core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	653527	653988	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	1	462	GCA_003425955_1_1_626	GCA_003425955_1_1_626	+	1904311	.	PRK10802	peptidoglycan-associated lipoprotein Pal. 	MNKFVKSLLVAGSVAALAACSSSNNDAAGNGAAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVSYGEEKPAVLGHDEAAYSKNRRAVLAY*	mmseqs_cdd	nonviral_gene	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0001	persistent	direct	high	461	0.998	GCA_003425955.1_00663
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	654422	654817	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	896	1291	GCA_003425955_1_1_627	GCA_003425955_1_1_627	-	1904311	.	PDB:1Z19_B	Integrase	MAIVTGDIAKSGRGRSLPLSDDAINLIKERMKYQVSPYVFHSGTGKLRDDISRRDFKRALQRANIKNFRFHDLRHTWASWHIQRGTPLMVLKELGGWETIEMVQKYAHLNADHLLSYVNQVKFSSNTRLAR*	common_virus_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0002	shell	direct	high	395	0.997	GCA_003425955.1_00666
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	654842	655447	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	1316	1921	GCA_003425955_1_1_628	GCA_003425955_1_1_628	-	1904311	.	PDB:1Z19_B	Integrase	MPIRKNKNGVWQIDFTTPSGERVRCSSKTTDKKLAQHLHDKLKHEAWQVEQLNKKPEKTVEQALILLLKDAEHKKDKLTKIQHAKYWRDEIGNKLLSSLTSEDIQNAIPTHVVRTGKILSPATQNRYRSSIMRAINLAKQAGWIDVVPYIAKNSEPKKRIRWITEKEAERLLDSLNLNWMKDVCQFALLTGARMTEILSMT*	common_virus_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0003	shell	direct	high	605	0.998	GCA_003425955.1_00667
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	655804	656241	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	2278	2715	GCA_003425955_1_1_629	GCA_003425955_1_1_629	-	1904311	.	.	hypothetical protein	MPNWCVGNLKIRGESADITHFLTECIEGCECDIDELGTLEIKNIREQEIKGARRVFCDNPNEIIEGYELENGYIVVIPISAAWVLSQPEMIELSKKFNVDFRFYGFELGQEFNQELEIIKGVLTLDKCIEFKNYIWECPMPYLGG*	.	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0004	cloud	direct	high	437	0.998	GCA_003425955.1_00668
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	656245	656514	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	2719	2988	GCA_003425955_1_1_630	GCA_003425955_1_1_630	-	1904311	.	.	hypothetical protein	MSENNGWINCANELPEPFSTDLEYRNATNKHLIYFTEDGDHWAVGLGWYLYDDKSDCEGCLIPYWESDENPGEEVEVIYWQPLPQPPEE*	.	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0005	shell	direct	high	269	0.996	GCA_003425955.1_00669
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	656619	656789	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	3093	3263	GCA_003425955_1_1_631	GCA_003425955_1_1_631	-	1904311	.	.	hypothetical protein	MSNEITQKVRITIEVEMDDYQRDQLKISKNTQVLGGNIVLLDWEGGVFDEVDGYCI*	.	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0006	shell	direct	high	170	0.994	GCA_003425955.1_00670
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	656779	657267	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	3253	3741	GCA_003425955_1_1_632	GCA_003425955_1_1_632	-	1904311	.	.	hypothetical protein	MKVLDEHILEYIWDETLDRIAQGTLVNYIGGSVGTYSDDHAEKRAEDFAILGVSQLIAGSGLSGSQFRRRVKKLMAQGVLLQRVGPNSFVINSEVVKNVAVQAARCWRSIGVPYGMDDTGRACKTLPINALPRSIFELKTNCYRILRSEYPSYKGKGVGNEQ*	.	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0007	shell	direct	high	488	0.998	GCA_003425955.1_00671
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	657316	658479	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	3790	4953	GCA_003425955_1_1_633	GCA_003425955_1_1_633	-	1904311	.	PDB:3ME5_A	Cytosine-specific-methyltransferase	MFTYGSICSGIEAVSVAWKGLSKPLWFSEIEPFPCAVLAYHYPNIPNLGDMTTLPEKILNREIPAPDVLVGGTPCQAFSVAGLRNSLDDDRGNLTLTLIHILEAIDYVRYQDGKQPCVLLWENVPGVLSTKDNAFGHFLAGLVQERQPLQPTGRKWTNAGLLHSARTVAWRTLNAQYFGLAQRRKRVFLVASARERSVAQILFERKSLQGYSQSCGKTQQGFTCYAEGSFGTYRQSVLGGLVKASGGALGGGSETIVVHGTQDPIISTSTAHCLGRNNGQENVLFDISDRRDVVRIQKDGTTPTLTARMGTGGNNIPCMSINQNIRKLTPSECEKLQGFPPGYTQISYRNKPAEDCPDSPRYKAIGNSMAVPVIKWIGERMINYLNK*	common_virus_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0008	shell	direct	high	1163	0.999	GCA_003425955.1_00672
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	658487	658846	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	4961	5320	GCA_003425955_1_1_634	GCA_003425955_1_1_634	-	1904311	.	.	hypothetical protein	MNEINIKLPLHKFQNLMISHVRYSLPRHTYIVSETIHDVKTYWSVLSSNTREVITRDINEHLKRWASDRNNAFHKLDYDSWEELFDWINENRSSPSTTATTAKPIVPVLPVINPKQRKK*	.	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0009	shell	direct	high	359	0.997	GCA_003425955.1_00673
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	658843	659088	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	5317	5562	GCA_003425955_1_1_635	GCA_003425955_1_1_635	-	1904311	.	.	hypothetical protein	MRLLKRLAEKVLIDDLRRLDKHIDKSIELHELKLRKLGELIKSLEAENNQLKRENATLETELRAIKQERIFSKRKKKSKRK*	.	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0010	shell	direct	high	245	0.996	GCA_003425955.1_00674
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	659085	659981	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	5559	6455	GCA_003425955_1_1_636	GCA_003425955_1_1_636	-	1904311	.	PRK00321	recombination associated protein; Reviewed	MYWFRNAIIYQLTKQIDFENIEKQLKECEFTPCGSADVSHFGWSAPLVTSENLAHQANGKILLVAKREEKILPVEVVNRELNKRITALEEKEQRKLKKVERSSLKDDVIATLLPQAFSRIKTTALYIDTLKQLIFVDAASSKTAEDALALLRKSLGSLLVVPLAFNCAPCEVMTRWVTDTAPDWLILRKEVEIREKEDLGVIHCKQKDVEDEEIIELVQNGLISKLALEWENNLKFVLIEDGTLKRLKFDDNITEQNDDIVKEDVTARFDVDFVLMASVLGKTVDSLIKEFGGIRDRL*	mmseqs_cdd	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0011	shell	direct	high	896	0.999	GCA_003425955.1_00675
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	660106	661074	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	6580	7548	GCA_003425955_1_1_637	GCA_003425955_1_1_637	-	1904311	.	.	hypothetical protein	MAEENKEIIAYKGFKQDWTCRGYQYEVGKTYEHKGNVKACESGFHACEYPLDVLSYYSPAVSKFAVVKMSGETSKDSDDTKIASAKITIETEINLPEMIKKAVEWIKGKVDWDAAKVSNTGNWSAATNTDDQSAATNTGDQSAATNTGYRSVATNTGDQSAATNTGYRSAATNTGYRSAATNTGYRSAATNTGYRSAATNTGYRSAATNTGYRSVATNTGYRSVATNTGYRSVATNTGDQSAATNTGDQSVAEISGKQSIAVALGWQSKAKASINGAIVCVYRNHDGELIHIKASTVGENNIKADTWYTLDEFGEFVEVKDD*	.	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0012	shell	direct	high	968	0.999	GCA_003425955.1_00676
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	661136	661570	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	7610	8044	GCA_003425955_1_1_638	GCA_003425955_1_1_638	-	1904311	.	PDB:1Z9F_A	Single-stranded-DNA-binding-protein	MARNTNTVILVGHLGSDPEIRQFQNGGQIATFNLAIGDDYRDKQGNTVKRTHWIPIVVHGNSADVARQYLQKGSKICVTGKLVQESWQDQNGNNRTALKVATQSFEMLDSKANNETQQPTKDKEKPDPLNAAAEQDGFNDDIPF*	common_virus_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0013	shell	direct	high	434	0.998	GCA_003425955.1_00677
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	661570	662220	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	8044	8694	GCA_003425955_1_1_639	GCA_003425955_1_1_639	-	1904311	.	PDB:3SZ4_A	Exonuclease	MEMYQLKAKCSGLADLMVKPKSGNGISATAKSAVRKIVKFDLFGYRDFEGNKYTEKGIALEERAIKLSGRKRGLPLKKNTERRENDWITGECDIYVPSRRLIIDTKCSWDIGSHPFFADEAEEKAKKAGYDAQMQGYMWLWDCSEAQIDFVLLPTPYDQLSSYDDPNRYIDLVEQPPQEKRITTVTIKRDEKVIEKIKERVEIAQEYYQQLIQEMR*	common_virus_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0014	shell	direct	high	650	0.998	GCA_003425955.1_00678
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	662195	663115	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	8669	9589	GCA_003425955_1_1_640	GCA_003425955_1_1_640	-	1904311	.	PFAM:PF03837.13	RecT-protein	MTNQVQHQQNKQPPALKTFFESANVQNKIKELVGKNAATFATSVMQIANSNAMLKTADPMSIFNAACMAATLNLPLQNGLGFAYIVPFRNNKEKKTEAQFQIGYKGFIQLAQRSGQFKRLVALPVYKKQLIKKDFINGFEFDWEQEPEQNENPIGYYAYFKLVNDFSAELYMSHDDIVKHAQRYSQTFKKGYGVWHDNFEAMALKTVTKLLLSKQAPLSVEMQQAVLADQAVVKDVENQEFNYTDNIQEAEFLAVVDEATFEQCKQSIANGETTLQELCDSGAYEFSQEQIAELEAIENGNVPTQS*	common_virus_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0015	shell	direct	high	920	0.999	GCA_003425955.1_00679
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	663128	663421	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	9602	9895	GCA_003425955_1_1_641	GCA_003425955_1_1_641	-	1904311	.	.	hypothetical protein	MKPYADHYAQLDAAHQRKVDWQAGYEIALDEVATEIDNDLKQGDQTHYHELTEMLCDNDNFWLAIGSGASYEPYRQEAIKKIAERELNDRMNDYDPD*	.	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0016	shell	direct	high	293	0.997	GCA_003425955.1_00680
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	663418	663762	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	9892	10236	GCA_003425955_1_1_642	GCA_003425955_1_1_642	-	1904311	.	.	hypothetical protein	MKHSKTPLRQEKQSFTHFMKGSEKWLNRICYFLAALIIAMIVGGISLHANAHPTDWHDNELSQQIQQETRCELKGGIYENGVCLPPNLTLAAEKELQDYTAQKQAEINRTWSKQ*	.	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0017	shell	direct	high	344	0.997	GCA_003425955.1_00681
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	663776	664513	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	10250	10987	GCA_003425955_1_1_643	GCA_003425955_1_1_643	-	1904311	.	PDB:5HFJ_C	Adenine-specific-DNA-methyltransferase	MKTELFNDHFQNYKRYHIPKAQLVIADIPYNLGNNAYASTPEWYVNGDNKNGESDKANSSFFDTDKDFRIAEFMHFCSKMLIKEPKERGKAPCMIVFCAFQQISMVIDYAKQHGFKNHIPLVFIKSSSPQVLKANMKVVGATEYALILYRDKLPKFNNNGKMIKNWFEWEKDNRKEIPKLHPTQKPIAVLKRLIEIFTDEGDVVIDPVAGSASTLRAARELNRPSYGFEIKKDSCKIAKEKMLNI*	common_virus_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0018	shell	direct	high	737	0.999	GCA_003425955.1_00682
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	664604	665635	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	11078	12109	GCA_003425955_1_1_644	GCA_003425955_1_1_644	-	1904311	.	pfam10548	P22AR C-terminal domain. This domain was identified by Iyer and colleagues. It is found associated with pfam10547.	MTSNAERFKFTDEHIAFIRLHWDKKPSDLIKLFQQQFDLLINRNVFYKLKKKHNIPSLKHANRYSKEELAFIKANCTLNERILAQKMEVYFNKPFNPHALKVLRVKRQWLTGRSGRFEKGENLKPIGFERYCKNAKCWLIKASIKRYERKSHYLWRKAGRKIPRGHIIDYKDGNSRNCTLENLELISRVEMAWRKKLQYHQLNDEIKPTFSAFVKLKEGINQRKKEKDMEENQSPNIATQEPTTFTFEFTEHELQTMAWAWFALLRGTELCQVLHPALKQIGSHYAASVYDIAYEYRSTLRHAHNVLTRITEQFECEQGNNWRVLKYLRAYDPKKTGFQLEIL*	mmseqs_cdd	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0019	shell	direct	high	1031	0.999	GCA_003425955.1_00683
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	665625	665876	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	12099	12350	GCA_003425955_1_1_645	GCA_003425955_1_1_645	-	1904311	.	.	hypothetical protein	MKNKITDLNNHLFSQLEKLLDEDLTDEELNREIKRANAVSGIAANIIASNAISLKAMTLFENRQIERESPDFLRISKAQGDDL*	.	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0020	shell	direct	high	251	0.996	GCA_003425955.1_00684
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	666008	666283	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	12482	12757	GCA_003425955_1_1_646	GCA_003425955_1_1_646	-	1904311	.	.	hypothetical protein	MWIFQNTFASTETQRHVKPLRMIDEVCFEMVTIKQTRLKMEEKQENSLSDNDKELIKQAVLESAAKNTNFPPDKLAKSICDAIYLIDSYKH*	.	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0021	shell	direct	moderate	159	0.576	GCA_003425955.1_00685
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	666493	666714	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	12967	13188	GCA_003425955_1_1_647	GCA_003425955_1_1_647	-	1904311	.	.	hypothetical protein	MQDEMKRYAISYYFDGKRWATDVYAHSFEEAEEKLKAMSQGTVDGEIHLSVYIPENPLSKVSRLITRIAKKFM*	.	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0022	shell	direct	high	221	0.995	GCA_003425955.1_00686
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	666729	666899	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	13203	13373	GCA_003425955_1_1_648	GCA_003425955_1_1_648	+	1904311	.	COG3422	Uncharacterized conserved protein YegP, UPF0339 family [Function unknown]. 	MYFQIFKGVNNQWYWRLKAANHEIIAVSEGYTTKQNCLHCIHLVMDTNRNTPIYES*	mmseqs_cdd	nonviral_gene	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0023	shell	direct	high	170	0.994	GCA_003425955.1_00687
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	667260	667427	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	13734	13901	GCA_003425955_1_1_649	GCA_003425955_1_1_649	+	1904311	.	.	hypothetical protein	MKEKFKLWLISLNCELINDLGIDEIVSRVDDRLEVIIANKEERVVLEDLIKCFNS*	.	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0024	shell	direct	high	167	0.994	GCA_003425955.1_00688
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	667455	668375	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	13929	14849	GCA_003425955_1_1_650	GCA_003425955_1_1_650	-	1904311	.	pfam12686	Protein of unknown function (DUF3800). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 215 and 302 amino acids in length. There is a DE motif at the N-terminus and a QXXD motif at the C-terminus that may be functionally important.	MLCLLLIPGPDHFRLGFRVFGIKIMSKTYIVYLDEFGHIGPYLSSTHPKHNTHPAFGLGGFVLPINAVRPFSSFFFELKLKLFENFDIKQAKEKARSKGERFQLSTWEKKGSKQYSVINLKKYKQLIVESTSRIINRITSKGGFLFYVGEAKFRNPEQHNPQEVYKSSLTEIIKRLDDEFHSEEAHFLIFMDDSEGSADLVKRSIYEMHQNGRYQLIEAPMQVDSELYQTIQCADWLCAIYGKIAYYQIEPEAKPDYELFVRYFGDKIARAQKRSNVRNNLPKPASKEKLLKLKDKFDNRCCKYSK*	mmseqs_cdd	nonviral_gene	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0025	shell	direct	moderate	849	0.922	GCA_003425955.1_00689
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	668578	669279	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	15052	15753	GCA_003425955_1_1_651	GCA_003425955_1_1_651	-	1904311	.	PDB:2FJR_A	Repressor-protein-CI	MKTLGERVKARRMELGITQKELGDLVGISQNSITKIENGGNTIHIAKLASALGVSVAWLSIGVGDRDDDIVDNSGLDKQLVSSEPDLLHKHRIDYYDVRAAAGLNGFENSDYPEIISSLFLTDEGIAQLVGKKSADGICLVNVPTDSMDPTIRKGDIVFLDTKVNAYCGDGIYAFAIDGALFIKRIQKMIGGGYRMISDNEIYPPEQISDDVCENAKFIGRFIRTIHIEAVNL*	common_virus_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0026	shell	direct	high	701	0.999	GCA_003425955.1_00690
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	669431	669643	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	15905	16117	GCA_003425955_1_1_652	GCA_003425955_1_1_652	+	1904311	.	COG4197	DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily [Transcription]. 	MNKTILKAIKIFKSQQALAAACGVSQNAVSKWLNGGSISLENALKIEKATNGKVKAEMFSKEFSSLLARN*	mmseqs_cdd	nonviral_gene	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0027	shell	direct	high	212	0.995	GCA_003425955.1_00691
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	669717	670424	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	16191	16898	GCA_003425955_1_1_653	GCA_003425955_1_1_653	+	1904311	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MTNLIPISNNHISGNEVKTVNARELHLFLDVSTRFSDWIQRRISEYGFVENQDFVVLLKNEKNPIGGRPSREWFISIDMAKELSMVERNEKGKQARQYFIEMEKVAKNQQKPTALIPQSFSEALMLAAQLQAEKERNAPKVAFVDHYVEVGTSKSFRETAKILKMPERALVNRLVEDKYLYRQSGVLLPYQSARTKDLFTVKTGTAEHGHNYTQTRVTSKGIEFIASRYASELML*	common_virus_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0028	shell	direct	high	707	0.999	GCA_003425955.1_00692
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	670421	671179	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	16895	17653	GCA_003425955_1_1_654	GCA_003425955_1_1_654	+	1904311	.	pfam13730	Helix-turn-helix domain. 	MSMRLMVQAMNCKVGNPARKLVLLKLADNANDDGICFPSYQYIADKCEMTRRSAISHIEYLIKMGLVSKKERKNKDGSISNLYFLHLEQGSENFALGGKNISLGSENFALGGSENISPRTSHSLEPVNEPKKTTQKSEAEILLEQFGITGQLAKDFIAHRKAKKGVINQTQLNRLQKQADKAGISICEAVEICIERNWQGFNASWDWHDEKLRPNSPHLGQSHRNKPKFDDTQTGWSAGMNFIVDGTQWQIP*	mmseqs_cdd	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0029	shell	direct	high	758	0.999	GCA_003425955.1_00693
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	671164	671799	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	17638	18273	GCA_003425955_1_1_655	GCA_003425955_1_1_655	+	1904311	.	PFAM:PF06992.10	Replication-protein-P	MANSITQNQINTLPPERAQRAEETINWLFNELKSIFPGWRAAFETEADYLSAKKTWLRVLAREKITRPQLENGLCEAEKSLDKFLPSVGLFVYWCKAYDYHALGLPNEAELYQRYNTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKTIPKLLTEAVEKVRSNTPFEDVPKMIPEKPSFYDKAKADKARDSLMAMMKGALK*	rep_hall_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0030	shell	direct	high	635	0.998	GCA_003425955.1_00694
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	671796	672020	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	18270	18494	GCA_003425955_1_1_656	GCA_003425955_1_1_656	+	1904311	.	.	hypothetical protein	MTSYKCPKCGAELEDFYTPDYFISSSEWEDDRFRCNGHLIEPIPFPQVSKDSVVNRTKSCGYFGLEDLGVECKE*	.	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0031	shell	direct	high	224	0.996	GCA_003425955.1_00695
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	672057	672473	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	18531	18947	GCA_003425955_1_1_657	GCA_003425955_1_1_657	+	1904311	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPIDDKKPLVVKIQPITRSLEQNSKLHALLSDISKQCEFNGKKRDIDTWKMIMVSAHKIATGGQAEMVIGLEGEVINLRESTAQMSVKRLASLIEYITCWGVQNGVRFNDRWGL*	mmseqs_cdd	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0032	shell	direct	high	416	0.998	GCA_003425955.1_00696
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	672566	673111	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	19040	19585	GCA_003425955_1_1_658	GCA_003425955_1_1_658	+	1904311	.	PFAM:PF05766.11	NinG-recombination-protein	MAKEYKCKVCAQPFVKTFSSTQKVCSPECAIKLARDNAQKAQERAEKKKQRERKDKLKSRSEWLKEAQSVFNKFIRLRDKDQPCISCGRHHQGQYHAGHYRSVGACPELRFCELNVHKQCAPCNDHKSGNIIEYRINLVNKIGADKVAWLERQDHEPKKYTIEDCKAMIKYYKTKIKELEE*	common_virus_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0033	shell	direct	high	545	0.998	GCA_003425955.1_00697
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	673112	673621	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	19586	20095	GCA_003425955_1_1_659	GCA_003425955_1_1_659	+	1904311	.	pfam06530	Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	MRKFSELSELTIEQEEFVDRYMYQWGAWVRSGRLDKPQLNIIAKLMQSVIPAEPNEPICDDSTGMMISEVIERFFLKNDRTLHYIVFSYYVNKSTINHIAVKLRENCGEIKMQPCAGKPDIRIPSLKTMIRNVEKELKLAKAIIHELLVTGFVILRTGRQNARNIKITY*	mmseqs_cdd	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0034	shell	direct	high	509	0.998	GCA_003425955.1_00698
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	673879	674130	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	20353	20604	GCA_003425955_1_1_660	GCA_003425955_1_1_660	+	1904311	.	PFAM:PF16082.4	holin	MLKDAGSQSIFWSGFGAFWAMYSFQEWLAIMGLIIGLISGLVNMYAKYQEGKVRKNEERRAEEIHHVRMKRLYLGFDDDFDKN*	phrogs_hmm	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0035	shell	direct	high	251	0.996	GCA_003425955.1_00700
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	674111	674653	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	20585	21127	GCA_003425955_1_1_661	GCA_003425955_1_1_661	+	1904311	.	CDD:cd16901	P1-lysozyme	MILTKTRKALGVCSVITVMGLMYAQFGGELRLSPVGAEIIGNAEGCRRDPYQCPADVLTVGIGSTEYGGKKINPKHRYTDLEIAERWKNDIVIAERCVNKYGNGEMLPQSVFDSAVSITFNVGCGAVSKSTMFKYLRAKQYEKACGEFPRWVYASGKKLAGLVVRREKEKALCLADLKLP*	common_virus_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0036	shell	direct	high	542	0.998	GCA_003425955.1_00701
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	674626	674961	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	21100	21435	GCA_003425955_1_1_662	GCA_003425955_1_1_662	+	1904311	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MFSRFETAIKLTALCLILGLCGWTWFQSQKISSLKAENQAQAQTIQQQEDANKALAITLQQERDAVIEQQERNNEIERIATENAESVKTIIKTQPCAHTRLPQSVLDRLYK*	mmseqs_cdd	nonviral_gene	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0037	shell	direct	high	335	0.997	GCA_003425955.1_00702
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	675425	675898	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	21899	22372	GCA_003425955_1_1_663	GCA_003425955_1_1_663	+	1904311	.	pfam07278	Protein of unknown function (DUF1441). This family consists of several hypothetical Enterobacterial proteins of around 160 residues in length. The function of this family is unknown. However, it appears to be distantly related to other HTH families so may act as a transcriptional regulator.	MDNLYDLKLNINQIAELVGMHRQTVSQRLAGLTPAIGSNSKLKLYALSDLIKIGLAEKMTADVDSLSPVERRAFWQAENERLKYERDTGELVPSFEVAQEMGFLAKAVVQSLDTLPDILERDCALTPAQLTRVIQVIDDVKSQMSLHIQAGDNKSEE*	mmseqs_cdd	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0038	shell	direct	high	473	0.998	GCA_003425955.1_00703
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	675901	678021	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	22375	24495	GCA_003425955_1_1_664	GCA_003425955_1_1_664	+	1904311	.	CDD:COG5525	Large-Terminase	MFASAKDIRRDIANLLKPPRRMKVSEAVAEYMRVPVGGGNSVKWDKDTAAYMLDPMDCLNSREYDAVIFVGPARTGKTIGLIDGWITYAIICDPSDFLLVQLTQEKASEHSRKRLDRTFRCSPEIAKRLSPRKNDNNVHDKYFRAGNLLKIGWPSINVLSSSDYKYVALTDYDRWPDDVDGEGDGFSLASKRTTTFMSAGMTLVESSPGKDIVDIKHHPKTTHEAPPTTGILSLYNRGDRRRFYWQCPYCKEWFEPSMANMVGYRNDTDYVKASENARLQCPHCQSLVDPDKKRALNIGGKWLKEGQTIDKDGVIHGEGRNSRIASFWLEGPAAAYQTWAQLTYKLLTAEHEFEMTGSEETLKAVTNTDWGLPYLPRSALEQRRSDELMERREDTEKRTVPYGCRFLLAAVDVQGGRNRRFVVQIVGYGENSERWLIDRYNIKSSMRSNSDGESLPIDPSAYPEDWDLLISDVLNKQYRIEGLDGGVMPILAMAVDSGGEDGVTDNAYKFWRRCKRDGISKRVYLVKGDSTKRQKLISRTYPDNTSRSDRHAKARGDVPLYLLQTDQLKDRISNALSRETIGANYIHFPSWLGEWFFDELTYEERGQDGKWRKPGKGNNEAFDLFCYAHAIAILRGYERIKWGDEDNVPYWAKLPSVNPNVIRKESSAPEEAESAVEIEQVKPQPKPKPKSNWLNGGASKKKGGWL*	hallmark_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0039	shell	direct	high	2120	1.0	GCA_003425955.1_00704
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	678018	678236	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	24492	24710	GCA_003425955_1_1_665	GCA_003425955_1_1_665	+	1904311	.	.	hypothetical protein	MIYDKDELEEKIRALDEKIENAQSQVSFNGRSVSYQVSEWTKQRDRYQQMLNELLAETRQRVKRHRIKYARF*	.	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0040	shell	direct	high	218	0.995	GCA_003425955.1_00705
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	678240	679763	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	24714	26237	GCA_003425955_1_1_666	GCA_003425955_1_1_666	+	1904311	.	CDD:COG5511	Major-Capsid-protein	MGILDKTIAAISPKWGAQRAKSRYVMNAYEAAMPSRTHKAKRESQGANVSTKQSAVSLREQARALDQNHDIVIGILDKMEERVIGSRGIHIEPQPMNLNGDVNETLAEQIRKKWAEWSIRPEVTGQFTRPELERMLLRTWLRDGEVFIQLVRGSVAGLNHSTKIAFSLEALEPDFVPMNTLDTANLIQGVELDAWRRPKSYRVYMDNPQENNRTYGRVKSVPAENMLHLAFKKRLHQLRGVSMLHGVIIRLADLKDYEESERVAARIAAAFTMYIKKGDAALYGDNEDYSADSPERDFEIAPGAIIDDLKPGEDIGLINSNRPNVNLETFRNGQLRATAAGTRSSYSSIARDYNGTYSSQRQELVESFEGYSVLQDTFVAHISRPIYREWLKMAIVSGEIDVPVDIDPASLYNAVYSGPVMPWIDPTKEAQAWKERIKGGLATESQAVRASGSNPAEVKRRRRVEVEENRKFGLKFDTDLTNTGTTNDKTKNDSVAGGDGNERNKDE*	hallmark_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0041	shell	direct	high	1523	0.999	GCA_003425955.1_00706
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	679735	681741	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	26209	28215	GCA_003425955_1_1_667	GCA_003425955_1_1_667	+	1904311	.	PDB:6WKK_D	Major-Capsid-Protein	MATSATKTNNQSWYSIKAKANDTAEISIYDEIGFWGVSAASFAQDLKDCGNNIKQINLHIHSPGGDVFDGIAIYNLLKNHPAKVTVYIDGLAASMASVIAMAGNEVIMPENAMMMIHKPWGIQGGDAEDMRKYADLLDKVENTLIPAYASKTGKTPEELAEMLSAETWLNGKECVEQGFADKLAEPLVAMASIKSRKLEDFENMPKAMKDMLFKPQGNAGASAPQATPTPAQPAPTEPVNQAPTAPVDNTAQVQAELNKRNADIKAVFAPFGTTHNDLLVECLGDLSITADQAKDKLLAKLGAGTTPSAAVTPYADNGNIVGDSVKQSLLARAGIDKDKVNAKDNAYNAMTLRELARASLVDRGISVSGQNAMSMVGLAFTHSSSDFGQILIDVAHKSLLKGWETAAENFDQFTSRGTLTDFRAAKRVGLGDFGYLPQVGEGEEYTYGTIGDEGASVALATYGQLFSITRQAIINDDMHLLTKIPEKMGQAARATIAKLVFALLTGNAIAQDGKKLFDGSHKNSFDNAALDVANIDKAIQMMNGFVNTRGEPLAIEPDFMLLPTSLYTRAKQVLGSASVEGADINSGIINPIRDIVPTVKSARLQVANPKSWYLINKEAIEVSYLDGIDTPYMEQQQGFTVDGVSTKVRIDAGVNVIDYRGVVKVTNK*	hallmark_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0042	shell	direct	high	2006	1.0	GCA_003425955.1_00707
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	681820	682143	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	28294	28617	GCA_003425955_1_1_668	GCA_003425955_1_1_668	+	1904311	.	COG5471	Predicted phage recombinase, RecA/RadA family [Mobilome: prophages, transposons]. 	MSKNYLQDGNTVRFTSTAAVKSGDVVMLENLAVIAVSHVAQNETGVGLTTGVFTVKAKAEDDIKQGAIVYWSATDGATITAGSNKRLGIAWHASGVSMGTVDVKINT*	mmseqs_cdd	nonviral_gene	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0043	shell	direct	high	323	0.997	GCA_003425955.1_00708
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	682124	682435	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	28598	28909	GCA_003425955_1_1_669	GCA_003425955_1_1_669	+	1904311	.	pfam13856	ATP-binding sugar transporter from pro-phage. Members of this short family are putative ATP-binding sugar transporter-like protein.	MSRSTLSPFDDALAQADKVISDVMMSVYVINGKKYKAVLDESPKLMSGNYTDDYLINGTTRTLTLFKASGYKPKLGDIIISSTEEYVVRGFSFEDGKIVLQLE*	mmseqs_cdd	nonviral_gene	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0044	shell	direct	high	311	0.997	GCA_003425955.1_00709
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	682438	682968	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	28912	29442	GCA_003425955_1_1_670	GCA_003425955_1_1_670	+	1904311	.	PFAM:PF06763.10	minor-tail-protein	MAVKIEGMAALQANIQKLANQVAPKAAAKAINKVARSAIKNGTKNVSKEIHVPAKLIRKRTRLSQKATANRPVAKIRVDRRNLPLIRLLENPRRTMRASKGQIRIGKYQIQRGFIQTLANGRKHVMQRQGKERYSIDVVKIPLSRPLTTAFHNELKDYSSQIKVELTRELSDILKK*	hallmark_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0045	shell	direct	high	530	0.998	GCA_003425955.1_00710
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	682977	683387	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	29451	29861	GCA_003425955_1_1_671	GCA_003425955_1_1_671	+	1904311	.	PFAM:PF06141.10	Minor-tail-protein	MLIHKKIRHQVSDMLKSSIKGVENIYSGRPLFIDIDQEKTAIAVFLDEISCEEVDLCHHEYTAALNIAIYLKTALGDDTLDDIADKIKERLSVAISNDELSENISEMTLISYEYEQDTTNRTWFVSNLKYQIKYED*	hallmark_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0046	shell	direct	high	410	0.998	GCA_003425955.1_00711
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	683390	684040	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	29864	30514	GCA_003425955_1_1_672	GCA_003425955_1_1_672	+	1904311	.	PFAM:PF06199.10	major-tail-protein	MPTQTTPFQGTKFYLGTGLTEGKAVTAVTVKPNATITSAGHGAKVGDFIKLTGLGALDGYYPVKAVTNDLITLADEVDWTSQDAPASYAAVKVSTVKWSSNFCAIKQIEGDGDTLGEEDITTMCSEGTETEAGEIEYGSIKLTFFYAPATAMQADLRKKFYAKETFPWMMILKNAQGSLYGTGFIQTSPNFSGEVKGKFESGVTIKKAKRDYHLPA*	phrogs_hmm	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0047	shell	direct	high	650	0.998	GCA_003425955.1_00712
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	684199	684315	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	30673	30789	GCA_003425955_1_1_673	GCA_003425955_1_1_673	+	1904311	.	.	hypothetical protein	MQYGLWETTLAYLVLGVCFIIAWRLPNIINSIKNKGDK*	.	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0048	shell	direct	high	117	1.0	GCA_003425955.1_00713
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	684315	684722	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	30789	31196	GCA_003425955_1_1_674	GCA_003425955_1_1_674	+	1904311	.	PFAM:PF16462.4	tail-assembly-chaperone	MNLREKLLANKPKITPIIINGENYYIREITVGEMNRVLYGQQQELVHIAESQGIELNFNDEKHLTEQLAKIYDPNRLTRTLAMRLCDQDGKNLFDMDNPDDLTALSKLDKVVFEQLTQAIVEDEPKNSQAEESSK*	phrogs_hmm	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0049	shell	direct	high	407	0.998	GCA_003425955.1_00714
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	684767	684991	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	31241	31465	GCA_003425955_1_1_675	GCA_003425955_1_1_675	+	1904311	.	pfam13227	Protein of unknown function (DUF4035). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 67 and 93 amino acids in length.	MPERHLQEYEIFYQEQPFGLWREDYRTAQVSHLLAMINRDPKSKPPELSDFMPFYQEKMDDEDDDGVADYLANR*	mmseqs_cdd	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0050	shell	direct	high	224	0.996	GCA_003425955.1_00715
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	685060	685443	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	31534	31917	GCA_003425955_1_1_676	GCA_003425955_1_1_676	+	1904311	.	PFAM:PF15781.4	toxin	MKQEWEVILQDPLLNWLETLAEDDVLKIYAALELLSTEGPQLSRPYADTLQGSKYTNLKELRVQSKLSVFRLFYIFDPVRQAIVLCGGDKKGKKEKLFYKEMIALAEQTYDDYLSELTKEQENEREI*	phrogs_hmm	nonviral_gene	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0051	shell	direct	high	383	0.997	GCA_003425955.1_00716
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	685427	685729	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	31901	32203	GCA_003425955_1_1_677	GCA_003425955_1_1_677	+	1904311	.	pfam13744	Helix-turn-helix domain. Members of this family contains a DNA-binding helix-turn-helix domain.	MSVKFKDLMNNLPAEKQAKVKAMADDMRMELQLYRIREELELSQKQMAEALSISQPSVVALEKRGNDIKLSSVKRYIEAMGGVLNLSVELPTGKTVTFNL*	mmseqs_cdd	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0052	shell	direct	high	302	0.997	GCA_003425955.1_00717
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	685742	685981	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	32216	32455	GCA_003425955_1_1_678	GCA_003425955_1_1_678	+	1904311	.	.	hypothetical protein	MLRDFIQFTAKCFFILLIALGTLFLLFAVDFIYILAFIGVYVAIFATCLVVAIIKENNRIKKLRIVEQDKNRVKYVIIN*	.	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0053	shell	direct	high	239	0.996	GCA_003425955.1_00718
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	686033	689425	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	32507	35899	GCA_003425955_1_1_679	GCA_003425955_1_1_679	+	1904311	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MSSLGSLNILLSLDSIQFNQALDKSSYQTQKFAKQFELNFTKAQAKAKQFSERTTQYLNNIEKAANTINKTTSRTFWAGIVSSGGSYLSSGISDVIKYADSYTELQNRIRLVTNSQTAMVAATESVFDISLKTNQAVGATAQIYQRFAQNADRLNLSQLQVSELTETVAKSVAISGASAGAAEAALMQFGQALGSAELRGDELNSVIEQTPGLADAIAKGLGVTTGELKNLAKAGQLDIHTVIQALVKARDTVDNDFNKRVKTLSMSFTNLETSITKFSGEANSALGITQKLATGVDFVSDHLQELIIGLGSLTAALAIGHLSKYGLELLKTGYASAKNALAHIAEAKAIATKATAMRTAAQVEMASLNAQFKLAQSEQTRFALRERMKVQSAQIIALAQAEATAKRNLATATNLATMAAKGLQSVMALLGGPAGVIGIAATSLIFFSSQAAQARQWALDTTTANQGLAESYNELSEAALSLKVEKQLEDIEKYYKEIEKAKASAKSKNINGDFDGFTVVNSISDKELEHLQNEIKSIEENASLAEKALVKMLAPLAENMLRSGKSLDDVRQKFKLLGIDAVTANNIIATLPKSFSDAANGAKNATDKTLDLKDAIDKLNGKSTTLAQKLEVAKLKQQGQAKSAYVLAGLYELLGKEGAEYNEVLIGIATGTITAANAADKAVGLSVETLNKIIAGKATLEKMFSDETKVTTIETQIKESHKKSGENARDSWLNFYDEIRKKNSSSLGEIELEQARMFQRLEEHNKKGVVSYQEYETAKTAIAERFARQRLELAGKYAPEKLLKANRDNELKSIQELYEKGQLNQSEVVKASTRVQFDYAQQVSQSAVDPLAQLRALYDPQQELINQQTQELAQLQSFNDQKLITEEEFQQRKQQIIEKYRNNQFQEQMGLYATGLNDLGNAFGTLTSIVEQSAGKQSAAYKAMFAISKAFAIAEATVKLSQAIAQALADPTALTPAQKFANMAAVASAGVNLVSQITSVGFATGGYTGDGGKYTPAGIVHKGEYVITKEATARLGRGFLDHLNYGSVRRGFANGGGVGVPRLPTMAYQPKSSGNIAVKVINNGEPMDATVSQQSKNGQLEITVELVRQIAQAEAGTMLQKNMRPGGLLS*	hallmark_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0054	shell	direct	high	3392	1.0	GCA_003425955.1_00719
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	689434	689766	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	35908	36240	GCA_003425955_1_1_680	GCA_003425955_1_1_680	+	1904311	.	PFAM:PF05939.12	minor-tail-protein	MALKTLSWCPQPKYTVEEEPRRKVLNFGDGYQQRMVDGLNPLLRKFNLTYKLNHKSAVEFDRFLTSHGGVTAFFFREYENGDLIKVVCPKWSKTVTKRHTEISCTFEEVV*	hallmark_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0055	shell	direct	high	332	0.997	GCA_003425955.1_00720
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	689903	690016	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	36377	36490	GCA_003425955_1_1_681	GCA_003425955_1_1_681	+	1904311	.	.	hypothetical protein	MSEKDAGIAGKMLASAAIIAAVGFAIGAACFGISFIL*	.	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0056	shell	direct	high	114	1.0	GCA_003425955.1_00721
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	690243	691427	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	36717	37901	GCA_003425955_1_1_682	GCA_003425955_1_1_682	+	1904311	.	PFAM:PF13588.5	endonuclease	MDIKFILEEIKMSDQIFKERILAHSQHVMRVGQHCSTEETTKQALILPFLDILGFSAYDPTKVKAEYAADFVGAKNGERVDYALFCHDVPVMFIEAKSYNEDLSNHSPQLARYFNATPEVAVAAISNGREWRFFTDLKDKNIMDDVPFLRINFESLDETKIFQLSQFCHDKFQPEALRTLAEESIYLSTFTKTISSSLKEVDCEFVRYIASRSNIGRQLNQRFIESITPIVRQAVEKAVSDMVVSGLSKKPIDIEPVEVTEVEYNDEKADVVDPDNCKIVTTYTERQVLEYVTMIIGSDTDLVAKDTESYFGILYQGKSNRWILRYYDNKQRPSIVIPIDLTSEHQKEIIRAGLEISGNQIIIDYPENILRLSGIIRDCFEYCINDENFRKKSQ*	phrogs_hmm	nonviral_gene	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0057	shell	direct	moderate	1151	0.971	GCA_003425955.1_00722
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	691737	692627	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	38211	39101	GCA_003425955_1_1_683	GCA_003425955_1_1_683	+	1904311	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MANQISTQTVSFNNQSLITIEQNGVHYVAMKPICENIGIQWESQYNRIRRDDVLNSVIFIMNMTGSDSKNYQMICLPIEYLNGWLFGIDINRCNPEIRDTLIKYKKECYQALHDYWFNGKAERKTTVDDRTGLRNAVNMLVSKKGLIYSDAYHLVHQRFNVESIEDLTLEQLPQAVEYVHRIVLEGELITEQKKDKLFTREFTEHDLQQLVWAWFALLRGTELCQVLHPALKQIGSHYAASVYGVAYEYRSTLRQAHNVLTRITEQFECEQGNNWRVLKYLRAYNPKATGFQLDIL*	common_virus_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0058	shell	direct	high	890	0.999	GCA_003425955.1_00724
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	693044	693562	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	39518	40036	GCA_003425955_1_1_684	GCA_003425955_1_1_684	+	1904311	.	pfam10547	P22_AR N-terminal domain. This domain was identified by Iyer and colleagues.	MQTLTAEFLGKEVTLVDNNGIAYVAMREIVEGIGLAWKPQYKKLTDYSQKFSCYHMTTTGKDGKKYEMLCMPIKKLNGWLFSINPNKVRADLKERLENYQEECFLALWDYWTEGIARRDEVKNKLALWQQKKAEYTQRAGERGKLLQQCKSEKQDLERELLQIKQLDLFVNL*	mmseqs_cdd	nonviral_gene	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0059	shell	direct	high	518	0.998	GCA_003425955.1_00726
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	693606	694256	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	40080	40730	GCA_003425955_1_1_685	GCA_003425955_1_1_685	+	1904311	.	PFAM:PF05100.11	minor-tail-protein-	MSIYGQLQQYASHGWIELFELDLTKFGDIVYRFHDGLSPLGQAIVWQGLEYTPYPVKAEGFAVDGLNPVRPRITFSNLGGAITLVLAKLKGIEGARLTRKRTKIIYLDAVNFENGNLTADPNAHLPDDIFYISQKTSEDHLTVSFELLPATDLEGVKLPRRQIVAQYCTHKYKGQFCGYTGDKATCAKTLADCKAHFGEHSELPFGGFPSAAYMRI*	hallmark_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0060	shell	direct	high	650	0.998	GCA_003425955.1_00727
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	694258	694965	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	40732	41439	GCA_003425955_1_1_686	GCA_003425955_1_1_686	+	1904311	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MKHIDDAIAHAKQSYPHESCGFFVLKNGKLQYVACTNLAAETEDEFLIGIEDYARAEGVGEIRTVVHSHPDESCLPSIADQDAHKISGLEWCIIGLEGDEVSTHFMPALTEVPDLYGRKFIHGMTDCYGFVRDWYRQELGINLPNYNRIDGWWDNGGNLYADNFEDAGFYPVKDLKIGDMIVMQINANVPNHAGVYLGDGLIGHHLYGRLSSKDVYGQFYRERTTHIMRHKENTP*	mmseqs_cdd	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0061	shell	direct	high	707	0.999	GCA_003425955.1_00728
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	694904	695623	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	41378	42097	GCA_003425955_1_1_687	GCA_003425955_1_1_687	+	1904311	.	PFAM:PF06805.11	tail-assembly-protein-I	MGNSTANEQRTSCDIRKIRLKGELGKRFGKVHKLAVKTPAEAIRALCVLKRGFKEFLLESEKHGIVYRFLVQREELTTSSDEFQMRYGAQAEFHLIPIIRGSKRGGFFQLIAGAAMIGLAFWNPLGWATIGGTGFLSSAATLPLTIGASLVLGGISQLLVPVPKVSGPQERPENKPSYLFNGAVNTTEQGQPIPLLYGELIVGSAVVSAGLTDKEIPIRTNSTSNNETRGKLKFKRVSG*	hallmark_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0062	shell	direct	high	719	0.999	GCA_003425955.1_00729
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	695627	699265	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	42101	45739	GCA_003425955_1_1_688	GCA_003425955_1_1_688	+	1904311	.	PFAM:PF13550.5	tail-protein	MQIVGRKGGGKGGRAPVEAPDSLKSCSYAKFIDVISCGEIEGPVNGLNSIYFGDVQLQDEKGKFNFNNVAIEWRPGSVRQAPSEICQTNEVTTDVNTEVKKDKPITRSIIASEADIVRVTITVPGLSHQNKSNGDINGTKVELKVEYQANGSQWIDAGNIVIEGKTTSSYNREHSFRLTGEAPWNIKVTRLTDDSDSQALQNKTIFSKITTVFEEKLTYPGVAYVGVQIDAEQFSSIPSRGYHCRGIKLKVPSNYNPETREYSGDWDGTFIVKYSNNPVWIYFDLLTNEEYGAGEYIKEDMLDKWSMYQIAKYCDELVPDGFGGREPRFTCNVYIQTKQEAFKLLRDLTSVFRAMSYWSSGTQMLVQDSPKEPIYQFNNTNVIGGKFSRSGSNIKTRHNVVLVTWNDPKKYFKQSVEYIEDSEAIVKMGYISQTEVVAFGCTSRGQARRLGKWLLYTEQYESEVITFSCGQDGAIPIPGEVIQVSDVHRSGERRGGRVKDGSTVNRIILDAEVEITKESTISIVNEKGELEQRAITQRGKLTEIEVNPGFTSVTENSTWIIASSDIKPELYRVISIVESDDGSYTITASDYNPSKFEHIENGNELIEYDTTNNTLDTGVKNVVITDEIYRGLGGSIQTKIVVSYEPATSLTSRYQIEYREGNGNWKQMEPTTLTSVDIPNVKDGVLYQIRIKTSNVLGVWSDNPIQNYEPIGRLRPPHNVSNLRHKAIAQEGAFLIWDLSPDIDLEYYEIKKGDTYESSKPVGKIKANEFNLGFIRAGEHKYWLSAVDSSDVRSESPTAVTFNISGGQVENLVAEIVGDEVLMTWGETKNNSFSTELYEVKKDDDVLALVKSTSFKFKADFNGNKKFTVTAIDLGGNRSESAQAQLIVHRPTPVSISQQVIDNYVMLRWQSAKATLPIVYYELRKGETIENSEFITNIDGLAFPQFETVGGLYKYWIIGVDSAGNRSEPQYTLSNVAQPPDYILKYDYNSSYDGIKNGSDKIDGKLYLPVRRDTWAEHFRSNNLATPKSQINRGFPLYLQPIDESGYYEEEMDYGTVLASSKITLTPKVISSGSYDINYHIAVKENAKDNWREHDQQSVYETNFRYVKFRITVSNAQKPVVIESLNLKLDQKQKTDGGTVQANASDIKGTWVNFATEFIDASVPVLTPQSKQPLFATSDFKDEPKPKGFYVFLFDKNGNRVSGKVGWVVKGV*	hallmark_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0063	shell	direct	high	3638	1.0	GCA_003425955.1_00730
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	699276	701084	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	45750	47558	GCA_003425955_1_1_689	GCA_003425955_1_1_689	+	1904311	.	CDD:pfam07484	Tail-Collar-Domain	MADFNKPTVDSEYTQFPTEIRAAISAILSFLDGEHTNVPLKAKRWNPSTKIFEEYNGAQWVPMATEYKLPVDYNSLKNKPLPNSAVNDESDTKFASSAAVKTAYDKAAEAKEAASAKQSPATTLAGYGIGNFKVEQGQGDANGYKTDGNYYLASGQNLPENGEWHIEVVSGGATNAVRQIARKANDNKIKTRFFNGSNWSEWKDAGGDGVPIGAVVSFPRAVTNPVGFLRADGSTFSQQTFPDLYRTLGNSNQLPDLTRSDVGMTAYFAVDNIPSGWIAFDSIRSTVTQQNYPELYQYLVDKYSSISNVPLAEDRFIRNTGNGLNIGQTQSDEIKKHVHKVRTHWADSSDSSIFYDKTKTVIDSRLRTATTTDDNLSDNGFMHPLLDSPMATGGNETRPKSLILKLCIKAKNTFDDVQFWVKAFGVVENAGALDAGTLAQNMQALSESVKQKIEENKQSTLREITNAKADINQQFLQAKENLSQIGTLKTVWQGNVGSGRIDISEKCFGKTLILYLQSSERHRLDDNNDIELVSFEVGAEIEGKTGGGVHWLDVRQVRGFPRNGSFLNYVEVKTFAVTVDRNGTAIQIQDLAGRFVKRIDIR*	common_virus_hmm	common_virus	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0064	shell	direct	high	1808	0.999	GCA_003425955.1_00731
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	701096	701698	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	47570	48172	GCA_003425955_1_1_690	GCA_003425955_1_1_690	+	1904311	.	PFAM:PF14301.5	tail-fiber-assembly-protein	MKVYFLKENLNSYQIFPIPQNLNDFVEMEVENESELETKQLIDFKSQYILVDRQPTELHIWNGNSWVIDEEKQTEIKRELIKRLVDSIDDTAASISAKWTRFAEEYKERESVALAFKEANFTGEVSIYISSFATVAGLDNKSATLLILKQAEGLRTLQEQLAVQRMRKYELKHEELSEEELQQIHNDIIRKMKALAEAQQ*	phrogs_hmm	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0065	shell	direct	high	602	0.998	GCA_003425955.1_00732
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	701695	702153	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	48169	48627	GCA_003425955_1_1_691	GCA_003425955_1_1_691	+	1904311	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MTEGKVYLALYKGKKTGWTPKAILARLSDWLTRKLTKGLYSHCEIVVNKGFKVCYSSSIRDGGVRSKIMYLEHEKWDLIELQNITEERIKAYFEQTKNMRYDWWGALGIVLGLKQKRSKFFCSEWCFNAIKNSDEGWRFSPNQLGAMFKHDD*	phrogs_hmm	hypothetical_protein	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0066	shell	direct	high	458	0.998	GCA_003425955.1_00733
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	CDS	702802	703527	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	49276	50001	GCA_003425955_1_1_692	GCA_003425955_1_1_692	+	1904311	.	TIGR00050	RNA methyltransferase, TrmH family, group 1. This is part of the trmH (spoU) family of S-adenosyl-L-methionine (AdoMet)-dependent methyltransferases, and is now characterized, in E. coli, as a tRNA:Cm32/Um32 methyltransferase. It may be named TrMet(Xm32), or TrmJ, according to the nomenclature style chosen [Protein synthesis, tRNA and rRNA base modification]	MLENIRIVLIETSHSGNIGSAARAMKTMGLTQLCLVSPKSVDEQSYALSAGAENIVKNARVVDSFDEAVDDCSLVIGTSARLRHLQNTLIEPRECAEKVVAYKGKIAIVFGRERIGLTNEELLKCHYHLNIPANPDYSSLNLAMAVQLVSYELRMAFLVQNNKKNSLSLIEKNYPTTDQLAYFFDYTERIYQSLGFIQNQGVMRKLKRLYYRAKLEKNELNILNGMLSAVEKRIDLTNEDN*	mmseqs_cdd	nonviral_gene	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_CDS_0067	persistent	direct	high	725	0.999	GCA_003425955.1_00734
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	999174	999317	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	1	144	GCA_003425955_1_1_971	GCA_003425955_1_1_971	+	1904311	.	.	hypothetical protein	MQFKLILSIVHKINLPILTLLYNSFYYQGIVQIHRKDLLGLFIFKNL*	.	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0001	shell	ambiguous	low	3	0.021	GCA_003425955.1_01037
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	999314	999814	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	141	641	GCA_003425955_1_1_972	GCA_003425955_1_1_972	-	1904311	.	pfam02316	Mu DNA-binding domain. This family consists of MuA-transposase and repressor protein CI. These proteins contain homologous DNA-binding domains at their N-termini which compete for the same DNA site within the Mu bacteriophage genome.	MKSKKEWYLPRDLAGLGDLSPFPSNVTRKAKQEGWIKREAKGIKGGGFEYHYSSLPPAVQQALGFKPNEAKKEPLPAARVGERLKEIDRIMAAISSLEAKVKELEEPTLDSLPDTLDQAEKRLVRWFRQCNKDRQAMLLSSAEVLADMSLKEQKESSEPLENCEVA*	mmseqs_cdd	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0002	shell	direct	high	500	0.998	GCA_003425955.1_01037
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1000025	1000252	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	852	1079	GCA_003425955_1_1_973	GCA_003425955_1_1_973	+	1904311	.	COG3423	Predicted transcriptional regulator, lambda repressor-like DNA-binding domain [Transcription]. 	MSRNKRSQDMSNHEIRGELMKKGKSLSQLGVENGLAKTTVRNALDKPYPKGERIIAEALGMKPWDIWPSRYLNQD*	mmseqs_cdd	nonviral_gene	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0003	shell	direct	high	227	0.996	GCA_003425955.1_01038
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1000263	1002272	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	1090	3099	GCA_003425955_1_1_974	GCA_003425955_1_1_974	+	1904311	.	PDB:1BCO_A	Mu-Transposase	MKNWVTAKEIAGIGGLSKHPTNVNRLARKEKWIFREIQGVQGGGYEYSFSSLPLEVQTEYLLKHSEELKVNKENNDSNQQTMIESAWNVLASATFEQEKRAERRFQAVVKVARLVENKIPLMKAFEQVVALYATDSNDETISKGSLKRWWYKVKTHPQGIWLPLLLDRTERDNSCRWADISDKAWAFFCADYLRKSKPKFSVCYYRLTLAAEENDWTIPSLSSLKRKFYNEFTEAEIALARGGEHELRELTAPQIRTVMDLEAYEIVNGDGYQHNVFVDWYEDGRPPIRPKTWFWQDVRTRRILSYCVDDSENGDQIRQATLRMIKQYGIPKTILMDNTRAASDKQTTQQRKRGKRQTAGIKIDGMFDRLGIKVIRTLVFKGRGNGRAKPIERAFKRDSLPAYVDGDARLEAFFTGWSVTEKTEDYQFKKGVNKALFLEILEQGVRLWNDKAGRETELGQGIFSADQLWARDYAQTRQTFATEEQLRQLMMLGESTKVDKHGRFTLKAGYVLNNQKNVYEAQALIGGNVGSVIVRYDPDDLHGTVHIYDQNGVYLCNGECVEKIAFNSEEGARVQKRLINEQRRITKKMVDNHEKLSEHEMAQYRKQFEQSAADFVEPAEKQAFSWTQFADGNTVKTIKLDHELETETEEQNTLSFEQDLFNGLKQVQK*	common_virus_hmm	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0004	shell	direct	high	2009	1.0	GCA_003425955.1_01039
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1002299	1003216	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	3126	4043	GCA_003425955_1_1_975	GCA_003425955_1_1_975	+	1904311	.	COG2842	Bacteriophage DNA transposition protein, AAA+ family ATPase  [Mobilome: prophages, transposons]. 	MTLTQQIQQILERKNITQRELSQQIGMSAGALSAYLKGTYAGNIENIENALENWLKNQDKKIRSFIEAPEFIQTPTAERIFNALEMARFATTIVPIYGASGVGKTKACQEFKKQNQNVWMITISPSRASLNAFLYELALELGFKDAPRRKDRLSRMIVEKLTGTRGIVIVDESDHLTYDAIEELRYIQEKAEVGFALIGNDRVYTRMQGGINPAHEHARLWNRLGNRCAIKASEKEDIQSVAAAWQLDTKDKELMKALYDIGTKAGGLRALTQYLRLAGIAAKGQGVAINLDLILQAKMHMQGAI*	mmseqs_cdd	nonviral_gene	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0005	shell	direct	high	917	0.999	GCA_003425955.1_01040
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1003216	1003419	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	4043	4246	GCA_003425955_1_1_976	GCA_003425955_1_1_976	+	1904311	.	.	hypothetical protein	MKKYLLMIVLLLSACTDVETCNLQCQKERANAEWKQEHGEFQPNLTPEQERYIVEWLVEHYSNGTQP*	.	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0006	shell	direct	high	203	0.995	GCA_003425955.1_01041
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1003441	1003959	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	4268	4786	GCA_003425955_1_1_977	GCA_003425955_1_1_977	+	1904311	.	COG4396	Mu-like prophage host-nuclease inhibitor protein Gam  [Mobilome: prophages, transposons]. 	MAKKATRIKTDTFAVRYQTRDEVEVAIKEIGDLNRELERLAIEQNDKLAAITEEYAPLMNAIKEKLAPKQDAVQAWCESRRDELTQNGKTKTGSFNTGEVQWRQRPPSVGIRGAESVLESLRTLGLVRFIRTKEEVNKEAMLNEPELAATVAGVTIKTGVEDFVITPFEQDI*	mmseqs_cdd	nonviral_gene	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0007	shell	direct	high	518	0.998	GCA_003425955.1_01042
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1004064	1004261	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	4891	5088	GCA_003425955_1_1_978	GCA_003425955_1_1_978	+	1904311	.	NF033650	ANR family transcriptional regulator. ANR family transcriptional regulators include the AggR-activated regulator Aar. The name ANR (AraC Negative Regulators) refers to an effect on, rather than homology to, certain AraC family transcriptional regulators.	MNKNINKFDHFKYYSEQAANSERRGELQDAKAQWAIAELNAPNARNQEWCKHRAAFCDRVLRKPF*	mmseqs_cdd	nonviral_gene	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0008	shell	direct	high	197	0.995	GCA_003425955.1_01043
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1004272	1004436	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	5099	5263	GCA_003425955_1_1_979	GCA_003425955_1_1_979	+	1904311	.	.	hypothetical protein	MAKYVARFYCLVEAVVEAESNEQVLELCDLNVCDVNKLPHTITEIDDVVEVEEV*	.	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0009	shell	direct	high	164	0.994	GCA_003425955.1_01044
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1004433	1004633	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	5260	5460	GCA_003425955_1_1_980	GCA_003425955_1_1_980	+	1904311	.	.	hypothetical protein	MTMQAMTSYEVKIRILDEVVATLEMLENAKELLINDDFSQASRLFRRGASELSLNERRLRYLMQNK*	.	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0010	shell	direct	high	200	0.995	GCA_003425955.1_01045
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1004715	1005683	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	5542	6510	GCA_003425955_1_1_981	GCA_003425955_1_1_981	+	1904311	.	PFAM:PF04381.11	exonuclease-recombination-associated	MRNTDFITLKQCEIYSAHFPTDDVISRVENMRGHSDKYFLRWETVTNPINGKKVTKLGNGNLFFSVHFEWLNLSKALLEHQIWQLKKRGENELGNVVGKSEKEIVSKAKETLLEQDLPYSSEIVNFFYCAETHHLITNSRSPRARIAISNIVTNMSVVEFRTFVVSEEKLGLTAKLTALLTENKPMFNHLHFANRTTLYLAQGEFNETRTYLDCAIRSDDSASKERVIEALKNGYRVQSIKLFSWNEEGKDDISFTLTSSLKINKIKFSGFERMKSTVSTNSFGKHAAEFESYIARQFVALDKIVKGILLGFVEGTKLEENI*	phrogs_hmm	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0011	shell	direct	high	968	0.999	GCA_003425955.1_01046
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1005792	1006280	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	6619	7107	GCA_003425955_1_1_982	GCA_003425955_1_1_982	+	1904311	.	COG4382	Mu-like prophage protein gp16  [Mobilome: prophages, transposons]. 	MRYTKAKYIQLIHIAKHKLSIDESTYRSLLMNLTGKSTCKQMKVTELDKVLSALETKGFQNNAASFHKKTHTSNYHSPSSGKAVVKHDIALKIRAVWIDMSKQGFLRDGSEEALNQFVRNVINPILKPEKLMVLGVAALDYRQGTIVLERLKKWREREINRS*	mmseqs_cdd	nonviral_gene	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0012	shell	direct	high	488	0.998	GCA_003425955.1_01047
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1006284	1006658	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	7111	7485	GCA_003425955_1_1_983	GCA_003425955_1_1_983	+	1904311	.	pfam08765	Mor transcription activator family. Mor (Middle operon regulator) is a sequence specific DNA binding protein. It mediates transcription activation through its interactions with the C-terminal domains of the alpha and sigma subunits of bacterial RNA polymerase. The N terminal region of Mor is the dimerization region, and the C terminal contains a helix-turn-helix motif which binds DNA.	MSTNADIFDEKAPEILADLAKHIETQLLTKVKSNEFNSELAKQIGIEVASHIAQSWGGEVIYIPRNLVLLLSERDRKIFNEFNGSNHRELARKYNVSMQWIYQIVKKVTKEEIARRQFDMFSEK*	mmseqs_cdd	nonviral_gene	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0013	shell	direct	high	374	0.997	GCA_003425955.1_01048
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1006732	1007151	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	7559	7978	GCA_003425955_1_1_984	GCA_003425955_1_1_984	+	1904311	.	.	hypothetical protein	MKKWLVITLMMLGITACGEPEDPNAPTQAEKDTLTLAFINKIKKDSSGAVECKTKQVNNRYYVGCALISLDGRGNTYIFLYNKDKDPVKRFYALNGTAMTIYDNYFKNESLLGSYKDTFGLPMEKDIDLSLIQKSFEEK*	.	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0014	shell	direct	high	419	0.998	GCA_003425955.1_01049
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1007238	1007774	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	8065	8601	GCA_003425955_1_1_985	GCA_003425955_1_1_985	+	1904311	.	PDB:1M0D_D	endodeoxyribonuclease-I	MAIHHIVIHCSATTNGKPLRTSSQSAAERIDEWHQKRGFKRNPTYIKRFNPHLKHVGYHFIIDTNGTVETGREVGETGAHVKGHNQNSIGICLVGGITGMGKNHGEYTRKQWQALHKLLRKLESRFPSSRICGHRDLSPDLNGDGTITPNEWLKDCPCFDVWEWLDSEQVINDEHLFE*	common_virus_hmm	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0015	shell	direct	high	536	0.998	GCA_003425955.1_01050
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1007783	1007926	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	8610	8753	GCA_003425955_1_1_986	GCA_003425955_1_1_986	+	1904311	.	.	hypothetical protein	MSASIKVKVSRSLKGKSFQKLSNNAKQNQRLNSGVTAANAFYLLWGY*	.	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0016	shell	direct	high	143	0.993	GCA_003425955.1_01051
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1007929	1008030	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	8756	8857	GCA_003425955_1_1_987	GCA_003425955_1_1_987	+	1904311	.	.	hypothetical protein	MKREIRGITFFSLVWEIMIFGGFIKEPKNEKTE*	.	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0017	shell	direct	high	101	0.99	GCA_003425955.1_01052
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1008014	1008244	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	8841	9071	GCA_003425955_1_1_988	GCA_003425955_1_1_988	+	1904311	.	pfam10841	Protein of unknown function (DUF2644). This family of proteins with unknown function appear to be restricted to Pasteurellaceae.	MKKLNELITNTDGRLSTTGTIQFGGALLMAIILAICVYLDRSYVPELFMTFAIFCGGGVATKGFANAMERRQGGRE*	mmseqs_cdd	nonviral_gene	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0018	shell	direct	high	230	0.996	GCA_003425955.1_01053
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1008241	1008498	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	9068	9325	GCA_003425955_1_1_989	GCA_003425955_1_1_989	+	1904311	.	pfam10883	Protein of unknown function (DUF2681). This family of proteins is found in bacteria. Proteins in this family are typically between 81 and 117 amino acids in length.	MNLQVIVVCTTFFILLCGYVFFRLKQAQRRVEKLIEENAQLQTEKAVAQTQIKHHQVRQKNEENIVSTSRERIIDRLHNQNDLRD*	mmseqs_cdd	nonviral_gene	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0019	shell	direct	high	257	0.996	GCA_003425955.1_01054
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1008622	1008930	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	9449	9757	GCA_003425955_1_1_990	GCA_003425955_1_1_990	+	1904311	.	PFAM:PF07889.11	lipoprotein	MTINVEFWHLVGLLISFLGCCFGFAKMLVAQFQNSLSERHHNQMKVNDKVEDIEKQLNQMQSALPLNYVLRDDYIRGQAILEAKMDALHKTLSDLYKMESTR*	phrogs_hmm	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0020	shell	direct	high	308	0.997	GCA_003425955.1_01055
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1008927	1009229	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	9754	10056	GCA_003425955_1_1_991	GCA_003425955_1_1_991	+	1904311	.	.	hypothetical protein	MMEKARREGMRWQLLNVLHKAMPYTTSEQFLLDVIRGIYPNVTALEIRQQLEYLQDRKLISIDKQPHGVWFADIHRLGVDIVEYTIDCQAGIARPEKYWA*	.	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0021	shell	direct	high	302	0.997	GCA_003425955.1_01056
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1009239	1009787	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	10066	10614	GCA_003425955_1_1_992	GCA_003425955_1_1_992	+	1904311	.	pfam11985	Protein of unknown function (DUF3486). This family of proteins is functionally uncharacterized. This protein is found in bacteria and viruses. Proteins in this family are about 190 amino acids in length.	MAPRSSIEQLPEDVRRWLERALTENGFAGYVELEKLLKDKGYSISKSAIHRYGQKIEGRLKAIKESAEIAKLITESVDDDGDSQSDALMRLVQTDLMNILIESRNTEELSVKDKIKLFGNIGKNIAAMTSASVKLKQYQAEHKAKLLAKLDEMAKNAEQEGNDMPTLERVRKGLLETYGLNN*	mmseqs_cdd	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0022	shell	direct	high	548	0.998	GCA_003425955.1_01057
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1009771	1011093	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	10598	11920	GCA_003425955_1_1_993	GCA_003425955_1_1_993	+	1904311	.	PFAM:PF03354.15	Large-Terminase	MGLTTNTTPRTVLYNYQKRWLQDNSRFKVAMFSRQSGKTFTTTLEIVLDCMACEARGEKTRWVILSRGERQAKEAINEGVKRHLEAVGIACQIMEVPFSPTINALEVIFPNGSKITALPANPDTARGFSANVFLDEFAFHQDSREIWKALFPVISADWKLRVVSTPNGKGNKFYELMTDLNNTEWSRHTVDIYQAVADGLPRNIEQLRKGLNDEDAWAQEFELKWLDEASSWLSYDLIDAVEHHQAGIPELYTGNPCFVGMDIAVRGDLTVIWVIELVGDVYWTREVITLKRVALREQLAELDRVFNQYHVITCYLDQTGMGEKMVEDAQYSHGKRRVQGVLFNVATKLNMATIGKNAFEDRQIRIPQGDTDLREDLHKLKKVTGSNGVPRFIAESDSKGHADRTWACFLALTAAKEGVIMPIKAQSRKPRTSRKMTQGY*	hallmark_hmm	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0023	shell	direct	high	1322	0.999	GCA_003425955.1_01058
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1011095	1012510	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	11922	13337	GCA_003425955_1_1_994	GCA_003425955_1_1_994	+	1904311	.	PDB:5NGD_C	Portal-protein	MAKKFDLVKEIAVRSHAIDYFSMGQYLPNPDPVLKKMGRDISAYREVLSDSHVAGCVRRRKAAIKGLEWRITPTGNDKTDEILNTLFERLPLPQIITEMLDAALFGYQVLEVMWENQNGLWLPAEVIGKPQEWFVFDEQNQLMLRDKENRNGKLVPEKKFLLTTQEANYTNPYGKSDLALCFWAATFKRGGFKFWLEFTEKYGSPWLVGKHPRQAQTHEIEDLLDSLEQMIGTAVAAIPDDSSISMLESASKGGSSQVFDEFLKYCKSEIAIALLGQNQTTEQESNRASATAGLEVTKEIRNEDVTLVESGFNQLLNWICELNFNMETLPKFELYEQESIDKVQVERDQILSQMGVKFTAQYLHRTYGFEDGDIELTVNNTPKTAEFNEPTLPSNITDGIVEQLEVEGETYIEDWMQTIKDRLSQAESLEDFRNQLDSLIPELNFAEYGELMAWASTTAFLAGRQSVVEEK*	hallmark_hmm	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0024	shell	direct	high	1415	0.999	GCA_003425955.1_01059
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1012511	1013788	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	13338	14615	GCA_003425955_1_1_995	GCA_003425955_1_1_995	+	1904311	.	PFAM:PF04233.13	minor-capsid-component	MSKFTFQEQSRYFEKKLNLKTNSYLDVLGEEHDYFFVVAGANRNEVINAFRETVDQAIHHGETLESFRQRFDEIVEKTGWDYNGGRNWRTRIIYDTNVYGAYNLGRLQQHLDLADVMPYWEYQHNDNSHPRPEHVALDGTIRPATDPFWKYYYPIKAYGCHCTVIAHDEHDLKAMGKQVSPPVEIEYEDKLVGVRSGSPRLVTLPKGYDVGFAPYNFDDLSSSRNVEIDSILFQKLTTAEPRFASLLIQDVMKNTATVALLNHSMKEMVETVSNEKIARGKMKYVGVIHDEVIDKLTAMDKAPQTAVIAVRDEDVLHALRDTKQAKGINLPIEFWEQLPEKLRNPKAILFQPKESFNDKNAKDTLLFIYDTDHGKVAVKMDYEVKLRDQLTSKKFKANLNVVKTASVIDEDLKKLQQFEVLWGEL*	hallmark_hmm	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0025	shell	direct	high	1277	0.999	GCA_003425955.1_01060
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1013975	1014163	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	14802	14990	GCA_003425955_1_1_996	GCA_003425955_1_1_996	+	1904311	.	.	hypothetical protein	MTELEERKKALELLPQFQGLTINEIISVLHWLQAYVQDYQRFDISNELVSHQEEIESSHDSV*	.	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0026	shell	direct	high	188	0.995	GCA_003425955.1_01061
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1014105	1014302	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	14932	15129	GCA_003425955_1_1_997	GCA_003425955_1_1_997	-	1904311	.	.	hypothetical protein	MSNYEDNLLRNIFVAQVATLAKAIKAEKLAQGTRTTSDCYREAIIEIKRNREKILSLLDEIQAHY*	.	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0027	shell	direct	high	197	0.995	GCA_003425955.1_01062
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1014366	1014866	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	15193	15693	GCA_003425955_1_1_998	GCA_003425955_1_1_998	+	1904311	.	PFAM:PF05069.12	virion-morphogenesis-protein	MIKITLNDTQALAKLHSIAQQLQHPRKLYGLLGETLKKIHADRFKAEVAPDGKKWQPLSSITRKIKGNDQILKQGGYLSQKTAYNYDDNRLEFGSDAKYARLHQFGGVIRPKKGKRLKFGKGSNTVYAKQSKIPARPWLGVNAQDEQKLLKKATALLQRQINQNLK*	hallmark_hmm	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0028	shell	direct	high	500	0.998	GCA_003425955.1_01063
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1015109	1016212	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	15936	17039	GCA_003425955_1_1_999	GCA_003425955_1_1_999	+	1904311	.	PFAM:PF10123.8	head-maturation-protease	MNLIEIFKAGTRKDANGKEVTLTIEDLQQAVQSYNVEFHEAPAVIGHPQHNHPAYAWVKRLELDGDILKAEFDQIDPEFAEMVDKGRFKKVSASFYLANSQANPKQGSLYLRHVGFLGAMPPAVKGLRNPEFAEDEEGVVDFSDWTEATLWRRLRDWFIGKHGQEEADKVLPDYLVGSVQEEAVRNSLQPQKAESPIFNEPTQQQGEPEMSAEEKAELERLKAENQQLKDEKAQAEAQKAEAQLNQTKVENADFAESLVSVGKLAPVSKEKAIELLNCAAVQSAGGVVEFGEGENILTAIKAFLEAQPQIIQFGEVATKDNATTTEDNTVEYAEGTSAEAIDMDKRVRAYMKEHNVSYVTAFNAIHS*	phrogs_hmm	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0029	shell	direct	high	1103	0.999	GCA_003425955.1_01064
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1016231	1017157	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	17058	17984	GCA_003425955_1_1_1000	GCA_003425955_1_1_1000	+	1904311	.	PFAM:PF03864.14	Major-Capsid-protein	MSDLSKHRVVDPVLTELAQGYYNGNMISEVLFPIAETQKEGGKIPTFGRLAFRLQTTKRELRAASNRLTPEDIGSLTVVLEENDIEYPIDIREVSEAEGVYPLRQYATGVTQDVIVLNREKACADLALNEDNYDASNKITLSGTSQFTDKNSDPISVIKAGIRAIKRATGRKPNVCAISGDVWEVLSEHPKVLEKIKYVATAVLTPEDFAKLVKIDKVIIGEAVYEQSSELKDIWSKAIVLAYVAAASKEKKQNIYEPSYGYTVRRKNGLYVDTYTEVGGKVEIVRTTDINKPYIVGKAAGYLIKGCI*	hallmark_hmm	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0030	shell	direct	high	926	0.999	GCA_003425955.1_01065
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1017223	1017594	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	18050	18421	GCA_003425955_1_1_1001	GCA_003425955_1_1_1001	+	1904311	.	.	hypothetical protein	MNKKMLYAVVGTMAILHNGKRYEKGDKIELTAEEAENLSLYIQLDQSELEKQKEERRLAEEKAEQERLAAEKAQKEAEEKAEKERLAAEKAQKEAEEKAEKERLVAEKAQKKTEEKTKEKADK*	.	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0031	shell	direct	high	371	0.997	GCA_003425955.1_01066
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1017594	1018028	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	18421	18855	GCA_003425955_1_1_1002	GCA_003425955_1_1_1002	+	1904311	.	CDD:cd08053	head-to-tail-adaptor	MYISAQDLTEVLSERSLIELSNDHSRATEYNPLVLDKACQYATETVDGYLRSRYLLPLKSVPTIVRNICLQLARFWLYSRRPEGTGFPENVKDTYAQALKDLERIQSGKLHLGLEELNENGTNALDDVAKFKTRANKKIDLTGY*	hallmark_hmm	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0032	shell	direct	high	434	0.998	GCA_003425955.1_01067
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1018040	1018537	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	18867	19364	GCA_003425955_1_1_1003	GCA_003425955_1_1_1003	+	1904311	.	PDB:2GJV_C	tail-completion-protein	MSATQTILNSIQTHLLSQIDSFAIELFPDNPSEYFLRDESGAILIQYAGSKFERINSTDIIQQRRTVTIALTVIARSQHNDDGALAILDQVRLAIVGFRPENCLACALINEEFAGEADGLWQYQLLVQTETWQVEQTKAVDLPKLANVYSRKPTDPLNPILQPKS*	hallmark_hmm	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0033	shell	direct	high	497	0.998	GCA_003425955.1_01068
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1018547	1019932	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	19374	20759	GCA_003425955_1_1_1004	GCA_003425955_1_1_1004	+	1904311	.	PDB:3J9Q_Q	tail-sheath-tube	MAFHHGTETKRVTGGSVAVETVDGAIIGIVGTAPIGPLNELTLCQTKKDFAKFGTILNQGFTLPDAFDVIARYAAGQVYVVNVLDVSKHKSEIQDESITLDETTLLANTQKKGLLSLTLKSNSTPLTLNEDYWVDMQTGEIRLKVSKTSLTATYTYADPSKVTEEDIKGGIESSTGKRKGFELLRDGFNLYGADAKILICPEFDKTASCASALGTLAEQLKAVAYVQLPKGTSLSKAIQGRGPQGTINAKDSTERVRHFFPYALGSSNQLESLAVHAAGLRMKVDVEKGYWHSTSNHQLLGVIGMELPLTARIDDIQSETNRLNAVGITTIFNSFGTGFRLWGNRSSNYPTVTHIINFETALRTGDLIDESIRMVELQYIDRPIDDALIDSLTETVDTYLRALPSIVGYSLGLDYDYDLVDAFSKGQVPIKYDYTPKLPAERITNTSVMTRKYLVNLVSQK*	common_virus_hmm	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0034	shell	direct	high	1385	0.999	GCA_003425955.1_01069
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1019943	1020461	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	20770	21288	GCA_003425955_1_1_1005	GCA_003425955_1_1_1005	+	1904311	.	PDB:5W5E_O	major-tail-protein	MSVAINQIINANVYMDGNSLLGKAKQFKLPDIEFEQIEHKGLGLVGTIKLPSGIAALEGEVTWDSFYPEVRAKAYNPMKNVQLMARSNLQVFDARGLVAEEPMVTIMNVSFSKTTGASLKNKEATEHADTFQVHSIKQTVGGKEIFFYDAFANILRVNGQDVLQKYRTNIGQ*	hallmark_hmm	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0035	shell	direct	high	518	0.998	GCA_003425955.1_01070
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1020555	1020830	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	21382	21657	GCA_003425955_1_1_1006	GCA_003425955_1_1_1006	+	1904311	.	PFAM:PF10109.8	tail-protein	MSLSNQIQIYRSIQLQFPIKDGEGKDITELKIRRAKVADIKQMSNFKGTDADKEIYMLSLLTGLVPEDFDAMDIADYAKVQAALADMQKGK*	phrogs_hmm	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0036	shell	direct	high	275	0.996	GCA_003425955.1_01071
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1020851	1020991	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	21678	21818	GCA_003425955_1_1_1007	GCA_003425955_1_1_1007	+	1904311	.	pfam06528	Phage P2 GpE. This family consists of several phage and bacterial proteins which are closely related to the GpE tail protein from Phage P2.	MVADVAWWFGWNVSEIEQMTLDELSTWLEQANRQIKAGYSKSKATL*	mmseqs_cdd	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0037	.	unmatched_CDS	none	0	0	.
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1021007	1021240	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	21834	22067	GCA_003425955_1_1_1008	GCA_003425955_1_1_1008	-	1904311	.	.	hypothetical protein	MKTTTSFDFLESLIVLSCVVGFGYTLYSFLTFAASQLDFVQIIFAVFIWVIAWQIIGAVLFFAYRLGSGRLFSKANK*	.	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0038	shell	direct	high	233	0.996	GCA_003425955.1_01072
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1021277	1023625	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	22104	24452	GCA_003425955_1_1_1009	GCA_003425955_1_1_1009	+	1904311	.	PFAM:PF10145.8	minor-tail-protein	MSSNLAISLVIGASVGGAIAGIKNLRNSLKLFKDESQSVGSRMLGLGKNVALGTSSLISLGTAATTSMLAIAQPAIKFESAMADVKKVVNFDSPAQFKEMEQDILRLTRTIPMASEEIAAIVAAGGQAGIARENLLGYAEDAAKMGVAFDMAAGDAGTAMATMANVLGKPISEMAKFGDAINHLSDNANAKAADIVNVIARAGSDTRMLGLTENQAAALGSTFLSMGKAPEVAAQAIKGMSSAFAELKAGKHAKELQMLGLTPKSFAKAMNKDAQGAISDFIARVKKLPKDKQYPLLAKMFGKQYADDIMLLAQNTAEYNRQLGLLEERDENGNLKYMGSMQREFENRSATTENNLQLLKNSFNEIGIAIGAKLLPPINLLVNKLKPVIYNILEWMNANPELVNQFVQIGGGLVAIIGGFVALKTVLSLGLMAILPFWSGGKKLFSLFKFLTPVLMKLAYGFGYTLGLIAKGALFLGKLLSGVLVKGLMLVGKTMLFVGRAMLMNPIGLLITGIAVGAFLIYEYWEPISAFFSTLWAEVTVIFDNVCQFVTNIWNDVQGIWSAVWDGVTNWFTGLWESINGLFNGNFTELGNIILAFNPLSLFQSIFSSVLNYFSVELPAEFTNFGKNIIDGLVNGIGNAWDSAKETVTELGTSVKNWFAEKLGIHSPSRVFMGFGENTVQGLAIGINKSLGLAEKASDEMSNAVGIFPHSDYQSLQTTFAQQQSEQAQHGGMTIHFNPTINVNGSSNNQVLNDVKEGLNISLREFETMLARVLDQQKRRAY*	hallmark_hmm	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0039	shell	direct	high	2348	1.0	GCA_003425955.1_01073
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1023625	1024557	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	24452	25384	GCA_003425955_1_1_1010	GCA_003425955_1_1_1010	+	1904311	.	PFAM:PF06995.10	tail-protein	MYLMLGTIALEPIDVTDFSEIQAARFAEHQVLKGKPRLQAMGESLAELNLSVRLHHKIGGVERRYQALLAAKAKQDALALIWGRGKFKGNFVITDIHSNTLFTDKYGNVLCRELTINLKEYVGELKNNLLGAALNIGKGSLLGSILPPEFFAGMNAAKEALTKGIDLYNQGKRIVDEVQNTIAIMKQFSQDPTTALAYLPSVLGNLDGALGSFSELTGMSELFNGVRSVLPVVSEFSQEVAEIQSGLMAIQSDFQQGSSGSDWSEWFPSANRTMSEVAESFDFLAPRVAEMTAWIVLRNDYEVNNDTDRA*	phrogs_hmm	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0040	shell	direct	high	932	0.999	GCA_003425955.1_01074
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1024538	1024768	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	25365	25595	GCA_003425955_1_1_1011	GCA_003425955_1_1_1011	+	1904311	.	COG5004	P2-like prophage tail protein X  [Mobilome: prophages, transposons]. 	MTQTVLKHIVKQGERWDNLAYHYYGNALEYSRIIDANPHLSFYEVLPTGATVFIPVLQVKPTNNEDMPPWLRGDNE*	mmseqs_cdd	nonviral_gene	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0041	shell	direct	high	230	0.996	GCA_003425955.1_01075
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1024761	1025825	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	25588	26652	GCA_003425955_1_1_1012	GCA_003425955_1_1_1012	+	1904311	.	PDB:3CDD_F	tail-protein	MSNIAQPDFSLFYEKTNITADIEPHLIELSYTDYLEGQSDELVVQFEDISGKWIRAWFPTQGDKLKGAIGYKGEQLVDIGAFEIDEVEYQYRPSNITLRALSAGVSKNQRTLKPKAYEHTTLAQVIAVVAKRLKLKVVGEIKHIPIARITQYQERDLEFLARLGREYHHSFKVVNDQLVFTAKEKLGESESVLTIEEQDTISISLRDRISSTAKEVNISGYDANGKKVIKKSKKAKAKREDVSQAAKSSEDSLQIVTRGESQEQIDARGEAALAEQNDDQQSGTIKLWGNPKLVAGNTILLRNLGVFSGKYLIKSSHHTIYRNQGYTTTIDVRLLEFIADDLVTQSMEKHNANP*	common_virus_hmm	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0042	shell	direct	high	1064	0.999	GCA_003425955.1_01076
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1025812	1026420	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	26639	27247	GCA_003425955_1_1_1013	GCA_003425955_1_1_1013	+	1904311	.	CDD:COG4540	baseplate-assembly-protein	MQTHNFTATYQEGIVSAVDSTKHKVRCKIPALDDLETAWLSYLTPNAGGNQFYCLPDVGELVAIILDARGEGGCVLGAIFNAQDPTPTGDSNIWMKKFSNGTIIKHDRNSGNVEVSAVGEVLIKSPSKVTIDCPATETTGDLMVKGALTYMKGMTGYGGGGATAMINGSLETKGGDIKADNISLKTHKHTEQGDGKDTSIAK*	common_virus_hmm	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0043	shell	direct	high	608	0.998	GCA_003425955.1_01077
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1026475	1026840	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	27302	27667	GCA_003425955_1_1_1014	GCA_003425955_1_1_1014	+	1904311	.	CDD:COG3628	baseplate-assembly-protein	MNTHTHLTTHWQLAPNDEVQSVIQGIDDIHLCIANILNTIKGTDILRPEFGSDHFRYIDQPEDLAVPNFVREITFALQRFEKRIEIDEVKVSGNAPHFTFTIFWSLKEDVYREIYSTEVKG*	common_virus_hmm	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0044	shell	direct	high	365	0.997	GCA_003425955.1_01078
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1026840	1027946	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	27667	28773	GCA_003425955_1_1_1015	GCA_003425955_1_1_1015	+	1904311	.	CDD:COG3948	baseplate-assembly-protein	MKADDVKIVSEDVKQILADTIADYEKRTGKTLQPAHIERSIIQSYAYRELLVRKGINEAFLNTFPQFAKGLALDLCGEPMGCYRLQDKPARCVLRFSIEATHPLVLIPKGTRVAVDEKLEFITLNDDVITPLISYVEIEAQANIKGTMGNGWEIGRVKTLKSPLMTSLEVKVSNIDVPSGGLVQESDDDYRKRILSAPEAFSTCGSVAAYDYHVRAVSQAIADVNVATPKGGLVRITVLTKEGIPDSRLLNDIKQYVSGEKRRPLCDTVEVKAPTQRDYQITATLKLLDGFREDIVKTKARDALQFYLSDKTKKLGLDVVPSALISALRVEGVYDVTLTSPQKIVVAENEWANCTAISVEVESERTNG*	hallmark_hmm	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0045	shell	direct	high	1106	0.999	GCA_003425955.1_01079
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1027939	1028508	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	28766	29335	GCA_003425955_1_1_1016	GCA_003425955_1_1_1016	+	1904311	.	PFAM:PF09684.9	Tail-protein	MARLRYPDIIARDAKYTALAELGQRLPQFKLSPIMTTLVDLLDDRFIEVLAEKWSVTGYDGLFLATTQESKKGLIKKSVELHRHKGTPWSVREVIRQLGFGEIEIDEGLKNRDYSANTFVNKIPSDERWAYYGIQLSKPVTNEQAVEIRKILRNFVPARCLLGVLDYKSAPVLYNNKVRYNKQYNHGSV*	hallmark_hmm	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0046	shell	direct	high	569	0.998	GCA_003425955.1_01080
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1028540	1030249	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	29367	31076	GCA_003425955_1_1_1017	GCA_003425955_1_1_1017	+	1904311	.	CDD:pfam07484	Tail-Collar-Domain	MAGLNETNKWETEIYRIEENDPVHGGEDGITNKPIKQLANRTKYLKTEVEKRYIAQNASTEQTGLVQLDSNTDSDAEDKAATPKAVNVVKALVIAVRNALNNYIPNSKKSNADNSSSSDTIATSYALKKVRDIATKRATDTTAGQTVLSHKTNGTDKSKSASEFALGELNKELAGKGVPLGAVVSFPKGMNPRGYLRAIGGTFNRATYPDLYVANGNSDILPNLHRSDVGMTAYFAVDNIPNGWIAFDSIRTTVTQQNYPELYRHLVGKYGSISNVPLAEDRFIRNASNNLSVGETQSDEIKKHVHKVRTHWVNSSDSNIFYDKTKTVIDSRLRTATTTDDNLSDNGFMHPLLDSPMATGGNETRPKSLILKLCIKAKNTFDDVQFWVKAFGVVENAGALDAGTLAQNMQALSESVEQKIEENKQSTLREITNAKADIKQQFLQAQENLSQIGTLKTVWQGNVGSGQITISEKCFGKTLIFYLQSSESHSLDDNNDIEIVSFEVGAEIEGKKGGRVRWLDVREVNARSNGGRPIYYVEVKTFAVTVDRDGTTIQIQNLAGRFVKRIDIR*	common_virus_hmm	common_virus	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0047	shell	direct	high	1709	0.999	GCA_003425955.1_01081
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1030261	1030863	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	31088	31690	GCA_003425955_1_1_1018	GCA_003425955_1_1_1018	+	1904311	.	PFAM:PF14301.5	tail-fiber-assembly-protein	MKVYFLKENLNSYQIFPIPQNLNDFVEMEVENESELETKQLIDFKSQYILVDRQPTELHKWNGNSWVVDKKKKTEIKRELIKNLVDSIDDTAANISARWTRFAEEYKEREAAAIAFKEANFAGEVSVYISSFATVAGLDNQSASLLILQQAESLRTLQQQLAVQRMRKYELKHEALSDEELQRIHDDIIGKMQTLAEAQQ*	phrogs_hmm	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0048	shell	direct	high	602	0.998	GCA_003425955.1_01082
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1030930	1031361	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	31757	32188	GCA_003425955_1_1_1019	GCA_003425955_1_1_1019	+	1904311	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MARLSDWLTRKLTKGVYSHCEIAVMKEVFVSGHHYETEVMYECYSSSIRDGGVRCKQIDVYDREKWDLIELEGVTEAQIKAYFDRTLGCKYDWWGALGIVLGIKQKRSKYFCSEWCFNAICGGESGWRFSPNQLAAIFNKEKS*	phrogs_hmm	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0049	shell	direct	high	431	0.998	GCA_003425955.1_01083
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1031537	1031656	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	32364	32483	GCA_003425955_1_1_1020	GCA_003425955_1_1_1020	+	1904311	.	COG4416	Mu-like prophage FluMu protein Com [Mobilome: prophages, transposons]. 	MQSIKAIRCTFCNKLLAKVGIVGYLEIKCPRCKTVNTTR*	mmseqs_cdd	nonviral_gene	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0050	shell	direct	high	119	0.992	GCA_003425955.1_01084
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1031713	1032558	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	32540	33385	GCA_003425955_1_1_1021	GCA_003425955_1_1_1021	+	1904311	.	PFAM:PF00145.16	DNA-methyltransferase	MANQNTFKQAPLPFIGQKRMFLKHFETVLNENIKGDGEGWTVIDTFGGSGLLSHAAKRLKPKARVIYNDFDGYAERLAYINDTNALRTQIFAKIGNATPKNKRLPKSLKAEIIKIIDQFKGYKDLNCLTSWLLFSGQQVSSLDELYKKDFWHCVRLSDYPSAEGYLDGVEVIRESFHTLLPKFTDNPKALFVLDPPYLCTKQESYKQATYFDLIDFLRLVNITRPPYIFFSSTKSEFVRFIEYMVDDKVHNWQAFENAKRITVNAKLNYQVAYEDNLVYKF*	phrogs_hmm	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0051	shell	direct	high	845	0.999	GCA_003425955.1_01085
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1032598	1032861	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	33425	33688	GCA_003425955_1_1_1022	GCA_003425955_1_1_1022	-	1904311	.	.	hypothetical protein	MTNFKMRTEQEIMMELALVAVKEHDGFVVDGSQYSLPNECGQTFVYNTAFLDVRFVEDGRKDCVVRFTSTLASFAPPFYCLLSELED*	.	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0052	shell	direct	high	263	0.996	GCA_003425955.1_01086
GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote	cenote	CDS	1033153	1033329	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C48	33980	34156	GCA_003425955_1_1_1023	GCA_003425955_1_1_1023	-	1904311	.	.	hypothetical protein	MTEPLSKINGIITKNYLEMQPENQYFERKGLGEKDIKPTKIAEELVGMLNADVAVREF*	.	hypothetical_protein	C48	34156	999174	1033330	GCA_003425955.1|CP031683.1@region_999175_1033330@tool_cenote_CDS_0053	shell	direct	high	176	0.994	GCA_003425955.1_01087
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1325539	1326399	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	1	861	GCA_003425955_1_1_1268	GCA_003425955_1_1_1268	-	1904311	.	PDB:2VDW_C	Capping-Enzyme-D1	MKNELICYKQMPVWTKDNLPQMFQEKHNTKVGTWGKLTVLKGKLKFYELTENGDVIAEHIFTPESEIPFVEPQAWHRVEALSDDLECTLGFYCKKEDYFSKKYNMTAIHGDVVDAAKIISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDFIVSTVVFMFLNRERVPSIIKNMQEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKDWEFLEYNENMGELHKTDENGNRIKMKFATMLARKK*	common_virus_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0001	persistent	direct	high	860	0.999	GCA_003425955.1_01347
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1326512	1328560	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	974	3022	GCA_003425955_1_1_1269	GCA_003425955_1_1_1269	-	1904311	.	PRK00133	methionyl-tRNA synthetase; Reviewed	MTTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIMLNADKLGITPEELIAKAKADHIRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANGFIKSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGTTPIVKESEHFFFDLPAFEGMLKEWTRSGSLQSEIANKMQEWFESGLQQWDISRDAPYFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCEREGIDFNEFWAEGSDAELYHFIGKDIVYFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLNHIDPECLRYYYAAKLNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLADKLEDEALFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAELQAVCSMGIELFRVLMSYLKPVLPKLAERAETFLQAELRWDNIHQPLLGHTLAPFKALFSRLEKKQIDAVVEETKALFAAANKAAEKTEAKPTALSTVEPIAETITIDDFAKLDMRVAKVLKCEAVPESNKLLRFELDLGDHTRQVFSGIKAAYNKPEELEGRFVIMVANLAPRKMKFGVSEGMILSAGTGGSDLFLLSADSGVTAGMQVK*	mmseqs_cdd	nonviral_gene	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0002	persistent	direct	high	2048	1.0	GCA_003425955.1_01348
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1328711	1329823	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	3173	4285	GCA_003425955_1_1_1270	GCA_003425955_1_1_1270	+	1904311	.	PDB:3EZ9_B	ParA;-dna-binding,-winged-hth-protein	MATYFSDNLTADQQNQVQQIIQQFQHPTLQKDLIVLNTLKKVEKGGDTLRIELKLPFAWNSGAEQLKQAVSDALLKATDCKLIKWAVAYQIATLKRANNQPAVKGVKNIIAVSSGKGGVGKSSVSVNLALALQAQGARVGILDADIYGPSIPHMLGAADQRPTSPDNQHITPIKAHGLSANSIGFLMNEDSATIWRGPMASSALSQLLNETLWDSLDYLIIDMPPGTGDIQLTLSQQIPVTGAVVVTTPQDIALLDAVKGISMFERVSVPVLGVVENMSMHICSKCGHHEAIFGTGGAEKMAEKYNVKVLAQLPLHIRIREDLDAGNPTVVRVPENEISQAFLQLAEKVSTELYWQGSVIPSEILFKEVK*	common_virus_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0003	persistent	direct	high	1112	0.999	GCA_003425955.1_01349
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1329870	1330532	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	4332	4994	GCA_003425955_1_1_1271	GCA_003425955_1_1_1271	-	1904311	.	cd02149	nitroreductase similar to Escherichia coli NfsB. NAD(P)H:FMN oxidoreductase family. This domain catalyzes the reduction of flavin, nitrocompound, quinones and azo compounds using NADH or NADPH as an electron donor. The enzyme is a homodimer, and each monomer binds a FMN as co-factor. This family includes FRase I in Vibrio fischeri, wihich reduces FMN into FMNH2 as part of the bioluminescent reaction. The family also includes oxygen-insensitive nitroreductases that use NADH or NADPH as an electron donor in the ping pong bi bi mechanism. This type of nitroreductase can be used in cancer chemotherapy to activate a range of prodrugs.	MTQLTREQVLELFHQRSSTRYYDPTKKISDEDFECILECGRLSPSSVGSEPWKFLVIQNKTLREKMKPFSWGMINQLDNCSHLVVILAKKNARYDSPFFVDVMARKGLNAEQQQAALAKYKTLQEEDMKLLESDRTLFDWCSKQTYIALANMLTGASALGIDSCPIEGFHYDKMNECLAEEGLFDPQEYAVSVAATFGYRSRDIAKKSRKTLDEVVRWVG*	mmseqs_cdd	nonviral_gene	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0004	persistent	direct	high	662	0.998	GCA_003425955.1_01350
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1330646	1331320	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	5108	5782	GCA_003425955_1_1_1272	GCA_003425955_1_1_1272	+	1904311	.	COG1083	CMP-N-acetylneuraminic acid synthetase  [Cell wall/membrane/envelope biogenesis]. 	MTRIAIIPARAGSKGIKDKNLQLVGGVSLVGRAILAAQESGMFDQIVVTSDGENILKEATKYGAKPVARPESLAQSDTRTIDAILHCLETLNISQGTAVLLQPTSPLRNALDIRNAMEIFLGGKYKSVVSACECEHHPYKSFTLEGTEVQPIHELTDFEAPRQKLPKSYRANGAIYINDIESLFEEKRFFIAPMRFYLMPTYRSIDIDSTLDLQLAESLISKEF*	mmseqs_cdd	nonviral_gene	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0005	persistent	direct	high	674	0.999	GCA_003425955.1_01351
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1331214	1331507	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	5676	5969	GCA_003425955_1_1_1273	GCA_003425955_1_1_1273	-	1904311	.	.	hypothetical protein	MSQCSAGKLKMPAGKSTIFTILKIKLDDLLLEKKLYLVIKNLHLSWLFNPTFGVQIKSAANFFRILLKLNFRLIANQVWSQYQWNDKLALNKNALAQ*	.	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0006	persistent	ambiguous	low	108	0.367	GCA_003425955.1_01351
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1332029	1332301	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	6491	6763	GCA_003425955_1_1_1274	GCA_003425955_1_1_1274	-	1904311	.	CDD:PHA02536	portal-vertex-protein	MQVIPLSDAIAKDDFLNIKNASRDDVLAAHRVPPQLMGIVPNNTGGFGDVEKATRVFFINEIIPLQERLKEINSWIGEEVITFSDYKLLN*	hallmark_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0007	shell	direct	high	272	0.996	GCA_003425955.1_01352
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1332407	1333039	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	6869	7501	GCA_003425955_1_1_1275	GCA_003425955_1_1_1275	-	1904311	.	CDD:PHA02536	portal-vertex-protein	MSKKTKKSTALSTGNQAQAFSFGEPIPVIDRAEVLNYFESVVMYEKYYNPPINLSYLAKALNASAHHNSAITVKKNILLSTCKTTALLPRTQLEKLVQDYLVFGNAYVEKTVNSFGKVVSLKSSLAKYMRVGVETGVFYQIVNGFDEYEFKKGSVFNLINPDVNQEIYGVPEYLAALQSAFLNESATLFRCKYYLNGAHAGSIIYMTDPT*	hallmark_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0008	shell	direct	high	632	0.998	GCA_003425955.1_01353
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1333049	1334830	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	7511	9292	GCA_003425955_1_1_1276	GCA_003425955_1_1_1276	-	1904311	.	CDD:PHA02535	terminase-ATPase-subunit	MDEQVINQPSPEVTVEIKRKAQQMYFSGYKIAEISRQLNTPASTIASWKDREKWDDIAPVGRVELALETRLNLLIAKEEKSGSDYKEIDLLGRQMERMARVKKYSFGDGNEVDLNPKLANRNKGERKKAEPNAIDQEQEELLINGFLDGMFNYQRIWHKAKEHRIRNILKSRQIGATYYFAHEAFIDALTTGHNQIFLSASKKQALQFRSYIVNYAKQTADVDLKGETIKLPNGAELIFLGTNSATAQSYHGNLYFDEVFWVPKFDVMRKVASGMAAQKMYRQTYFSTPTTIAHPAYAFFSGKAFNRNRAKSEKIEIDISHENLKSGKLCADRQWKQIVSIYDAMEGGCNLFNIDDLIAENSKEEFEQLFLCQFADDNSSAFKFSDLQLCQVDSLEEWHDYKPFYQRPFGNREVWLGYDPAFTGDRAALVIVAPPKVEGGDYRVLHKQTFHGMDYETQASRIKQFCDDYNVTRIVIDKTGMGSGVYQEVRKFYPMAQGLEYNADLKNEMVLKTQNLIQKRRLKFDSGDNDIVSSFMTVKKRITGTGKITYVSDRSEDASHGDLSWAIMNCILNVPYGLGGDVSSNKSTIFTFE*	hallmark_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0009	shell	direct	high	1781	0.999	GCA_003425955.1_01354
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1334995	1335810	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	9457	10272	GCA_003425955_1_1_1277	GCA_003425955_1_1_1277	+	1904311	.	CDD:pfam05929	capsid-scaffolding-protein-serine-peptidase	MAKKSKWVVVATEGATTDGRTIQRNWISEMAANYDPKKYGARVNLEHIKWRYMWNDDPHSKCYGDVIGLKTEENAEGKLQLLAQIDPTDDLIKLNKDRQKIYTSIECDPNFADTGEAYLVGLAVTDNPASLGTEMLVFSAGASANPLNNRKEKADNIFTAAVETELEFVEETQSIFEKIKGLFAKKEKSDDERFSDQTQAIELLAEQTKETLEKLTALSDDLAKQKAEIEEMKASNAEIQATFAELQKPVEPENPRPLVYGEQPETDGRFF*	hallmark_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0010	shell	direct	high	815	0.999	GCA_003425955.1_01355
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1335831	1336880	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	10293	11342	GCA_003425955_1_1_1278	GCA_003425955_1_1_1278	+	1904311	.	PFAM:PF05125.11	Major-Capsid-protein	MNKFTKQKFNTYLAGVAQDNGEDVAFIANGGQFTVEPTIQQKLENAVLESSDFLKRINVVMVQEMKGSALRLGVLSPVASRTDTNTKARETTDIHSLQENTYSCEQTNFDTHLNYPTLDSWAKFPDFAARVGKLKAERIALDRIMIGWNGTSAATTTNRTSNPLLQDVNKGWLVQIEDKAKARVLKEIEESSGKIEIGAGKTYKNLDALVFALKEDFIPAQYRDDTKLVAIMGSDLLADKYFPLINQEKPSEILAGDTVISQKRVGGLQAVSVPFFPKGTVLVTSLDNLSIYVQEGKVRRHLKDVPERNRVEDYLSSNEAYVVENYEAVAMAKNITILEAPTPISPVAA*	hallmark_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0011	shell	direct	high	1049	0.999	GCA_003425955.1_01356
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1336892	1337542	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	11354	12004	GCA_003425955_1_1_1279	GCA_003425955_1_1_1279	+	1904311	.	PFAM:PF05944.11	small-terminase	MRPTKRHFLEVSAAIANAAETEDLSDFTEYEKMCRILARHRKDLKNIQSTERKGAFKKQILPDYLPWIEGALSVGSGKQDNVLMTWCVWAIDCGEYHLALQIADYAVFHDLRLPEPFTRTLGTLLAEEFADQAKAAQAANKPFEVAYLEQVQRITADCDMPDESRARLLRELGLLLVEKHPEQALAYLERALGLDQKIGVKGDIKKLKKQLSATEC*	hallmark_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0012	shell	direct	high	650	0.998	GCA_003425955.1_01357
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1337836	1338342	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	12298	12804	GCA_003425955_1_1_1280	GCA_003425955_1_1_1280	+	1904311	.	PFAM:PF05926.10	head-completion-protein	MSDGAISVKLAPDYEMGEVQQQLNDYDTSDDIISNDGFFPDMSLSQFRNQYRADGTITTQRLQDALIEGMASVNAELSTFKTQSKRDSLEQIIAPSINGESVLIYRYKRAVSCLALANLYERYASYDSTNDGEKKMAQLKDSIDELRRDARFAISDILGRKRVDAELI*	hallmark_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0013	shell	direct	high	506	0.998	GCA_003425955.1_01358
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1338342	1338551	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	12804	13013	GCA_003425955_1_1_1281	GCA_003425955_1_1_1281	+	1904311	.	COG5004	P2-like prophage tail protein X  [Mobilome: prophages, transposons]. 	MQVYAQQNDNLDAILYRHFGRSEGLLEITCELNPHLMDKPIIPIGTPVILPDADTEKISVANDTIQLWS*	mmseqs_cdd	nonviral_gene	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0014	shell	direct	high	209	0.995	GCA_003425955.1_01359
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1338553	1338774	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	13015	13236	GCA_003425955_1_1_1282	GCA_003425955_1_1_1282	+	1904311	.	pfam16080	Bacteriophage holin family HP1. Phage_holin_2_3 is a family of small hydrophobic phage proteins called holins with one transmembrane domain. Holins are produced by double-stranded DNA bacteriophages that use an endolysin-holin strategy to achieve lysis of their hosts. The endolysins are peptidoglycan-degrading enzymes that are usually accumulated in the cytosol until access to the cell wall substrate is provided by the holin membrane lesion.	MHDAPSKASYTSGIFAFLIGRIADMFSNVNWADVASITGIVIGVATFLVNWYYKKKDFELKEKELKQRIHHHD*	mmseqs_cdd	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0015	shell	direct	high	221	0.995	GCA_003425955.1_01360
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1338767	1339285	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	13229	13747	GCA_003425955_1_1_1283	GCA_003425955_1_1_1283	+	1904311	.	CDD:cd16901	P1-lysozyme	MIKRSAKYICAISAVVGLVIASHGNEIRTSEKGLLLIGNAEGCMKKPYQCPADVLTVGIGITDAVEKIDRNKIYTLQEIAELYVKGIKQSEKCVNQYANGKTMPQGAFDALVSITFNVGCGKLKNSSLFKMARQGYSKAMCGQFERWIYAAGKPLKGLIERRQKEKNLCLIS*	common_virus_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0016	shell	direct	high	518	0.998	GCA_003425955.1_01361
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1339270	1339620	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	13732	14082	GCA_003425955_1_1_1284	GCA_003425955_1_1_1284	+	1904311	.	PFAM:PF10828.7	Rz-like-spanin	MFNFLTAKERGIFLIGPILLVLLIVFLGFKANYWRKEMLKEEQLKLKWQNAYIELNHSVQNFAEQQAQLIQAVNNLKANQNQQTQDLKNVLKSNQDWANRPLPDDVKRVLNSAGSH*	phrogs_hmm	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0017	shell	direct	high	350	0.997	GCA_003425955.1_01362
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1339795	1340010	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	14257	14472	GCA_003425955_1_1_1285	GCA_003425955_1_1_1285	+	1904311	.	PHA00080	DksA-like zinc finger domain containing protein	MTDQFDRAQQLEEMQREIALKKHRTFKAVSRLYCEDCDAPIPEKRRQMIQGVTRCVTCQQRFEIQQRNFRK*	mmseqs_cdd	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0018	shell	direct	high	215	0.995	GCA_003425955.1_01363
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1340007	1340129	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	14469	14591	GCA_003425955_1_1_1286	GCA_003425955_1_1_1286	+	1904311	.	.	hypothetical protein	MRRTTLFLAIAAALPCLANTYTVPFRDGPFVNIQIILTEE*	.	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0019	shell	direct	high	122	0.992	GCA_003425955.1_01364
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1340162	1340269	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	14624	14731	GCA_003425955_1_1_1287	GCA_003425955_1_1_1287	+	1904311	.	.	hypothetical protein	MTDTGHLIVAVDKDNRPLICRDTQNEKAQPTAQNP*	.	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0020	shell	direct	high	107	0.991	GCA_003425955.1_01365
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1340235	1340705	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	14697	15167	GCA_003425955_1_1_1288	GCA_003425955_1_1_1288	+	1904311	.	PFAM:PF06891.10	tail-completion-protein	MKKPNQLRKILEQSHPDFVKNPDHLQLYVDGGQIVATGAASFSFEYRYTLNVVVTDYAGDIATLIVPMMAYLRTNQPEILENPQIRENAFKFQIDYNNNNTADISFEIQLTERVVSKKDGNNVQIHYAKEPVWDEPNRVKVYLENRDSPIFEGDTV*	hallmark_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0021	shell	direct	high	470	0.998	GCA_003425955.1_01366
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1340705	1341166	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	15167	15628	GCA_003425955_1_1_1289	GCA_003425955_1_1_1289	+	1904311	.	PFAM:PF05069.12	Virion-morphogenesis-family	MATVEEVQAKLTALIANLSPQARRQLGRKIGQALRKSQSNRIARQQNPDGSAFEPRKPRKEFGKKKGRIKRKAMFAKLRTARHLKVRSNGNEVSVGFNGSSAAIAAVHQYGLTARPSKEKDFKVRYAQRELLGISEQDLSMLNELVIEQISKS*	hallmark_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0022	shell	direct	high	461	0.998	GCA_003425955.1_01367
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1341167	1341514	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	15629	15976	GCA_003425955_1_1_1290	GCA_003425955_1_1_1290	-	1904311	.	.	hypothetical protein	MKNKRTSRTLIMLNIAMWSLVIISTCLHYQFNPFSFIWFDVIAPVGHFFAVVFSALSSFTVSMYELFKPETFWGWVWFVMFVVPIICLPLYVVLLVLFAGKLSHHDTVVPPSYLK*	.	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0023	shell	direct	high	347	0.997	GCA_003425955.1_01368
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1341618	1341800	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	16080	16262	GCA_003425955_1_1_1291	GCA_003425955_1_1_1291	+	1904311	.	CDD:pfam05069	virion-morphogenesis-protein	MPLIKCLLQFAVHQYGLTARPSNNKDFKVQYAQRELLGFAEEDIEMIERFVLRAIAGKEF*	hallmark_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0024	shell	ambiguous	low	69	0.377	GCA_003425955.1_01369
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1341811	1342122	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	16273	16584	GCA_003425955_1_1_1292	GCA_003425955_1_1_1292	-	1904311	.	.	hypothetical protein	MEIFVLLIGLPIIVGLLIAFGTAVLAAFSYIFVGALSLAINFWYITLAVMLVLLAPLIYLNSWLFWILAALVIFFTVAWFFGGDTEQIKAEIERKRIAKEHKL*	.	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0025	shell	direct	high	311	0.997	GCA_003425955.1_01370
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1342225	1342398	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	16687	16860	GCA_003425955_1_1_1293	GCA_003425955_1_1_1293	+	1904311	.	CDD:pfam05069	virion-morphogenesis-protein	MPLIKYLLQFAVHQYGLTARPSNNKDFKVQYAQRELLGFSNSDLEMIEDLIIEKLSL*	hallmark_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0026	shell	direct	high	173	0.994	GCA_003425955.1_01371
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1342376	1342636	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	16838	17098	GCA_003425955_1_1_1294	GCA_003425955_1_1_1294	-	1904311	.	.	hypothetical protein	MIAILSLFILSVGLLGLAIGFGVIAVPWFVSLVIAAPAIFIYMLMIGSVLWLVEVNFFLGMAALVVYAYWIHIIRKHLKSKGLISQ*	.	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0027	shell	direct	high	260	0.996	GCA_003425955.1_01372
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1342705	1343472	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	17167	17934	GCA_003425955_1_1_1295	GCA_003425955_1_1_1295	+	1904311	.	Uniprot:A0A0A8U8Z7_ECOLX	tail-tape-measure-protein-	MNNLQLTVLLNAIDKISAPVRSASKSVHELSAKLKESKSIHRQLNQQNKQHQAAMKQYASAINPLKSKLDSLNQELEQAKQKAASYAQYMKNAQHPTAGFQKEVEKAKSAVKKLKQEQIDAANKLQQARQELAKSGISAEKLAQKQRELQKNTKSATDQIKNQEAALKKLNAKQAAYNQYRGQVEKLKDISGKAQIIGAQATAAGTTMTAPIVNSIRDFMSFEDVMAGVARQVPGLKDKFGQFTPKYDEWKNKIK*	hallmark_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0028	shell	direct	high	767	0.999	GCA_003425955.1_01373
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1343515	1345479	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	17977	19941	GCA_003425955_1_1_1296	GCA_003425955_1_1_1296	+	1904311	.	PFAM:PF10145.8	minor-tail-protein	MVTAAARMDIQENELEDFIRLNTQMATAFDAENPDELVELFGKVQKNFKLTTKDAKELADTINYLDDNAISKGTDIINFLNNTSGIGNLVKISEKNLAALGSTLLTAGNEASTSAKAIESTFNRLSKATRMKPVNNGLKALGLDPKAIQKAMVKDAQGTLMMIVEKIKKLPKHLQAGVISDIAGGNYNTQLAGLVANTEEWRRQIELANSEEAKNSMAREFQTRMTTLSAKWQLFKNRLFNVNSSVGASLKDSMTSLMDGVGNLLDKIETWIDEHPKLTSTIAKTAVAIGGSLSLLGALSLALSFILYPAARLFLGLSKLNVIIPKFSGHLSSAGRLILRGLLSPLKLIALAISPLGIALLSVAALIYKFWQPIKAFFGGFWEGLKSGLAPVLEKFQPLGAAFGVVVGWIEKAVKWFTDLLSPVQSTKEDLDAAVSAGERFGNGMAKAIEFILTPLTRLMDGIKWISENMPSWEGIKNSVSSAWERTKNTSSNAWQSTKETAGSAWESFKDFTGFGSNGKKLPSQNWSGGYTGNGGKYEPMGIVHGGEYVMTKEATSRLGVNTLNALNYGKRALIAGGLGISVATTAPVQVDTRAPIFARPMMTQTSQPMSVNITINAAQGMDERAIAQQVAKQIQRIENQRQARARSSMWDRA*	hallmark_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0029	shell	direct	high	1964	0.999	GCA_003425955.1_01374
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1345556	1345723	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	20018	20185	GCA_003425955_1_1_1297	GCA_003425955_1_1_1297	+	1904311	.	.	hypothetical protein	MNENAPFIREIIDRTSQIKGERVKGDNAKEIKANVQTILKAQLRATQLNARTQTY*	.	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0030	shell	direct	high	167	0.994	GCA_003425955.1_01375
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1345701	1346153	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	20163	20615	GCA_003425955_1_1_1298	GCA_003425955_1_1_1298	+	1904311	.	.	hypothetical protein	MLERKHIKFVEIHHLFTQISLALGFTEQDIDKHSTNLAELIALWQQQEFVEVYVENKDRLFGRAKDSSLAYGASPYYIGLYHARLSYEENDPLVVLTFNYEDNPEQTTVSVRFMVDHDTLFGTKEEKFIQQRMKDIRKRIDDFIQLGNKK*	.	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0031	shell	direct	high	452	0.998	GCA_003425955.1_01376
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1346251	1346808	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	20713	21270	GCA_003425955_1_1_1299	GCA_003425955_1_1_1299	+	1904311	.	.	hypothetical protein	MTNLSLNPIFESFAPIFKQLKTVAMSALFIAPLAINHPVRHTTHTVNIFSVQTDENKSINQQDIEKIIDMVKAVSAITDFVIASITAESLSYIDLSDVLRLESKINKYDDLANNIMVNNKTPELSTTLQSFSNKMHTLCNMMKSEKYKQQSDEVVLSRLYRKSEDAGYTYKSSHSFDDFKKAVMM*	.	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0032	shell	direct	high	557	0.998	GCA_003425955.1_01377
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1346817	1347245	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	21279	21707	GCA_003425955_1_1_1300	GCA_003425955_1_1_1300	+	1904311	.	.	hypothetical protein	MKIELSKQFQEGRLNTPFFKDIQAMSDEELQLIFDFMQSIKQGKLLRGKNKPSWLDDNLNDIPNTEVYQQNEIWHYHCGPYNKGSRYCPMSGLKINLNGETSGPVIHYQKISDEHIVIIAFSPQHEPFPREWDTPNPIIDRA*	.	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0033	shell	direct	high	428	0.998	GCA_003425955.1_01378
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1347355	1347948	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	21817	22410	GCA_003425955_1_1_1301	GCA_003425955_1_1_1301	+	1904311	.	PDB:3VTO_Q	central-spike-protein	MSAELQRKLDNIIRFGVIAEVNHATARARVKSGDILTDFLPFVTFRAGTTKTWSPPTVGEQCVMLSVSGEFTTACILVGLYTQNSPSQSPDEHVIEFADGAKITYNQSSGALVVTGIKTASITAANQIDIDCPAINIKGNVNIDGSLSTTGTSTTKGNISTQGSVTASGDIKGGSISLQNHVHLEQGDGQRTSNAKA*	hallmark_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0034	shell	direct	high	593	0.998	GCA_003425955.1_01379
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1347917	1348288	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	22379	22750	GCA_003425955_1_1_1302	GCA_003425955_1_1_1302	+	1904311	.	CDD:PHA02516	baseplate-wedge-subunit	MANEPLTQRHSMNRYTGETLKNESDHIKQSIADILLTPVGSRIQRREYGSLIPMLIDRPISHTLLLQLAACAVTAINRWEPRVQITQFKPELVEGGIVASYVARSRKDNQEMRNEKLFLGHKQ*	common_virus_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0035	shell	direct	moderate	338	0.909	GCA_003425955.1_01380
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1348285	1349199	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	22747	23661	GCA_003425955_1_1_1303	GCA_003425955_1_1_1303	+	1904311	.	CDD:PHA02568	baseplate-assembly-protein	MSELVDLSKLDAPKVLEDLDFESLLADRKTEFIALFPQDERPFWQARLSLESEPITKLLQEVVYLQLMERNRINNAAKATMLAYASGSNLDVIAANYNVKRQVIQEANNNVTPKIPEILEDDTSLRLRTQLAFEGLSVAGPRSAYIFHALSAHPDVADVSVVSPQPANVTVTILSRNGQGEAEESLLNVVRAKLNDDDIRPIGDRVIVQSAVIQSYEIRAKLHLYRGPEYEPIKAAALKKLTAYTEEKHRLGRDISLSGIYAALHLEGVQRVELISPTADIVLPSSKSAYCTAINLEIVTSDNY*	hallmark_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0036	shell	direct	high	914	0.999	GCA_003425955.1_01381
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1349186	1349725	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	23648	24187	GCA_003425955_1_1_1304	GCA_003425955_1_1_1304	+	1904311	.	PFAM:PF09684.9	Tail-protein	MIITNHLLPIGSTPLEKRAAEILKSAVENPIVIADLINPERCPAELLPYLAWAFSVDKWDENWTEEVKRIAIKQSYFVHKHKGTIGAVKRVVEPIGYLIELKEWFQTNPQGTPGTFSLTVEVSESGLNEQTYNELVRLINDVKPVSRHLNQLAIAISPTGSLSAFVGQQWGEIITVYPQ*	hallmark_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0037	shell	direct	high	539	0.998	GCA_003425955.1_01382
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1349734	1352256	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	24196	26718	GCA_003425955_1_1_1305	GCA_003425955_1_1_1305	+	1904311	.	PFAM:PF12571.7	tail-collar-fibre-protein	MASQYFAILTDYGTRAFAQALSQGQPLQLTQFAVGDGNGQAVTPTASATALVHQTHIARVSAVSLDPRNNKQVIVELTIPENIGGFYIREMGVFDAQNKLIAYANCPESFKPAENSGSGKVQVLRMILKVESSSAVTLSIDNSVIFVTRQQMTPKTITATTQNGFNESGHSHQIAKASTTQQGIVQLTNDTGLESESLALTAKAGKKLAQQTTQLQLNVSQNYIQNSKKSSAVNSESEDNVATSKAAKTAYDKAVEAKTTADGKVGLNGNESINGEKSFENRIVAKRNIRISDSQHYASRGDYLNIGANNGDCWFEYKSSNREIGTLRMHANGDLTYKRQKIYHAGAKPQFNTDIEGKPNTLAGYGIGNFKVEQGQGDANGYKTDGNYYLASGQNLPENGAWHIEVVSGGATNAVRQIARKANDNKIKTRFFNGSNWSEWKETGGDGVPIGAVVSFPRAVTNPVGFLRADGTTFNQQTFPDLYRTLGDSNQLPDLTRSDVGMTAYFAVDNIPNGWIAFDSIRTTVTQQNYPELYRHLVGKYGSISNVPLAEDRFIRNASNNLSVGETQSDEIKKHVHKVRTHWVNSSDSNIFYDKTKTVIDSRLRTATTTDDNLSDNGFMHPLLDSPMATGGNETRPKSLILKLCIKAKNTFDDVQFWVKAFGVVENAGALDAGTLAQNMQALSESVEQKIEENKQSTLREITNAKADIKQQFLQAQENLSQIGTLKTVWQGNVNSRQITLSEKCFGKTLILYLQSSESHRLNDNNDIELVSFEVGAEIEGKRGGGVHWLDVREVNARSNGGRPIYYVEVKTFAVTVDRDGTTIQIQNLAGRFVKRIDIR*	hallmark_hmm	common_virus	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0038	shell	direct	high	2522	1.0	GCA_003425955.1_01383
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1352268	1352870	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	26730	27332	GCA_003425955_1_1_1306	GCA_003425955_1_1_1306	+	1904311	.	PFAM:PF14301.5	tail-fiber-assembly-protein	MKVYFLKENLNSYQIFPIPQNLNDFVEMEVENESELETKQLIDFKSQYILVDRQPTELHKWNGNSWVVDKKKKTEIKRELIKNLVDSIDDTAANISARWTRFAEEYKEREAAAIAFKEANFAGEVSVYISSFATVAGLDNQSASLLILQQAESLRTLQQQLAVQRMRKYELKHEALSDEELQRIHDDIIGKMQTLAEAQQ*	phrogs_hmm	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0039	shell	direct	high	602	0.998	GCA_003425955.1_01384
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1352937	1353371	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	27399	27833	GCA_003425955_1_1_1307	GCA_003425955_1_1_1307	+	1904311	.	PFAM:PF05708.11	enoyl-CoA-hydratase/carnithine-racemase-like	MARLSDWLTRKLTKGVYSHCEIAVMKEVFVSGHHYETEVMYECYSSSIRDGGVRCKQIDVYDREKWDLIELEGVTEAQIKAYFDRTLGCKYDWWGAVGIVLGIKQKRSKYFCSEWCFNCIKNSNEGWRFSPNQLAVAFTTVSNN*	phrogs_hmm	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0040	shell	direct	high	434	0.998	GCA_003425955.1_01385
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1353428	1354249	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	27890	28711	GCA_003425955_1_1_1308	GCA_003425955_1_1_1308	+	1904311	.	.	hypothetical protein	MSILGSMTDAVNKTKTPQAPTISTQSPTKDTSQTMAGNVSNLLNSNSLLMNSAAAKGERMAANRGLQNSTIGVESAQRAMLDAAIPIASQDTQNAFAEKQTRLQADLNFQNQSKLNQQQNQFTASQAELERGHQRGMAQLQSDLAYSNQSRLNQAQNQFTASQAALERQQQKDMANLNHQNEMKNLNAQVAANTIGKSIDFTMQIINNFDAQIATILNNSNMKAEDKTKAIEQLKASRDSEIQFMSKFMQGIPTTQQNWSSFPSLGVPSIQIS*	.	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0041	shell	direct	high	821	0.999	GCA_003425955.1_01386
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1354263	1354631	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	28725	29093	GCA_003425955_1_1_1309	GCA_003425955_1_1_1309	+	1904311	.	.	hypothetical protein	MAFWDGAWDAISGAGKWLGETAGSAMDWMDNHKAASNIIGNVIAGAGGYFAQKQAGKDLINQQRELLNLQDQMKSKYSAVPDADWSYKSLTVDDSPGLANGGILTEMKKRSETKGANNGRVA*	.	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0042	shell	direct	high	368	0.997	GCA_003425955.1_01387
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1354615	1355787	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	29077	30249	GCA_003425955_1_1_1310	GCA_003425955_1_1_1310	+	1904311	.	.	hypothetical protein	MAELHDSFGESMEKAGYERASDSDSSFSGGGGWREDNSSDSYRSTSDRWNDHKSRYGKDKVYTDAFNERRNNSSWSGGHSAISRTISEKYHSLSNGQMSAAVPEKDQKTLTGGLFGKSYSNAPYSERTPSIFDRNIRGSMTLNNGDVWSSDPQYSSVRERADINSYDRIKRGEELNLIGRAVGGVFSGVGGAATTPVGKIAESAANFGLSHVGDLSRQFKSNQEQAYYDSLTPEGKAYYDTRVDFINKSYKNAREKYETNDKWIDRGITAAQVGLSALGPPGAMLGSGIGLLGKAINKKDTMTKSLRDLTETLNSNALNNHIAQQNELAEKERQAYKEFMAGRDLRSDNTQPKGILNTMHNRMQNIDPDKQVKTSDVPNLRNYWANIIVS*	.	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0043	shell	direct	high	1172	0.999	GCA_003425955.1_01388
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1355797	1356324	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	30259	30786	GCA_003425955_1_1_1311	GCA_003425955_1_1_1311	+	1904311	.	.	hypothetical protein	MGILDSMTQQSQPQTTEQSAVENPQGSQQQGSMAQMYQMLMQNSINAIANVAQQRIQEKGPEEGIADLVAKAMISNLQAAQQNGKTIPPQVMMQVAKDLAMQLLQQVGVPEEQIDDVLIDILMNALEQFGEATHGALPQEEEQQYVDMINKVSEMESQRRAQVQNGQSKPMQQGA*	.	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0044	shell	direct	high	527	0.998	GCA_003425955.1_01389
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1356328	1357092	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	30790	31554	GCA_003425955_1_1_1312	GCA_003425955_1_1_1312	+	1904311	.	.	hypothetical protein	MGWGGILGAMTQGLGTGIVKNVEQGWKDEETQKLLDWKTAEADKQRAFDSELLDKKYKHEFELEDHRTRNEISAAAAKARISARYSHGGESEAQKNLLGATQTLGIYDSQLHSLQEKLSATEDKEQQNAIAARINAVSAERENYLKRPDTIAAFKGAGQMGQALYMTGGGNMDLYNPKPVERETVAEDVKSSVAPPVRNMIDVNNLTPQQAADIARQKSEDAARLQFSKASADAKDWAQKRTQYQSSTFIPRTF*	.	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0045	shell	direct	high	764	0.999	GCA_003425955.1_01390
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1357208	1357339	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	31670	31801	GCA_003425955_1_1_1313	GCA_003425955_1_1_1313	-	1904311	.	cd22803	Anti-CRISPR type II subtype C5. AcrIIC5 was discovered via a guilt-by association (GBA) approach, which was based on the strong co-occurrence and clustering of acr and anti-CRISPR associated (aca) genes through proximity and homology searches. AcrIIC5 inhibits Cas9 activity in vitro, as well as CRISPR interference activity in bacteria. It also prevents Cas9-mediated genome editing in mammalian cells. AcrIIC4 and AcrIIC5 are the most potent among the type II-C Acr proteins, preventing substrate DNA binding by Cas9, and exhibiting higher specificities for inhibition of type II-C Cas9s. Type IIC CRISPR-Cas systems are the simplest of the type II systems, employing only three Cas proteins, Cas9, Cas1, and Cas2. Almost all type II Acr proteins characterized to date directly interact with the Cas9 endonuclease, although by distinct mechanisms. The type II CRISPR/Cas subtype has a distinct crRNA-guided surveillance complex encoded by cas9 (formerly csn1), cas1, cas2, and csn2 (for type IIA) or cas4 (for type IIB) genes, all located in a single transcriptional unit directly upstream of the CRISPR locus. Cleavage of the DNA target in type II systems is carried out by Cas9 which is an RNA-guided double-stranded DNase with two independent nuclease domains, HNH and RuvC. Due to the reliance of the type II system on a single protein for function, Cas9 homologs derived from different subtypes and species have been utilized for numerous gene editing applications. CRISPR-Cas immune systems are used by certain prokaryotes and archaea to resist the invasion of foreign nucleic acids such as phages or plasmids. Anti-CRISPRs are small proteins which are the natural inhibitors for CRISPR-Cas systems; encoded on bacterial and archaeal viruses, they allow the virus to evade host CRISPR-Cas systems. The CRISPR-Cas-mediated adaptive immune response can be divided into three steps, including the acquisition of spacer derived from invading nucleic acids, crRNA processing, and target degradation. Theoretically, Acr proteins could suppress any step to disrupt the CRISPR-Cas system. Acr proteins are diverse with no common sequence or structural motif, and they inhibit a wide range of CRISPR-Cas systems with various inhibition mechanisms. CRISPR-Cas systems are divided into two classes (1 and 2) and six types (class 1: types I, III and IV; class 2: types II, V and VI). Class 2 systems employ a single multi-domain effector Cas9 protein complex that performs target recognition and cleavage. Acr families are named for their type and subtype which are numbered sequentially as they are discovered.	MKIDNQDFIDFVENCSDEQGIEEFERAKAIVEKDFAFVTVTDD*	mmseqs_cdd	nonviral_gene	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0046	.	unmatched_CDS	none	0	0	.
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1357385	1357477	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	31847	31939	GCA_003425955_1_1_1314	GCA_003425955_1_1_1314	-	1904311	.	.	hypothetical protein	MKTLYFCSLDGNPRKVFQSEELAKQWKEQG*	.	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0047	shell	direct	moderate	92	0.989	GCA_003425955.1_01391
GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote	cenote	CDS	1357893	1358063	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C68	32355	32525	GCA_003425955_1_1_1315	GCA_003425955_1_1_1315	+	1904311	.	.	hypothetical protein	MQVIKLLKRIVRRLRLFFCGLFTRPTAPRRAPWASLIPSNPESAPKLRVSLAKKES*	.	hypothetical_protein	C68	32525	1325539	1358064	GCA_003425955.1|CP031683.1@region_1325540_1358064@tool_cenote_CDS_0048	.	unmatched_CDS	none	0	0	.
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1460438	1461262	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	1	825	GCA_003425955_1_1_1399	GCA_003425955_1_1_1399	-	1904311	.	2YB1_A	AMIDOHYDROLASE	MTKKYDLHCHSTASDGVLSPTELVHRAYAQGVNVLALCDHDTIAGIDEAEIAAKEVGIELITGVEISTNWEGRGIHIVGLNFDKTHPKMTALLQSQKALREKRTVEIGDKLEKVGIPNAYEGAKALANGEVTRAHYARYLVQIGKVSNDRQAFKRYLGQGKPAFVKAEWTDIPTAIDIIHAAGGIAVIAHPLRYNMTGKWVRKLITDFKAWGGDGMEMADCGQTKDQRQMLARWAKEFNLLGSVGSDFHFPCGWIELGKNLDLVEGVIPVWEKF*	hhsuite_tools	nonviral_gene	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0001	persistent	direct	high	824	0.999	GCA_003425955.1_01476
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1461262	1462281	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	825	1844	GCA_003425955_1_1_1400	GCA_003425955_1_1_1400	-	1904311	.	TIGR01036	dihydroorotate dehydrogenase, subfamily 2. This model describes enzyme protein dihydroorotate dehydrogenase exclusively for subfamily 2. It includes members from bacteria, yeast, plants etc. The subfamilies 1 and 2 share extensive homology, particularly toward the C-terminus. This subfamily has a longer N-terminal region. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]	MYQLFRHGIFQMDAEKAHDFTIQCLKLAGNPLFQPILKSLIHAPKGFPKTVMGVNFPNPIGLAAGADKNGDAIDGFGVLGFGFLEVGTVTPVAQDGNVKPRQFRLIEAESIINRNGFNNNGIDYLIENVRNARYKGVIGINIGKNKFTPLEQGKDDYIFCLNKAYNYAGYITVNISSPNTPDLRQLQYGDYFDDLLRGIKDRQAILANQYNKYVPIAVKIAPDLTESELVQIADTLVRHKMDGVIATNTTISRDTVMGMKNAEQQGGLSGKPLQHKSTEIIKRLHQELKGQIPIIGSGGIDGLQNAQEKIEAGAELLQVYSGLIYHGPKLVKDLVKNIK*	mmseqs_cdd	nonviral_gene	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0002	persistent	direct	high	1019	0.999	GCA_003425955.1_01477
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1462445	1462621	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	2008	2184	GCA_003425955_1_1_1401	GCA_003425955_1_1_1401	-	1904311	.	PFAM:PF09979.8	head-maturation-protease	MKFTDKTTQAATQRTITKDGFLVVPATISKVGVFDYLATELGLKEDGIKKVARTEKSL*	phrogs_hmm	nonviral_gene	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0003	shell	direct	high	176	0.994	GCA_003425955.1_01478
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1462762	1463943	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	2325	3506	GCA_003425955_1_1_1402	GCA_003425955_1_1_1402	-	1904311	.	PFAM:PF04233.13	Minor-capsid-component	MTDDVERAMQQPQGSFFMDDAKGFQAISAKALMKVLEKYEKSDRTSQAENIANGFVGRGDAQNHAEVSTNLKNQTGIDLSAYLRNSPNIAERVNALTAGNIQLIKSIRSQYLDKVQNTVMQAMVRGSLNKDLAAQVKDLGKTTEKRAMFIARDQSSKLNAALTQARHEEVGIKKYMWSTSGDERVRESHAEKDGQIFEYANPPADTGHPGHDVNCRCVQIPVLDDVVNLKSEETELSYQAAEPNKTGKMDLDELFESSIGGGGNKSFSNFGGVNSELITLAKESIGLDITDWQHSIDESSIRHILKQHGNEKAENKRGQRAVTKKDILLLPLVVSAFDSIEYTGTSDSGNETFLIKKEIDDEIFSVQEVRKRHKKIAVKTMWIKRKKKATSSA*	hallmark_hmm	common_virus	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0004	shell	direct	high	1181	0.999	GCA_003425955.1_01479
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1463972	1465306	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	3535	4869	GCA_003425955_1_1_1403	GCA_003425955_1_1_1403	-	1904311	.	PDB:8HDS_J	Portal-Protein	MNILDGIKSLALKLGSKQDQTYYARGLSLTDDLMQIEALWRDNWIANKVCIKRSEDMVRNWRDIFSNDLKSEQLDEFTKLERRLKLRETLTKALQWSSLYGAVGLLLVTDTINITSPLQPTERLKRLIILPKWKISPTGQRDDDVFSPNFGRYSEYTIIGGTQSVLVHHSRLLIINANDAPLSDNDVWGVSDFEKIIDVLKRFDSASANVGDLIFESKIDIFKIAGLSDKISAGLENDVAHVISAVQSIKSATNSLLLDAENEYDRKELSFGGLKDLLTEFRNAVAGAADMPVTILFGQSVSGLASGDEDIQNYHESIHRLQETRLRPVLEVLDTLLCNELFGGQPDDWWFEFLPLTVVKQEQQVNMLNTFATAANTLIQNGVVNEYQVANELRESGLFANISAEDIEEMKNVNEFAGNFEEPENTEDAQVQASEDEQENGALV*	hallmark_hmm	common_virus	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0005	shell	direct	high	1334	0.999	GCA_003425955.1_01480
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1465308	1466651	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	4871	6214	GCA_003425955_1_1_1404	GCA_003425955_1_1_1404	-	1904311	.	PDB:4IDH_A	Large-Terminase	MSQLNIQFPTKFRPLFESIWPFIIFYGGRGSGKSFSIARALVLRAYQSPVRVLCCREIQKSISDSVIQMLADQIEMLGLQNFFDVQKTQIIGQNGSRFTFAGLKTNITSIKSMTGIDVVWVEEGENVSKESWDILIPTIREDGSQIIVSFNPKNILDDTYQRFVIHPPERCKSVLVNWQDNPYFPKELMEDMEQMRERDYELYRHVYEGEPVADSDLAIIKPVWIECAVDAHLKLGFTAKGMKKVGFDVADEGADSNDNAFVHGSVVLDIEVWKNGDVIDSANRTNQSAVKFKADLIIFDSIGVGAGVKAHFKRLPKSLQVEGFNAGGAVAYPEREYIKGKKNQDMFSNIKAQSWWALRDRFYKTYRAVKHGDVYPDDELISLSSNIKELEYLKAELSRPRVDYDNNGRVKVESKKDMKKRGIPSPNMADALVMCYATTKPKSLLDL*	hallmark_hmm	common_virus	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0006	shell	direct	high	1343	0.999	GCA_003425955.1_01481
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1466638	1467150	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	6201	6713	GCA_003425955_1_1_1405	GCA_003425955_1_1_1405	-	1904311	.	PFAM:PF03592.15	Terminase-small-subunit	MSDVKGKSTSGRGLTPKQEKFCQLYIELGNASEAYRQSYDCQDMKSESINRLAKKELDKIKIRSRVDVLQQEHRQRHNLTLDNIIADLQEYRDICMGRKPLTITTVVKNAQEGTAQSVNTECFVFEPTGANKALELLGKHLGMFTNKVDVTTDGKPLPTVINVTFSDEPA*	hallmark_hmm	common_virus	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0007	shell	direct	high	512	0.998	GCA_003425955.1_01482
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1467195	1467473	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	6758	7036	GCA_003425955_1_1_1406	GCA_003425955_1_1_1406	+	1904311	.	COG1396	Transcriptional regulator, contains XRE-family HTH domain [Transcription]. 	MNHLLTFYEKIIFTNPLETGIPEAVAKLALLNDYSALRAWREHLGLTQAEVASRLGISQAAYSQHENSQTLRKSTRIKIATALGINSAQLDF*	mmseqs_cdd	nonviral_gene	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0008	shell	direct	high	278	0.996	GCA_003425955.1_01483
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1467475	1467717	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	7038	7280	GCA_003425955_1_1_1407	GCA_003425955_1_1_1407	-	1904311	.	PDB:5CYB_A	Lipoprotein	MLTLVCLSLFLTACTNKITTKPEYIYPPQAYTAPCVKTAFTGETYGDVVIQLVKVTAERDKCASQVDHLNKWINQAKGGK*	common_virus_hmm	common_virus	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0009	shell	ambiguous	low	49	0.202	GCA_003425955.1_01484
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1467668	1467973	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	7231	7536	GCA_003425955_1_1_1408	GCA_003425955_1_1_1408	-	1904311	.	pfam10828	Protein of unknown function (DUF2570). This is a family of proteins with unknown function.	MALAGVVVVLIGALRYQSSVIDELEITTKQQENTIQQQEDANKSLSLALQQERYAIIEQQERNNEIERIATENAESVKTIIKTQPCAHTRLPQSVLDRLHE*	mmseqs_cdd	nonviral_gene	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0010	shell	direct	high	305	0.997	GCA_003425955.1_01484
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1467984	1468586	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	7547	8149	GCA_003425955_1_1_1409	GCA_003425955_1_1_1409	-	1904311	.	PDB:3WH1_A	Chitinase-	MTMMISEVTFNKIFPHAVKGVYQAISAQIEKAGCVNKMQQAMFLAQCGHESGGFTRFKENLNYSWLGLSKTFRKYFPDPLIAKKYERKPELIANRVYANRLGNGDEKSGDGWKYRGRGLIQITGKDNYAAFRKWLGRDIEPDDVAGNLDLSVKTAVWYWKCYELAELNSVEKVTRRINGGLNGIDERCKLYRALMVTDND*	common_virus_hmm	common_virus	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0011	shell	direct	high	602	0.998	GCA_003425955.1_01485
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1468555	1468911	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	8118	8474	GCA_003425955_1_1_1410	GCA_003425955_1_1_1410	-	1904311	.	TIGR01594	phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]	MPIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPAIRYVLIDAAMCASIAGVAVPICTHLFGHTEYSSFLGTMIGFVGTEKIREFLFKFINRRIEKDDNDDFRSDI*	mmseqs_cdd	nonviral_gene	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0012	shell	direct	high	356	0.997	GCA_003425955.1_01486
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1469248	1470033	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	8811	9596	GCA_003425955_1_1_1411	GCA_003425955_1_1_1411	-	1904311	.	PFAM:PF10547.8	P22_AR-repressor-domain-protein	MFDSATNTIPKGNKSAGFLTSFELSNARFIGGFHQKEIKMTTQIQFSIFNFKNSPVRTITDPNSEIWFCGTDVCDILGYVNAPDAMKKHCKEAGIAKRYISYPSGRKEAIFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQLALPEPEKKFSFEFTEYELQQLVWLWFAFMRGIVTFQHIEKAFRVLGSNMSSQIYGQAYEYLSVLRSTNQILNRITSDFDIDQMTNWRVLKHLRGFNPKAVKIDF*	common_virus_hmm	common_virus	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0013	shell	direct	moderate	669	0.851	GCA_003425955.1_01488
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1470274	1471239	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	9837	10802	GCA_003425955_1_1_1412	GCA_003425955_1_1_1412	+	1904311	.	pfam10546	P63C domain. This domain was identified by Iyer and colleagues.	MVSTSLTAEKRKERAEKAALARWEHKKALEELPLAIHEGVLSIGDKSLDVAVLQNDLRIISSASVFEALDRPNRGSRGGAITENEELIKLPAFMDANNLKPFINQDVIDVIKGVKYRTKDGKIKEGYDATILPVVCDIYLRAREEGALVGKQQNTAQKAEILIRSLAKVGIVALVDEVTGYQDARAKDALAKIFEAFVAKELQPWVKTFPLDYYKELCRLYGVQFPPKNNNQFPQFFGHITNNAVYARLAPELLPELKKSASKQAKKVKLHQFLTEDVGHPKLREHLSSIVTLLKLSKDKDNFYEMLDKIHPKLTLQEGQE*	mmseqs_cdd	nonviral_gene	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0014	shell	direct	high	965	0.999	GCA_003425955.1_01490
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1471289	1471660	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	10852	11223	GCA_003425955_1_1_1413	GCA_003425955_1_1_1413	-	1904311	.	PFAM:PF06530.11	anti-termination-protein-Q-like	MNIDVISVEFGYWATPRYETEFPRVAAGFAEMKCDARYAEKYRMRPISDELGMEIDGYLGVIRKVTPELYDVFVLTYIKRWEKQEIWRYLHISRREYFNRLKTVKTSLLLLLSTEGKQCLFIA*	phrogs_hmm	hypothetical_protein	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0015	shell	direct	high	371	0.997	GCA_003425955.1_01491
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1471691	1472356	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	11254	11919	GCA_003425955_1_1_1414	GCA_003425955_1_1_1414	-	1904311	.	PFAM:PF05551.10	homing-endonuclease	MKCKIDGCNREAMYKADCVCQMHYFRFMRNGTYDLLPKPIRKYRRHNGKGYQLIFEPRHQLAMSDGYVYEHRFVIYSIYQNNLPNCKLCGCKLTWSSCHIDHIDNDITNNTLENLRPICRACNVMRSHTLIPKYTHKGHSKITFNGLTMTAAEWARQDGVTVAGNTILRRIRDGWSIERALFETSSTHPNAAVKHTTTKYKNRFEVKSTGISLDLRLQGDD*	common_virus_hmm	common_virus	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0016	shell	direct	high	665	0.998	GCA_003425955.1_01492
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1472340	1472729	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	11903	12292	GCA_003425955_1_1_1415	GCA_003425955_1_1_1415	-	1904311	.	PFAM:PF05766.11	NinG-recombination-protein	MVRGHWLKALQKEVNKFIRLRDKGQPCIACGTVWKPSFQASHFIPQERRSFLRFDERNIHSGCIRCNLFVGGGNIHGYRPRLVEKIGEQEVEWLEENQHRIKKWEISELKEMLKLYRLKNKELENEMQD*	common_virus_hmm	common_virus	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0017	shell	direct	high	389	0.997	GCA_003425955.1_01493
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1472683	1472904	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	12246	12467	GCA_003425955_1_1_1416	GCA_003425955_1_1_1416	-	1904311	.	pfam05766	Bacteriophage Lambda NinG protein. NinG or Rap is involved in recombination. Rap (recombination adept with plasmid) increases lambda-by-plasmid recombination catalyzed by Escherichia coli's RecBCD pathway.	MAKEYKCKVCGKAFVKTFSSTQKVCSPECAIKLVREQSRKRQKKAEKQEQIERKKRLLDGERALAKSSSKRGK*	mmseqs_cdd	common_virus	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0018	shell	direct	high	221	0.995	GCA_003425955.1_01494
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1472993	1473412	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	12556	12975	GCA_003425955_1_1_1417	GCA_003425955_1_1_1417	-	1904311	.	pfam05772	NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	MSQYKPFFLRDQRIKNNCLDLIKELPTDDKNPLVVKIQPITRNLEQNAKFHAMCQDVANQAEFMGRKLTMEQWKVLFISGHAIATNQKADVVPGLEGEFVNIRESSAQMSVSRMASLIEYVTSWGVQNGVRFNDRWGFK*	mmseqs_cdd	common_virus	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0019	shell	direct	high	419	0.998	GCA_003425955.1_01496
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1473449	1473673	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	13012	13236	GCA_003425955_1_1_1418	GCA_003425955_1_1_1418	-	1904311	.	.	hypothetical protein	MTSYKCPKCGAELEDFYTPDYFISSSEWDDDRFRCNGHLIEPIPFPQVSKFSAVNRTKSCGYFGLEDLGVEYKE*	.	hypothetical_protein	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0020	shell	direct	high	224	0.996	GCA_003425955.1_01497
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1473670	1474290	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	13233	13853	GCA_003425955_1_1_1419	GCA_003425955_1_1_1419	-	1904311	.	PFAM:PF06992.10	Replication-protein-P	MNQLTNQSLHQGVSAQVEKFIDTLFDQLCASCPQLLNLTPERLQVVKRQWILGFAENGITKITQVKRGMAEMRAKPNGYLPSVGEFIQACKVLDYHVLGLPNEAELYQRYKTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKAIPKLLTKAAEKVRSNFPFEDIPKMIPEKPRFYDKAKADKARDSLMAMMKGALQ*	rep_hall_hmm	common_virus	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0021	shell	direct	high	620	0.998	GCA_003425955.1_01498
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1474287	1475009	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	13850	14572	GCA_003425955_1_1_1420	GCA_003425955_1_1_1420	-	1904311	.	pfam13730	Helix-turn-helix domain. 	MSMRLMVQAMNCKVGNPARKLVLLKLADNANDDGICFPSYQYIADKCEMTRRSAISHIEYLIKMGLVSKKERKNKDGSISNLYFLHLEQGSENFALGGENISLGSENFALGGSENISPITSHSLEPVNEPKKTTQKSESEILLERFGITGQLAKDFIAHRKTKRGAISETQLSRLQKQADKAGISICEVVEICIERNWQGFNASWDWRDEKLRTSQAQKMSFEEKNALPWNRPEDWENVL*	mmseqs_cdd	common_virus	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0022	shell	direct	high	722	0.999	GCA_003425955.1_01499
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1475006	1475674	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	14569	15237	GCA_003425955_1_1_1421	GCA_003425955_1_1_1421	-	1904311	.	PFAM:PF03374.13	KilA-protein	MNQLLTMTKENASILTMSSREIAEITHKEHKNVLRVIRDLIEQNLVAQIEPLKFEYRNQWFDYYELNKRDTFVVVARLSPEFTAAVVDRWQALENRQKPTALIPQSFSEALMLAAQLQAEKERNAPKVAFVDHYVEVGTSKSFRETAKILKISERALVNRLVEDKYLYRQSGVLLPYQSAHTKDLFTVKTGTAEHGHNYTQTRVTSKGIEFIASRYASELML*	common_virus_hmm	common_virus	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0023	shell	direct	high	668	0.999	GCA_003425955.1_01500
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1475721	1476161	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	15284	15724	GCA_003425955_1_1_1422	GCA_003425955_1_1_1422	-	1904311	.	PFAM:PF06892.10	CII-like-transcriptional-activator	MEMKKVIIEMVDRIPGGRSAVAGFLGFTESELKNRLYQIKGQRFKNEELIALQLEYGCTDFIDELCRNSGGRFVPDVAEDELDKVELANLQLHELSARGLLFAALEKALEDGEITSKEEDKIRQALSKHLAATQHSIECAIVLHKK*	phrogs_hmm	nonviral_gene	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0024	shell	direct	high	440	0.998	GCA_003425955.1_01501
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1476210	1476398	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	15773	15961	GCA_003425955_1_1_1423	GCA_003425955_1_1_1423	-	1904311	.	COG4197	DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily [Transcription]. 	MLPIEKAYEIVGGISAMARHFNLTPWAVSKWREKVPAERCAKIEELTDGKVKKSELRPDLWD*	mmseqs_cdd	nonviral_gene	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0025	shell	direct	high	188	0.995	GCA_003425955.1_01502
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1476509	1477207	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	16072	16770	GCA_003425955_1_1_1424	GCA_003425955_1_1_1424	+	1904311	.	PDB:2FJR_A	Repressor-protein-CI	MTDLASRLNELMAKQGKNIVDLQKAVGVTYEMARRYTLGTATPRDNKIEAIAKYFGVTPAHLKYGTVDSLENQVTSNVKDVGSFDLWDRNTPLNSDEYAVPFYQDIRLAAGNGFADDIADYNNFKLRFSKSTLRKQGVQYENAVCVIADGNSMEPVIPDGTTVGIDLGNKTIRDGKIYAINHGGLLRIKLLYNMPNEQVKIRSYNTEEHPDEIAELQDISVLGKVFWYSVLL*	common_virus_hmm	common_virus	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0026	shell	direct	high	698	0.999	GCA_003425955.1_01503
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1477259	1478338	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	16822	17901	GCA_003425955_1_1_1425	GCA_003425955_1_1_1425	+	1904311	.	.	hypothetical protein	MDIRLWRSIVRQRTLRALTSKEKKIRQRGGKPKYKHLAHKSFNLFEVIAPYKIILAKEIGYEFVAFKEELEEKAKLAARSRSRLKLNFRDTDIIDAAACSVLIAVLDTIKSQYRTLKFQIVRPKSKPADHRKHIPYDVDAIFCHIGLYKSLGFNYTSSSSQENVKCWHYVYSDSADGEITKPLLDELKSMGVKGIYPSYIEAIANAVEHAYAQNIYSEREFPIKRWWMLLAILEGKLSLFVCDLGHGIPNTLEKTQKANVLSAIWNRLKQLGKPTKDCLYIKASTLIKETRTGLGHRGKGGSDIRAFIDKTPGSRLIIRSNRGMYVYNGKDKPDLTKESRYSINGTVVQWNIPLQEIKE*	.	hypothetical_protein	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0027	shell	direct	high	1079	0.999	GCA_003425955.1_01504
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1478341	1478676	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	17904	18239	GCA_003425955_1_1_1426	GCA_003425955_1_1_1426	+	1904311	.	PF14213.6	STAS-like domain of unknown function (DUF4325)	MQTIYVKDFSQYPGPRYIKDGKASGEEFRDSILIPAIKRDPDIILNLDDTEGYGSSFLEETFGGAIRKGISPEVVLNLVKNLISNDDHDIIDEIKSYVEKEIEILSLKDNK*	hhsuite_tools	hypothetical_protein	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0028	shell	direct	high	335	0.997	GCA_003425955.1_01505
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1478673	1479104	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	18236	18667	GCA_003425955_1_1_1427	GCA_003425955_1_1_1427	+	1904311	.	.	hypothetical protein	MTLSDLIAFSALIVSIFALPISYILGARGLKNTAYNGELSKLSDLCDLVFTEALNIHKKTQSNLSDEMDYHLMIAFHKRLQSKCLEIKSLSNSERYPRMELREVKQAITDHLVSDNLEVRNTAMRGLIYKLDALKTFFTPKFI*	.	hypothetical_protein	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0029	shell	direct	high	431	0.998	GCA_003425955.1_01506
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1479418	1479588	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	18981	19151	GCA_003425955_1_1_1428	GCA_003425955_1_1_1428	-	1904311	.	COG3422	Uncharacterized conserved protein YegP, UPF0339 family [Function unknown]. 	MYFQIFQGVNNQWYWRLKAANHETIAVSEGYTTKQNCLHCIGLVMDTDRKTPIYES*	mmseqs_cdd	nonviral_gene	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0030	shell	direct	high	170	0.994	GCA_003425955.1_01507
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1479603	1479824	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	19166	19387	GCA_003425955_1_1_1429	GCA_003425955_1_1_1429	+	1904311	.	.	hypothetical protein	MQEEMKRYAISYHFDGKRWATDVYAHSFEEAEEKLKAMSQGTVDGEIHLSVYIPENPLSKVSRLITRIAKKFM*	.	hypothetical_protein	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0031	shell	direct	high	221	0.995	GCA_003425955.1_01508
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1480152	1480310	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	19715	19873	GCA_003425955_1_1_1430	GCA_003425955_1_1_1430	+	1904311	.	.	hypothetical protein	MEEKQEKSLSDKDKNLIKQAVLESADKNTNLTPSELAESVCSAVMFIDSYGR*	.	hypothetical_protein	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0032	shell	direct	high	158	0.994	GCA_003425955.1_01509
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1480288	1480491	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	19851	20054	GCA_003425955_1_1_1431	GCA_003425955_1_1_1431	-	1904311	.	.	hypothetical protein	MKKIAADKIALVMARDILKTNSQYLREVNEYVAEDIARFVSTLSSRLQESIDDSISSSDIFNAHKNQ*	.	hypothetical_protein	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0033	shell	direct	high	203	0.995	GCA_003425955.1_01510
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1481092	1482363	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	20655	21926	GCA_003425955_1_1_1432	GCA_003425955_1_1_1432	+	1904311	.	.	hypothetical protein	MKTVKARLTELKNLINTKINEDYEWMGEIKSPEIIKEIEQLYPLIEKIEKSGKSLEISYAKYISLQLIKKIIRILNKKRASNKWDEYDVNSFILSLIKLRMTIKELYLIEVKGELRTEEELNAIAADISKAKLNLEEHISLEEQLVENKKEFENLKNSLITLKKSYNDAQEQITEISQWHEQSEKLSGDISNYEFTAQNNLTKITTLATTAETNKPQIEKYHEDIEGMIKLFNKQKEEIEMIIEDANRASMAGSFKTQSENIDSKMKAVDKILLGSLVATSVISLFNYSTSLSAADSLNILQFLAKSIVTIPLLVIAWLKAKERAYLFRLREDYNYKYSSAMAFEGYKKQVQEQDPKLHQQLLQIAVDNLGINPTKVFDKDLKSTPLETIIDGVGKRLDKAVDGIKGEVNDIPKKTKELIDDE*	.	hypothetical_protein	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0034	shell	direct	high	1271	0.999	GCA_003425955.1_01511
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1482701	1482952	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	22264	22515	GCA_003425955_1_1_1433	GCA_003425955_1_1_1433	+	1904311	.	COG3561	Phage anti-repressor protein  [Mobilome: prophages, transposons]. 	MTNSNLIPVFNGLIQNQPVQICNARELHAFLEIQTRYNDWIKNRINEYGFIQDEDYLVITERTNGRPRKEYHITLDMGKELRN*	mmseqs_cdd	common_virus	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0035	shell	direct	high	251	0.996	GCA_003425955.1_01513
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1483256	1483423	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	22819	22986	GCA_003425955_1_1_1434	GCA_003425955_1_1_1434	+	1904311	.	.	hypothetical protein	MESIKLSQKAEEEIVNAARMAALSNLTEKSQNLITLEDIAIYFGDTIKPLPRLFQ*	.	hypothetical_protein	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0036	shell	direct	high	167	0.994	GCA_003425955.1_01514
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1483532	1483951	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	23095	23514	GCA_003425955_1_1_1435	GCA_003425955_1_1_1435	-	1904311	.	PDB:1Z19_B	Integrase	MELQSQGLQPDTLFSDVIKRYLNEITPTKRGEKHEFNRLNRFLRHPVTDKYISDVSRIGDEELCFDIKSSVLDATFRKLKKLAEREYLHFHDTRREALTRLSKKVDVMTLAKISGHKDISILQNVYYAPDMAEVAELLD*	common_virus_hmm	common_virus	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0037	shell	direct	high	419	0.998	GCA_003425955.1_01515
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	CDS	1484338	1484430	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	23901	23993	GCA_003425955_1_1_1436	GCA_003425955_1_1_1436	-	1904311	.	.	hypothetical protein	MAAEKLTKKRLAQILIMLCILIIAFVWRYF*	.	hypothetical_protein	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_CDS_0038	shell	direct	moderate	92	0.989	GCA_003425955.1_01517
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	tRNA	654143	654218	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	617	692	tRNA-Lys	tRNA-Lys	+	1904311	.	tRNAscan-SE score: 87.4	Lys	NA	tRNAscan-SE	.	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_tRNA_0001	.	.	.	.	.	.
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	tRNA	654242	654317	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	716	791	tRNA-Lys	tRNA-Lys	+	1904311	.	tRNAscan-SE score: 71.8	Lys	NA	tRNAscan-SE	.	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_tRNA_0002	.	.	.	.	.	.
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	tRNA	673745	673815	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	20219	20289	tRNA-Trp	tRNA-Trp	+	1904311	.	tRNAscan-SE score: 43.5	Trp	NA	tRNAscan-SE	.	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_tRNA_0003	.	.	.	.	.	.
GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote	cenote	tRNA	702629	702691	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C34	49103	49165	tRNA-Undet	tRNA-Undet	+	1904311	.	tRNAscan-SE score: 23.9	Undet	NA	tRNAscan-SE	.	C34	50001	653527	703528	GCA_003425955.1|CP031683.1@region_653528_703528@tool_cenote_tRNA_0004	.	.	.	.	.	.
GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote	cenote	tRNA	1484156	1484238	GCA_003425955.1	CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955.1_CP031683.1	GCA_003425955.1|CP031683.1	GCA_003425955_1_1	GCA_003425955_1_1@C74	23719	23801	tRNA-Leu	tRNA-Leu	-	1904311	.	tRNAscan-SE score: 61.6	Leu	NA	tRNAscan-SE	.	C74	23993	1460438	1484431	GCA_003425955.1|CP031683.1@region_1460439_1484431@tool_cenote_tRNA_0001	.	.	.	.	.	.