core_seqid	core_source	core_type	core_start	core_end	core_bax_acc	core_contig_acc	core_bax_acc|contig_acc	core_bax_acc_contig_acc	cenote_input_name	cenote_contig	cenote_phage_region_id	cenote_gene_start	cenote_gene_stop	cenote_gene_name	original_cenote_gene_name	cenote_gene_orient	cenote_contig_length	cenote_dtr_seq	cenote_evidence_accession	cenote_evidence_description	cenote_translation	cenote_Evidence_source	cenote_vscore_category	cenote_chunk_name	cenote_chunk_length	cenote_chunk_start	cenote_chunk_stop	UNI_lookup_ID	pangenome_partition	pangenome_method	pangenome_confidence	pangenome_overlap_length	pangenome_overlap_fraction	pangenome_matching_locus_tag
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	943293	943679	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	1	387	GCA_003443935_1_1_855	GCA_003443935_1_1_855	+	1852323	.	.	hypothetical protein	MFGIKLLHSDDFIKSASSFGCFLAIMDKQTNKNHVYNLSTQVQRFELIDIDQVANLANSVQNGAISATVGTLFVGAGVLPALVALSIGAGLPNRTKDAYVCHIEFDDGKSAILQLSKHKYQQFLKHIA*	.	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0001	shell	direct	high	386	0.997	GCA_003443935.1_00859
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	943742	943948	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	450	656	GCA_003443935_1_1_856	GCA_003443935_1_1_856	+	1852323	.	.	hypothetical protein	MALAINIVLGANTVHFSRNIQKATQNAKKYLQGFALLAYMQAADKDKSVQDFLIIDPNPMTDEQKSLY*	.	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0002	shell	direct	high	206	0.995	GCA_003443935.1_00860
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	943977	944873	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	685	1581	GCA_003443935_1_1_857	GCA_003443935_1_1_857	-	1852323	.	PF14337.6	Domain of unknown function (DUF4393)	MTAETFHLIPAITGAVSGAASVGLLNGPLQTLQDIWFVVYGHKWHYKVESIKAQQAMNIQAMQNNIQTGIEKIPANALKDPNVAIIGPALEASRFHMNEENIREMFANLIVSAMDERKDGQVHHAFVEIIKSLSPLDAKNLEYLSQSGDAPIVNIVKEASYGFHMLHQHVFLGNRQVLDPNLITPSIDNLARLKLIDVTYTEHLTHEPVYDPFYHSALYQEKVSELGKELKLRRLDISKLQDLTRPVELDGKVLNKDERTEQIELINKELESKIEIQKGIIKLTAFGKNFLSVCSPTT*	hhsuite_tools	nonviral_gene	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0003	shell	direct	high	896	0.999	GCA_003443935.1_00861
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	944925	945647	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	1633	2355	GCA_003443935_1_1_858	GCA_003443935_1_1_858	-	1852323	.	PDB:2FJR_A	Repressor-protein-CI	MTPEIRLKNLTLVLEKIEKEKGLNSFAKIAKEYDLNASYLSQLMNGNRQIGERSARSLEKKLKLEKFSLDNCPLQSNINPDFESITEWDNGAPLDDDEAEIPFYKDIAFACGHGAVNGDAPLEGRKLRMGRRTLSNLGVMPINAYAVTACDDSMTPYVQDGDTIYIDKGRKEVKDGRIFAIRFGELCLCKRLYRLPDGGVRIVSDNAAEFPEQVATKQQISDGEFEVIGWVWSVSRLERW*	common_virus_hmm	common_virus	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0004	shell	direct	high	722	0.999	GCA_003443935.1_00862
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	945774	946013	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	2482	2721	GCA_003443935_1_1_859	GCA_003443935_1_1_859	+	1852323	.	PFAM:PF10078.8	transcriptional-repressor	MQIVELRNYLLSMNKQDRIEFAKKCGTTYGQMMQIYRGNRTCHPTLAIEIDKHSKGCVKCDVLSPDTDFNYVRANSESV*	phrogs_hmm	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0005	shell	direct	high	239	0.996	GCA_003443935.1_00863
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	946099	946395	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	2807	3103	GCA_003443935_1_1_860	GCA_003443935_1_1_860	+	1852323	.	.	hypothetical protein	MNEFIIPNSNSVSNDFNYSRTDLDAQEQQIAEFIKKGGKVINLDNSEQPKKKSAKKRDFNNQRINSKMHLVLCYLKRSGKRMTGLQIQEKRHIGNNFR*	.	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0006	shell	direct	high	296	0.997	GCA_003443935.1_00864
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	946768	948522	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	3476	5230	GCA_003443935_1_1_861	GCA_003443935_1_1_861	+	1852323	.	PFAM:PF06152.10	minor-capsid-protein	MKHLINLERFKVHLANKFKTTLNEIDEFLQLVVFRHEISELNYKEFELLIGESKQKLLGFLAGYALELTQDWQELYDYSYTLETKMIDDDKPDTLNMNEPQFDADSPIKLSAQVGVTLNQILAKFGDEQSTKISNAISYAYANGLPNQELVRIIRGTRKNRYQDGILQITTRHAKTIAHTGTAIVANQAKQQFIHDNKDIIKGIKVIATLDLRTSSICRGLDGVFMPLDKARYPPYHFNCRSSFEIVYDGYQTPKQRASMDGVVKNQTYYEWLKNQPAQYQDEVLGKTRAKLFRDGGMTVERFRALQLDKHFTPLTLEQMRALEPKAFDKAFAAVVKLDNTKDRVLAVKRTDWGDLPNVMIAHAKDTITTHKHYQKAKSGELSSALFLVDEYLTDDFVLKLHHTIKGYDNVRIVPVHAEEQLGRNKIPMAYALALSEMLGVDMDLGIVQAKRAYRTSSDGVGRLLKRVSFDGVVLSGHHYMIVDDVITQGGTLADLRGFIESKGGKVILASTLNGKPNSAKLPITKATLGQLRKQAGKEIEQWWQEQFGYDFSQFTESEARYLAKQIHRYGIDAIRDILFASRP*	hallmark_hmm	common_virus	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0007	shell	direct	high	1754	0.999	GCA_003443935.1_00865
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	948741	949391	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	5449	6099	GCA_003443935_1_1_862	GCA_003443935_1_1_862	+	1852323	.	PFAM:PF06810.10	minor-structural-protein-	MNLEELLKSLGLDDEAIGKVVEATKPDQAQAEEIERLRKHNETLLGEKKAESEKRRAEQTEKERLAEETARKKGDFETLEKQYQAKIQELNEQIAKRDKERDENLVKSHAQKLSSQLSDNPANQEILQILIEKRLSAKDGQLSVLDDSGAVSIMTLDDLAKQMQNCGKYDSLIIGTKSCGTGSNGQSAKRAGDYSEQERLALAHSNPALFNQLFLE*	hallmark_hmm	common_virus	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0008	shell	direct	high	650	0.998	GCA_003443935.1_00866
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	949394	950410	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	6102	7118	GCA_003443935_1_1_863	GCA_003443935_1_1_863	+	1852323	.	PDB:6R3A_A	Major-Capsid-Protein	MAKLREIFNKNVTLSYQVKDNLQRSKFWQSGAFVSDARLRPLLNSGSLTFDVPFIHPIDGNLEANYSNTIMTDIAMPRSIEGSKSKGRLALLNEGFIESRLESYLLGQSPLKLMAQMIDDYWLTQAENRAIATLFGLLNYDQSNGKKLSTDISKATADDSSGFDVHAFIDAEGSLDEMHQGSGLMIVHPLIATKMRKQRLLERVTTADDLKPIETYNGRRLIQSKRATVIGTGKNAKYVSYLLGAGAFAADMVAGQDDLELERTANTGNGSGHTTLWTRRNILIHPQGFSFIAEPSTLTGGTKNEALSPSWTDLTTAANWRLDADADATPIRFLITNL*	hallmark_hmm	common_virus	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0009	shell	direct	high	1016	0.999	GCA_003443935.1_00867
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	950421	950624	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	7129	7332	GCA_003443935_1_1_864	GCA_003443935_1_1_864	+	1852323	.	.	hypothetical protein	MSLPKDKVKPAFNFTYPSERAYFDESKSTLTNAQVTDPAKSGADYGIKDPQVTEALTGTKSETAKVE*	.	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0010	shell	direct	high	203	0.995	GCA_003443935.1_00868
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	950685	951044	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	7393	7752	GCA_003443935_1_1_865	GCA_003443935_1_1_865	+	1852323	.	CDD:cd08053	Head-Tail-Connector-Protein	MITLDDLTDIDKADEQTVVIVNAWLNKHKLIPFKTIPEPIKQAGRYIAKAWLDGDLFATRTEGQVISKSSKAGDVSVSKTYADGQMGQAMSQNEQIALALIEPYLQQPLGMFGLPLVRV*	hallmark_hmm	common_virus	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0011	shell	direct	high	359	0.997	GCA_003443935.1_00869
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	951046	951402	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	7754	8110	GCA_003443935_1_1_866	GCA_003443935_1_1_866	+	1852323	.	PFAM:PF12206.7	head-closure-Hc1	MGLNAEISTEITQAFDTDLKDAVKDFTGRRVILSDDDWAVNDTQVLSTINYSGRGVFTGFYAHEIDNKTIMQSDVKLICLQDELTEIPQIDDEINEMKIISISHDPAEVSFTIQLRGF*	phrogs_hmm	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0012	persistent	direct	high	356	0.997	GCA_003443935.1_00870
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	951402	951749	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	8110	8457	GCA_003443935_1_1_867	GCA_003443935_1_1_867	+	1852323	.	PFAM:PF04883.11	tail-component	MGIKWNKKLSIEPIADKIDATYRKFAIDCYNNVIALSPVRKGRYKNAHHISIGSPSYAETGGGIELILGIPKHTYPLIYIQNNLPYALRLEHGWSQQAPTGVYGNAFNSALSKLS*	hallmark_hmm	common_virus	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0013	persistent	direct	high	347	0.997	GCA_003443935.1_00871
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	951999	952382	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	8707	9090	GCA_003443935_1_1_868	GCA_003443935_1_1_868	+	1852323	.	PDB:2L25_A	tail-completion-protein	MNTAQIEQTLLAHIQKWEHFNTVVLARENRNFKPPKSLWGRVTILGGVNTICSVSDEPCILQQGTLVIQLFAPENVGTAEIKHKADSLANHLKAKQFGKLETLAPSVINVGFNEFYQINVSVPWRYY*	hallmark_hmm	common_virus	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0014	cloud	direct	high	383	0.997	GCA_003443935.1_00873
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	952382	952516	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	9090	9224	GCA_003443935_1_1_869	GCA_003443935_1_1_869	+	1852323	.	.	hypothetical protein	MAKTVQKDAGQLYAKIIALERLLDSPKPSHIQRGEWVLMKDQLY*	.	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0015	cloud	direct	high	134	0.993	GCA_003443935.1_00874
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	952557	953465	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	9265	10173	GCA_003443935_1_1_870	GCA_003443935_1_1_870	+	1852323	.	PDB:5NGJ_B	Tail-tube-protein	MSSGAFVTTSIAKQTDKTLPQTGWKTLPNITNGLTVSAEMTSSEMLSGGRIGKAGMVTSASVQGDIEAELMFGAYDELIAAAFWSEWSSGSTPNTLSVGSTKTQFAVAKDFTDINVNHVFTGCVVSSFGLTIDTSSLIKLKFGMTGLGYQESKTTSFAKTPTKTPDTAKASGLSIGEIKVDGTKLDVCVESFSFELDNQTEVQKCLGDNIYGGNILAMLANITGSMTIAYSQKAHEMITNQLTGVTLSLEIPINFGSNKYVIKIPKFQVTGEIPSPSGTDLVTVDLSYTVVDESPVIEKHTA*	hallmark_hmm	common_virus	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0016	shell	direct	high	908	0.999	GCA_003443935.1_00875
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	953549	953695	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	10257	10403	GCA_003443935_1_1_871	GCA_003443935_1_1_871	+	1852323	.	.	hypothetical protein	MEYITIIVDFMKYLIEKHGLFVIWLMVASLITLYKLDMILTAVHLFFN*	.	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0017	shell	direct	high	146	0.993	GCA_003443935.1_00876
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	953747	953908	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	10455	10616	GCA_003443935_1_1_872	GCA_003443935_1_1_872	+	1852323	.	.	hypothetical protein	MAFDLTLLKKDAKMSAKREIEFDGLELTLEIQASEAFKRAAAEVQKIANTPKR*	.	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0018	shell	direct	high	161	0.994	GCA_003443935.1_00877
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	953962	954207	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	10670	10915	GCA_003443935_1_1_873	GCA_003443935_1_1_873	+	1852323	.	PFAM:PF08809.10	Tail-assembly-chaperone	MLFILGEYCISQWNVTADGEPLAINGDNFLILLDQGFEKDKLTQFITLLFETYASLSQEFEDNKAKLVKKSMTATNGKKSG*	phrogs_hmm	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0019	shell	direct	high	245	0.996	GCA_003443935.1_00878
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	954573	955025	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	11281	11733	GCA_003443935_1_1_874	GCA_003443935_1_1_874	+	1852323	.	pfam12869	tRNA_anti-like. This is a family of bacterial, archeael and viral proteins that is related to the tRNA_anti family pfam01336. The major characteristic of families like tRNA_anti is their OB-fold, and many of them bind DNA.	MKKLFKFILIAVIALIGLGIIIGMLSGGDNNNQSASNNTAEPAAPAEPPMMVSATEIASDYDDNEVAADQKYKGKMLEVSGNVARIDSGVGDKAIVQLVGKNEFQTVSAQGNNDFTQYATTLKKGQDIVLVCKGDGEVIGSPQLKNCQPK*	mmseqs_cdd	nonviral_gene	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0020	shell	direct	high	452	0.998	GCA_003443935.1_00879
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	955323	956123	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	12031	12831	GCA_003443935_1_1_875	GCA_003443935_1_1_875	+	1852323	.	PFAM:PF10547.8	P22_AR-protein	MSNISIFNFESTKQVRTAIRDGGDIWFCLPDVAGILAIKNSRDIVAKQLDKKGVEKIYTPTVGGQQELTFINEPNLYRVIFRSNKAEAVKFQNWVFDEVLPTIRKTGQYNTAQKATKDERKPLVQAVNMLVGETGAIYSNVWKMIHQRFDVGCVDELTGEQVYQAVEYVHGLILQHGKKPVDDVLLYKVLVDSAVYLRDYAVLIKQMRDIRFFDENMGKNMYNFVADNINDIVKLTHDMKLTNKNDRPMFEKNRINYYGGATLIYR*	common_virus_hmm	common_virus	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0021	shell	direct	high	800	0.999	GCA_003443935.1_00881
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	956281	956463	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	12989	13171	GCA_003443935_1_1_876	GCA_003443935_1_1_876	+	1852323	.	.	hypothetical protein	MQDNAKKSDATHHSAQLLRDMFSCLNQAMSRETEKFHQEQKKVKEEINRGARITNHRISL*	.	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0022	shell	direct	high	182	0.995	GCA_003443935.1_00882
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	956426	957262	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	13134	13970	GCA_003443935_1_1_877	GCA_003443935_1_1_877	+	1852323	.	.	hypothetical protein	MAQELPTTESLFDFLYLDSIKIRSFYAQLTGFGSLASIKANNALNSSLASEGAFGVNAMAKIDAKVNYATGENQSSEKTYDATPTLPREMIDKLDELGFISRELGENSAGNLVLLNGVLSITDIETLQNLLEPTMYFATEEEYKQLYGDRKRQAVKKKLEENKPVVQLIKAIPYALEARLKVGEDMVWMTLNRGEMVGNPHDINLKHGKVLFGEYYVLGVLDAIPNDDMNIDMTTGSFGDVILELSQSLKETMGRNTSSYGITPIAIFRVIRTNQQAK*	.	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0023	shell	direct	high	836	0.999	GCA_003443935.1_00883
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	957295	960999	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	14003	17707	GCA_003443935_1_1_878	GCA_003443935_1_1_878	+	1852323	.	UniProtKB:I6NKY8_9CAUD	Tail-tape-measure-	MGGFLLGEFMSNTYRLDIQVNADSANTALGNLKEHFDKIEQSSGKASVGINGFSDKADKASKSSKKAGDEAKKAGDGAKKFGDDAKKAGNDIDDLKHKADGLKTAFGTLKGVMFTAFAVAGVGGIIATADDMQTLTSQIKIATTSTKDYAHAMSEIERIAMGNMVSLDSVGQLYASNERSLKQLGKSQDEVIKFTENITTAMRVSGGSAESQAAALTQLGQAMASGVLRGDEFNSVAEQAPILMDLIAKEMGVTSNAVRELAKDGKITADVVYNAVAKATDSLSAMSAKMPTTVSQALQVIKNEYNYLIDDIMNQNSMMSQNIANAVLWAAEHFRTLVSAAAMVGAVWLGIIAKNSALVTSFVTLTGATLASTKASIANAFSVQGQITAYQVLELKILSLSTGLGFKIVKTIQATTNAVAYARSLVGLAKSFNTATAAARLHTLALAGVTTAKRRAMGVGILATRTITGLGGAFMSLGRIITAHPIIAIGAVLASVVVSTHGVTGAINSLSDAFGVVTLMAKDFIVFVGDGFSMAWDTVSAFADNMLAKVGDTTKGSTGAFSNFFATSHGGFVGMLQVAAKTFDLINAAAKAGAKNALHNFVQLGKTTKNIFLGIGNAFVSIIEMMINNAARKIDFLSTKANSMAKVLGIEASIPLIGTVSLGRLQYDNVDFGVAHTIKDNNTNSAYNYVTQLADKATQATKANASLADSYNSVGSAATNASDKTKKTADDITDAINELDALVAKLHHESHQLLNNSLSDMIFETDNKLGKFYEATQAQKQKLKDLAGQKDLYTATKKANDELKSLARTIKLVGKQTPFDELAHDLFDVRHEMSVLNGETKNNLLLWAANAENAKLAFELNQRSSQIKHDAMLSNHASSYQRELLNIERQINEEIQKYAGLKQDGTEHIYEQIKANLQLHATEQKKLATHKAYMQLVFDSRSEEEKRLDILDEQLTILAEQHRLYGTDVSAQSRQLMSELLDLPKPDSSAFDELNFEHETRLNRLGRFMDKQKQLYKDNEDALTQIAQEGVAARIAIDEAYQDAKRTLILSQSENIFESLASITKDSLGEQSRLYRAMFAMQQGFAIAQAGLAMQQAISKGLAKGFPEGLADMALAVGHGAKIVSAIKSVVMPVGQAHDGIMSVPKSGTWNLEKGERVLPRHTAQALDKKLDGMQNGNAGQVINVHVTVNSDGSNVQADTQMGKTMGEAMAKIARQVVIQESKQNGHLDRLYRR*	hallmark_hmm	common_virus	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0024	shell	direct	high	3704	1.0	GCA_003443935.1_00884
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	961071	961556	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	17779	18264	GCA_003443935_1_1_879	GCA_003443935_1_1_879	+	1852323	.	PFAM:PF05939.12	minor-tail-protein	MGDFITFLTYIESEKLTMAKFIILMITLVVLMLIYKAPDIYRVYKEFERKKTMKTFNWKMNMGASASVHHAVSKTQFGDGYAQRVSHGINNQRMDWSGSKTGDWQTVILPIKTFLDEHKGVIPFLWTNPHGDTLKYVCENYEISQKKGNFWEISLKFEQVF*	hallmark_hmm	common_virus	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0025	cloud	direct	high	485	0.998	GCA_003443935.1_00885
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	961660	962052	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	18368	18760	GCA_003443935_1_1_880	GCA_003443935_1_1_880	+	1852323	.	.	hypothetical protein	MSETTLTEVSRTEAQVLQSFIAQVDFWKNQHGDKAATIEITYYPEDDGFEVSNNEPNNGVLKRNRTTAFRADLLAWASNQLRQLQGWDNSQTVTAFILSFKDNRYGVRAALASETTDKADDGAEQAEQDK*	.	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0026	persistent	direct	high	392	0.997	GCA_003443935.1_00886
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	962151	962813	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	18859	19521	GCA_003443935_1_1_881	GCA_003443935_1_1_881	+	1852323	.	PFAM:PF05100.11	minor-tail-protein-	MSFNIDIQQTTVQGFITLYELDARKLGGEIYRFHGHNDGVIRWQGQDFHPIAIKADGLEMRSDGRASTPTLIIHNDIGGIPQALRFLCLKFGDFVGAKLKVIHTLAEYLTSADEQNFKIQNWYIEQKTSQTNVTTTFELSNPVDFEGQKIPVRQITSYCHWAVCGRYRGEECGYIGTNRFTTDGKPTDNPALDRCGGRMTECKLRDNEQRFGGFPAAGLV*	hallmark_hmm	common_virus	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0027	shell	direct	high	662	0.998	GCA_003443935.1_00887
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	962810	963013	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	19518	19721	GCA_003443935_1_1_882	GCA_003443935_1_1_882	-	1852323	.	.	hypothetical protein	MADKASPQARKKATANYFDKSLARIGLVISHTEPHVLDALNQIMAHKDCSKAMAIKIALVEYAKTLD*	.	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0028	shell	direct	high	203	0.995	GCA_003443935.1_00888
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	963396	964190	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	20104	20898	GCA_003443935_1_1_883	GCA_003443935_1_1_883	+	1852323	.	cd08073	Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation.  The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	MRLTKNLQQQIITHAQDVYPNECCGVIIDGQYHPCTNIAPNPANAFEIDTAEWVVLSNRGDIEAIVHSHPNGEPLPSEVDKVQMGLHDIDWVIVGLGHTPTGATYCDIKRHKPTTYQSPLLGREYYHGVQDCYSLVQDYYSRELDITLPSFARSDDWWENPNHEPLYENNFTKAGFIKVQDKNDLQKHDVILCRVGRTHHVNHALIWLGDDGALTSEKTPDCVGNALILHHPHGGLSVREIYGDSWQRRTAMVVRHQASNQTNL*	mmseqs_cdd	common_virus	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0029	shell	direct	high	794	0.999	GCA_003443935.1_00890
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	964170	964382	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	20878	21090	GCA_003443935_1_1_884	GCA_003443935_1_1_884	-	1852323	.	PFAM:PF15919.4	toxin-antitoxin-system-HicB-like	MVSLPPSVWVKVLLLNEMIAQNVSQAELAKRMGIVPQSLTRLVDLSHTTKIDTLANAFAKLGKQLQVGLV*	phrogs_hmm	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0030	shell	ambiguous	low	22	0.103	GCA_003443935.1_00890
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	964401	964583	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	21109	21291	GCA_003443935_1_1_885	GCA_003443935_1_1_885	-	1852323	.	COG1598	Predicted nuclease of the RNAse H fold, HicB family [Defense mechanisms]. 	MHYPVTLTPDTDGFCVTFRDIPEAISQGDTTDEALDMAQDALMVAMEFYFEDNRAVPMPS*	mmseqs_cdd	nonviral_gene	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0031	shell	direct	high	182	0.995	GCA_003443935.1_00891
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	964599	964805	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	21307	21513	GCA_003443935_1_1_886	GCA_003443935_1_1_886	+	1852323	.	.	hypothetical protein	MVKAITPDEIRAAGEQFKSHPENNAPATADKLIANKSGFVLSERSLKNLQMIIAPLPKQWHRQAVSWA*	.	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0032	.	unmatched_CDS	none	0	0	.
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	964775	964894	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	21483	21602	GCA_003443935_1_1_887	GCA_003443935_1_1_887	+	1852323	.	PDB:2MXZ_A	L-alanyl-D-glutamate-peptidase-endolysin	MAQASGKLGVNVRWGGAWMVITGKAGTPQEWVKAYRAGG*	common_virus_hmm	common_virus	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0033	.	unmatched_CDS	none	0	0	.
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	965219	966319	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	21927	23027	GCA_003443935_1_1_888	GCA_003443935_1_1_888	-	1852323	.	COG0842	ABC-type multidrug transport system, permease component [Defense mechanisms]. 	MRRFIKQYLTIWLDVIKDRSIFLTMVLSVVFYGFFYPFAYQAQRPADLPIVIVDEEQSPLTQAIIHTTSHTPNIHVLAVVSDFRQAQMLVQSAKADGILLLPNNLSQSIHHGQTGGVGLYLSSAYFLRTQNIGAGLVSSLQATIIQELGQVTQTRHKPMPELIHQSALFNPLSGYGSYIFPAVAPIIVYQTIVLGLAMLVAGYRQRLWRASACDFLAIYAVALTIGCLSCFYLFGFVFWWHDYPRGGNFWGMMLGVPIFVSCAIGVALLIASWVADGAKVGVLLIFSSVPLFMLTGLAYPLMAMPKFLQPLAHALPTTQGVQMFIQLNQMGVPIQDIWQKMAYLASVAVLCLGVAFWRLRLVNRSV*	mmseqs_cdd	nonviral_gene	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0034	persistent	direct	high	1100	0.999	GCA_003443935.1_00892
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	966319	967497	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	23027	24205	GCA_003443935_1_1_889	GCA_003443935_1_1_889	-	1852323	.	PF12698.7	ABC-2 family transporter protein	MIVRFIRAFCQAFLRELNRLSCNRFDLAMAMIAPLVIIVLFGAMFYHGKAHHLPVALVDEDNSELSHLIYQHIHHNETIKTVLILDNVQDAHHAINRLDVGGYIHIPKDAQNHLVRGENTGIHIAYNQSFFSIGSAISSALSKSTKGGIAKFIQTKHLTGVLPHLSGNMPHVKISVLFNPNLSYEFFLEPFLVAAVLHLLLCCLVAHAIGQEFHEHSVHEWLCHSPFGALFGKISVYVLIISLWHGLWQAWLIGVRGWFVAGSLFVLIIGQLLFYLAYALFGAMVVLKTQNINKSYGILAVYGGSSMSFAGVTLPLNNAPSFTQFWSQIIPFTPFARLQVEQWVIGSPFIITLAHLNSLLIFVLIFAIGSLLLLRRINKTLIAMPNTPKDDS*	hhsuite_tools	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0035	persistent	direct	high	1178	0.999	GCA_003443935.1_00893
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	967525	968688	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	24233	25396	GCA_003443935_1_1_890	GCA_003443935_1_1_890	-	1852323	.	COG1566	Multidrug resistance efflux pump [Defense mechanisms]. 	MTDKTDDVKPDTDGNHPKKQKPHTQAKSKPRPLALFLLLALIGSVLLVIIFGLIQSYGTPQNLPTANAIGSTNEPPKGVIAHLRQKITGPATFSIQGRVEGETVNISTKLPSRVAAIYVKEGQAVRAGEPLVQLISPEIDAKKQQAAAMLQSALAFQSSTDRGTRQENVDTLYANWQSAKAQATLAEESHRRGEYLYQEGVISRQRRDEMRAAKQSSAQIAQAAQQQYLKAQRGRTDELKSSADAQVQIARAAVAEADALDAETMLYAPIDGTVSKIYIQSSELVMPAVPVMSLLDNHPTITISVQENQYSHVHALPKLTGFIPALNKTADFKIVHTEDEGEFATIKNTRQTGGYDIHSFKTKLEPITPIEGLKVGMSVIFDITVLP*	mmseqs_cdd	nonviral_gene	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0036	persistent	direct	high	1163	0.999	GCA_003443935.1_00894
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	968735	970231	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	25443	26939	GCA_003443935_1_1_891	GCA_003443935_1_1_891	-	1852323	.	3PIK_A	Cation efflux system protein cusC	MSIKCQLVAIDNIIKPCYDKILNFVYFSTMKMPYFLLLGLLLAQQADADYSLLDAQKQLMSSSPAIQASHALYQADVLQAESLQKLHYPRISLNAHAFVLQQNSSIPLDHIKEQTAQHINTHFDHRFGSAPDGLLDALHDSTQTALDRLPDHQDVKLRHDGITPNITATMPIYTGGLISSSKNIANLQAQRGKFGLQERISLAKLNLIRHYFNVQLQKQLTDTQQNMLSAMQLHVDNAYKLEQQGFISRGQRMQFEVARNQVQRLYQSTQNQHQNSIYELAVLLGLPHIEPLSTPLFINTQHRPNWQALLKDSQNTPLNQKLKTDILLADENIALRQSTKKPKIAAVARYTLDDKPDWFAGVAVSYNLFLGIDRDKQIGAAHLQKQAAKLGHEQVNEHITTTMHTAYGEMVLAQKTHALLQQNHQAAKENLRIQTLSFQEGFGTVAGVVDAQSALSQIDSETALNAYRYLLALATLLHYTGTIDDFDDYLSLDDAHKL*	hhsuite_tools	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0037	persistent	direct	high	1496	0.999	GCA_003443935.1_00895
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	970493	974665	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	27201	31373	GCA_003443935_1_1_892	GCA_003443935_1_1_892	-	1852323	.	PDB:5XDR_A	Replicative-polyprotein	MHSTDNLPVLAKDRHYLNKLKQKMNSTTGDLKTKCKIRYDAIYERSAEQVANRMDSIPKNLSEKLNHDLPVTAEADTLIQAIRDHQVVIIAGETGSGKTTQLPKLAMMAGRGITGQIGHTQPRRLAARSVAMRIAEELGEPLGQTVSFKIRFTEEGGKHSIVKLMTDGILLAELGSDKFLANYDTIIIDEAHERSLNIDFIMGYLKRLLPKRPDLKVIITSATLDTQRFSDYFAANGKPAPVYIVEGRSYPVEVRYHPLTDTIVSSQDDDAFDDIEDNLPRALTAAVNECFEDARTKGHPDQADILIFAATEAEIRELQEVLMLYEPAHTEILPLFARQSYGEQQKIFAPSGKGRRIIIATNVAETALTVPNIRYVIDLGFARISRYNYRSRIQRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFNSRPEFTEPEILRTNLASVILQMERLQLGDVNAFDFITPPDLRLVNDGRKLLIELGALDDKSFTKTRARKGRTQLSSLTKIGQQMAKMPIDPRLARMLVAGDAFDCLADILIIVSALAVQDVRERPINKHAQADQKHALFRKEDSDFLFYLELFAALFDQHSTNDNQALSSNARRNFAKKHYLSYARIREWQKTHRQLSEMMAEMGFEINKQKNHQNGVKTDTKKGTRLSLKSGTSRQKSIKQALVGAKTLKHGTDDKTSIHYANIHRALLSALLSFVAHKTDTVGEYLMARSQKARIFPASTLHKKGAQWVMAFEVVETSQVYMRTLAKIEPEWIIKAAPNLLKYHYFEPHWSKKAGRVRAYAQISLFGLIVIAKELVNFEQIDLVQAREIFIRDALVANQYGMQMKFLADNANKIKDIERIEDKLRRRDLLVDEESLYQFYDAKIPNHIASRKSFEEFYHDAENKTPNFLHFSDEDVLNEAVDDSREFPESWHLGGVRLPLSYVFDPAADNDGVTVHVPIKALAQVDPVALLWGISGWRYELVLQLLKTLPKEIRRQIVPIPDTCQKIFHQLDASSKMGLLDQLVAALKTLGVQAHAQDFAPDKVEDYLRPLICVVDDKNRVIEKSRDLPKLQARHRKASVQSIAIEQGVHHHFPNHFNFVKNKHTSGIVMQEFSALKADAAQSAVFIATFTEMNAALAEHKKGVLTLIKGHLGAKQKQLTGQIDKAFKLAFAPLGDLEKLKNIVVHATLEACLYDYGPDFDHKPVSQHGDHARAAIAGLITQNNQWLISHLPLDEREFDDCQDLILKNFLLVGQEILRNLKEIYTAWQTARGKLLMLDQEIFGENIEDIEDQLDDLQLANFVYQTDYRHWRQYPRYLQALNIRLDRLQHNLEADLDAVYLLDAHMERLARCVKNPKFAEYRWLVEEYRINLFAQPMKTVQPVSAKRLETLWANLTTQ*	common_virus_hmm	common_virus	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0038	persistent	direct	high	4172	1.0	GCA_003443935.1_00896
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	974942	975631	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	31650	32339	GCA_003443935_1_1_893	GCA_003443935_1_1_893	+	1852323	.	TIGR02796	TolQ protein. TolQ is one of the essential components of the Tol-Pal system. Together with TolR, it harnesses protonmotive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this model describes specificially TolQ per se, as found in tol-pal operons. A close homolog, excluded from this model, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MNESISLISLVIEASVVVKLVMAILLLLSTISWVLIFHLGTKIGGIAKFDKRFERWFWTDDIDHQLSVVQAESERAGLELIFYTGFYDQNHQDQDSSLSDDKKVQIVERRLRMALGSEQVHLEKGLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQAESVGLATVAPSIAEALIATALGLFAAIPATMAYNHFATKSNTLYENRSLFCEGLISALVTNLAKKNTASTL*	mmseqs_cdd	nonviral_gene	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0039	persistent	direct	high	689	0.999	GCA_003443935.1_00897
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	975657	976091	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	32365	32799	GCA_003443935_1_1_894	GCA_003443935_1_1_894	+	1852323	.	TIGR02801	TolR protein. The model describes the inner membrane protein TolR, part of the TolR/TolQ complex that transduces energy from the proton-motive force, through TolA, to an outer membrane complex made up of TolB and Pal (peptidoglycan-associated lipoprotein). The complex is required to maintain outer membrane integrity, and defects may cause a defect in the import of some organic compounds in addition to the resulting morphologic. While several gene pairs homologous to talR and tolQ may be found in a single genome, but the scope of this model is set to favor finding only bone fide TolR, supported by operon structure as well as by score. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MVTSNRFARRQRPLNSDMNVVPYIDVMLVLLVIFIVTAPMLATGIEVSLPKEQTKPITQADKLPVIVSIQADGNLYVSHKNAIDVPITPDKLDTLLRQMHQDNTDLQVMVNADADNAYSRIMQIMALIQNVGITQVSLLSESVQ*	mmseqs_cdd	nonviral_gene	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0040	persistent	direct	high	434	0.998	GCA_003443935.1_00898
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	976122	976922	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	32830	33630	GCA_003443935_1_1_895	GCA_003443935_1_1_895	+	1852323	.	4G7X_B	Putative uncharacterized protein, TolA protein	MRLSDNHPTVNFDKSALILPILASVLLHTVIIIAVAAPLITPPTKPNTTIQTALVGQEAFNRAKTALSNHHANQNKPTATNTSSTITANDNDNAFMQAQNQHRYHPQVSTSATTTQAYHPPPNSAPFESNSPNIQNQPTNAHAKLAEYSNHVSDLEQSNHTESTPSRAQINAAITSVKHRIEAIWQRYPKQPNQTITFQVNMNQQGDVTSIQFGGGHPDLRESVEAAVYAAAPFYELGGMRDSIRLQFTTEQLIMDNNQTTNEPNH*	hhsuite_tools	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0041	persistent	direct	high	800	0.999	GCA_003443935.1_00899
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	976939	978201	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	33647	34909	GCA_003443935_1_1_896	GCA_003443935_1_1_896	+	1852323	.	TIGR02800	tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]	MKSPITKVCLALTISFSAALTHTYADDELIVISEQVAPSQYPVAVMPFSEAHQMSHYLSLAGLGTTHQNLPQHTQTNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEIIDTANGLVSVKHTQISDNHPASIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNKISSLKLIDPSGQLIRTLDTVNGSIITPTFSPDGLSIAYSVQTKNNLPIIYIVSVSGGTPKLVTPFWGHNLAPSFSPDGGSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPNYLADASGFIYTADKGTRRQSLYRYDFGTTHSTQIASYATNPRLSPDGSKLVYLSGGQIIIANTKGRIQQSFRVLGTDVSASFSPSGTRIIYTSNQGNKNQLMIRSLSSNAIRTIPTSGTVRDPIWSK*	mmseqs_cdd	nonviral_gene	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0042	persistent	direct	high	1262	0.999	GCA_003443935.1_00900
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	978201	978470	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	34909	35178	GCA_003443935_1_1_897	GCA_003443935_1_1_897	+	1852323	.	.	hypothetical protein	MPMSIPTKVTVGYTQRRLFMVSMTVGLISLSGCQHIQVTKSPIPIIIHSHTKSPSQPKPTPTDAVPTKNRPISPPTQKSNTIFILEDWF*	.	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0043	persistent	ambiguous	low	3	0.011	GCA_003443935.1_00901
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	978467	982021	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	35175	38729	GCA_003443935_1_1_898	GCA_003443935_1_1_898	-	1852323	.	PDB:5JXR_A	Chromatin-remodeling-complex-ATPase	MIDTFKPKLDLPTKANFKTTLPLLGGADLSFWLALAAKSEERLIVMIANHQNELNQLDTELSFFGIDAHVFPDWEILAYDQLSVHQDIISERIALLTRMPTTGVLLVSTQTLMQRIAPPSWLIGQHFDLAVGDKFDIHEQRLRLTKAGYVQTENVFEPGEFAVRGSIVDIFAVGQSLPFRLDLFDDNIETIKFFDPDSQRTLSDNDLAQLKKDAQAGMNTHHAQKLPSSAKITEFRLLPAREFPLEAGKEMFRQNFASLFPNASARKIEFYNDVMAAIAPQGIEFYAPLFFELDAWMKTGNLFSYLPDDTLVVSHDNLSACHDEYYQQIQARHHSRAHDKSLPIMPPDYLFLANNEFHQVLKAYPRVVINTNHDTAKIVAMESLPPPILPINHQAAKPLSELLSFIKSGQVPILLVAESAGRREIILELLKDKVAVKVVDNYQEFINNLDDFNTDCIALSVAPIERGLWLRDETGGLCIISETQIFGRQVLQTRRRRQSSVSQAFLIKSVTELTEGALVVHLEHGIGRYQGLVVLDVGEGEQEFIHLKYADDASIYVPITNLALIGRYSGSDLQTVSLSKIGSGKWEKAKLKALEQIHDVAAELLNVQARRNAKSGISFDIDMSQYELFASQFAFEETIDQAEAIHAVMHDMKQNKPMDRLICGDVGFGKTEVAMRAAFIAVQAGYQVAVLVPTTLLAGQHEDSFLNRFADWPIKIESLSRFGNKKHQDAILAGLADGTVDIVIGTHKLIQDDVKFKQLGLMIIDEEHRFGVRHKERIKALQTNIDSLSMTATPIPRTLNMALSGIQDISIIATPPARRLAIKTFLLPKSDETIKEAILREILRGGQVYYLHNDVASIEAAADTLRELVGEARVAVAHGQMNERELSVVMNDFYHKKFNVLVASTIIETGIDVPNANTIIIHRADKFGIAQLHQLRGRVGRSHHQAYCYLMVPSLKGLSSDAKKRLNAITRANTLGAGFMLASEDLEIRGAGEILGKEQSGNMQTIGFGLYMDMLERATNAIKQGKTPSLATPLDLVSDIDIHASALIPDEYLGDVHERLVFYKRISSLDDVNQLIDIRTEMIDRFGTLPTQTQNLFAVHRIRIRAKALGITKIDATQTTISIEFRADTPIDGLAIIKLIQSNDGYRMNGATAIRYTSQELMDTQARIDKVNELLLYFESTKTA*	common_virus_hmm	common_virus	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0044	persistent	direct	high	3554	1.0	GCA_003443935.1_00901
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	982026	982688	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	38734	39396	GCA_003443935_1_1_899	GCA_003443935_1_1_899	-	1852323	.	PRK00043	thiamine phosphate synthase. 	MTLQSIDKVPKLYLLTNDDELTTLLDKLERVFDTGAVSLLQVRRKSTLKLYDLATVYREAEMIVSLANDYDIKVVMNDSLELASHFGTGLHLGQRDGSVRVAREILGDHVVIGRTCHTDLALFKEAKREGATYGAMGTAFASITKPRAKIISKDILKKACELDFPLCVIGGITLENIHQLRDKLNGAAIDYIAVTADIMGHSVDTIADKCLAWQQKLNTW*	mmseqs_cdd	nonviral_gene	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0045	persistent	direct	high	662	0.998	GCA_003443935.1_00902
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	982842	983279	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	39550	39987	GCA_003443935_1_1_900	GCA_003443935_1_1_900	-	1852323	.	6AF2_A	HIT domain-containing protein	MFQLHPTLAKDTFLVGDFPLSTVRLMNDCQFPWLILVPRVSGIKEIYELSAADQVQFLRESSWVSSQMAKIFGADKMNVAALGNQVLQLHFHHIVRYQNDAAWPNPVWGHEAMPYTQEVLSHMQQTLMMALRGHHQMPFDWKMDV*	hhsuite_tools	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0046	persistent	direct	high	437	0.998	GCA_003443935.1_00903
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	983855	984052	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	40563	40760	GCA_003443935_1_1_901	GCA_003443935_1_1_901	+	1852323	.	PFAM:PF16777.4	transcriptional-regulator	MPKIVANPKTRAQIQKDSDARRGVKPIGFKVPIEFAELLDELAKQSGKTKNIIIMEAVELWAKQL*	phrogs_hmm	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0047	persistent	direct	high	197	0.995	GCA_003443935.1_00904
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	984430	984720	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	41138	41428	GCA_003443935_1_1_902	GCA_003443935_1_1_902	+	1852323	.	pfam15919	HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	MALECLDVHFSGLVADGEEIPLPTNFDAHTQNSQFDGMMWAWVAVDLSKYDVKSHKINITLPNHLIAKIDEKVAAHKSLYKSRSNYLAQLAMADLA*	mmseqs_cdd	nonviral_gene	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0048	shell	direct	high	290	0.997	GCA_003443935.1_00906
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	985123	985338	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	41831	42046	GCA_003443935_1_1_903	GCA_003443935_1_1_903	+	1852323	.	.	hypothetical protein	MTDSTTSPARQKATNTYRQKALANIALVISHTEPHALDALNQIMAHKDCSKAMAIKVALVEYANTLSQTSR*	.	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0049	shell	direct	high	215	0.995	GCA_003443935.1_00907
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	985454	985999	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	42162	42707	GCA_003443935_1_1_904	GCA_003443935_1_1_904	-	1852323	.	COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain [Translation, ribosomal structure and biogenesis]. 	MSQFSDALIHIVLFSPKIPNNTGSIIRLCANTGAQLHLVKPLGFELDDTRLKRAGLDYHEYATLSVHDNWQETKSALKSLGVERIVAMTTKFSRPFYEYQFKLDNDQHKVALVFGSETDGLPEEVRADIGANHWLRLPMLPDSRSLNLANSVGICLYEVWRQLGFVGDIGQSVGYHKPTSR*	mmseqs_cdd	nonviral_gene	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0050	persistent	direct	high	545	0.998	GCA_003443935.1_00908
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	986247	986387	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	42955	43095	GCA_003443935_1_1_905	GCA_003443935_1_1_905	+	1852323	.	COG5510	Predicted small secreted protein  [Function unknown]. 	MKKVLVASIAAVVVLTGCNAIKGFGKDVSKAGEAVSDTAQKVEKKI*	mmseqs_cdd	nonviral_gene	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0051	persistent	direct	high	140	0.993	GCA_003443935.1_00909
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	986469	987644	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	43177	44352	GCA_003443935_1_1_906	GCA_003443935_1_1_906	-	1852323	.	COG0635	Coproporphyrinogen III oxidase or related Fe-S oxidoreductase [Coenzyme transport and metabolism]. 	MYPDLLDPAHIPLSLYIHIPWCVKKCPYCDFNSHALPSQVPFENYIEALLSDAVSQQSLVSNRQIDTVFIGGGTPSLLPIESFKRLFDGLRLIYDFAPTCEITLEANPGTLEHSPFDEYLTIGINRLSIGVQSFDHNALTVLGRIHNPDQASNAIRAARIAGFDRVNADLMYGLPNQNPSKAVNDIQTAIDAGATHLSWYQLTIEPNTTFYRTPPQLPDEEIMAEIETLGQSVLTKHGFYNYEVSAWHGPNDAPCQHNLNYWQFGDYLAIGAGAHGKLTLKNHPDYQDGIYRYQKSRQPKDYLAFEDAPKMVNFERISDDNLPFEFMMNALRLKDGVSTDVFETRTGLLISTIDNEMLPLQHQGLMVLDPLRIAPTRLGFRYVNYLVSQFI*	mmseqs_cdd	nonviral_gene	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0052	persistent	direct	high	1175	0.999	GCA_003443935.1_00910
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	987658	988833	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	44366	45541	GCA_003443935_1_1_907	GCA_003443935_1_1_907	-	1852323	.	PDB:1OYW_A	ATP-dependent-DNA-helicase	MTETTVKNFDDLPLSEPILKAVQALKFDQLTPIQAQILPHTLANQDAIGQAQTGTGKTATFLITIIESLLKRPFQADEIRYLGEPRALVLAPTRELAQQILADCRELTRFSQLYNLCITGGSDFDKQLEQLHKRPLDILIGTPGRIIDWVNKGELFLDRVEVFVLDEADRMLDMGFIPDIKRIVRHMPSNTERQSLLFSATFNQDVMNLAYRWLHQPAFVEIAPESKTNQAIDQQFYLVTEREKTSALKQILADDSVKKTIIFANRKDQVKRLYDYLRRHHKVTMLSGDVAQQKRERYLQRFKDGEVNVLVATDVAGRGIHVDDVTHVINYTLPDMPDDYVHRIGRTGRAGLSGVSISFVSENDAFNLPALERHIDQKFKLNQFEFLDEHK*	common_virus_hmm	common_virus	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0053	persistent	direct	high	1175	0.999	GCA_003443935.1_00911
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	988864	989304	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	45572	46012	GCA_003443935_1_1_908	GCA_003443935_1_1_908	-	1852323	.	.	hypothetical protein	MMMKNKWMRGLAILVLSLPTVTYAKTAAPKASEAPEVSLTQEEQMAIDFCDFSAYGVMHIAGDHQGGATKSEALTNHDKRMAELKDLIDLDPETATMLDKYWKGAIDRIFQESVQKTDAEKQAFVMGVGESSFYSCLDQVLKTPKN*	.	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0054	persistent	direct	high	440	0.998	GCA_003443935.1_00912
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	989654	990532	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	46362	47240	GCA_003443935_1_1_909	GCA_003443935_1_1_909	+	1852323	.	TIGR02139	sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]	MLNQPIPLKNRARRVMPFFGLSMGISIFALGLLVILPFLMMILTTLQMSFDDIMQTIREPQVFAAIKLSLSMAMLATLTNLIFGTLAAWVLVRYEFWGKSFLNALVDLPFALPTAVTGIALATLYAPNGLFGQWFTHLGILLFNEPIKIAFTPIGIWLALVVVSFPFIVRAVQPVLAELSVEFEEAAAVMGAGRLTTFCRVILPEISPAMLIGAGMMFARATGEYGSVIFIAGNIPMQSEILPLIIVSKLEQFDVAGAACVSLFMLLISLVFLFIMNFIQWKLSARLGAKTN*	mmseqs_cdd	nonviral_gene	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0055	persistent	direct	high	878	0.999	GCA_003443935.1_00913
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	990577	991416	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	47285	48124	GCA_003443935_1_1_910	GCA_003443935_1_1_910	+	1852323	.	COG4208	ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]. 	MSHTSSYSYQKNPATRDKPWVRWSLIGIAVVFMGVMLVVPLVSVFYEALKEGWQAYQAALLEPDALASIKLTLITAAIILPINTIIGVALAYLITRHQFRGKFVITTLLDLPFAVSPVVAGLMFVLVFGANTRLGGYLESMGIQVIFATTGIVLATLFVTFAFIARELIPLMQAQGDSEEQAALTLGANGWQMFWKVTLPNIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLMIEIAYNEYAFTLAFALSSLLALLALITLVAQGLMSHKK*	mmseqs_cdd	nonviral_gene	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0056	persistent	direct	high	839	0.999	GCA_003443935.1_00914
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	991509	992228	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	48217	48936	GCA_003443935_1_1_911	GCA_003443935_1_1_911	+	1852323	.	COG1118	ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]. 	MSIKIQNIHKTFGDFVALGEISIDISTGELTTLLGPSGCGKTTLLRIIAGLENADNGRIYFDSIDVTDIPVQHRGIGFVFQQYALFRHQTVAQNIAFGLTLLPRNTRPSANTIDRRVDELLDLVQLSHTKTRYPHELSGGQRQRVALARALATEPKLLLLDEPFGALDAKVRKSLRDSLKDIQREIGITSILVTHDQEEAQAISDKIVIMNHGQIEQIGTPSKLFAQPSSDFVVDFLGL*	mmseqs_cdd	nonviral_gene	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0057	persistent	direct	high	719	0.999	GCA_003443935.1_00915
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	992270	993688	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	48978	50396	GCA_003443935_1_1_912	GCA_003443935_1_1_912	-	1852323	.	PDB:3BH0_A	Helicase-ATPase	MAKAKSSYICQNCGAIYGKWAGQCTDCGEWNTLVEAPNTSLPHHHKSKTTTAPRKTANYAGAVSAVMTLDHVGVTLETRMPTGIGEFDRVLGGGLVAGSVVLIGGDPGIGKSTILLQTAINMAAGDSLSGSALYITGEESLSQVAMRAVRLGLPTDRLRVLAETNVDTICAALTTEQPAIAVIDSIQTLFTEAIQSAPGGVAQIRESAAVLTRYAKQTGTALFLVGHVTKEGALAGPRVLEHMVDTVLYFEGESDSRFRMIRAIKNRFGAVNELGIFGMTDTGLKEVANPSAIFLSRYDKPIAGSVVMVSREGTRPLLVEVQALVDDSQGQPRRMALGLDYQRLSMLLAVMHRHGGIHTSGMDVYVNVVGGVKVMETGSDLAVLIACASSIKEKPLPVRLCVFGEVGLSGEIRPVPNGQERLKEAMKHGFTHAIVPRANAPAANHPQFKNIQIIAVDRLDEAIYQAFEINAG*	rep_hall_hmm	common_virus	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0058	persistent	direct	high	1418	0.999	GCA_003443935.1_00916
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	993986	995818	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	50694	52526	GCA_003443935_1_1_913	GCA_003443935_1_1_913	+	1852323	.	COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent [Energy production and conversion]. 	MTAKITAPDFVRHQALIHWVAEIAALTKPAAIEWCDGSEEENQRLIDLMIKNGTMIKLNEDKHPNSYLAFSDPTDVARVEDRTYICSKEEIDAGATNNWVEPSQMRTKLNDLFDGCMAGRTMYVVPFSMGPLGSHIAHIGIEITDSPYVVVSMRKMARMGKEVYDVLGADGEYVPCVHTVGSPLTEGQKDVAWPCNDDKYIVHFPETREIWSYGSGYGGNALLGKKCLALRIASAMGREQGWLAEHMLILGVTNPQGKKHYIAAAFPSACGKTNFAMLIPPAGYEGWKVETVGDDIAWIKPSEDGKLYAINPEAGFFGVAPGTNTKTNSNCMSTLGSDVIYTNVAVTDDGEVWWEGKTKETPANLTNWKREPHTGAERAAHANARFTVSAKQCPSIDPQWENPEGVPISAFIFGGRRADTVPLVSEAFDWVDGVYKAATMGSETTAAATGQQGVVRRDPFAMLPFTGYNMADYFNHWLQMGENLGKKAKAAGNQLPKMFKVNWFRRDTNGDFVWPGFGQNMRVLQWIIERCEGTANAVRTPIGLVPTYDDINWDQSDFTKAQFELVTSQDKDAWIKELESHAELFDKLGERMPTALKAHNAKLKADIEQA*	mmseqs_cdd	nonviral_gene	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0059	persistent	direct	high	1832	0.999	GCA_003443935.1_00917
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	995975	998845	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	52683	55553	GCA_003443935_1_1_914	GCA_003443935_1_1_914	-	1852323	.	PDB:5EMI_A	Cell-wall-hydrolase-autolysin	MKKHTKSSISTQILKPLSLAISSCILVACSSTGTPAKPVSQTPKPIPQAKPSQQINISSGNTNLGNTKTGADVDVLDVQMLDALEALLQATDMSMVEGDELAIQRYGNLWDRVRRGYRINEMTNARIEAQKSWFYTRQTYLDRLTARASRYLHHTVAEAERRGIPSELALLPIIESSYDPTATSNAAAAGLWQFIPSTGRIYGLNQSATYDGRRDVIESTRAAYDFLTSLYNQFGSWELALAAYNAGPGRVSRAIKANQDQGLPTDYWSLKLPTETMNYVPRFLAVAQIVRSPNTYGINLPAIANHSHFRTVPVNYGVSLSEVATVTGLSVSELRLLNPALLNFTVDEIGPNRIVIPDSLPNQIDNQLASLKGYGFGGDYIATAPAQSITYVVPKSGATANTSSQQELIAANTLPTTIAQVTPNNTIVQEPALSKSEINLIAAEIQKTSPEVPAISPQDGNIQLNAVQTGQSVLDARGETKMLSFADGPKTQAVAQQPTQPVQVAVTPPAQPVQITVVSPTPEPISQPKPQLPPVTASIPVVSSPPVLVPPPPSRPRPEPASRPKPKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKRQPVSAQTPSRQSTSTANTNSATHKVSAGESLTAIARKYNISLHALAKENGLSVTDGVLIGQTLKLPSDAKTANTTMANTSSSPSVNKPESYTVRAGDSLTSVAATHGLTVGQLASYNNLANDAHILIGQRLWLVAGKVKRQPVSAQQTSQATQSTKNNQSTATHRVQSGESLTAIARKYNISLHALAKENDLSVTDGVLIGQTLKLPSDAKAESSTPSRLGNTKNNSTRTPANTNIGITENYTVRSGDSLTMLSNRFGVAIGDLATANGLASNANLRIGQTLKVPKLTTTYTVKAGDGLIALARRYGISTQELAKMNNLEPTADLRIGQVLTVPNK*	common_virus_hmm	common_virus	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0060	persistent	direct	high	2870	1.0	GCA_003443935.1_00918
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	999040	999645	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	55748	56353	GCA_003443935_1_1_915	GCA_003443935_1_1_915	-	1852323	.	PF13474.6	SnoaL-like domain	MAYSFIDKYIEYKGWFMKYSTRSVLRKAVAASMLTAVIRSAIQLTGRSFGKGASIGLFIGMIGVQSLITTNAYAISEQDVSRYASSMSSAANAQNIAQISRLIDDDAIISLSRGGKTTSLDKEGYLQLLQKSWATSSDYRYRINVADVVVTGNQARAQIVTTETWTQDGKPVTIKTASRATFSQVGNNAVLLRSVSQVTVD*	hhsuite_tools	hypothetical_protein	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0061	persistent	direct	moderate	558	0.921	GCA_003443935.1_00919
GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote	cenote	CDS	999751	1000959	GCA_003443935.1	CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935.1_CP010900.1	GCA_003443935.1|CP010900.1	GCA_003443935_1_1	GCA_003443935_1_1@C60	56459	57667	GCA_003443935_1_1_916	GCA_003443935_1_1_916	-	1852323	.	COG4536	Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains [Inorganic ion transport and metabolism]. 	MPRPRTQNLANLSFVSIAIFTVSVAAIFIPSTAFAAFELGGTPTNLALLIFFICLSLVVSFLCSISEATLLTMTPSYIDTLEEDNPKGAALLKSVKVDHIEKSISAILTLNTVAHTLGSLGAGAQAVIVFGNAWFGVFSGVMTLIILIGTEIIPKTIGTVYWRRFAMPVAYYVRTINVALLPIIWVTEKISRMLTRGNQEIGFNRHEFLALANQGESLGQMSEMETRIIKNSLALGMINVEDILTPRSVVSAFDENMTVGDVFASYPKLPFSRFPIFDEDLDNATGFILKSDLLIAKANQEIHTPIKQFRRDINFVFAKMKLFDLLDLMLKEQVHIALAVGEFGEVKGLVSLEDVLETLLGLEIVDEFDRVDDMQILARQLMDKRMARLGAKLEEDAPFDEK*	mmseqs_cdd	nonviral_gene	C60	57667	943293	1000960	GCA_003443935.1|CP010900.1@region_943294_1000960@tool_cenote_CDS_0062	persistent	direct	high	1208	0.999	GCA_003443935.1_00920