLDKLTQEIYESGIVESSLTTLTENIAFTAFDYEQDDQMATWIAADLQYAITCEVDNG*	hallmark_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0022	shell	direct	high	404	0.998	GCA_003425815.1_01481
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1493636	1494181	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	18982	19527	GCA_003425815_1_1_1415	GCA_003425815_1_1_1415	-	1840062	.	PFAM:PF06763.10	minor-tail-protein	MAINDDIEKAKKALSDIDKKAVPQAMARTINNIAAKVMVRSVIETSKKVDVPKRLIKGRAKLERAKPRRLSAFIRVNRGNLPVIRLVTGGGRFVRRGENKGQLKIGNRLYPRAFVQKLKNGRVQVLQRQGKDRYPIDVVKIPLKTPLTESFNAEVKRAYEKDMPQELRTQLIRQIQIVVKK*	hallmark_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0023	shell	direct	high	545	0.998	GCA_003425815.1_01482
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1494181	1494486	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	19527	19832	GCA_003425815_1_1_1416	GCA_003425815_1_1_1416	-	1840062	.	PDB:2KX4_A	head-closure-knob	MSRSTLSPFDDALAQADKVISDVMMSVYVINGKKYKAVLDETPKEMEPMNGVYRTLTMFKSSSYKPKKGDKTTINGVDYVVTGFTFNSGTIMLQLEEDASY*	hallmark_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0024	shell	direct	high	305	0.997	GCA_003425815.1_01483
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1494467	1494790	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	19813	20136	GCA_003425815_1_1_1417	GCA_003425815_1_1_1417	-	1840062	.	COG5471	Predicted phage recombinase, RecA/RadA family [Mobilome: prophages, transposons]. 	MAKNYMQDGNTVRFTAAAAVKSGDVVMLENLAAIAVADVEKSAVGVGLTTGVFTVKAKAADDIKQGAIVYWSATEGATTTAGTNKRLGIAWHASGATVDTVDVKINA*	mmseqs_cdd	nonviral_gene	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0025	shell	direct	high	323	0.997	GCA_003425815.1_01484
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1494869	1496119	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	20215	21465	GCA_003425815_1_1_1418	GCA_003425815_1_1_1418	-	1840062	.	PDB:6WKK_D	Major-Capsid-Protein	MQAELNKRNADIKAVFAPFGTTHNDLLVECLGDLSITADQAKDKLLAKLGAGTTPSAAVTPYADNGNIVGDSVKQSLLARAGIDKDKVNAKDNAYNAMTLRELARASLADRGISVSGQNAMSMVGLAFTHSSSDFGQILIDVAHKSLLKGWETAAENFDQFTSRGTLTDFRAAKRVGLGDFGYLPQVGEGEEYTYGTIGDEGASVALATYGQLFSITRQAIINDDMHLLTKIPEKMGQAARATIAKLVFALLTGNAIAQDGKKLFDASHKNSFDNAALDVTNIDKAIQMMNGFVNTRGEPLAIEPDFMLLPTSLYTRAKQVLGSASVEGADINSGIINPIRDIVPTVKSARLQVANPKSWYLINKEAIEVSYLDGIDTPYMEQQQGFTVDGVSTKVRIDAGVNVIDYRGIVKVTNK*	hallmark_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0026	shell	direct	high	1250	0.999	GCA_003425815.1_01485
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1496166	1496876	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	21512	22222	GCA_003425815_1_1_1419	GCA_003425815_1_1_1419	-	1840062	.	PDB:1TG6_E	Putative-ATP-dependent-Clp-protease	MATSATKTNNQSWYSIKAKANDTAEISIYDEIGFWGVSAASFAQDLKDCGNNIKQINLHIHSPGGDVFDGIAIYNLLKNHPANVTVYIDGLAASMASVIAMAGNEVIMPENAMMMIHKPWGIQGGDAEDMRKYADLLDKVENTLIPAYASKTGKTPEELAEMLSAETWLNGKECVEQGFADKLAEPLVAMASIKSRKLEDFENMPKAMKDMLFKPQGNAGASAPQATPTPAQPGTN*	common_virus_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0027	shell	direct	high	710	0.999	GCA_003425815.1_01486
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1496848	1498371	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	22194	23717	GCA_003425815_1_1_1420	GCA_003425815_1_1_1420	-	1840062	.	CDD:COG5511	Major-Capsid-protein	MGILDKTIVAISPKWGAQRAKSRYVMNAYEAAMPSRTHKAKRESQGANVSTKQSAVSLREQARALDQNHDIVIGILDKMEERVIGSRGIHIEPQPMNLNGDVNETLAEQIRKKWAEWSIRPEVTGQFTRPELERMLLRTWLRDGEVFIQLVRGSVAGLNHSTKIAFSLEALEPDFVPMNTLDTANLIQGVELDAWRRPKSYRVYMDNPQENNRTYGRVKSVPAENMLHLAFKKRLHQLRGVSMLHGVIIRLADLKDYEESERVAARIAAAFTMYIKKGDAALYGDNEDYSADSPERDFEIAPGAIIDDLKPGEDIGLINSNRPNVNLETFRNGQLRATAAGTRSSYSSIARDYNGTYSSQRQELVESFEGYSVLQDTFVAHISRPIYREWLKMAIVSGEIDVPVDIDPASLYNAVYSGPVMPWIDPTKEAQAWKERIKGGLATESQAVRASGSNPAEVKRRRRVEVEENRKFGLKFDTDLTNTGTANDKTKNDSVAGGDGNERYKDE*	hallmark_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0028	shell	direct	high	1523	0.999	GCA_003425815.1_01487
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1498375	1498593	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	23721	23939	GCA_003425815_1_1_1421	GCA_003425815_1_1_1421	-	1840062	.	.	hypothetical protein	MIYDKDELEEKIRALDEKIENAQSQVSFNGRSVSYQVSEWTKQRDRYQQMLNELLAETRQRVKRHRIKYARF*	.	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0029	shell	ambiguous	low	3	0.014	GCA_003425815.1_01488
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1498590	1500710	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	23936	26056	GCA_003425815_1_1_1422	GCA_003425815_1_1_1422	-	1840062	.	CDD:COG5525	Large-Terminase	MFASAKDIRRDIANLLKPPRRMKVSEAVAEYMRVPVGGGNSVKWDKDTAAYMLDPMDCLNSREYDAVIFVGPARTGKTIGLIDGWITYAIICDPSDFLLVQLTQEKASEHSRKRLDRTFRCSPEIAKRLSPRKNDNNVHDKYFRAGNLLKIGWPSINVLSSSDYKYVALTDYDRWPEDVDGEGDGFSLASKRTTTFMSAGMTLVESSPGKDIVDIKHHPKTTHEAPPTTGILSLYNRGDRRRFYWQCPHCKEWFEPSMANMVGYRNDTDYVKASENARLQCPHCQSLVDPDKKRALNIGGKWLKEGQTIDKDGVIHGEGRNSRIASFWLEGPAAAYQTWAQLTYKLLTAEHEFEMTGSEETLKAVTNTDWGLPYLPRSALEQRRSDELMERREDTEKRTVPYGCRFLLAAVDVQGGRNRRFVVQIVGYGENSERWLIDRYNIKSSMRSNSEGESLPIDPSAYPEDWDLLISDVLNKQYRIEGLDGGVMPILAMAVDSGGEDGVTDNAYKFWRRCKRDGISKRVYLVKGDSTKRQKLISRTYPDNTSRSDRHAKARGDVPLYLLQTDQLKDRISNALSRETIGANYIHFPSWLGEWFFDELTYEERGQDGKWRKPGKGNNEAFDLFCYAHAIAILRGYERIKWGDEDNVPYWAKLPSVNPNVIRKESSAPEEAESAVEIEQVKPQPKPKPKSNWLNGGASKKKGGWL*	hallmark_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0030	shell	direct	high	2120	1.0	GCA_003425815.1_01488
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1500713	1501186	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	26059	26532	GCA_003425815_1_1_1423	GCA_003425815_1_1_1423	-	1840062	.	pfam07278	Protein of unknown function (DUF1441). This family consists of several hypothetical Enterobacterial proteins of around 160 residues in length. The function of this family is unknown. However, it appears to be distantly related to other HTH families so may act as a transcriptional regulator.	MDNLYDLKLNINQIAELVGMHRQTVSQRLAGLTPAIGSNSKLKLYALSDLIKIGLAEKMTADVDSLSPVERRAFWQAENERLKYERDTGELVPSFEVAQEMGFLAKAVVQSLDTLPDILERDCALTPTQLTRVIQVIDDVKSQMSLHIQAGDNKSEE*	mmseqs_cdd	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0031	shell	direct	high	473	0.998	GCA_003425815.1_01489
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1501463	1501852	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	26809	27198	GCA_003425815_1_1_1424	GCA_003425815_1_1_1424	-	1840062	.	.	hypothetical protein	MLTIKIIQDGVTSITESNSFVFYDETSREYKEMLRLADKLKEKPTTLNGIYYTQPMYGDQECKEVIREESIYCSARNNPTDKIIGMMIDFIPDDEHGDQGIEKEIAYSLIGTGDHIYVTNEQGKTVFNI*	.	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0032	cloud	direct	high	389	0.997	GCA_003425815.1_01490
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1502087	1502410	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	27433	27756	GCA_003425815_1_1_1425	GCA_003425815_1_1_1425	-	1840062	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MAKYIYMALGVVVVVLFGALRYQSGVIDELEITTKQQEKTIQQQEDANKSLSLALQQERDAVIAQQERNDEIERVATENAESVKTIIKTLPCAHTRLPQSVLDRLYK*	mmseqs_cdd	nonviral_gene	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0033	shell	direct	high	323	0.997	GCA_003425815.1_01491
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1502403	1503005	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	27749	28351	GCA_003425815_1_1_1426	GCA_003425815_1_1_1426	-	1840062	.	PDB:3WH1_A	Chitinase-	MTMMISEVTFNKIFPHAVKGVYQAISAQIEKAGCVTKMQQAMFLAQCGHESGGFTRFKENLNYSWLGLSKTFHKYFPDSLTAKKYERKPELIANRVYANRLGNGDEKSGDGWKYRGRGLIQITGKDNYAAFRKWLGRDIEPEDVASNLDLSVKTAIWYWQCCELAELNSVEKVTRRINGGLNGIDERCKLYRALMVTDNG*	common_virus_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0034	shell	direct	high	602	0.998	GCA_003425815.1_01492
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1502971	1503330	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	28317	28676	GCA_003425815_1_1_1427	GCA_003425815_1_1_1427	-	1840062	.	TIGR01594	phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]	MPIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPTIRYVLIDAAMCASIAGVAVPICTHLFGHTEYSSFLGTMIGFVGTEKIREFLFKFINRRIDKDDNDDFRSDIQ*	mmseqs_cdd	nonviral_gene	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0035	shell	direct	high	359	0.997	GCA_003425815.1_01493
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1503570	1504088	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	28916	29434	GCA_003425815_1_1_1428	GCA_003425815_1_1_1428	-	1840062	.	pfam06530	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	MRKFSELSELTIEQEEFVDRYMYQWGAWVRSGRLDKPQLNIIAKLMQSVIPAEPNEPICDDETGFMISQTIEMFFKKNDQILHFIVFAYYVNKRTINFIAEHLHGKSKAKEMRPCAGKSNVRVPSFRTIYREVEKEIHFAKAIIHELLITCFIIQRTSRERATNIKKIKITY*	mmseqs_cdd	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0036	shell	direct	high	518	0.998	GCA_003425815.1_01494
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1504089	1504634	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	29435	29980	GCA_003425815_1_1_1429	GCA_003425815_1_1_1429	-	1840062	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKVCGKAFVKTFSSTQKVCSPECAIKLARDNVQKAQERAEKKRQRERKAKLKSRSEWLKEAQSVFNKFIRLRDKNEPCISCGRYHQGQYHAGHYRSVGACPELRFCELNVHKQCAPCNDHKSGNIIEYRINLVNKIGADKVAWLERQDHEPKKYTIEDCKAIIKYYKTKIKELEE*	common_virus_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0037	shell	direct	high	545	0.998	GCA_003425815.1_01495
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1504634	1504726	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	29980	30072	GCA_003425815_1_1_1430	GCA_003425815_1_1_1430	-	1840062	.	.	hypothetical protein	MKRLNDDEILELKIVLLIAAVWVMFNMVFG*	.	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0038	shell	direct	moderate	92	0.989	GCA_003425815.1_01496
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1504723	1505142	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	30069	30488	GCA_003425815_1_1_1431	GCA_003425815_1_1_1431	-	1840062	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPIDDKKPLVVKIQPITRSLEQNSKLHALLSDISKQCEFNGKKRDIDTWKMIMVSAHKIATGGQAEMVIGLEGEVINLRESTAQMGVKRLASLIEYIQSWGVQNGVRFNDRWRFE*	mmseqs_cdd	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0039	shell	direct	high	419	0.998	GCA_003425815.1_01497
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1505179	1505400	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	30525	30746	GCA_003425815_1_1_1432	GCA_003425815_1_1_1432	-	1840062	.	.	hypothetical protein	MMKDFYIHRSEYHDGSTKGFRHGIKHKRHDCFRGDVRVLQRIDGKMVQISRVRKRFKTYEDAHAWARGLKCKE*	.	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0040	cloud	direct	high	221	0.995	GCA_003425815.1_01498
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1505397	1506320	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	30743	31666	GCA_003425815_1_1_1433	GCA_003425815_1_1_1433	-	1840062	.	PFAM:PF02384.15	DNA-methyltransferase	MSFEEHNNRKKANKFAEYITGESLRRYLAEKVEKYLGKNPSVFDGAAGSGQLEQFIQPSKFIAVEIQAESCAALANNYPDAEIHNTSFFLYQSEPKSDCVVMNPPFSLKFKELAEEEKAAIQADFPWKKSGVLDDVFMLKGLANAYRFGFFIMFPGIAYRNTEKTLREVIGNQLVELNLIQNAFEDTPISVLFLVVDKTKSNNKTYRELYDCATNKIINADEWLIDSDKWDTISPPEPPKEKIDPMKLELMSQAQLKEQIRAQIQFSGMVFDLERWPRKDFEKFCDEVCALIQEEKKSNRFLFGWGE*	phrogs_hmm	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0041	shell	direct	high	923	0.999	GCA_003425815.1_01499
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1506317	1506898	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	31663	32244	GCA_003425815_1_1_1434	GCA_003425815_1_1_1434	-	1840062	.	PFAM:PF05869.10	Adenine-specific-DNA-methyltransferase	MTEQQFDKNTWQTPCYVFEWLSQRFGWFDLDGCATANNALTCHYIGEPNSDNDEHQSIADDFLMPIEQMLDVLLDEVAERCSAPLRIYVNPPYSNVTPYLQRAKELCDAGYLVVMLLNNDKSTQWYQNHIQGVANEVIDITGGRIAFINPVTGKEIKGNSKGQMVVVFDPTMEDFVTRSISLDFIKKVGGYSK*	common_virus_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0042	shell	direct	high	581	0.998	GCA_003425815.1_01500
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1506895	1507530	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	32241	32876	GCA_003425815_1_1_1435	GCA_003425815_1_1_1435	-	1840062	.	PFAM:PF06992.10	Replication-protein-P	MANSITQDQINTLPPERAQRAEETINWLFQELKSIFPGWRAAFETEADYFSAKKTWLRVLAREKITRPQLENGLCEAEKSLDKFLPSVGLFVYWCKAYDYHALGLPNEAELYQRYNTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKAIPKLLTEAVEKVRLNFPFEDIPKMIPAKPSFYDKAKADKARDSLMAMMKGALQ*	rep_hall_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0043	shell	direct	high	635	0.998	GCA_003425815.1_01501
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1507515	1508273	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	32861	33619	GCA_003425815_1_1_1436	GCA_003425815_1_1_1436	-	1840062	.	pfam13730	Helix-turn-helix domain. 	MSMRLMVQAMNCKVGNPARKLVLLKLADNANDDGICFPSYQYIADKCEMTRRSAINHIEYLIKMGLVSKKERKNKDGSISNLYFLHLEQGSENFALGGENISLGSENFALGGSENISPRTSHSLEPVNEPKKTTQKSESEMLLEQFGITGQLAKDFIAHRKAKKGVINQTQLNRLQKQADKAGISICEAVEICIERNWQGFNASWDWRDEKLRPNLPHLGQSHPNKPKFDDTQTGWSAGMNFTVDGTQWQIP*	mmseqs_cdd	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0044	shell	direct	high	758	0.999	GCA_003425815.1_01502
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1508270	1508938	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	33616	34284	GCA_003425815_1_1_1437	GCA_003425815_1_1_1437	-	1840062	.	PFAM:PF03374.13	KilA-protein	MNQLLTITKENASTLTMSSREIAEITHKEHKNVLRVIRDLIEQNLVAQIEPLKFEYRNQWFDYYELNKRDTFVVVARLSPEFTAAVVDRWQELENQQKPTALIPQSFSEALMLAAQLQAEKERNAPKVAFVDHYVEVGTSKSFRETAKILKMPERALVNRLVEDKYLYRQSGVLLPYQSAHTKDLFTVKTGTAEHGHNYTQTRVTSKGIEFIASRYASELML*	common_virus_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0045	shell	direct	high	668	0.999	GCA_003425815.1_01503
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1508984	1509208	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	34330	34554	GCA_003425815_1_1_1438	GCA_003425815_1_1_1438	-	1840062	.	pfam15943	Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	MKLKEYLNQTERGEKAKLARFVGVKPPHITFWASGIRQVPAERCPLVEQFTKGKVTCEELRPDVNWAVLRNSDK*	mmseqs_cdd	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0046	cloud	direct	high	224	0.996	GCA_003425815.1_01504
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1509345	1510256	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	34691	35602	GCA_003425815_1_1_1439	GCA_003425815_1_1_1439	+	1840062	.	pfam00717	Peptidase S24-like. 	MRPIKEIRHDNLLLLIEEAGSTSELANKTGIAVSYLLQIKNKNAIQNGKPKGIGDKIAAKLEDGMNKPRGWLDKAHSAALVLPTQLHLADNIRFLMQKKGISDLTALAQSAHIDMLALTALMASPDEHQHTQTLQKLANFFIIDTQRLLYEDIALNPKGINFLKAKALPTHRVPIRGYTQLGPDAQWEEVDYPVGTGDGYILWPSRDQDVYALKCVGESMMPRIRHGEYVIIEPNHAVNNGDEVLVVTMDKKVMVKIFAYERDGMVLLQSINTAEFEAINLYRSDIDKMHYVAGIAKGSLVME*	mmseqs_cdd	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0047	cloud	direct	high	911	0.999	GCA_003425815.1_01505
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1510267	1511964	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	35613	37310	GCA_003425815_1_1_1440	GCA_003425815_1_1_1440	+	1840062	.	pfam10592	AIPR protein. This family of proteins was identified in as an abortive infection phage resistance protein often found in restriction modification system operons.	MSVIHVRQIATKITELFEGKVDISDIQDPQSNEGKSRCLTRYLAAYAVMNYAQTSEIDAANSLVDGYDDNGIDAFYYSAANKKIVIVQSKWNHNGNGQPGNGDVKKFTDGIRDLIDLQFERFNHKIQNKQHIIENAINSFDAKFDVVLIHTGNEAISIHNERTIQDLVDELNDAGDGTKENIMSFHYLSQAKIHASLAKGVEGDPINIDVGLTQWGKVDEPYYAVFGIVSGEEINSWYKQFGNRLFSKNIRKMLGFTDVNEEIKDTIQHNPEMFWFYNNGITLIADSVKKSIANGNNRDIGTFQLLNANIVNGAQTVSTIGQIDENLQSNLESVRIPIKIISLDRAPDNVGINITKANNRQNRIENRDFVSLDEHQIRLKTELSLDNVEYNISRIETFKTNDNAFDLSEATIALACASKQVSLAVQAKREIGKFYENVNKQPYTTIFNIGTTGRYVYIAVKCLRKIEQLIQDKISSLPKRSGKAYGTLIHGNRMLAYLVLKQINIHTLVQQNEIDLDLLTIPDKFNLAYEKLLNIIEHHYPDKVLGTLFKNATICKNIDTMFNQS*	mmseqs_cdd	nonviral_gene	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0048	cloud	direct	high	1697	0.999	GCA_003425815.1_01506
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1512239	1512409	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	37585	37755	GCA_003425815_1_1_1441	GCA_003425815_1_1_1441	-	1840062	.	COG3422	Uncharacterized conserved protein YegP, UPF0339 family [Function unknown]. 	MYFQIFKGVNNQWYWRLKAANHEIIAVSEGYTTKQNCLHCIHLVMDTNRNTPIYES*	mmseqs_cdd	nonviral_gene	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0049	shell	direct	high	170	0.994	GCA_003425815.1_01507
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1512424	1512645	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	37770	37991	GCA_003425815_1_1_1442	GCA_003425815_1_1_1442	+	1840062	.	.	hypothetical protein	MQDEMKRYAISYYFDGKRWATDVYAHSFEEAEEKLKAMSQGTVDGEIHLSVYIPENPLSKVSRLITRIAKKFM*	.	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0050	shell	direct	high	221	0.995	GCA_003425815.1_01508
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1512966	1513136	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	38312	38482	GCA_003425815_1_1_1443	GCA_003425815_1_1_1443	+	1840062	.	.	hypothetical protein	MEEKQENSLSDKDKNLIKQAVLESAAKNTSLTPLELAESLCKAFILIQADTCSKDE*	.	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0051	shell	direct	high	170	0.994	GCA_003425815.1_01509
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1513096	1513314	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	38442	38660	GCA_003425815_1_1_1444	GCA_003425815_1_1_1444	-	1840062	.	.	hypothetical protein	MKKSKADTLALMLTRDILGTPTQTQSSQMTEFSEYNAKELGAFIRTLSAELESLDENTDVIRLLSMYQPESK*	.	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0052	shell	direct	high	218	0.995	GCA_003425815.1_01510
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1513498	1513749	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	38844	39095	GCA_003425815_1_1_1445	GCA_003425815_1_1_1445	+	1840062	.	.	hypothetical protein	MKNKITDLNNHLFSQLEKLLDEDLTDEELNREIKRANAVSGIAANIIASNAISLKAMTLFENRQIERESPDFLRISKAQGDDL*	.	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0053	shell	direct	high	251	0.996	GCA_003425815.1_01511
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1513739	1514764	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	39085	40110	GCA_003425815_1_1_1446	GCA_003425815_1_1_1446	+	1840062	.	pfam10548	P22AR C-terminal domain. This domain was identified by Iyer and colleagues. It is found associated with pfam10547.	MTSNAERFKFTDEHIAFIRLHWDKKPSDLIKLFQQQFDLLINRNVFYKLKKKHNIPSLKHANRYSKEELAFIKANCTLNERILAQKMEVYFNKPFNPHALKVLRVKRQWLTGRSGRFEKGENLKPIGFERYCENAKCWLIKASIKRYERKSHYLWRKAGRKIPRGHIIDYKDGNSRNCTLENLELISRVEMAWRKKLQYHQLNDEIKPTFSAFVKLKEGINQRKKEKDMEENQSPNIATQEPTTFTFEFTEHELQTMAWAWFVLMRNMETFQALYPAMEKIGSSYAPSIYDQAYEYRPTIRDMHKIIERITSGFKFDQMTNWRILKRIRHFNPKKMEFLKI*	mmseqs_cdd	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0054	shell	direct	high	1025	0.999	GCA_003425815.1_01512
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1514815	1515156	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	40161	40502	GCA_003425815_1_1_1447	GCA_003425815_1_1_1447	+	1840062	.	.	hypothetical protein	MKRSKSAFFQEKQSFTHFMKGSEKWLTRISYFLAALVIALIVGGISLDANANPTDWHDNELSQQIQQEARCELKGGIYENGVCLPPNLTLATEKELQDYTAQKQAEINRTWSK*	.	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0055	shell	direct	high	341	0.997	GCA_003425815.1_01513
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1515156	1515344	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	40502	40690	GCA_003425815_1_1_1448	GCA_003425815_1_1_1448	+	1840062	.	NF033650	ANR family transcriptional regulator. ANR family transcriptional regulators include the AggR-activated regulator Aar. The name ANR (AraC Negative Regulators) refers to an effect on, rather than homology to, certain AraC family transcriptional regulators.	MRLTYKTYAESAVKAEKKGHYLETAKNWADAKRHTAVQKNIEYCQHRIDFCERHHFRLKSMS*	mmseqs_cdd	nonviral_gene	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0056	shell	direct	high	188	0.995	GCA_003425815.1_01514
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1515355	1515519	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	40701	40865	GCA_003425815_1_1_1449	GCA_003425815_1_1_1449	+	1840062	.	.	hypothetical protein	MKRTTLSPWQCDNPYDYYAQFETESIEQDEPEEDWREPEDADCEYWQSNCYGRG*	.	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0057	cloud	direct	high	164	0.994	GCA_003425815.1_01515
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1515522	1515665	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	40868	41011	GCA_003425815_1_1_1450	GCA_003425815_1_1_1450	+	1840062	.	.	hypothetical protein	MEETPRERLESKAELLNAIRNWLWQERITAEELQAEIEYIQRNPLPF*	.	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0058	shell	direct	high	143	0.993	GCA_003425815.1_01516
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1515675	1516175	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	41021	41521	GCA_003425815_1_1_1451	GCA_003425815_1_1_1451	+	1840062	.	PFAM:PF05565.10	resistance-protein	MKLYEITEQLENIKELLENPEFADNADIAKALDAVQQDFDKKAENVVYVIKNTEGDIEVIDAEIKRLQAMKKQRQNGIEQIKNYLKHNMEATGTAKINCPLFTISYRESKQSAVQLDEDLFLANNCDETLVNVKITANKTEIKARLKAGEEIPGAKLVDSQVLTIR*	common_virus_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0059	shell	direct	high	500	0.998	GCA_003425815.1_01517
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1516186	1516839	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	41532	42185	GCA_003425815_1_1_1452	GCA_003425815_1_1_1452	+	1840062	.	pfam04404	ERF superfamily. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to ERF.	MELQSANLSELMPELIQAISQLGNLSKDKQGYGYKYAELSKVLDTCRPILAEHNLVITQLVTVLNDEPTLVTTLFHKSGQFLRSCYPLVKAGVKQANDAQQVGAAITYARRYALTAMLFMAQEDDDAASVGKREQSSSPKSERPNNSNKSTQQAMSSTQANVTSKSVIEQLKDRLKGKTKKECGEIYDKSIVWLEEKHPDLVDEYNLMYNDYLLNLM*	mmseqs_cdd	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0060	shell	direct	high	653	0.998	GCA_003425815.1_01518
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1516849	1517283	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	42195	42629	GCA_003425815_1_1_1453	GCA_003425815_1_1_1453	+	1840062	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MARNTNTVILVGHLGSDPEIRQFQNGGQIATFNLAIGDDYRDKQGNTVKRTHWIPIVVHGNSADVARQYLQKGSKICVTGKLVQESWQDQNGNNRTALKVATQSFEMLDSKANNETQQPTKDKEKPDPLSAAAEQDRFNDDIPF*	common_virus_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0061	shell	direct	high	434	0.998	GCA_003425815.1_01519
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1517343	1517522	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	42689	42868	GCA_003425815_1_1_1454	GCA_003425815_1_1_1454	-	1840062	.	PFAM:PF16777.4	transcriptional-regulator	MKLSINEIKARSDEKRGVKSKSYKLPLATIAEIEQLSKQHDIPQNQLIIQAVELWKQSR*	phrogs_hmm	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0062	shell	direct	high	179	0.994	GCA_003425815.1_01520
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1517842	1518078	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	43188	43424	GCA_003425815_1_1_1455	GCA_003425815_1_1_1455	+	1840062	.	.	hypothetical protein	MNLLKSLARKILKEELENNKYHFEKLGNENLAKSRRIKELESDNDRLRIKVEQIRQDNLKLRENRPHFKHHKKKGGRK*	.	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0063	shell	direct	high	236	0.996	GCA_003425815.1_01521
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1518075	1518434	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	43421	43780	GCA_003425815_1_1_1456	GCA_003425815_1_1_1456	+	1840062	.	.	hypothetical protein	MNEINIKLPLHKFQTLIHRYVRDSLHDNGTPVLICIHDVKEYWAVLDSHTREKIKGEVKFFIKEYHHLRNDEFFKKDLAAWSELADWINENRSSPSTTATTAKPIVPVLPVINPKQRKK*	.	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0064	shell	direct	high	359	0.997	GCA_003425815.1_01522
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1518442	1519611	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	43788	44957	GCA_003425815_1_1_1457	GCA_003425815_1_1_1457	+	1840062	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MFTYGSICSGIEAVSVAWKGLGKPLWFSEIEPFPCAVLTYHYPNIPNLGDMTTLPEKILNREIPAPDVLVGGTPCQAFSIAGLRNSLDDERGNLTLMLIHILEAIDYVRYQDGKQPCILLWENVPGVLSTKDNAFGCLVGRLAGAFEPLQPPGGKWTGAGYVHSEMRNIAWRILNAKHFGLAQRRKRVFLVASARERSVAQILFERKSLQGHSQSCGKTQQVFTAYTESSFGAFSENTISGTLRQSGGSLGGGSETFVVHGTQDPIISTSTAHCLGRNNGQENVLFDISERRNTVRIYDEITPTLTAKMGTGGNNIPRINRQSIIRKLTPVECERLQDFPDNWTKIPYRNKSIEDCPDSPRYKAIGNSMAVPVIKWIRERLTNYLGERK*	common_virus_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0065	shell	direct	high	1169	0.999	GCA_003425815.1_01523
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1519608	1519850	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	44954	45196	GCA_003425815_1_1_1458	GCA_003425815_1_1_1458	+	1840062	.	.	hypothetical protein	MTAKQIRVGVSPITNQIFVGYVNKKGDTWTTKQDATMEILFAVAQHAMEFGEPIILSEETADGRFVKKYSITVKRIRGEE*	.	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0066	shell	direct	high	242	0.996	GCA_003425815.1_01524
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1519847	1520125	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	45193	45471	GCA_003425815_1_1_1459	GCA_003425815_1_1_1459	+	1840062	.	pfam04448	Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	MSKNNNGWIKCSERLPEPFDTSEELRNLSNRHLIYYTEDDVYWFIGFGWYLLDEKVDEEGGLIPYWQLDELGMIDIEIEVSHWQPLPQPPEE*	mmseqs_cdd	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0067	shell	direct	high	278	0.996	GCA_003425815.1_01525
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1520129	1520440	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	45475	45786	GCA_003425815_1_1_1460	GCA_003425815_1_1_1460	+	1840062	.	.	hypothetical protein	MNIEYEWLLINDLDDEDPEKEEVEKIIKDRVWLEFDRKKRPFYLESSVAEELFIRNHSDWECYEEDEYVFLAIREQGSERYSIFRVSPWYRLEPDVDEIYFDD*	.	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0068	shell	direct	high	311	0.997	GCA_003425815.1_01526
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1520570	1520770	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	45916	46116	GCA_003425815_1_1_1461	GCA_003425815_1_1_1461	+	1840062	.	PFAM:PF10013.8	excisionase-and-transcriptional-regulator	MEPTTRKLHNLKTVSSLLDMSAPTIYRRIKNDPNFPKPHLVGGNNFWTDAQINDYIERIESGCYSS*	phrogs_hmm	hypothetical_protein	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0069	shell	ambiguous	low	3	0.015	GCA_003425815.1_01527
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1520767	1522014	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	46113	47360	GCA_003425815_1_1_1462	GCA_003425815_1_1_1462	-	1840062	.	PDB:1Z19_B	Integrase	MAVLVKPLSITEINNAKPKEKDYSLSDGQGLFLLVRMNGSKIWRFQYYKPISKKRTLISLGVYPEISLKDVREIRDLYRSLLAKNIDPQDYRLQQEQKAIQERQFTLTEMGKEWLYLKKNEVDTGRLKEVTFIDIGKRLERHLFKVLGHYSISDISAPLAIEKLKPLERAGKLDTLHRIIGYLNQIMIYSVNRGVINYNATADIGRVFIRPIAENNPTIRPEQLPKLFEDLQNSTLEIETRCALELLLLTAGRAGAITQLEWENVDFENSLLNIPKEKMKGRQGKVQDFILPLSKQAVTILRLLQKLNRCNSKFVFPSKKNPRQPISKETPNKALGRIGYRNILTAHGLRSVFSTAMNEAEFNSEIIEVCLAHFEYSSVRGTYNKAKYMPQRIEYMQWWGDFVEEASDGKALMGC*	common_virus_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0070	shell	direct	high	1247	0.999	GCA_003425815.1_01527
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1522559	1523995	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	47905	49341	GCA_003425815_1_1_1463	GCA_003425815_1_1_1463	+	1840062	.	PRK05826	pyruvate kinase; Provisional	MSRRLRRTKIVCTMGPSTDRDNNLEKIIAAGANVVRMNFSHGTPDDHIGRAERVRSIAKKLGKTVAILGDLQGPKIRVSTFKDGKIFLNVGDKFILDAELPKGEGTQESVGLDYKTLPQDVVPGDILLLDDGRVQLKVLSTDGAKVFTEVTVGGPLSNNKGINKLGGGLSADALTEKDKADIITAARIGVDFLAVSFPRSSADLNYARELAQQAGLNAKIVAKVERAETVANDEAMDDIILASDVIMVARGDLGVEIGDPELVGVQKKLIRRSRQLNRAVITATQMMESMISNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMASVCLGAEKMPSINVSRHRMDKEFETIEESVAMSAMYAANHMKGVAAIVTLSSTGRTPLLMSRISSGLPIFALSRNQETLNLCALYRGVTPIYHGEESRTEAGAKAALQSLKEKGYLSTGDLVLVTQGGQGATQTNVCRTLIVE*	mmseqs_cdd	nonviral_gene	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0071	persistent	direct	high	1436	0.999	GCA_003425815.1_01530
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	CDS	1524137	1525543	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	49483	50889	GCA_003425815_1_1_1464	GCA_003425815_1_1_1464	+	1840062	.	PDB:3BGW_F	DNAB-Like-Replicative-Helicase	MASQPQIKSSDKKTAQVSIPPHSTEAEQAVLGGIMLSNQHWDGIAERVIADDFYTFQHRLIFTEMEHLMRNQSPIDLITLDQALRSRGVSDEVGGFAYLAELSNNTPNAINILAYADIVREKAILRELISVGNRIAENSYSPKGQDIKLILDEAEREVFAIAEKRTTSSEGPQNVINVLESTIEKIDILSKLENHSGVTGVTTGFTDLDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAAMASEKPVLVFSLEMPAEQIMMRMIASLARVDQTKIRTGQNLDEIEWNKIASVVGMFKQKNNLFIDDSSGLTPTDVRSRARRVYRENGGLSMIMVDYLQLMRAPAFSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRTLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSEDKGVAEIIIGKQRNGPIGRVRLKFNGQFSRFDNLAEQREYRDDY*	rep_hall_hmm	common_virus	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_CDS_0072	persistent	direct	high	1406	0.999	GCA_003425815.1_01531
GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote	cenote	tRNA	1522257	1522330	GCA_003425815.1	CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815.1_CP031691.1	GCA_003425815.1|CP031691.1	GCA_003425815_1_1	GCA_003425815_1_1@C80	47603	47676	tRNA-Val	tRNA-Val	-	1840062	.	tRNAscan-SE score: 70.7	Val	NA	tRNAscan-SE	.	C80	50889	1474655	1525544	GCA_003425815.1|CP031691.1@region_1474656_1525544@tool_cenote_tRNA_0001	.	.	.	.	.	.